View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4230_high_9 (Length: 386)
Name: NF4230_high_9
Description: NF4230
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4230_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 374; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 374; E-Value: 0
Query Start/End: Original strand, 3 - 380
Target Start/End: Original strand, 10465090 - 10465467
Alignment:
| Q |
3 |
ataatactcctcaaatttaatacaaaacctagctatccctacatttctttacattcccaaccaataatatttaagacttgggggccacaaaagggaaatt |
102 |
Q |
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| T |
10465090 |
ataatactcctcaaatttaatacaaaacctagctatccctacatttctttacattcccaaccaataatatttaagacttgggggccacaaaagggaaatt |
10465189 |
T |
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| Q |
103 |
cctgctgtagtgacccgtatgtatagacagaaagaacaacacctagagattccattttcaccatgttggtggcaagttctcaaattaatgaatgagctta |
202 |
Q |
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| T |
10465190 |
cctgctgtagtgacccgtatgtatagacagaaagaaccacacctagagattccattttcaccatgttggtggcaagttctcaaattaatgaatgagctta |
10465289 |
T |
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| Q |
203 |
aaaaatatcagcgtgagaagcacgaggtgtccacatatccgggaccaataaatgcatcccacatcatacaatattctacggctagcttgcttgattacac |
302 |
Q |
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| T |
10465290 |
aaaaatatcagcgtgagaagcacgaggtgtccacatatccgggaccaataaatgcatcccacatcatacaatattctacggctagcttgcttgattacac |
10465389 |
T |
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| Q |
303 |
ggggctccttagagtaaataaaggagaagaatatgtattgagaaaacgtactggtaagggtggattgaaggcaagtag |
380 |
Q |
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| T |
10465390 |
ggggctccttagagtaaataaaggagaagaatatgtattgagaaaacgtactggtaagggtggattgaaggcaagtag |
10465467 |
T |
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