View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4232_low_17 (Length: 249)
Name: NF4232_low_17
Description: NF4232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4232_low_17 |
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Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 7665342 - 7665571
Alignment:
| Q |
1 |
ttagaaacagatgcctcggggactggtgtgggggtggtgttgagtcaagggggtcaccctataacattcttttctataaagatggtacctagaatgcaac |
100 |
Q |
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| T |
7665342 |
ttagaaacagatgcctcggggactggtgtgggggtggtgttgagtcaagggggtcaccctataacattcttttctataaagatggtacctagaatgcaac |
7665441 |
T |
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| Q |
101 |
tccagtctacttatattagatagttctatgctataactgtagccttagcaaaatttcgccactatttgctaggccacaaatttataataagaacggatca |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7665442 |
tccagtctgcttatattagatagttctatgctataactgcagccttagcaaaatttcgccactatttgctaggccacaaatttataataagaacggatca |
7665541 |
T |
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| Q |
201 |
gaagagtttaaaaagcctgttggatcaatc |
230 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
7665542 |
gaagagtttaaaaagcctgttggatcaatc |
7665571 |
T |
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