View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4228_high_2 (Length: 544)
Name: NF4228_high_2
Description: NF4228
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4228_high_2 |
 | |
|
| [»] scaffold2006 (1 HSPs) |
| | |
|
| [»] scaffold0060 (1 HSPs) |
| | |
|
| [»] scaffold0070 (2 HSPs) |
| | |
|
| [»] scaffold0627 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 137 - 528
Target Start/End: Complemental strand, 19216658 - 19216267
Alignment:
| Q |
137 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacannnnnnnnnnaaa-taataataaaagtaactgaaaactcat |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
19216658 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacattttttaaaaaaaataataataaaagtaactgaaaactcat |
19216559 |
T |
|
| Q |
236 |
tgacttcaaagaaatgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggctt |
335 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
19216558 |
tgacttcaaaaaattgaataaataagtttctcttgaattttcagaatagtaaatcagagttgttttacatcaaaatataaaatt-ctaagaacaaggctt |
19216460 |
T |
|
| Q |
336 |
tctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggag |
435 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19216459 |
tccgcctttcactacccaaagacacatcctaactggtcataactttggacacttgtgagaaatctcaccaaggcgcaccaaaggtccacatatctcggag |
19216360 |
T |
|
| Q |
436 |
cctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttattt |
528 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
19216359 |
cctccaactgtaagtcattatcattatctgattttcaaatacggaaaagggtcaactcccaaacaaacaaatatacaagttatacatttattt |
19216267 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 285 - 494
Target Start/End: Complemental strand, 19592135 - 19591925
Alignment:
| Q |
285 |
taaatcagagttgttttacatcagaatataaaatttctaagaacaaggct-ttctgcctttcactacccaaagacacatcctagctggtcataactttgg |
383 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||| || |||| | || | | ||||| || |||| ||||| |||| || ||||||||||| | |
|
|
| T |
19592135 |
taaatcagagttgttttacatcgaaatataaaattcctaaaaataaggatcttatccttttcattatccaagaacacaccctaactcgtcataactttag |
19592036 |
T |
|
| Q |
384 |
acacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacggaaaa |
483 |
Q |
| |
|
| |||||||||| || ||||| | |||||||||| |||||||||||||| || |||| |||| || | |||||||| ||||| |||||| ||||| |
|
|
| T |
19592035 |
atgcttgtgagaactcatgccaagacgcaccaaaggttcacatatctcggagtcttcaaccgtaagtcgtgatcattatttgattccaaaatactgaaaa |
19591936 |
T |
|
| Q |
484 |
tagtcaactcc |
494 |
Q |
| |
|
|||||||||| |
|
|
| T |
19591935 |
gagtcaactcc |
19591925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 187
Target Start/End: Complemental strand, 19592308 - 19592265
Alignment:
| Q |
144 |
acccaaaatttgagagattaacttatgaaattcttagtgaaaaa |
187 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||||||||||| |
|
|
| T |
19592308 |
acccaatatttgagacatgaacttatgaaattcttagtgaaaaa |
19592265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 283; Significance: 1e-158; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 139 - 528
Target Start/End: Original strand, 37626382 - 37626773
Alignment:
| Q |
139 |
taacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacannnnnnnnnn--aaataataataaaagtaactgaaaactcatt |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
37626382 |
taacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacattttttttttttaaataataataaaagtacctgaaaactcatt |
37626481 |
T |
|
| Q |
237 |
gacttcaaagaaatgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggcttt |
336 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
37626482 |
gacttcaaaaaattgaataaataagtttctcttgaattttcagaatagtaaatcagagttgttttacatcaaaatataaaattcctaacaacaaggcttt |
37626581 |
T |
|
| Q |
337 |
ctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagc |
436 |
Q |
| |
|
| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
37626582 |
ccgcctttcactacctaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaacaaggcgcaccaaaggtccacatatctcggagc |
37626681 |
T |
|
| Q |
437 |
ctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttattt |
528 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37626682 |
ctccaaccgtaagtcattatcattatctgattttcaaatacggaaaagggtcaactcccaaacaaacaaatatacaagttatacatttattt |
37626773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 137 - 528
Target Start/End: Original strand, 37802922 - 37803313
Alignment:
| Q |
137 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacannnnnnnnnnaaataataataaaagtaactgaaaactcatt |
236 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37802922 |
tgtaacgaccaaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacatttttttttaaaataataataaaagtaactgaaaactcatt |
37803021 |
T |
|
| Q |
237 |
gacttcaaagaaatgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggcttt |
336 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
37803022 |
gacttcaaaaaattgaataaataagtttctcttgaattttcagaatagtaaattagagttgttttacatcaaaatataaaattcctaacaacaaggcttt |
37803121 |
T |
|
| Q |
337 |
ctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagc |
436 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||||| |
|
|
| T |
37803122 |
ccgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaacaaggcgcatcaaaggtctacatatctcggagc |
37803221 |
T |
|
| Q |
437 |
ctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttattt |
528 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
37803222 |
ctccaaccgtaagtcattatcattatctgattttcaaatacggaaaagggtcaacttccaaacaaacaaatatacaagttatacatttattt |
37803313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 222 - 523
Target Start/End: Original strand, 14275361 - 14275665
Alignment:
| Q |
222 |
aactgaaaactcattgacttcaaagaa-atgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaattt |
320 |
Q |
| |
|
|||||||||||||| | ||||||| | | ||||||| | ||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
14275361 |
aactgaaaactcataggcttcaaaatacacgaataaacaggtttctcttaaattttcaaaatagtaaatcagagttgttttacatca-aatataaaattc |
14275459 |
T |
|
| Q |
321 |
ctaagaacaaggctttctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggt |
420 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||| ||||||||||| |||||| |||||||||| |||| ||||| |||| | ||||| |||| ||||| |
|
|
| T |
14275460 |
ctaagaacaaggctttcagccttttactacccaagtacacatcctagttggtcaaaactttggacgcttgcgagaactctcgctaaggcgcaccgaaggt |
14275559 |
T |
|
| Q |
421 |
ccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacgg-aaaatagtcaactcccaaaca--aataaatatacaagtta |
517 |
Q |
| |
|
|||||| ||||| ||| || |||||||| | |||||||||||||||||||||||||| |||| ||||||||||||||| || ||| |||||||||| |
|
|
| T |
14275560 |
ccacatttctcgaagcttctaactgtaaattgatatcattatctgattttcaaatacggaaaaagggtcaactcccaaacaacaacaaacatacaagtta |
14275659 |
T |
|
| Q |
518 |
tacatt |
523 |
Q |
| |
|
||||| |
|
|
| T |
14275660 |
cacatt |
14275665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 14275271 - 14275328
Alignment:
| Q |
137 |
tgtaacgacccaaaattt-gagagattaacttatgaaattcttagtgaaaaagatgaa |
193 |
Q |
| |
|
|||||||||||||| ||| |||| |||||||||| | |||||||||||||||||||| |
|
|
| T |
14275271 |
tgtaacgacccaaatttttgagacattaacttatatatttcttagtgaaaaagatgaa |
14275328 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2006 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: scaffold2006
Description:
Target: scaffold2006; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 137 - 528
Target Start/End: Original strand, 725 - 1116
Alignment:
| Q |
137 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacannnnnnnnnnaaataataataaaagtaactgaaaactcatt |
236 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
725 |
tgtaacgaccaaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacatttttttttaaaataataataaaagtaactgaaaactcatt |
824 |
T |
|
| Q |
237 |
gacttcaaagaaatgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggcttt |
336 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||||||||| || |||||| ||||||||||||||||| ||||||||||| |||| ||||||||||| |
|
|
| T |
825 |
gacttcaaaaaattgaataaataagtttctcttgaattttcagaatagtaaataagagttgttttacatcaaaatataaaattcctaacaacaaggcttt |
924 |
T |
|
| Q |
337 |
ctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagc |
436 |
Q |
| |
|
| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| |||||||||||||| |
|
|
| T |
925 |
ccgcctttcactaccaaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaacaaggcgcaacaaaggtcaacatatctcggagc |
1024 |
T |
|
| Q |
437 |
ctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttattt |
528 |
Q |
| |
|
||||||| |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1025 |
ctccaaccgtaagtcattatcattatctgattttcaaatacggaaaagggtcaactaccaaacaaacaaatatacaagttatacatttattt |
1116 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 276; Significance: 1e-154; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 136 - 528
Target Start/End: Original strand, 19631893 - 19632286
Alignment:
| Q |
136 |
gtgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacannnnnnnnnnaaataataataaaagtaactgaaaactcat |
235 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
19631893 |
gtgtaacgacccaaaatttgagagattaacttaggaaattcttagtgaaaaatatgaacatttttttaagaaataataataaaagtaacagaaaactcat |
19631992 |
T |
|
| Q |
236 |
tgacttcaaagaaatgaa-taaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggct |
334 |
Q |
| |
|
|||||||||| | |||| |||||||||||||||||||| ||||| || ||| |||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
19631993 |
tgacttcaaaaagttgaaataaataagtttctcttgaatcttcagaatagtagatcagagttgttttacatcaaaatataaaattcctaagaacaaggct |
19632092 |
T |
|
| Q |
335 |
ttctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcgga |
434 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19632093 |
ttccgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgaaaaatctcaccaaggcgcaccaaaggtccacatatctcgga |
19632192 |
T |
|
| Q |
435 |
gcctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttattt |
528 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |
|
|
| T |
19632193 |
gcctccaactgtaagtcattatcattatctgattttcaaatacggaaaaaggtcaactcccaaacaaacaaatatacaagttatacatatattt |
19632286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 137 - 528
Target Start/End: Complemental strand, 2189011 - 2188620
Alignment:
| Q |
137 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacannnnnnnnnnaaataataataaaagtaactgaaaactcatt |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| || ||||| | ||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
2189011 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttggtaaaaaaaaagaacatttcttttaaaaataataataaaagtaattgaaaactcatt |
2188912 |
T |
|
| Q |
237 |
gacttcaaagaaatgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggcttt |
336 |
Q |
| |
|
||||| ||| || |||||||||||||||||||||||||||||| || | |||||| ||||||||||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
2188911 |
gacttaaaaaaattgaataaataagtttctcttgaattttcagaataggaaatcaaagttgttttacatcaaaatataaaattcctaagaacaaggcttt |
2188812 |
T |
|
| Q |
337 |
ctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagc |
436 |
Q |
| |
|
| |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
2188811 |
ccgcctttcactacccaacgacacttcctagctggtcataactttgaacacttgtgagaaatctcaccaaggcgcatcaaaggtccacatatctcggagc |
2188712 |
T |
|
| Q |
437 |
ctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttattt |
528 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| || | |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
2188711 |
ctccaactgtaagtcattatcattatctgattttcaaatacggaaaagtgttagctcccaaacaaacaaatatacaagttatacatttattt |
2188620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 286 - 525
Target Start/End: Original strand, 1607955 - 1608197
Alignment:
| Q |
286 |
aaatcagagttgttttacatcagaatataaaatttctaagaacaaggctttctgcctttcactacccaaagacacatcctagctggtcataactttggac |
385 |
Q |
| |
|
||||||| ||||||||||||| |||||| |||| ||||| ||||| | |||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
1607955 |
aaatcagtattgttttacatcaaaatatataattcttaagagtaaggcccttggcctttaactacccaaagacacaccctagctggtcataactttggac |
1608054 |
T |
|
| Q |
386 |
acttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacgg-aaaat |
484 |
Q |
| |
|
|||| ||||| |||| | || || |||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
1608055 |
gcttgcgagaactctcgctaaagcgcacccaaggtccacatcactctaagcctccaactgtaagtcattatcattatctgattttcaaatacggaaaaag |
1608154 |
T |
|
| Q |
485 |
agtcaactcccaaaca--aataaatatacaagttatacattta |
525 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
1608155 |
ggtcaactcccaaacaacaacaaatatacaagttatacattta |
1608197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 286 - 522
Target Start/End: Original strand, 20536570 - 20536808
Alignment:
| Q |
286 |
aaatcagagttgttttacatcagaatataaaatttctaagaacaaggctttctgcctttcactacccaaagacacatcctagctggtcataactttggac |
385 |
Q |
| |
|
||||||| |||||| |||||| |||||| |||| ||||| ||||| | |||||| |||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
20536570 |
aaatcagtattgtttaacatcaaaatatacaattcttaagagtaaggcccttggcctttaactacccaaagacacaccctagttggtcataactttggac |
20536669 |
T |
|
| Q |
386 |
acttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacggaaaata |
485 |
Q |
| |
|
|||| ||||| |||| | ||||| |||| ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
20536670 |
gcttgcgagaactctcgctaaggcgcacccaaggtccacatcactctaagcctccaactgtaagtcattatcattatctgattttcaaatacggaaaaaa |
20536769 |
T |
|
| Q |
486 |
-gtcaactcccaa-acaaataaatatacaagttatacat |
522 |
Q |
| |
|
|||||||||||| | |||||||||||||||||||||| |
|
|
| T |
20536770 |
ggtcaactcccaacaacaataaatatacaagttatacat |
20536808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 137 - 528
Target Start/End: Original strand, 41312920 - 41313313
Alignment:
| Q |
137 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaacannnnnnnnnnaa--ataataataaaagtaactgaaaactca |
234 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| | ||||||||||| | |
|
|
| T |
41312920 |
tgtaacgacccaaaatttgagagtttaacttatgaaattcttagtgaaaaagatgaacatattttaaaaaataataataataattgcaactgaaaactaa |
41313019 |
T |
|
| Q |
235 |
ttgacttcaaagaaatgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggct |
334 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
41313020 |
ttgacttcaaaaaattgaataaataagtttctcttgaattttcagaatagtaaatcagagttgttttacatcaaaatataaaattcctaagaacaaggct |
41313119 |
T |
|
| Q |
335 |
ttctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcgga |
434 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||| |
|
|
| T |
41313120 |
ttccgcctttcactacccaaagacacatcctagttggtcataactttggacacttgtgagaaatctcaacaaggcgcatcaaaggtccacatatctcgga |
41313219 |
T |
|
| Q |
435 |
gcctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttattt |
528 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
41313220 |
gcctccaactgtaagtcattattattatctgattttcaaatacggaaaagggtcaactcccaaacaaacaaatatacaagttatacatttattt |
41313313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 339 - 509
Target Start/End: Complemental strand, 20448383 - 20448215
Alignment:
| Q |
339 |
gcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcct |
438 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||| ||| |||| ||| | |||| | ||||| |||| || ||||| || |||| ||||| |
|
|
| T |
20448383 |
gcctttaactacccaaagacacaccctagctggtcataactttagacgcttgcgag-actctcgctaaggcgcacccaaagtccaaatcactcgaagcct |
20448285 |
T |
|
| Q |
439 |
ccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatat |
509 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
20448284 |
ccaactgtaagtcattatcattatct-aatttcaaatacggaaaagggtcaactcccaaacaaacaaatat |
20448215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 339 - 509
Target Start/End: Complemental strand, 20534150 - 20533982
Alignment:
| Q |
339 |
gcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcct |
438 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||| ||| |||| ||| | |||| | ||||| |||| || ||||| || |||| ||||| |
|
|
| T |
20534150 |
gcctttaactacccaaagacacaccctagctggtcataactttagacgcttgcgag-actctcgctaaggcgcacccaaagtccaaatcactcgaagcct |
20534052 |
T |
|
| Q |
439 |
ccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatat |
509 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||| |||||| |
|
|
| T |
20534051 |
ccaactgtaagtcattatcattatct-aatttcaaatacggaaaagggtcaactcccaaacaaacaaatat |
20533982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 227 - 528
Target Start/End: Complemental strand, 29823690 - 29823391
Alignment:
| Q |
227 |
aaaactcattgacttcaaagaaatgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaatttctaaga |
326 |
Q |
| |
|
||||||||||||||||| | | |||||||||||||||||||| ||| ||||| || |||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
29823690 |
aaaactcattgacttcagaaatttgaataaataagtttctcttaaatcttcagaatagtaaatcagagttgttttacatcaaaatataaaattcctaaga |
29823591 |
T |
|
| Q |
327 |
acaaggctttctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacat |
426 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
29823590 |
acaaagctttccgcctttcactacccaaagacacaccctagctggtcataactttggacacttgtgagaaatctcaccaaggcgcaccaaaggtccacat |
29823491 |
T |
|
| Q |
427 |
atctcggagcctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaacaaataaatatacaagttatacatttat |
526 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||| ||| |
|
|
| T |
29823490 |
atctcggagcctccaactgtaagtcattatcattatctgattttcaaatacggaaaagggtcaactcccaaacaaacaa--atacaagttatacatatat |
29823393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 339 - 527
Target Start/End: Original strand, 7093331 - 7093520
Alignment:
| Q |
339 |
gcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcct |
438 |
Q |
| |
|
|||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||| |||| | ||||| |||| || |||||||| |||| ||||| |
|
|
| T |
7093331 |
gcctttaactacccaaagacacaccctagctggtcataactttggacgcttgcgagac-tctcgctaaggcgcacctaaagtccacatcactcgaagcct |
7093429 |
T |
|
| Q |
439 |
ccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaaca--aataaatatacaagttatacatttatt |
527 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||| ||||| |||| |
|
|
| T |
7093430 |
ccaactgtaaatcattatcattatctgattttcaaatacggaaaagggtcaactcccaaacaacaacaaacatacaagttgtacatatatt |
7093520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 340 - 528
Target Start/End: Original strand, 451497 - 451688
Alignment:
| Q |
340 |
cctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcctc |
439 |
Q |
| |
|
||||| |||||||||||||||| |||| |||||||||||||||||| |||| ||||| |||| | ||||| ||| ||||||||||| ||| |||||| |
|
|
| T |
451497 |
cctttaactacccaaagacacaccctaactggtcataactttggacgcttgcgagaactctcgctaaggcggacccaaggtccacatcactctaagcctc |
451596 |
T |
|
| Q |
440 |
caactgtaactcattatcattatctgattttcaaatacgg-aaaatagtcaactcccaaaca--aataaatatacaagttatacatttattt |
528 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| |||| || |||||||||||| || ||||||||||||||||||| ||||| |
|
|
| T |
451597 |
caactgtaagtcattatcattatctgattttcaaatacggaaaaagggttaactcccaaacaacaacaaatatacaagttatacatatattt |
451688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 346 - 527
Target Start/End: Original strand, 7097072 - 7097253
Alignment:
| Q |
346 |
actacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcctccaactg |
445 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||| || |||| |||| |||| | |||| |||| || |||||||| |||| |||||||||||| |
|
|
| T |
7097072 |
actacccaaagacacaccctagctggtcataactttg-acgcttgcgagac-tctcgctaaggtgcacctaaagtccacatcactcgaagcctccaactg |
7097169 |
T |
|
| Q |
446 |
taactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaaca--aataaatatacaagttatacatttatt |
527 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || ||| ||||||||| ||||| |||| |
|
|
| T |
7097170 |
taaatcattatcattatctgattttcaaatacggaaaagggtcaactcccaaacaacaacaaacatacaagttgtacatatatt |
7097253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 29840802 - 29840745
Alignment:
| Q |
137 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaac |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
29840802 |
tgtaacgacccaaaatttgagagattaacttatgaaattcttcgtgaaaaagatgaac |
29840745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 396 - 502
Target Start/End: Original strand, 45462374 - 45462480
Alignment:
| Q |
396 |
aatctcaccaaggcacaccaaaggtccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactccc |
495 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||| || |||||||||| |||| || | |||| ||||||||| ||| | |||||| ||||||||| |
|
|
| T |
45462374 |
aatctcaccaaggcgcaccaaaggtccacatatcgcgaagcctccaaccgtaaatcgtgatcaatatctgattccaaaaaatggaaaaggatcaactccc |
45462473 |
T |
|
| Q |
496 |
aaacaaa |
502 |
Q |
| |
|
||||||| |
|
|
| T |
45462474 |
aaacaaa |
45462480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 114; Significance: 1e-57; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 222 - 501
Target Start/End: Original strand, 11991176 - 11991456
Alignment:
| Q |
222 |
aactgaaaactcattgacttcaaagaa-atgaataaataagtttctcttgaattttcaggatggtaaatcagagttgttttacatcagaatataaaattt |
320 |
Q |
| |
|
|||||||||||||| | ||||||| | ||||||||| | ||||||||| |||||||| || |||||||||||||||||||||||| ||||||||||| |
|
|
| T |
11991176 |
aactgaaaactcataggcttcaaaatacatgaataaacaggtttctcttaaattttcaaaatagtaaatcagagttgttttacatca-aatataaaattc |
11991274 |
T |
|
| Q |
321 |
ctaagaacaaggctttctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggt |
420 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||| ||||||||||||| |||| |||||||||| |||| ||||| |||| | ||||| |||| |||| |
|
|
| T |
11991275 |
ctaagaacaaggctttcgaccttttactacccaagtacacatcctagctagtcaaaactttggacgcttgcgagaactctcgctaaggcgcaccggaggt |
11991374 |
T |
|
| Q |
421 |
ccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacgg-aaaatagtcaactcccaaacaa |
501 |
Q |
| |
|
|||||| ||||| ||| ||||||||||| || ||||||||||| ||||| |||||||| |||| |||||||||||||||| |
|
|
| T |
11991375 |
ccacatctctcgaagcttccaactgtaaatcgatatcattatctaattttaaaatacggaaaaagggtcaactcccaaacaa |
11991456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 284 - 501
Target Start/End: Complemental strand, 639633 - 639416
Alignment:
| Q |
284 |
gtaaatcagagttgttttacatcagaatataaaatttctaagaacaaggctttctgcctttcactacccaaagacacatcctagctggtcataactttgg |
383 |
Q |
| |
|
||||||||| || || ||||| | ||||||||||| |||| |||||||||||| | |||||||||||||| |||||||||| | |||||||| ||||| |
|
|
| T |
639633 |
gtaaatcagtattattctacattaaaatataaaattcctaaaaacaaggctttcagactttcactacccaagtacacatcctaaccggtcataaatttgg |
639534 |
T |
|
| Q |
384 |
acacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacggaaaa |
483 |
Q |
| |
|
|| |||||| |||||||||||||||| |||||||||||||||||||||| |||||| ||| |||| || ||||| ||||||||||||||||||||||||| |
|
|
| T |
639533 |
acgcttgtgtgaaatctcaccaaggcgcaccaaaggtccacatatctcgaagcctcaaaccgtaagtcgttatctttatctgattttcaaatacggaaaa |
639434 |
T |
|
| Q |
484 |
tagtcaactcccaaacaa |
501 |
Q |
| |
|
| ||||||||||||| |
|
|
| T |
639433 |
agggtaactcccaaacaa |
639416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Original strand, 11991087 - 11991144
Alignment:
| Q |
137 |
tgtaacgacccaaaattt-gagagattaacttatgaaattcttagtgaaaaagatgaa |
193 |
Q |
| |
|
|||||||||||||| ||| |||| |||||||||| | |||||||||||||||||||| |
|
|
| T |
11991087 |
tgtaacgacccaaatttttgagacattaacttatacatttcttagtgaaaaagatgaa |
11991144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 98; Significance: 5e-48; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 32739694 - 32739795
Alignment:
| Q |
35 |
cacagatgcacattccaattccaaaccgacagtcacttgtaaaaatcacagcggtcgcacttgccttccctggtactggtttctgccaattttgttgtct |
134 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32739694 |
cacaaatgcacattccaattccaaaccgacagtcacttgtaaaaatcacagcggtcgcacttgccttccctggtactggtttctgccaattttgttgtct |
32739793 |
T |
|
| Q |
135 |
gg |
136 |
Q |
| |
|
|| |
|
|
| T |
32739794 |
gg |
32739795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 347 - 444
Target Start/End: Original strand, 30749722 - 30749818
Alignment:
| Q |
347 |
ctacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcctccaact |
444 |
Q |
| |
|
||||||||| ||||| ||||| || ||||||||||| || |||||||||| |||| |||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
30749722 |
ctacccaaa-acacaccctagatgatcataactttgaacgcttgtgagaactctctccaaggtgcaccaaaggtccacaaatctcagagcctccaact |
30749818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 30759986 - 30760078
Alignment:
| Q |
354 |
aagacacatcctagctggtcataactttggacacttgtgagaaatctcac--caaggcacaccaaaggtccacatatctcggagcctccaact |
444 |
Q |
| |
|
|||| ||| ||||| || |||||||||||||| |||||||||| |||| | ||||| ||||||||||||||| ||||| |||||||||||| |
|
|
| T |
30759986 |
aagatacaccctagatgatcataactttggacgcttgtgagaactctctctccaaggtgcaccaaaggtccacaaatctctgagcctccaact |
30760078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 339 - 527
Target Start/End: Complemental strand, 8378493 - 8378304
Alignment:
| Q |
339 |
gcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcct |
438 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||| |||| |||| |||| | ||||| |||| || |||||||| |||| ||||| |
|
|
| T |
8378493 |
gcctttaactacccaaagacacatcctagctggtcataactttggacgcttgcgagac-tctcgctaaggcgcacctaaagtccacatcactcgaagcct |
8378395 |
T |
|
| Q |
439 |
ccaactgtaactcattatcattatctgattttcaaatacggaaaatagtcaactcccaaaca--aataaatatacaagttatacatttatt |
527 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||| ||| || ||| ||||||||| ||||| |||| |
|
|
| T |
8378394 |
ccaactgtaagtcattatcattatctgattttcaaatacggaaaagggtcaattcccagacaacaacaaacatacaagttgtacatatatt |
8378304 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0060 (Bit Score: 86; Significance: 7e-41; HSPs: 1)
Name: scaffold0060
Description:
Target: scaffold0060; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 295 - 528
Target Start/End: Complemental strand, 17386 - 17150
Alignment:
| Q |
295 |
ttgttttacatcagaatataaaatttctaagaacaaggctttctgcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgag |
394 |
Q |
| |
|
||||||||||||| |||||| |||| ||||| ||||| | |||||| |||||||||||||||| |||| |||||||||| ||||||| |||| ||| |
|
|
| T |
17386 |
ttgttttacatcaaaatatataattcttaagagtaaggcccttggcctttaactacccaaagacacaccctaactggtcataattttggacgcttgcgag |
17287 |
T |
|
| Q |
395 |
aaatctcaccaaggcacaccaaaggtccacatatctcggagcctccaactgtaactcattatcattatctgattttcaaatacggaaaatag-tcaactc |
493 |
Q |
| |
|
|| |||| | ||||| |||| ||||||||||| ||| ||||||||| ||||| |||||||||| |||| |||||||||||||||||| | ||||||| |
|
|
| T |
17286 |
aactctcgctaaggcgcacccaaggtccacatcactctaagcctccaaatgtaagtcattatcatcatctaattttcaaatacggaaaaaggatcaactc |
17187 |
T |
|
| Q |
494 |
ccaaaca--aataaatatacaagttatacatttattt |
528 |
Q |
| |
|
||||||| || ||||||||||||||||||| ||||| |
|
|
| T |
17186 |
ccaaacaacaacaaatatacaagttatacatatattt |
17150 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 339 - 528
Target Start/End: Original strand, 58140 - 58332
Alignment:
| Q |
339 |
gcctttcactacccaaagacacatcctagctggtcataactttggacacttgtgagaaatctcaccaaggcacaccaaaggtccacatatctcggagcct |
438 |
Q |
| |
|
|||||| |||||||||||| ||| |||| | ||||||||||||||| |||| ||||| |||||| |||| |||| ||||||||||| || ||||| |
|
|
| T |
58140 |
gcctttaactacccaaagagacaccctaatttgtcataactttggacgcttgcgagaactctcactaaggtgcacccaaggtccacatcagtctaagcct |
58239 |
T |
|
| Q |
439 |
ccaactgtaactcattatcattatctgattttcaaatacgg-aaaatagtcaactcccaaaca--aataaatatacaagttatacatttattt |
528 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||| || ||||||||||||||||||| ||||| |
|
|
| T |
58240 |
ccaactgtaagtcattatcattatctgattttcaaatacggaaaaagggtcaactcccaaacaacaacaaatatacaagttatacatatattt |
58332 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 57919 - 57951
Alignment:
| Q |
137 |
tgtaacgacccaaaatttgagagattaacttat |
169 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
57919 |
tgtaacgacccaaaatttgagacattaacttat |
57951 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 2269 - 2328
Alignment:
| Q |
136 |
gtgtaacgacccaaaatttgagagattaacttatgaaattcttagtgaaaaagatgaaca |
195 |
Q |
| |
|
||||||| ||| ||| ||||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2269 |
gtgtaacaacctaaattttgagacattaacttatgaaattcttagtgaaaatgatgaaca |
2328 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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