View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4232_low_21 (Length: 238)
Name: NF4232_low_21
Description: NF4232
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4232_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 13 - 220
Target Start/End: Original strand, 401779 - 401986
Alignment:
| Q |
13 |
acagaaacaaatttaatgctacgtcaagcataagaatatcattcacaaaaataattgttataatttatatagagtgattcactcatcaaactataaataa |
112 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
401779 |
acagaaacaaatttaatgctacgtcaagcataagaatatcattcacaaaaataattgttataatttatatagagtgactcactcatcaaactataaataa |
401878 |
T |
|
| Q |
113 |
ttgaagtgtaggaagattgttannnnnnnaagaattttctataaaaaatagacaaaaaggtgaaattattacttacaggtatatagaattcatgaactgg |
212 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
401879 |
ttgaagtgtaggaagattgttatttttttaagaattttctataaaaaatagacaaaaaggtgaaattattactcacaggtatatagaattcatgaactgg |
401978 |
T |
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| Q |
213 |
tactcttg |
220 |
Q |
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|||||||| |
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| T |
401979 |
tactcttg |
401986 |
T |
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