View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4234_high_5 (Length: 268)
Name: NF4234_high_5
Description: NF4234
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4234_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 257
Target Start/End: Original strand, 46874218 - 46874456
Alignment:
| Q |
19 |
ctaagaccccaacttgaagtcaatagtagattgtggagttaaattattctcaatcagcgcaaagccctcatttcttgtgaggagctccaacttttttact |
118 |
Q |
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| T |
46874218 |
ctaagaccccaacttgaagtcaatagtagattgtggagttaaattattctcaatcagtgcaaagccctcatttcttgtgaggagttccaacttttttact |
46874317 |
T |
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| Q |
119 |
tgtaaaggttcttttatatctttgattttatctgtcaattcttaatcaacaatagattttgaacctcttttgtcatcccttttgagaatgcttttctctt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46874318 |
tgtaaaggttcttttatatctttgattttatctgtcaattcttaatcaacaatagattttgaacctcttttgtcatcccttttgagaatgcttttctctt |
46874417 |
T |
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| Q |
219 |
tattcactgttataatcgaagtagtgcctatagcccttt |
257 |
Q |
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|||||||||||||||||||||||||||||||||| |||| |
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| T |
46874418 |
tattcactgttataatcgaagtagtgcctatagctcttt |
46874456 |
T |
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