View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4231_high_4 (Length: 250)
Name: NF4231_high_4
Description: NF4231
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4231_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 12 - 243
Target Start/End: Original strand, 42591386 - 42591617
Alignment:
| Q |
12 |
tactgaaagacaattagtacaatggcctgttgaagaattgaatgtactaagagagaaagaagttagtatgaacaatcaaaagtttgaaaagggtaatcat |
111 |
Q |
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| T |
42591386 |
tactgaaagacaattagtacaatggcctgttgaagaattgaatgtactaagagagaaagaagttagtatgaacaatcaaaagcttgaaaagggtaatcat |
42591485 |
T |
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| Q |
112 |
gttgaagtagctggaataactgctgcccaggtgggttaaacactttaatataagtaataagtgtcaaacttaaacattattcttttttataatatttagt |
211 |
Q |
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| T |
42591486 |
gttgaagtagctggaataactgctgcccaggtgggttaaacactttaatataagtaataagtgtcaaacttaaacattattcttttttataatatttagt |
42591585 |
T |
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| Q |
212 |
tgcaccttcaataattttatacacaatataaa |
243 |
Q |
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| T |
42591586 |
tacaccttcaataattttatacacaatataaa |
42591617 |
T |
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