View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4237_low_9 (Length: 291)
Name: NF4237_low_9
Description: NF4237
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4237_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 263; Significance: 1e-147; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 263; E-Value: 1e-147
Query Start/End: Original strand, 21 - 283
Target Start/End: Complemental strand, 26599942 - 26599680
Alignment:
| Q |
21 |
agtacaattatcagaacctctcacagtactattcaagatttcactcccatcttcattttgattttgaatctctgctccagttattacatttacaccctta |
120 |
Q |
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| T |
26599942 |
agtacaattatcagaacctctcacagtactattcaagatttcactcccatcttcattttgattttgaatctctgctccagttattacatttacaccctta |
26599843 |
T |
|
| Q |
121 |
tgatcatgagcttcttcaaccttaaccatttctctacctcctaaattcttcaaagcttccattaaagcagcatcccttgcttcaatccatgctctctcat |
220 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26599842 |
tgatcatgagcttcttcaaccttaaccatttctctacctcctaaattcttcaaagcttccattaaagcagcatcccttgcttcaatccatgctctctcat |
26599743 |
T |
|
| Q |
221 |
tactccaaaacttttgttctttttctacccttttggcctcttgtttcctccactcttcttctc |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26599742 |
tactccaaaacttttgttctttttctacccttttggcctcttgtttcctccactcttcttctc |
26599680 |
T |
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