View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4238_high_4 (Length: 459)

Name: NF4238_high_4
Description: NF4238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4238_high_4
NF4238_high_4
[»] chr6 (27 HSPs)
chr6 (198-459)||(3949297-3949558)
chr6 (198-432)||(25167833-25168067)
chr6 (19-178)||(31976271-31976430)
chr6 (19-174)||(11427641-11427796)
chr6 (19-174)||(32869701-32869856)
chr6 (19-182)||(31952944-31953107)
chr6 (19-179)||(30341277-30341437)
chr6 (19-182)||(15507938-15508101)
chr6 (19-178)||(15989960-15990119)
chr6 (19-178)||(4231571-4231730)
chr6 (19-174)||(17598577-17598732)
chr6 (19-174)||(22880580-22880735)
chr6 (23-174)||(29857854-29858005)
chr6 (19-178)||(31110679-31110836)
chr6 (19-176)||(28536408-28536563)
chr6 (293-432)||(10990014-10990153)
chr6 (293-432)||(4263360-4263496)
chr6 (27-156)||(23128067-23128196)
chr6 (40-174)||(15832621-15832755)
chr6 (40-180)||(12732526-12732665)
chr6 (26-138)||(9379670-9379782)
chr6 (19-70)||(31109426-31109477)
chr6 (27-138)||(946407-946518)
chr6 (19-138)||(6209423-6209542)
chr6 (39-117)||(30870057-30870135)
chr6 (22-66)||(7367672-7367715)
chr6 (22-66)||(26669943-26669986)
[»] chr4 (44 HSPs)
chr4 (198-432)||(37049990-37050225)
chr4 (12-176)||(29977901-29978065)
chr4 (26-174)||(23608265-23608413)
chr4 (19-179)||(50052345-50052505)
chr4 (19-182)||(29239909-29240072)
chr4 (19-179)||(50526088-50526248)
chr4 (19-174)||(6034067-6034222)
chr4 (19-174)||(41236370-41236525)
chr4 (44-175)||(56300086-56300217)
chr4 (19-180)||(31910215-31910376)
chr4 (37-178)||(41823923-41824064)
chr4 (22-174)||(48182971-48183123)
chr4 (19-178)||(50813810-50813969)
chr4 (19-180)||(28480184-28480345)
chr4 (19-180)||(28481059-28481220)
chr4 (19-180)||(28481934-28482095)
chr4 (19-179)||(29547876-29548036)
chr4 (19-174)||(42044289-42044444)
chr4 (19-181)||(17983658-17983820)
chr4 (19-181)||(19670631-19670793)
chr4 (19-176)||(40574802-40574959)
chr4 (25-181)||(29589655-29589811)
chr4 (19-174)||(11511385-11511539)
chr4 (19-138)||(480405-480524)
chr4 (19-186)||(18924405-18924572)
chr4 (23-174)||(24995029-24995180)
chr4 (28-106)||(18769037-18769115)
chr4 (245-433)||(16832082-16832271)
chr4 (40-137)||(47104588-47104685)
chr4 (19-183)||(47986231-47986394)
chr4 (248-432)||(24239788-24239970)
chr4 (19-158)||(54473471-54473610)
chr4 (19-178)||(55475214-55475373)
chr4 (19-117)||(3481677-3481775)
chr4 (28-117)||(18769141-18769230)
chr4 (359-432)||(19852474-19852547)
chr4 (205-372)||(18522202-18522369)
chr4 (26-117)||(48647705-48647796)
chr4 (359-432)||(16593826-16593899)
chr4 (23-136)||(29234205-29234318)
chr4 (19-66)||(32766981-32767028)
chr4 (19-117)||(55079692-55079791)
chr4 (19-117)||(44536725-44536822)
chr4 (44-117)||(29535425-29535497)
[»] chr2 (44 HSPs)
chr2 (198-432)||(37344609-37344843)
chr2 (19-174)||(28863478-28863633)
chr2 (19-179)||(40613819-40613979)
chr2 (23-174)||(7465657-7465808)
chr2 (23-174)||(17473047-17473198)
chr2 (18-138)||(17819962-17820082)
chr2 (234-432)||(31092306-31092505)
chr2 (19-179)||(42257216-42257376)
chr2 (19-174)||(19930742-19930897)
chr2 (247-432)||(14296202-14296388)
chr2 (22-178)||(20700841-20700997)
chr2 (22-179)||(2533150-2533306)
chr2 (301-430)||(18811704-18811833)
chr2 (19-167)||(33436029-33436177)
chr2 (19-158)||(9058503-9058642)
chr2 (19-174)||(13438366-13438521)
chr2 (46-156)||(3154193-3154303)
chr2 (26-178)||(36168866-36169018)
chr2 (19-174)||(10249304-10249459)
chr2 (19-174)||(28381577-28381732)
chr2 (19-181)||(2997402-2997564)
chr2 (23-138)||(38273100-38273215)
chr2 (18-177)||(44151945-44152108)
chr2 (19-179)||(17823807-17823971)
chr2 (19-174)||(30915486-30915641)
chr2 (19-174)||(32505570-32505725)
chr2 (26-181)||(38732384-38732539)
chr2 (19-174)||(40701501-40701656)
chr2 (19-178)||(43490144-43490303)
chr2 (19-180)||(3440002-3440163)
chr2 (19-99)||(5574485-5574565)
chr2 (22-174)||(15428663-15428814)
chr2 (23-179)||(13365380-13365536)
chr2 (19-179)||(45097652-45097812)
chr2 (19-174)||(4060708-4060863)
chr2 (19-70)||(26891530-26891581)
chr2 (329-418)||(8413844-8413933)
chr2 (293-399)||(18693124-18693230)
chr2 (80-181)||(21301415-21301516)
chr2 (22-64)||(27864730-27864772)
chr2 (27-116)||(41575168-41575258)
chr2 (50-181)||(41758639-41758772)
chr2 (22-66)||(16096871-16096914)
chr2 (22-66)||(42849793-42849836)
[»] chr5 (35 HSPs)
chr5 (17-183)||(6259914-6260080)
chr5 (198-390)||(32278607-32278794)
chr5 (19-177)||(6679721-6679879)
chr5 (19-180)||(26720539-26720700)
chr5 (19-180)||(26990288-26990449)
chr5 (255-430)||(788228-788403)
chr5 (19-174)||(18520806-18520961)
chr5 (19-174)||(2740297-2740452)
chr5 (19-135)||(28177798-28177914)
chr5 (19-174)||(14831837-14831992)
chr5 (19-166)||(36732872-36733019)
chr5 (19-174)||(40145430-40145585)
chr5 (19-180)||(3921181-3921342)
chr5 (17-138)||(39557475-39557596)
chr5 (19-179)||(2252085-2252245)
chr5 (19-178)||(15409528-15409687)
chr5 (19-174)||(33149560-33149715)
chr5 (247-432)||(35811120-35811305)
chr5 (19-176)||(35943812-35943969)
chr5 (40-179)||(31009032-31009171)
chr5 (19-174)||(35785222-35785377)
chr5 (19-169)||(13811675-13811825)
chr5 (289-423)||(36868291-36868425)
chr5 (19-136)||(16327924-16328041)
chr5 (293-432)||(19215372-19215511)
chr5 (19-177)||(33825243-33825401)
chr5 (19-117)||(42414281-42414379)
chr5 (19-113)||(38296226-38296320)
chr5 (22-179)||(39688814-39688971)
chr5 (27-117)||(9603844-9603934)
chr5 (40-178)||(21370048-21370186)
chr5 (236-352)||(37307134-37307251)
chr5 (22-86)||(33801572-33801635)
chr5 (19-55)||(36875644-36875680)
chr5 (392-432)||(37307257-37307297)
[»] chr3 (50 HSPs)
chr3 (19-183)||(26141443-26141609)
chr3 (17-178)||(25407065-25407227)
chr3 (19-174)||(49607437-49607592)
chr3 (19-182)||(20764829-20764992)
chr3 (19-187)||(33118759-33118928)
chr3 (19-174)||(53982034-53982189)
chr3 (23-181)||(47531892-47532050)
chr3 (21-174)||(33644225-33644378)
chr3 (234-417)||(29346803-29346987)
chr3 (19-181)||(13897970-13898132)
chr3 (19-181)||(41189679-41189841)
chr3 (26-180)||(51419276-51419430)
chr3 (19-179)||(8076416-8076576)
chr3 (19-178)||(11347840-11347999)
chr3 (19-178)||(14623757-14623916)
chr3 (19-187)||(26754718-26754886)
chr3 (19-174)||(17470428-17470583)
chr3 (245-422)||(35526503-35526681)
chr3 (17-174)||(31456710-31456867)
chr3 (19-178)||(36331247-36331406)
chr3 (19-174)||(52629323-52629478)
chr3 (298-432)||(16893067-16893201)
chr3 (23-181)||(24699870-24700027)
chr3 (301-430)||(51524859-51524988)
chr3 (22-181)||(35536652-35536811)
chr3 (19-174)||(54868817-54868972)
chr3 (27-181)||(30801648-30801802)
chr3 (17-182)||(1758373-1758537)
chr3 (19-174)||(36707350-36707501)
chr3 (19-176)||(48375626-48375783)
chr3 (50-174)||(9563053-9563177)
chr3 (19-70)||(11095379-11095430)
chr3 (19-178)||(35093608-35093767)
chr3 (22-180)||(42823137-42823295)
chr3 (19-99)||(27714888-27714968)
chr3 (357-432)||(31067165-31067241)
chr3 (19-99)||(48587088-48587168)
chr3 (22-117)||(25395312-25395407)
chr3 (357-432)||(26796875-26796950)
chr3 (19-113)||(11907394-11907488)
chr3 (79-181)||(43746422-43746524)
chr3 (77-178)||(21746106-21746207)
chr3 (19-180)||(45058469-45058629)
chr3 (25-117)||(41080737-41080828)
chr3 (27-178)||(35965700-35965843)
chr3 (198-260)||(49106934-49106995)
chr3 (34-86)||(25413784-25413836)
chr3 (69-113)||(32605897-32605941)
chr3 (22-86)||(47190960-47191023)
chr3 (22-66)||(53581792-53581835)
[»] chr1 (43 HSPs)
chr1 (19-178)||(32813270-32813429)
chr1 (19-178)||(51898601-51898760)
chr1 (19-174)||(37649221-37649376)
chr1 (234-432)||(13061893-13062092)
chr1 (23-174)||(41758832-41758983)
chr1 (208-409)||(14344068-14344267)
chr1 (19-164)||(38632253-38632398)
chr1 (19-174)||(9474798-9474953)
chr1 (19-174)||(27564657-27564812)
chr1 (19-181)||(45044475-45044637)
chr1 (19-174)||(2581938-2582093)
chr1 (19-174)||(3000342-3000497)
chr1 (19-174)||(38595177-38595332)
chr1 (19-174)||(48716204-48716359)
chr1 (26-180)||(26440764-26440908)
chr1 (19-174)||(47452242-47452397)
chr1 (293-418)||(3374307-3374432)
chr1 (19-178)||(37926356-37926515)
chr1 (22-178)||(44454005-44454165)
chr1 (19-178)||(50590918-50591077)
chr1 (22-180)||(5958916-5959074)
chr1 (294-432)||(17114707-17114844)
chr1 (19-176)||(49811447-49811604)
chr1 (287-432)||(50903467-50903612)
chr1 (26-174)||(43162-43310)
chr1 (201-286)||(44163661-44163744)
chr1 (19-167)||(50630481-50630629)
chr1 (40-179)||(3302450-3302589)
chr1 (357-430)||(41035080-41035153)
chr1 (19-180)||(47748466-47748626)
chr1 (295-432)||(49491873-49492009)
chr1 (19-178)||(41608411-41608570)
chr1 (19-130)||(44548342-44548453)
chr1 (22-86)||(750239-750302)
chr1 (19-99)||(8346385-8346465)
chr1 (19-178)||(6260893-6261052)
chr1 (357-432)||(19394182-19394257)
chr1 (19-181)||(11152293-11152455)
chr1 (26-99)||(13414791-13414864)
chr1 (22-174)||(26274458-26274607)
chr1 (22-66)||(4401451-4401494)
chr1 (22-66)||(7447948-7447991)
chr1 (22-66)||(50448194-50448237)
[»] chr8 (40 HSPs)
chr8 (23-179)||(43414498-43414654)
chr8 (19-177)||(5957853-5958011)
chr8 (19-178)||(37038502-37038661)
chr8 (19-179)||(15048098-15048258)
chr8 (19-174)||(14547945-14548100)
chr8 (298-430)||(27786783-27786915)
chr8 (19-175)||(40423864-40424020)
chr8 (19-178)||(4854781-4854940)
chr8 (19-178)||(8841350-8841509)
chr8 (19-174)||(12831070-12831225)
chr8 (19-174)||(15197356-15197511)
chr8 (234-432)||(29369093-29369292)
chr8 (19-174)||(34012218-34012373)
chr8 (19-174)||(34307239-34307394)
chr8 (40-174)||(9122229-9122363)
chr8 (19-174)||(504043-504198)
chr8 (19-166)||(1179870-1180017)
chr8 (22-174)||(23122519-23122671)
chr8 (26-178)||(10284549-10284701)
chr8 (19-179)||(42221538-42221698)
chr8 (19-138)||(16383400-16383519)
chr8 (19-117)||(10621066-10621164)
chr8 (19-176)||(17443848-17444005)
chr8 (360-432)||(399778-399850)
chr8 (19-174)||(24307715-24307870)
chr8 (50-181)||(42354503-42354634)
chr8 (19-174)||(44507010-44507164)
chr8 (26-175)||(16056322-16056471)
chr8 (344-432)||(8831264-8831352)
chr8 (357-429)||(36206475-36206547)
chr8 (19-178)||(32032748-32032906)
chr8 (23-180)||(15258845-15259002)
chr8 (82-177)||(25838275-25838370)
chr8 (19-174)||(30479396-30479551)
chr8 (103-174)||(42710216-42710287)
chr8 (22-86)||(2547099-2547162)
chr8 (357-432)||(28225768-28225843)
chr8 (34-86)||(2165908-2165960)
chr8 (19-59)||(24307652-24307692)
chr8 (22-66)||(29705485-29705528)
[»] scaffold1268 (1 HSPs)
scaffold1268 (19-177)||(848-1006)
[»] scaffold1267 (1 HSPs)
scaffold1267 (19-177)||(848-1006)
[»] chr7 (45 HSPs)
chr7 (198-363)||(34547939-34548104)
chr7 (22-181)||(35522902-35523061)
chr7 (19-178)||(46033719-46033878)
chr7 (26-177)||(16374743-16374894)
chr7 (19-174)||(19329865-19330020)
chr7 (23-174)||(4999436-4999587)
chr7 (19-174)||(7389412-7389566)
chr7 (19-174)||(8080305-8080460)
chr7 (19-181)||(32564341-32564503)
chr7 (19-178)||(22343384-22343543)
chr7 (19-174)||(38837240-38837395)
chr7 (19-117)||(18207203-18207300)
chr7 (19-179)||(31735907-31736060)
chr7 (19-176)||(41915764-41915921)
chr7 (19-159)||(3784018-3784158)
chr7 (19-179)||(21234424-21234584)
chr7 (19-147)||(35137556-35137684)
chr7 (19-181)||(8238236-8238398)
chr7 (19-147)||(3694390-3694518)
chr7 (325-417)||(19407866-19407958)
chr7 (17-177)||(2318160-2318322)
chr7 (297-432)||(26449531-26449666)
chr7 (19-174)||(40957730-40957885)
chr7 (19-169)||(19436114-19436264)
chr7 (19-99)||(3434585-3434665)
chr7 (26-174)||(32951415-32951563)
chr7 (19-99)||(36361910-36361990)
chr7 (26-174)||(38267070-38267218)
chr7 (19-178)||(26296667-26296826)
chr7 (19-178)||(38044220-38044379)
chr7 (27-178)||(41423713-41423864)
chr7 (19-90)||(46374808-46374879)
chr7 (19-117)||(39255903-39256000)
chr7 (19-181)||(40846028-40846190)
chr7 (19-99)||(36362049-36362129)
chr7 (120-179)||(46374741-46374800)
chr7 (19-176)||(7727929-7728086)
chr7 (198-313)||(16099673-16099785)
chr7 (368-432)||(33191268-33191332)
chr7 (22-66)||(38160513-38160556)
chr7 (42-180)||(27744225-27744363)
chr7 (19-117)||(36208196-36208294)
chr7 (40-177)||(32045881-32046018)
chr7 (22-66)||(32029751-32029794)
chr7 (22-66)||(43317566-43317609)
[»] scaffold0018 (1 HSPs)
scaffold0018 (21-177)||(152523-152679)
[»] scaffold0237 (1 HSPs)
scaffold0237 (23-174)||(4056-4207)
[»] scaffold0531 (1 HSPs)
scaffold0531 (357-432)||(10249-10324)
[»] scaffold0110 (1 HSPs)
scaffold0110 (46-180)||(8779-8913)
[»] scaffold0321 (1 HSPs)
scaffold0321 (19-174)||(10031-10186)
[»] scaffold0316 (2 HSPs)
scaffold0316 (17-99)||(17075-17157)
scaffold0316 (103-181)||(17210-17288)
[»] scaffold0119 (1 HSPs)
scaffold0119 (22-66)||(808-851)


Alignment Details
Target: chr6 (Bit Score: 171; Significance: 1e-91; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 198 - 459
Target Start/End: Complemental strand, 3949558 - 3949297
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 296  Q
    ||||||||||||||||||||||| |||||| |||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  3949558 tcaaaagtatgaccattcttggccaaataacgactgaaa-gactactccctctaagaaaatttgaacaaaagtattggtattctcagatattctgttgca 3949460  T
Q  297 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 396  Q
    |||||| |||||||||||||||| |||||||||||||||| ||||| || ||| ||| | ||||||||| |||| ||||||||||| |||||||||||||    
T  3949459 attgaatcaactattctgcatctgtcaaggcggctttggaggtacccttctgaacacgagtcctcattctggctcagttaaaactaaaaagcttcacttt 3949360  T
Q  397 gttcacctgtttcttcttctttctctctgccttagttggactattatcatcatgactattagt 459  Q
     |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  3949359 attcacctgtttcttcttctttccctctgccttagttggactattatcatcataactattagt 3949297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 198 - 432
Target Start/End: Complemental strand, 25168067 - 25167833
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 296  Q
    |||||||||||||||| |||||| ||| || |||||||| ||||||||| |||| |||||||| ||||||||||||||||||| || || ||||||||||    
T  25168067 tcaaaagtatgaccatacttggccaaacaacgactaaaa-gactactctttctatgaaaatttgaacaaaagtattggtattcccatatattctgttgca 25167969  T
Q  297 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 396  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||| ||||| |||  | ||||| ||||||||||||||||||||||| ||||||||||    
T  25167968 attgaaccaactattctgtatctgtcaaggcggctttggaggtacccttttgggcatgagtcctctttccggctgagttaaaactagaaggcttcacttt 25167869  T
Q  397 gttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||| |||||||||||||||||||||||||||||    
T  25167868 gttcacatgtttcttcttctttctctctgccttagt 25167833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 31976271 - 31976430
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||||   |||||||||||||||     
T  31976271 taggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcacatgaaccccgcacaagcacactttctcttttctctcctcttctctctt 31976370  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||||||| |||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  31976371 cctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 31976430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 11427641 - 11427796
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| || || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||     
T  11427641 taggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctctt 11427740  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  11427741 cctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 11427796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 32869701 - 32869856
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  32869701 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 32869800  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  32869801 cctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 32869856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 31953107 - 31952944
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||| |||  || | | |||||||||||||||| |||| ||||| |||||||||||     
T  31953107 taggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaaacacactttctctttcatcttctcttctctctt 31953008  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 182  Q
     ||| || ||| |||||| | |  |||||  ||||||| | |||||||||||||||||||||||    
T  31953007 cctagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttccttta 31952944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 30341437 - 30341277
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  30341437 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 30341338  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     ||||| |||| |||||||| | ||||||   | |||| | ||||||||||||||||||||    
T  30341337 cctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcct 30341277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 15508101 - 15507938
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  15508101 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 15508002  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 182  Q
     ||||| |||| |||||||| |  |||||   | |||| | |||||||||||||||||||||||    
T  15508001 cctaatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacattttccttta 15507938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 15990119 - 15989960
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  15990119 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 15990020  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||||| |||| |||||||| | ||||||   | |||| | |||||||||||||||||||    
T  15990019 cctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 15989960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 4231571 - 4231730
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  4231571 taggtggcaatacaccccttgccacccacacaaaaatctgacacgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 4231670  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||| |||||||| | ||||||   | |||| | |||||||||||||||||||    
T  4231671 cctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 4231730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 17598577 - 17598732
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| |  || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  17598577 taggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 17598676  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| | |||||| | |||||||||| ||||    
T  17598677 cctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 17598732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 22880735 - 22880580
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||||||||||||| |||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  22880735 taggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 22880636  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||  ||| |||||||| | |||||| |||||||| | ||| |||||| ||||    
T  22880635 cctaatacatggggtgtacaagggtgtatgggaataaatggtgtatatgtatcatt 22880580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 29857854 - 29858005
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||  |||||||||||||||||||||||||||| || || || ||||| || || |||||||| ||||   ||| |||||||||||  |||    
T  29857854 tggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttccta 29857953  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||| ||| |||||||| | |||||| |||||||| | |||||||||| ||||    
T  29857954 atgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatt 29858005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 31110836 - 31110679
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||| ||||  ||||||||||||||   |||||| | ||  ||||| |||||||| ||||   ||| |||||||||||     
T  31110836 taggtggcaatacaccctttgacactcaca--aaaatctgacacgtaaccacatggaccctgcacaagcacactttctcttttctctactcttctctctt 31110739  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||||||| ||||||||   |||||| | ||||||||||||||||||||||||||||    
T  31110738 cctaatgtatggggtgtacaaaggtgtatggaaataaaggatgtctatgtaacattttcc 31110679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 28536563 - 28536408
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| ||||| |||||||||||||||||||||||  |||||  || | ||||||||| |||||||| ||||  |||| |||||| ||||     
T  28536563 taggtggcaatacaacccttgacacccacacaaaaatctgacac--ggtcatgtggaccccacacaagcacactttctcttttatcttctcttccctctt 28536466  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     ||| || ||| |||||||| | ||||||   |||||| |||||| ||||||||||||    
T  28536465 cctactgcatggggtgtacaagggtgtatgaaaataaatgatgtcgatgtaacatttt 28536408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 432
Target Start/End: Complemental strand, 10990153 - 10990014
Alignment:
Q  293 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 392  Q
    ||||| ||||||||||||| || |||| | | ||| |||||||| | ||| ||||| |||| | |||||||| ||||| ||||||| |||||| | ||||    
T  10990153 tgcaaatgaaccaactattttgtatctgttagggcagctttggaggaacccttttgtgcacgagtcctcatttcggctaagttaaagctagaaggattca 10990054  T
Q  393 ctttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||| | || | ||||||||||||| ||||||||||    
T  10990053 ctttgttctcttgctgcttcttctttctcgctgccttagt 10990014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 293 - 432
Target Start/End: Original strand, 4263360 - 4263496
Alignment:
Q  293 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 392  Q
    |||||||||||||||||||| | ||||  |||| |   |||||| | ||| ||||||||||   ||||||||||||||||||||||||||| | ||||||    
T  4263360 tgcaattgaaccaactattccgtatctgccaagacaattttggaggaacccttttgagcacgggtcctcattccggctgagttaaaactagcaggcttca 4263459  T
Q  393 ctttgttcacctgtttcttcttctttctctctgccttagt 432  Q
     |||||| || ||   |||||||||| |||||||||||||    
T  4263460 ttttgtttacatg---cttcttctttttctctgccttagt 4263496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 27 - 156
Target Start/End: Complemental strand, 23128196 - 23128067
Alignment:
Q  27 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgt 126  Q
    |||||| || || ||||||||||||||||||||||||| ||||| || ||||||||||| |||||||| ||||   ||||||||| |||||  ||||||     
T  23128196 aatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctcttcctaatgc 23128097  T
Q  127 atgaggtgtacaggtgtgtataggaataaa 156  Q
    ||| | |||||| | |||||| | ||||||    
T  23128096 atgggatgtacaagggtgtatggaaataaa 23128067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 15832621 - 15832755
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacag 139  Q
    |||||||||||||||| |||||||| ||||| || ||||  |||||| ||| ||| ||||   ||||||||||| |||  |||||| ||| ||||||||     
T  15832621 acacccacacaaaaatttgacacgtagtcacgtggatcctgcacaaatacattttctcttttttctcctcttctatcttcctaatgcatggggtgtacaa 15832720  T
Q  140 gtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    | |||||| |||||||||| |||||| ||| ||||    
T  15832721 gggtgtattggaataaagggtgtctacgtatcatt 15832755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 180
Target Start/End: Original strand, 12732526 - 12732665
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacag 139  Q
    |||||||||||||||||||||||||||  |  || |||||||| || |||| ||| |||| |||||||||||||||||  ||| |  || ||||| |||     
T  12732526 acacccacacaaaaatctgacacgtggctatgtggatcccacataagcacattttctctttcatctcctcttctctctttctagtacataaggtgcacaa 12732625  T
Q  140 gtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
       ||||| | |||||| |||||||||||||||||||||||    
T  12732626 aaatgtatggaaataaa-gatgtctatgtaacattttcctt 12732665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 138
Target Start/End: Complemental strand, 9379782 - 9379670
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| ||||| ||||||| |||||||| |||||||||| ||  || ||| |||||||||||| ||| |||| ||||| ||||| |||||  ||||||    
T  9379782 caatacatcccttgacacccatacaaaaatttgacacgtggccatgtggatctcacacaaacacattttctctttcatcttctcttttctcttcctaatg 9379683  T
Q  126 tatgaggtgtaca 138  Q
     || |||| ||||    
T  9379682 cataaggtataca 9379670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 31109477 - 31109426
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 70  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||| |||||    
T  31109477 taggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcac 31109426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 138
Target Start/End: Original strand, 946407 - 946518
Alignment:
Q  27 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgt 126  Q
    ||||||||| || ||||| || |||||||||||||| | ||||| | |||||| | | | |||||||| ||||   |||||||||||||||  ||||||     
T  946407 aatacaccctttgacacctacccaaaaatctgacacctagtcacgtaaatcccgctctagcacactttctcttttctctcctcttctctcttcctaatgc 946506  T
Q  127 atgaggtgtaca 138  Q
    ||||| ||||||    
T  946507 atgagatgtaca 946518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 6209542 - 6209423
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||   || |||| |||||||||||||| ||||| ||||| || | ||| ||| | |||||||| ||||   |||||||||||||||     
T  6209542 taggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtggaccccgcactagcacactttctcttttctctcctcttctctctt 6209443  T
Q  119 actaatgtatgaggtgtaca 138  Q
     |||||| ||| | ||||||    
T  6209442 cctaatgcatgggatgtaca 6209423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 30870057 - 30870135
Alignment:
Q  39 aacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    |||||||| | |||||||| ||| ||||||||||| | ||| ||||| |||| ||| |||| | |||||||||||||||    
T  30870057 aacacccatataaaaatctaacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctct 30870135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7367715 - 7367672
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  7367715 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 7367672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 26669943 - 26669986
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  26669943 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 26669986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 2e-71; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 198 - 432
Target Start/End: Complemental strand, 37050225 - 37049990
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 296  Q
    |||||||||||||||| |||||| ||| || |||||||| |||||||||||||| |||||||| ||||||||||||||||||| || || ||||||||||    
T  37050225 tcaaaagtatgaccatacttggccaaacaacgactaaaa-gactactctctctatgaaaatttgaacaaaagtattggtattcccatatattctgttgca 37050127  T
Q  297 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaa-gcttcactt 395  Q
    ||||||||||||||| || |||| |||| ||||||||||| ||||| ||||| |||| | |||||||||||||||||||||||||||||| |||||||||    
T  37050126 attgaaccaactattttgtatctctcaaagcggctttggaggtacccttttgggcacgagtcctcattccggctgagttaaaactagaaaggcttcactt 37050027  T
Q  396 tgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  37050026 tgttcacatgtttcttcttctttttctctgccttagt 37049990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 12 - 176
Target Start/End: Original strand, 29977901 - 29978065
Alignment:
Q  12 agaagcataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctctt 111  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| | ||||||||| |||||||| |||| ||||| |||||    
T  29977901 agaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtcatatggaccccacacaagcacactttctctttcatcttctctt 29978000  T
Q  112 ctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     ||||||||||||||||| |||||||| ||||||||||||||||| ||| |||||||||||||||    
T  29978001 ttctctcactaatgtatggggtgtacaagtgtgtataggaataaaagatatctatgtaacatttt 29978065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 23608265 - 23608413
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    |||||||||  || ||||||||||||||||||||||||| ||||| ||||  |||||||| |||||||| ||||  ||||||||||||||||  ||||||    
T  23608265 caatacaccatttgacacccacacaaaaatctgacacgtagtcacgtgaactccacacaagcacactttctcttttatctcctcttctctcttcctaatg 23608364  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||||||||||||||  ||||| ||||||||||||||||||||| ||||    
T  23608365 catgaggtgtacagggatgtatgggaataaaggatgtctatgtatcatt 23608413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 50052505 - 50052345
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| |||| | |||||||||||||||     
T  50052505 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctctt 50052406  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     ||| || || |||||||||   |||||| |||||||||| ||||||||||||||||||||    
T  50052405 cctagtgcataaggtgtacaaaggtgtatgggaataaagggtgtctatgtaacattttcct 50052345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 29239909 - 29240072
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||| |||||||||||||| |||||| ||||| || | ||||||||| |||||||| |||| | |||||||||||||||     
T  29239909 taggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacactttctctttcctctcctcttctctctt 29240008  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 182  Q
     ||| || ||| |||||||| | |||||| |||||||||| |||||||||||||||||||||||    
T  29240009 cctagtgcatggggtgtacaagagtgtatgggaataaagggtgtctatgtaacattttccttta 29240072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 50526248 - 50526088
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||| || || || ||||| ||| |||| | || | |||||||||||||||     
T  50526248 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtggattccgcacaagcacgctttctatttcctctcctcttctctctt 50526149  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     ||| || ||| |||||||| | |||||||| |||||||| ||| ||||||||||||||||    
T  50526148 cctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcct 50526088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 6034067 - 6034222
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||||||||||||||||||||| || ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||     
T  6034067 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctctt 6034166  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | ||||||  ||||||| | |||||||||| ||||    
T  6034167 cctaatgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 6034222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 41236370 - 41236525
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  41236370 taggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 41236469  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  41236470 cctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 41236525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 44 - 175
Target Start/End: Complemental strand, 56300217 - 56300086
Alignment:
Q  44 ccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgt 143  Q
    |||||||||||||||||| ||||||| ||||||||  |||||||||||||| |||| | |||||||||||||||  |||||||||||| |||||| |  |    
T  56300217 ccacacaaaaatctgacatgtggtcatatgaatcctgcacaaacacactttctctttcctctcctcttctctctttctaatgtatgagatgtacaagatt 56300118  T
Q  144 gtataggaataaaggatgtctatgtaacattt 175  Q
    ||||  |||||||| ||||||| |||||||||    
T  56300117 gtatgagaataaagaatgtctacgtaacattt 56300086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 31910215 - 31910376
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||| | || ||||||||||||||||||||||| | | |||||| | ||| ||||| |||||||| ||||   |||| ||||||||||     
T  31910215 taggtgacaatacactctttgacacccacacaaaaatctgacacatagccacatggaccccgcacaagcacactttctcttttctctcatcttctctctt 31910314  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     |||||||||| | |||||| | |||||| |||||||| | |||||||||||||||||||||    
T  31910315 cctaatgtatgggatgtacaagagtgtatgggaataaatggtgtctatgtaacattttcctt 31910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 37 - 178
Target Start/End: Original strand, 41823923 - 41824064
Alignment:
Q  37 ttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgta 136  Q
    |||||||||||||||||||||||||||| |||||||| | ||| ||||| |||||||| ||||   |||| ||||||||||  |||||| ||||||||||    
T  41823923 ttaacacccacacaaaaatctgacacgtagtcacatggaccccgcacaagcacactttctcttttctctcttcttctctcttcctaatgcatgaggtgta 41824022  T
Q  137 caggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    ||   ||||||  ||||||| | |||||||||||||||||||    
T  41824023 caaaggtgtatgagaataaatggtgtctatgtaacattttcc 41824064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 48183123 - 48182971
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    |||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||   |    
T  48183123 gtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttctt 48183024  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    |||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  48183023 aatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 48182971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 50813969 - 50813810
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| |||||||||||| |||||||||||||||||||||| ||||||| ||||| ||| |||||  ||||||| |||| | ||| |||||||||||     
T  50813969 taggtggtaatacaccccttgacacccacacaaaaatctgacatgtggtcatatgaaccccgcacaagtacactttctctttcttcttctcttctctctt 50813870  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||||| |||||| | ||||||   | |||| | |||||||||||||||||||    
T  50813869 cctaatacatgagatgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 50813810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 28480345 - 28480184
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||||||||||| || | |||||||||||||||||     
T  28480345 taggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctctt 28480246  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     ||| || ||||| |||||| |  |||||    ||||||| |||||||||||||||||||||    
T  28480245 cctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcctt 28480184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 28481220 - 28481059
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||||||||||| || | |||||||||||||||||     
T  28481220 taggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctctt 28481121  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     ||| || ||||| |||||| |  |||||    ||||||| |||||||||||||||||||||    
T  28481120 cctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcctt 28481059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 28482095 - 28481934
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||||||||||| || | |||||||||||||||||     
T  28482095 taggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaacacactttctccttcatctcctcttctctctt 28481996  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     ||| || ||||| |||||| |  |||||    ||||||| |||||||||||||||||||||    
T  28481995 cctagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacattttcctt 28481934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 29548036 - 29547876
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| ||||| |||||||||||||||||||||| |||| || ||| ||||| || ||  |||||||||||| | ||| |||||||||||     
T  29548036 taggtggcaatacatcccttgacacccacacaaaaatctgacatgtggccatatggatcccgcataagtacactttttctttcttcttctcttctctctt 29547937  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     |||||  ||| |||||||| | ||||||   | |||| | ||||||||||||||||||||    
T  29547936 cctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcct 29547876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 42044444 - 42044289
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| || |  ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  42044444 taggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 42044345  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| | |||||| | |||||| | |||||||| |||||||||| ||||    
T  42044344 cctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcatt 42044289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 17983820 - 17983658
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  17983820 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 17983721  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     |||||  |||||||||||| | ||||||   | ||||   |||||||||||||||| |||||    
T  17983720 cctaatacatgaggtgtacaagggtgtatgcaattaaaaagtgtctatgtaacatttcccttt 17983658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 19670793 - 19670631
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  19670793 taggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 19670694  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     |||||  ||| |||||||| | ||||||   | |||| | ||||||||||||||||||||||    
T  19670693 cctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttccttt 19670631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 40574802 - 40574959
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||  |  ||||| |||||  |||| |||||||| ||||   |||||||||||||||     
T  40574802 taggtggtaatacaccctttgacacccacacaaaaatctgacacgctgctacatggatcccgaacaagcacactttctcttttctctcctcttctctctt 40574901  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     ||||| |||| |||||||| | ||||||  ||||||| | ||||||| |||||||||    
T  40574902 cctaatatatggggtgtacaagggtgtatgagaataaaaggtgtctatctaacatttt 40574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 25 - 181
Target Start/End: Complemental strand, 29589811 - 29589655
Alignment:
Q  25 gcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaat 124  Q
    |||||||||||||| |||||||||||||||||||| | |||| || ||| | |||||||||  ||||||| |||| | ||| |||||||||||  |||||    
T  29589811 gcaatacaccccttgacacccacacaaaaatctgatatgtggccatatggaccccacacaagtacactttctctttcttcttctcttctctcttcctaat 29589712  T
Q  125 gtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
      |||||||||||| | ||||||   | |||| | ||||||||||| ||||||||||    
T  29589711 acatgaggtgtacaagagtgtatgcaattaaaaggtgtctatgtaatattttccttt 29589655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 11511539 - 11511385
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   ||| |||||||||||     
T  11511539 taggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctcttctcttctctctt 11511440  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
      ||||| |||||||||||| | |||||| | |||||| | |||||||||| ||||    
T  11511439 cttaatgcatgaggtgtacaagggtgtatggaaataaatg-tgtctatgtatcatt 11511385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 138
Target Start/End: Complemental strand, 480524 - 480405
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| |||||||| ||||   |||||||||||||||     
T  480524 taggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcctcttctctctt 480425  T
Q  119 actaatgtatgaggtgtaca 138  Q
     |||||| ||| ||||||||    
T  480424 cctaatgcatggggtgtaca 480405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 186
Target Start/End: Complemental strand, 18924572 - 18924405
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| | | |||||||||||||||||| ||||  | |||||  || |||||  ||||||| |||| | ||| |||||||||||     
T  18924572 taggtggcaatacaccccttgatatccacacaaaaatctgacatgtggcaatatgaactccgcacaagtacactttctctttcttcttctcttctctctt 18924473  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaatta 186  Q
     |||||  |||||||||| | | ||||||   | |||| | |||||||||||||||||||||| ||||    
T  18924472 cctaatacatgaggtgtaaaagggtgtatgcaattaaaaggtgtctatgtaacattttcctttgatta 18924405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 23 - 174
Target Start/End: Complemental strand, 24995180 - 24995029
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||| || ||||||||| |||||| |||||||| ||||| || | ||| ||||| |||| ||| ||||   |||||||||||||||   ||    
T  24995180 tggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtggaccccgcacaagcacattttctcttttctctcctcttctctcttctta 24995081  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||| ||| ||||||||   |||||| |||||||||| |||||||||| ||||    
T  24995080 atgcatggggtgtacaatggtgtatgggaataaagggtgtctatgtatcatt 24995029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 18769115 - 18769037
Alignment:
Q  28 atacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctc 106  Q
    ||||||||| |||||||||||||||||||||||| |||||||  | ||||||||||||||||| ||| |||| ||||||    
T  18769115 atacaccccctaacacccacacaaaaatctgacatgtggtcatgtaaatcccacacaaacacattttctctttcatctc 18769037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 245 - 433
Target Start/End: Original strand, 16832082 - 16832271
Alignment:
Q  245 ctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtacca 343  Q
    ||||||| |||||||| |  |||||||||| |||||  || | ||||| ||||| |||||| |||||| || ||||  |||| | |||||||| | |||     
T  16832082 ctctctatgaaaatttgagtaaaagtattgatattcctagctattctgatgcaaatgaaccgactattatgtatctgccaagacagctttggaggcaccc 16832181  T
Q  344 ttttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagtt 433  Q
    |||||| |||   ||||||||||  ||||||||||  ||| | |||||||||||||||| || ||||| ||| |||||||||||||||||    
T  16832182 ttttgaacacgtgtcctcattccaactgagttaaagttagtaggcttcactttgttcacatgcttcttattccttctctctgccttagtt 16832271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 47104588 - 47104685
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtac 137  Q
    |||||||||||||||| |||||||||||   ||  | |||||||||||||||||| |||| |||||||||||||||||   ||||| |||||||||||    
T  47104588 acacccacacaaaaatttgacacgtggttttattgaccccacacaaacacactttctctttcatctcctcttctctcttcttaatgcatgaggtgtac 47104685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 183
Target Start/End: Original strand, 47986231 - 47986394
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| ||||| ||| |||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | | | |||||||||||     
T  47986231 taggtggcaatacatcccttgacatccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttattctcttctctctt 47986330  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaa 183  Q
     |||||  ||| | |||||| | |||||| | ||| || | ||||||||||||||||||||||||    
T  47986331 cctaatacatgggatgtacaagggtgtat-gcaattaaaggtgtctatgtaacattttcctttaa 47986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 248 - 432
Target Start/End: Original strand, 24239788 - 24239970
Alignment:
Q  248 tctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattt 346  Q
    |||| |||||||| ||||||||||||| ||||| | | | |||| ||| |||||| ||||||||| || ||||  ||||   ||||| || ||||| |||    
T  24239788 tctatgaaaatttgaacaaaagtattgatattccctgttattcttttgtaattgagccaactattatgtatctgccaagatagcttttgaggtacccttt 24239887  T
Q  347 tgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    || ||||   |||||||||||||||||||||| |||| | |||||||||| |||||||    |||||||||||||  |||||||||    
T  24239888 tgggcacgggtcctcattccggctgagttaaagctagtaggcttcactttattcaccta---cttcttctttctcgatgccttagt 24239970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 158
Target Start/End: Complemental strand, 54473610 - 54473471
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||  || |||||||||||||||||| |||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  54473610 taggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttatcttttctctcctcttctctctt 54473511  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaagg 158  Q
     |||||  |||  ||||||| | |||||| ||||||||||    
T  54473510 cctaatacatggagtgtacaagggtgtatgggaataaagg 54473471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 55475214 - 55475373
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||| || ||| | ||  || ||  ||||||| |||| | ||| |||||||||||     
T  55475214 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtggccatatggaccctgcataagtacactttctctttcttcttctcttctctctt 55475313  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||| |||||||| | ||||||   | |||| | |||||||||||||||||||    
T  55475314 cctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 55475373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 3481677 - 3481775
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||||||||||| | || ||||||||||||||||||||||| | ||||| || | ||||||||| |||||||| |||| | || | ||||||||||    
T  3481677 taggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtggaccccacacaagcacactttctctttcctcccatcttctctct 3481775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 28 - 117
Target Start/End: Original strand, 18769141 - 18769230
Alignment:
Q  28 atacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||||  ||||||||||||||||||||||||||||||||  | || |||||||||| ||| ||| |||| |||||||| || |||||    
T  18769141 atacaccctctaacacccacacaaaaatctgacacgtggtcatgtaaaccccacacaaatacattttctctttcatctccttttttctct 18769230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 432
Target Start/End: Complemental strand, 19852547 - 19852474
Alignment:
Q  359 ctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||||| |||||||||||||| | || ||||||||| ||| || |||||||||||| |||||||||||||    
T  19852547 ctcattccgggtgagttaaaactagcaggcctcactttgtgcacgtgcttcttcttctttttctctgccttagt 19852474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 205 - 372
Target Start/End: Original strand, 18522202 - 18522369
Alignment:
Q  205 tatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaac 303  Q
    |||||||||||||||| ||| |||  |||| | |||||  ||||||| |||||||| ||||||||||||  ||||| |  || ||||| ||||| |||||    
T  18522202 tatgaccattcttggccaaacaaaagctaata-gactatactctctatgaaaatttgaacaaaagtattcatattcccgaatattctgctgcaactgaac 18522300  T
Q  304 caactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctga 372  Q
    ||||||||||  ||||  |||| || ||||||| | | | ||||||||||  |||||||||||||||||    
T  18522301 caactattctatatctgccaagtcgactttggaggcatccttttgagcacggatcctcattccggctga 18522369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 26 - 117
Target Start/End: Complemental strand, 48647796 - 48647705
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||| || |  || ||||| |||| ||| |||| | |||||||||||||||    
T  48647796 caatacacctcttaacacccacataaaaatctaacacgtggtcacgtggactccgcacaagcacaatttctctttcctctcctcttctctct 48647705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 16593826 - 16593899
Alignment:
Q  359 ctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||||||| |||||||||||| | || ||||||||| ||| || |||| ||||||| |||||||||||||    
T  16593826 ctcattccggctaagttaaaactagcaggcctcactttgtgcacgtgcttctacttctttttctctgccttagt 16593899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 29234318 - 29234205
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||| || | |||  |||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||  |||    
T  29234318 tggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttccta 29234219  T
Q  123 atgtatgaggtgta 136  Q
    ||| ||| ||||||    
T  29234218 atgcatggggtgta 29234205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 32766981 - 32767028
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  32766981 taggtggcaatacaccccttgacacccatacaaaaatctgacatgtgg 32767028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 55079791 - 55079692
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacat-gaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    |||||||||||||||| ||| ||||||| |||||||||||||| |||| || || ||  |||||||||  ||||||| |||| | ||| |||||||||||    
T  55079791 taggtggcaatacacctcttgacacccatacaaaaatctgacatgtggccatatggacccccacacaagtacactttctctttcttcttctcttctctct 55079692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 44536822 - 44536725
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||||||||||||| || ||| |||||||||||||||||| ||||||| ||  | |||||| ||  ||||||| |||| | ||| |||||||||||    
T  44536822 taggtggcaatacaccc-ttgacatccacacaaaaatctgacatgtggtcatatagaccccacataagtacactttctctttcttcttctcttctctct 44536725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 29535425 - 29535497
Alignment:
Q  44 ccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    |||||||||||| || ||| ||| ||| || |||||||||||||||||||| |||| |||||| | ||||||||    
T  29535425 ccacacaaaaatatg-cacatggccacgtggatcccacacaaacacactttctctttcatctcttattctctct 29535497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 198 - 432
Target Start/End: Complemental strand, 37344843 - 37344609
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 296  Q
    |||| |||||||||||||||||| ||| || ||||| || ||||||||||| ||||||||||| ||||||| ||||||||||| ||||| || || ||||    
T  37344843 tcaagagtatgaccattcttggccaaacaacgactagaa-gactactctctataagaaaatttgaacaaaaatattggtattcccagatattatgctgca 37344745  T
Q  297 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 396  Q
    | |||| |||||||| || || | ||||||||||||||||  |||| ||||| |||| ||||||||||||||||||||||||||||||| | ||||||||    
T  37344744 aatgaatcaactattatgtatatgtcaaggcggctttggagatacccttttgggcacgaatcctcattccggctgagttaaaactagaatgattcacttt 37344645  T
Q  397 gttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||||||||||||||||||||||||||||    
T  37344644 gttcacctgtttcttcttctttctctctgccttagt 37344609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 28863478 - 28863633
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||  ||||||||||||||||     
T  28863478 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctctt 28863577  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| |||||||||||| | |||||| |||||||||| |||||||||| ||||    
T  28863578 cctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 28863633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 40613979 - 40613819
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||| |||||| | ||| ||||| |||||||| ||||   |||||| |||| |||     
T  40613979 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctattctttctt 40613880  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
      ||||||||| |||||||| | |||||| |||||||||| ||||||||||||||||||||    
T  40613879 cataatgtatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcct 40613819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 23 - 174
Target Start/End: Complemental strand, 7465808 - 7465657
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||||||||| |||||||| ||||  ||||| ||||||||||  |||    
T  7465808 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttatctcttcttctctcttccta 7465709  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||| |||||||||||| | |||||| |||||||||| |||||||||| ||||    
T  7465708 atgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 7465657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 17473047 - 17473198
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||  |||    
T  17473047 tggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttccta 17473146  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||| |||||||||||| | |||||| |||||||||| |||||||||| ||||    
T  17473147 atgcatgaggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 17473198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 17820082 - 17819962
Alignment:
Q  18 ataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| || || | |||||||||||||| ||| |||| |||||||||||||||||    
T  17820082 ataggtggcaatacaccccttgacacccacacaaaaatctgacatgtggttacgtggaccccacacaaacacattttctctttcatctcctcttctctct 17819983  T
Q  118 cactaatgtatgaggtgtaca 138  Q
      |||||| ||||||||||||    
T  17819982 tcctaatgcatgaggtgtaca 17819962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 234 - 432
Target Start/End: Complemental strand, 31092505 - 31092306
Alignment:
Q  234 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctt 332  Q
    |||||||||| ||||||| |||||||| |||||||| ||||   ||| | ||| ||||  ||||| || ||||||||||||| ||||  |||| || |||    
T  31092505 aaaagactaccctctctatgaaaatttgaacaaaagcattgacgttcccggatattctaatgcaaatggaccaactattctgtatctggcaagacgactt 31092406  T
Q  333 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||| ||||| ||||| |||| | |||||||||||||||||||||| |||||| || ||||||| ||||| || ||||||||||||||||||| ||||||    
T  31092405 tggaggtacccttttgggcacgagtcctcattccggctgagttaaatctagaaggcatcactttattcacgtgattcttcttctttctctctgtcttagt 31092306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 42257216 - 42257376
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| |  || ||||||||| ||||||||||||||||| |||||| | ||| ||||| |||||||| ||||   ||||||||||| |||     
T  42257216 taggtggcaatacatcatttgacacccacataaaaatctgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttctt 42257315  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     |||||||||| |||||||| | |||||||| |||||||| ||||||||||| ||||||||    
T  42257316 cctaatgtatggggtgtacaagagtgtatagaaataaagggtgtctatgtaatattttcct 42257376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 19930897 - 19930742
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||| ||||  || | ||| |||||||||||||| ||||   |||||||||||||||     
T  19930897 taggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaaacacactttctcttttctctcctcttctctctt 19930798  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| |||||||||||| | |||||| |||||||| | |||||||||| ||||    
T  19930797 cctaatgcatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcatt 19930742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 247 - 432
Target Start/End: Original strand, 14296202 - 14296388
Alignment:
Q  247 ctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccatt 345  Q
    ||||| |||||||| ||||||||||||  ||||| ||  | |||| |||||||||||||||||||| || ||||  ||||||  ||||||| ||||| ||    
T  14296202 ctctacgaaaatttgaacaaaagtatttatattcccacttattctattgcaattgaaccaactattatgtatctgccaaggcatctttggaggtaccctt 14296301  T
Q  346 ttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||  ||| | | |||||||||||||||||||| |||| | |||||| |||||||| ||| |||||||||||||||||| |||||||    
T  14296302 ttggacacgagtgctcattccggctgagttaaagctagtaggcttcattttgttcatctgcttcttcttctttctctctaccttagt 14296388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 20700841 - 20700997
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    |||||||||||||| || || || ||||||||||||||||||| ||||| || | ||| || || |||||||| |||| | |||||||||||||||  ||    
T  20700841 gtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctctttcctctcctcttctctcttcct 20700940  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    | || ||| |||||||| | |||||| |||||||||| |||||||||||||||||||    
T  20700941 agtgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtaacattttcc 20700997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 22 - 179
Target Start/End: Original strand, 2533150 - 2533306
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    ||||||||||| || || ||||| ||||||||||||||||||| | |||||  | ||| ||||| |||||||||||||  ||||||||||||||||  |     
T  2533150 gtggcaatacatcctttgacacc-acacaaaaatctgacacgtagccacatagaccccgcacaagcacactttttcttttatctcctcttctctcttccc 2533248  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    |||||||| |||||||| | |||||| |||||||||| ||| ||| ||||||||||||    
T  2533249 aatgtatggggtgtacaagggtgtatgggaataaagggtgtatatataacattttcct 2533306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 301 - 430
Target Start/End: Original strand, 18811704 - 18811833
Alignment:
Q  301 aaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttc 400  Q
    |||||||||||||| |||| ||||||  |||||||| |  || ||||| ||||   |||||||||||||||||||||| ||| ||||||||||||| | |    
T  18811704 aaccaactattctgtatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaagcttcactttatgc 18811803  T
Q  401 acctgtttcttcttctttctctctgcctta 430  Q
    ||||| ||||||||||||||||||||||||    
T  18811804 acctgcttcttcttctttctctctgcctta 18811833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 167
Target Start/End: Complemental strand, 33436177 - 33436029
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||||||||||||||||| |||||| ||||| || | ||| ||||| |||||||| |||| | |||| ||||||||||     
T  33436177 taggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcatcttctctctt 33436078  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatg 167  Q
     |||||| |||||||||||| | ||||||  ||||||| | ||||||||    
T  33436077 cctaatgcatgaggtgtacaagggtgtatgagaataaaaggtgtctatg 33436029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 158
Target Start/End: Original strand, 9058503 - 9058642
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  9058503 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 9058602  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaagg 158  Q
     |||||| ||| |||||||| | |||||| ||||||||||    
T  9058603 cctaatgcatggggtgtacaagagtgtatgggaataaagg 9058642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 13438366 - 13438521
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||| || || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  13438366 taggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 13438465  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  13438466 cctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 13438521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 3154193 - 3154303
Alignment:
Q  46 acacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgt 145  Q
    |||||||||||||||||||||||||||| ||||| | |||||||| ||| |||| ||||||||||| ||||||||||||| | | ||| |||| |||| |    
T  3154193 acacaaaaatctgacacgtggtcacatggatcccgcccaaacacagtttctctttcatctcctcttttctctcactaatgcacggggtatacaagtgtct 3154292  T
Q  146 ataggaataaa 156  Q
    |||||||||||    
T  3154293 ataggaataaa 3154303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 26 - 178
Target Start/End: Original strand, 36168866 - 36169018
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| || ||||| ||||||||||||| |||||||||| |||||| | ||| ||||| || ||||| ||||   |||||| ||||||||  ||||||    
T  36168866 caatacatcctttaactcccacacaaaaatttgacacgtggccacatggaccccgcacaagcatactttctcttttctctcctattctctcttcctaatg 36168965  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    |||| |||||||| | ||||||  ||||||||| ||| |||||||||||||||    
T  36168966 tatggggtgtacaagagtgtatgagaataaagggtgtttatgtaacattttcc 36169018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 10249459 - 10249304
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   ||||||||| |||||     
T  10249459 taggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctctt 10249360  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  10249359 cctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 10249304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 28381732 - 28381577
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  |  ||||||||||||||||||||||||| |||||||| |  || ||||| |||||||| ||||   |||| ||||||||||     
T  28381732 taggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcacatggactccgcacaagcacactttctcttttctctcatcttctctctt 28381633  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||||| |||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  28381632 cctaatatatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 28381577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 2997564 - 2997402
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  2997564 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 2997465  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     |||||  |||||||||||| | ||||||   | ||||   |||||||||||||||| |||||    
T  2997464 cctaatacatgaggtgtacaagggtgtatgcaattaaaaagtgtctatgtaacatttcccttt 2997402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 138
Target Start/End: Complemental strand, 38273215 - 38273100
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||| |||||||||||||||||||||||||||| | |||||| | ||| ||| | |||||||| ||||   |||||| ||||||||  |||    
T  38273215 tggcaatacaccctttaacacccacacaaaaatctgacacgtagccacatggaccccgcactagcacactttctcttttctctcctattctctcttccta 38273116  T
Q  123 atgtatgaggtgtaca 138  Q
    ||||||| ||||||||    
T  38273115 atgtatggggtgtaca 38273100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 177
Target Start/End: Original strand, 44151945 - 44152108
Alignment:
Q  18 ataggtggcaatacaccccttaacacccacacaaaaa-tctgacacgtggtcacat---gaatcccacacaaacacactttttcttgcatctcctcttct 113  Q
    ||||||| |||||||| | |||||||| ||| ||||| ||||||||||||| |  |   ||||||||||||| |||||||| |||| |||||||||||||    
T  44151945 ataggtgacaatacactctttaacacctacaaaaaaaatctgacacgtggttatgtagtgaatcccacacaagcacactttctctttcatctcctcttct 44152044  T
Q  114 ctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
    ||||  |||||| ||||| | |||| | ||||||  ||||||| | ||| ||||||||||||||    
T  44152045 ctcttcctaatgcatgagatatacaagggtgtatgcgaataaaaggtgtttatgtaacattttc 44152108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 17823807 - 17823971
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaat----cccacacaaacacactttttcttgcatctcctcttctc 114  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||    | ||  ||    |||| |||| |||||||| |||| |||||| |||||||    
T  17823807 taggtggcaatacattcctgaacacccacacaaaaatctgacacgtaactatatatatggaccccatacaagcacactttctctttcatctcatcttctc 17823906  T
Q  115 tctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    |||  | ||| |||| |||||||| | ||||||   |||||||||||||||||||||||||||||    
T  17823907 tcttccaaatatatggggtgtacaagggtgtatgtaaataaaggatgtctatgtaacattttcct 17823971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 30915486 - 30915641
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || || |||||| ||||||||||||||| ||||| || | |||  |||| |||||||| ||||   |||| ||||||||||     
T  30915486 taggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctctt 30915585  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||  ||| |||||||| | |||||| | ||||| ||||||||||||| ||||    
T  30915586 cctaatacatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 30915641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 32505725 - 32505570
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| | ||   |||||||||||||||     
T  32505725 taggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctattttctctcctcttctctctt 32505626  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
      ||||| ||| |||||||| | ||||||  ||||||||  |||||||||| ||||    
T  32505625 cttaatgcatggggtgtacaagggtgtatgagaataaagagtgtctatgtatcatt 32505570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 181
Target Start/End: Original strand, 38732384 - 38732539
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||| ||| | ||| |||||  ||||||| |||| | ||| |||||||||||  |||||     
T  38732384 caatacatcccttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 38732483  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     ||||| |||||| |  |||||   | |||| | ||||||||||||||||||||||    
T  38732484 catgagatgtacaaggatgtatgcaattaaaaggtgtctatgtaacattttccttt 38732539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40701501 - 40701656
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| || || || | ||| ||||| |||||||| ||||   |||| ||||||||||     
T  40701501 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctctt 40701600  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||  |||||||| | |||||| | |||||| | |||||||||| ||||    
T  40701601 cctaatgcatcgggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 40701656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 43490144 - 43490303
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  43490144 taggtgacaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttatctttcttcttctcttctctctt 43490243  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||  |||||||| | ||||||   | |||| | |||||||||||||||||||    
T  43490244 cctaatacatagggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 43490303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 3440002 - 3440163
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||| |||  |||||||||||||||||| ||| ||| | || || | ||| ||||| |||| ||| |||| | |||||||||||||||     
T  3440002 taggtggcaatacactcctggacacccacacaaaaatctaacatgtgattacgtggaccccgcacaagcacattttctctttcctctcctcttctctctt 3440101  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     |||   |||  ||||||||   |||||| | |||||||| |||||||||||||||||||||    
T  3440102 tctagaatatagggtgtacaaaggtgtatggaaataaagggtgtctatgtaacattttcctt 3440163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 5574565 - 5574485
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||| ||||| || ||||| ||||| |||||||| ||||    
T  5574565 taggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctctt 5574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 15428814 - 15428663
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    ||||| |||||||||||||||| ||||||||||||||||| |||| ||  | || ||||| |||||||| ||| |||| ||||||||||| |||||  ||    
T  15428814 gtggccatacaccccttaacactcacacaaaaatctgacatgtggccatgtaaaccccacgcaaacacattttctctttcatctcctcttttctctttct 15428715  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    | |  ||| |||||||| | ||||||  |  |||| |||||||||||||||||    
T  15428714 agtacatg-ggtgtacaagggtgtatgagggtaaatgatgtctatgtaacatt 15428663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 13365380 - 13365536
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    |||||||| ||||||| |||||||||||||||||||||| |||  || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||  |||    
T  13365380 tggcaatataccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttccta 13365479  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    ||  ||| |||||||| | ||| ||   | |||| | ||||||||||||||||||||    
T  13365480 atacatggggtgtacaagggtgaatgcaattaaaaggtgtctatgtaacattttcct 13365536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 45097812 - 45097652
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| ||||| ||||||| |||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  45097812 taggtggcaatacatcccttgacacccatacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 45097713  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     |||||  ||  | |||||| | ||||||   | |||| ||||| ||||||||||||||||    
T  45097712 cctaatacatcggatgtacaagagtgtatgcaattaaaagatgtttatgtaacattttcct 45097652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 4060708 - 4060863
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||  || ||| ||||||||||||||||||||| || || || ||||| || || |||||||| | ||   |||| ||||||||||     
T  4060708 taggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttcttttttctctcatcttctctctt 4060807  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| | |||||| ||||| |||||| ||||    
T  4060808 cctaatgcatggggtgtacaagggtgtatggaaataaaagatgtttatgtatcatt 4060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 26891581 - 26891530
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 70  Q
    |||||||||||||||||||  |||||||||||||||||||||| ||||||||    
T  26891581 taggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcac 26891530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 329 - 418
Target Start/End: Original strand, 8413844 - 8413933
Alignment:
Q  329 gctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttcttt 418  Q
    |||||||| ||||| ||||||||||   |||||||||||| |||||| || |||| | |||||||||||||| |||| ||||||| ||||    
T  8413844 gctttggaggtacccttttgagcacgggtcctcattccggttgagttgaagctagtaggcttcactttgttcgcctgcttcttctgcttt 8413933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 293 - 399
Target Start/End: Complemental strand, 18693230 - 18693124
Alignment:
Q  293 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 392  Q
    ||||||||||||||||||| || |||| ||||| |  ||||||| | ||| ||||  |||||  |||||||||||||| ||||||| |||| |  |||||    
T  18693230 tgcaattgaaccaactattttgtatctgtcaagacaactttggaggaacccttttaggcacaggtcctcattccggcttagttaaagctagcagacttca 18693131  T
Q  393 ctttgtt 399  Q
    |||||||    
T  18693130 ctttgtt 18693124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 21301516 - 21301415
Alignment:
Q  80 acacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    ||||||||||||||| ||||  |||| ||||||| |||  ||| || |||||||||||| | |||||| | |||||||| ||| ||| ||||||||| ||    
T  21301516 acacaaacacactttctcttttatcttctcttctttcttcctagtgcatgaggtgtacatgagtgtatggaaataaagggtgtgtatctaacatttttct 21301417  T
Q  180 tt 181  Q
    ||    
T  21301416 tt 21301415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 27864730 - 27864772
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgt 64  Q
    |||||||||||||| || ||| |||||||||||||||||||||    
T  27864730 gtggcaatacaccctttgacatccacacaaaaatctgacacgt 27864772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 116
Target Start/End: Original strand, 41575168 - 41575258
Alignment:
Q  27 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatccc-acacaaacacactttttcttgcatctcctcttctctc 116  Q
    ||||||||| || |||  ||||||||||| ||||| |||||||  || | ||| |||||| |||||||| |||| ||||||||||||||||    
T  41575168 aatacaccctttgacattcacacaaaaatttgacatgtggtcatgtggacccctacacaagcacactttctctttcatctcctcttctctc 41575258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 41758639 - 41758772
Alignment:
Q  50 aaaaatctgacacgtggtcacatgaatcccacacaaacacactttttct--tgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtat 147  Q
    ||||||||||||||| | ||||| |||| | || |||| ||| ||||||  |  ||||||||||||||||  ||||| |||| |||||||| |  |||||    
T  41758639 aaaaatctgacacgtagccacataaatctcgcataaacgcacattttctcttttatctcctcttctctcttcctaatatatggggtgtacaaggatgtat 41758738  T
Q  148 aggaataaaggatgtctatgtaacattttccttt 181  Q
      |||||||   ||||||||||||||||| ||||    
T  41758739 gagaataaaatgtgtctatgtaacatttttcttt 41758772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 16096914 - 16096871
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  16096914 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 16096871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 42849793 - 42849836
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  42849793 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 42849836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 4e-51; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 17 - 183
Target Start/End: Complemental strand, 6260080 - 6259914
Alignment:
Q  17 cataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctc 116  Q
    |||||||| |||||||||| ||||||||||| ||||||||| |||| |||||||||| | | |||| || |||||||| |||| ||||||||||||||||    
T  6260080 cataggtgacaatacaccctttaacacccacgcaaaaatctaacacatggtcacatggacctcacagaagcacactttctctttcatctcctcttctctc 6259981  T
Q  117 tcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaa 183  Q
    ||||||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  6259980 tcactaatgtatgggatgtacaagtgtgtataggaataaaggatatctatgtaacattttcctttaa 6259914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 198 - 390
Target Start/End: Original strand, 32278607 - 32278794
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 296  Q
    ||||||||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||  | |||     |||||||||||| || || |||||||    
T  32278607 tcaaaagtatgaccattcttggccaaacaacgactaaaa-gactactctctctaagaaaattagagcaa-----ttggtattctcatatattttgttgca 32278700  T
Q  297 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagctt 390  Q
    |||||||| ||||||||| |||| |||||||||||||||| ||||| ||||| | || |||| |||||||||||||||||||||||||| ||||    
T  32278701 attgaacccactattctgtatctgtcaaggcggctttggaggtacccttttgggaacgaatcttcattccggctgagttaaaactagaaggctt 32278794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 6679721 - 6679879
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || |||||||||||||||||||||||||||||||||| | ||| |||||||||| ||| ||||   |||||||||||||||     
T  6679721 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacattttctcttttctctcctcttctctctt 6679820  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
     |||||||||  |||||||| | ||||||   |||||| ||||||||||||||||||||    
T  6679821 cctaatgtatagggtgtacaagggtgtatgacaataaatgatgtctatgtaacattttc 6679879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 26720539 - 26720700
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||| ||||| ||||| |||||||| ||||   ||| |||||||||||     
T  26720539 taggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctctt 26720638  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     |||||||||| |||||||  | ||||||  ||||||| ||||||||| |||||||||||||    
T  26720639 cctaatgtatggggtgtactagggtgtatgagaataaatgatgtctatataacattttcctt 26720700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 26990288 - 26990449
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||||||| |||||| ||||| ||||| |||||||| ||||   ||| |||||||||||     
T  26990288 taggtggcaatacaccctttaacacctacaaaaaaatctgacacgtggccacatggatcccgcacaagcacactttctcttttctcttctcttctctctt 26990387  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     |||||||||| |||||||  | ||||||  ||||||| ||||||||| |||||||||||||    
T  26990388 cctaatgtatggggtgtactagggtgtatgagaataaatgatgtctatataacattttcctt 26990449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 255 - 430
Target Start/End: Original strand, 788228 - 788403
Alignment:
Q  255 aaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcac 353  Q
    |||||| ||||||||| ||||||||||| ||| |||||||||||||||||||| ||||||  || | |||||||||||||||| | ||| ||||| ||||    
T  788228 aaatttgaacaaaagt-ttggtattctccgatattctgttgcaattgaaccaattattctatatatgtcaaggcggctttggaggaacccttttgggcac 788326  T
Q  354 aaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgcctta 430  Q
     | |||||||  || ||||||||||  ||||| |||||| |||||||| ||| ||||||||||||||||||||||||    
T  788327 gagtcctcatagcgtctgagttaaagttagaaggcttcattttgttcatctgcttcttcttctttctctctgcctta 788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 18520961 - 18520806
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||  ||||||||||||||||     
T  18520961 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttatctcctcttctctctt 18520862  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| |||||||||||| | ||||||   |||||||| |||||||||| ||||    
T  18520861 cctaatgcatgaggtgtacaagggtgtatgaaaataaagggtgtctatgtatcatt 18520806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 2740297 - 2740452
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||||   ||||| |||||||||     
T  2740297 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctccccttctctctt 2740396  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| | |||||| | |||||| |||||||||| |||||||||| ||||    
T  2740397 cctaatgcatgggatgtacaagggtgtatgggaataaagggtgtctatgtatcatt 2740452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 135
Target Start/End: Original strand, 28177798 - 28177914
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||| | ||| |||||||||||||| ||||   |||||||||| ||||     
T  28177798 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacatggaccccgcacaaacacactttctcttttctctcctcttccctctt 28177897  T
Q  119 actaatgtatgaggtgt 135  Q
     |||||||||| |||||    
T  28177898 cctaatgtatggggtgt 28177914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 14831837 - 14831992
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||| ||||| || ||||| ||||| |||||||| | ||   |||||||||||||||     
T  14831837 taggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtggatcccgcacaagcacactttcttttttttctcctcttctctctt 14831936  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  14831937 cctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14831992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 36733019 - 36732872
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||| ||||||||||| || ||||||||||||||||||||||| | ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  36733019 taggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 36732920  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctat 166  Q
     |||||| |||||||||||| | |||||| |||||||||| |||||||    
T  36732919 cctaatgcatgaggtgtacaagggtgtatgggaataaagggtgtctat 36732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40145430 - 40145585
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  40145430 taggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 40145529  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| | |||||||||| | || |||  ||||||||| |||||||||| ||||    
T  40145530 cctaatgcacgaggtgtacaagggtatatgagaataaagggtgtctatgtatcatt 40145585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 3921342 - 3921181
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  3921342 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 3921243  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     ||||| |||| |||||||| | ||||||   | |||| | |||||||||||||||||||||    
T  3921242 cctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcctt 3921181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 17 - 138
Target Start/End: Complemental strand, 39557596 - 39557475
Alignment:
Q  17 cataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctc 116  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||||||| ||||||| | |||| |||| |||||||| ||||  |||||||||||||||    
T  39557596 cataggtggtaatacacctcttaacatccacacaaaaatctgacacgtgatcacatggaccccatacaatcacactttctcttttatctcctcttctctc 39557497  T
Q  117 tcactaatgtatgaggtgtaca 138  Q
    |  |||||  ||||||||||||    
T  39557496 ttcctaatacatgaggtgtaca 39557475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 2252245 - 2252085
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  2252245 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 2252146  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     ||||| |||| |||||||| | ||||||   | |||| | ||||||||||||||||||||    
T  2252145 cctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcct 2252085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 15409687 - 15409528
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||  | || ||||||||||||||||||||||||| | |||||| | ||| ||||| |||||| | ||||   |||||||||||||||     
T  15409687 taggtgacaatacattctttgacacccacacaaaaatctgacacgtagccacatggaccccgcacaagcacactctctcttttctctcctcttctctctt 15409588  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||||||| |||||||| | ||||||  ||||||||| ||| |||||||||||||||    
T  15409587 cctaatgtatggggtgtacaagggtgtatgcgaataaagggtgtttatgtaacattttcc 15409528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 33149715 - 33149560
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||||| || |||||||||||||||| |||||||| ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||     
T  33149715 taggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctctt 33149616  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||   ||||||||| |||||||||| ||||    
T  33149615 cctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatt 33149560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 247 - 432
Target Start/End: Complemental strand, 35811305 - 35811120
Alignment:
Q  247 ctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccatt 345  Q
    ||||| |||||||| ||||||||||||||||||| || || || |||||||||||||||||||||| |  || | ||||||| ||||||| | |||||||    
T  35811305 ctctatgaaaatttgaacaaaagtattggtattcccaaatattatgttgcaattgaaccaactattttatatttgtcaaggc-gctttggtaataccatt 35811207  T
Q  346 ttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||  ||| | ||||||||||  |||| |||||  |||||  ||| ||||| |||||||| |||||||||| |||||||| ||||||    
T  35811206 ttggacacgagtcctcattccaactgaattaaagttagaacactttactttattcacctgcttcttcttctatctctctgtcttagt 35811120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 35943969 - 35943812
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| |  || ||||||||||||||||||||||||| || || || ||||||||||| |||||||| |||| | ||||||||| |||||     
T  35943969 taggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtggatcccacacaagcacactttctctttcctctcctcttttctctt 35943870  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     ||| || ||| |||||||| | |||||| | ||||||   |||||||||||||||||    
T  35943869 cctagtgcatggggtgtacaagggtgtatggaaataaaatgtgtctatgtaacatttt 35943812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 31009032 - 31009171
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacag 139  Q
    ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| | || | ||| |||||||||||  ||| || ||| ||||||||     
T  31009032 acacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctcttctcttctctcttcctagtgcatggggtgtacaa 31009131  T
Q  140 gtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
      ||||||  ||||||||| ||||||||||||||||||||    
T  31009132 aggtgtatgagaataaagggtgtctatgtaacattttcct 31009171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 35785222 - 35785377
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| || || || ||||| ||||| |||||||| ||||   |||| ||||||||||     
T  35785222 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggatcccgcacaatcacactttctcttttctctcatcttctctctt 35785321  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| | |||||| | |||||||||| ||||    
T  35785322 cctaatgcatggggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 35785377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 169
Target Start/End: Original strand, 13811675 - 13811825
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| |  || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  13811675 taggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttctctctcctcttctctctt 13811774  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgta 169  Q
     |||||| ||| | |||||| |  ||||| |||||||| | ||||||||||    
T  13811775 cctaatgcatgggatgtacaaggatgtatgggaataaatggtgtctatgta 13811825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 289 - 423
Target Start/End: Complemental strand, 36868425 - 36868291
Alignment:
Q  289 ctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagc 388  Q
    |||||||  |||||||||||||| || |||| ||||||  |||||||| | ||| |||||  |||    ||||||||||||||||||||| |||||| ||    
T  36868425 ctgttgcctttgaaccaactattatgtatctgtcaaggtagctttggaggaacccttttggacacgggccctcattccggctgagttaaagctagaaggc 36868326  T
Q  389 ttcactttgttcacctgtttcttcttctttctctc 423  Q
    |||||||| ||||| || |||||||||||||||||    
T  36868325 ttcactttattcacttgcttcttcttctttctctc 36868291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 16327924 - 16328041
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| || || ||||||||| |||||||||||||||| |||  || | | ||||||| ||||||||||||| ||| | ||||||||||||    
T  16327924 taggtggcaatacatccattgacacccacataaaaatctgacacgtgttcatgtgcacctcacacaagcacactttttctttcattttctcttctctctc 16328023  T
Q  119 actaatgtatgaggtgta 136  Q
     ||||| |||| ||||||    
T  16328024 cctaatatatggggtgta 16328041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 432
Target Start/End: Complemental strand, 19215511 - 19215372
Alignment:
Q  293 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 392  Q
    |||||||  ||||||||||||| ||||  |||||| | |||| | ||||| ||||| || |   ||||||||| |||||||||||| |||||  || |||    
T  19215511 tgcaattcgaccaactattctgtatctgccaaggcagttttgaaggtacccttttgggctcgggtcctcattcgggctgagttaaagctagacggcatca 19215412  T
Q  393 ctttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||||| ||||||||| ||||||||| ||||||    
T  19215411 ctttgttcacctgcttcttcttcattctctctgtcttagt 19215372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 33825401 - 33825243
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||| |||| ||||||||| |||||||||||||||| |||  |||| |  |||||| |||||||| ||||  |||| |||||||||||     
T  33825401 taggtggcaatacactccttgacacccacataaaaatctgacacgtgttcatgtgaaccttacacaagcacactttctcttttatcttctcttctctctt 33825302  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
     ||| || ||| |||||| | |  |||||  ||||||| | |||| |||||||||||||    
T  33825301 cctagtgcatggggtgtagaaggctgtatgagaataaatggtgtcaatgtaacattttc 33825243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 42414379 - 42414281
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||   | |||||||||||||    
T  42414379 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttatcttttctttcctcttctctct 42414281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 38296226 - 38296320
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttct 113  Q
    |||||| ||||||||| ||||| ||||||||||||||| ||||||| |  || || |||| |||||| |||||||| || | |||||||||||||    
T  38296226 taggtgtcaatacacctcttaatacccacacaaaaatcagacacgtagctacgtggatccaacacaagcacactttctcattcatctcctcttct 38296320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 179
Target Start/End: Complemental strand, 39688971 - 39688814
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    ||||||||||| ||||| |||||||||||||||||||| | ||||||| ||||| ||| || ||  ||||||| |||| | |||  ||||||||||  ||    
T  39688971 gtggcaatacatcccttgacacccacacaaaaatctgatatgtggtcatatgaaccccgcataagtacactttctctttcttcttttcttctctcttcct 39688872  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    |||  ||  ||||||||   ||||||   | |||| | ||||||||||||||||||||    
T  39688871 aatacatagggtgtacaaaggtgtatgcaattaaaaggtgtctatgtaacattttcct 39688814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 9603844 - 9603934
Alignment:
Q  27 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||| | || ||||| ||||||||||||||||| |||||| ||| | |||| |||| |||||||| |||| ||| || ||||||||||    
T  9603844 aatacactcattcacacctacacaaaaatctgacacatggtcatatggaccccatacaatcacactttctctttcatttcgtcttctctct 9603934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 21370048 - 21370186
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacag 139  Q
    |||||||| ||||||||||||| |||||||| || | ||| |||||||||| ||| |||| | |||| |||||| |||  ||| | ||| || ||||||     
T  21370048 acacccactcaaaaatctgacatgtggtcacgtggaccccgcacaaacacattttctctttcctctcatcttctttcttcctagtatataagatgtacaa 21370147  T
Q  140 gtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
      ||||||   |||||||| ||| |||||||||||||||    
T  21370148 aggtgtatgaaaataaagggtgtttatgtaacattttcc 21370186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 236 - 352
Target Start/End: Original strand, 37307134 - 37307251
Alignment:
Q  236 aagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttg 334  Q
    |||||||| ||||||  |||||||| ||||||||||||| ||||  ||| | |||| ||| |||||||||||||||| || ||||  |||| | |||||     
T  37307134 aagactacactctctgtgaaaatttgaacaaaagtattgatatttccagttattcttttgtaattgaaccaactattatgtatctgccaagacagcttta 37307233  T
Q  335 gaagtaccattttgagca 352  Q
     | ||||| |||||||||    
T  37307234 aaggtacccttttgagca 37307251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 33801635 - 33801572
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 86  Q
    |||||||||||| | ||| ||||||||||||| ||||||||||||  || || ||||||||||||    
T  33801635 gtggcaatacactcttta-cacccacacaaaattctgacacgtggcaacttggatcccacacaaa 33801572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 36875680 - 36875644
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaat 55  Q
    ||||||||||||||||| || ||||||||||||||||    
T  36875680 taggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 392 - 432
Target Start/End: Original strand, 37307257 - 37307297
Alignment:
Q  392 actttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||| || |||||||||||||||||| |||||||    
T  37307257 actttgttcacatgcttcttcttctttctctctaccttagt 37307297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 26141609 - 26141443
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttc--tctc 116  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||| ||||   ||||||||||  ||||    
T  26141609 taggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccacacaagcacactttctcttttctctcctcttctttctc 26141510  T
Q  117 tcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaa 183  Q
    |  |||||||||| |||||||| | |||||| | |||||||| ||||||||||||||||||||||||    
T  26141509 ttcctaatgtatggggtgtacaagagtgtatggaaataaagggtgtctatgtaacattttcctttaa 26141443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 25407227 - 25407065
Alignment:
Q  17 cataggtggcaatacaccccttaacacccacacaaaaa-tctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctct 115  Q
    |||||||||||||| ||||||| |||| |||||||||| ||||||||||| ||| ||| |||||||||||||||||||| |||| |||||||||||||||    
T  25407227 cataggtggcaatataccccttgacacacacacaaaaaatctgacacgtgatcatatggatcccacacaaacacactttctctttcatctcctcttctct 25407128  T
Q  116 ctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    ||||||||||||| ||||||| |  | | |||| ||||||||| || |||| |||||||||||    
T  25407127 ctcactaatgtataaggtgtataaatatatataagaataaagggtgactatataacattttcc 25407065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 49607437 - 49607592
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||||||||| |||||||| ||||   ||||||||| |||||     
T  49607437 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccacacaagcacactttctcttttctctcctcttttctctt 49607536  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| |||| ||||||| | |||||| |||||||||| |||||||||| ||||    
T  49607537 cctaatgcatgacgtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 49607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 20764992 - 20764829
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||||| |||||| | |||  |||| |||||||| ||||   |||| ||||||||||     
T  20764992 taggtggtaatacactctttaacacccacacaaaaatctgacacgtggccacatggaccccgtacaagcacactttctcttttctctcatcttctctctt 20764893  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 182  Q
     |||||||||| |||||||| | ||||||  ||||||| | |||||||||||||||||||||||    
T  20764892 cctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttccttta 20764829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 33118928 - 33118759
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcct-cttctctct 117  Q
    |||||| |||||||||| || |||||||||||||||| |||||||| ||||| || ||||| || ||||||||||| |||| | |||||| |||||||||    
T  33118928 taggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatccctcagaaacacactttctctttcctctcctccttctctct 33118829  T
Q  118 cactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaattaa 187  Q
    | ||| || ||| |||||||| | |||||| | |||||||| |||||| ||||||||||||| |||||||    
T  33118828 ccctagtgcatggggtgtacaagggtgtatggaaataaagggtgtctacgtaacattttcctataattaa 33118759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 53982034 - 53982189
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  53982034 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 53982133  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  53982134 cctaatgcatggggtgtacaaggttgtatgggaataaagggtgtctatgtatcatt 53982189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 23 - 181
Target Start/End: Original strand, 47531892 - 47532050
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||  |||||| |||||||| |||||||||||||| || ||||| ||| ||||| |||||||| ||||   |||||| ||||||||  |||    
T  47531892 tggcaatacaccttttaacatccacacaagaatctgacacgtggccatatgaaccccgcacaagcacactttctcttttctctcctattctctcttccta 47531991  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
    |||||||   |||||| |||||||| |||||||||| ||| ||||||||||||||||||    
T  47531992 atgtatggaatgtacaagtgtgtatgggaataaagggtgtttatgtaacattttccttt 47532050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 33644225 - 33644378
Alignment:
Q  21 ggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcac 120  Q
    ||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||  |    
T  33644225 ggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcc 33644324  T
Q  121 taatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||||| ||| |||||| | | |||||| |||||||||| |||||||||| ||||    
T  33644325 taatgcatggggtgtataagggtgtatgggaataaagggtgtctatgtatcatt 33644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 234 - 417
Target Start/End: Complemental strand, 29346987 - 29346803
Alignment:
Q  234 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagattt-ctgttgcaattgaaccaactattctgcatctatcaaggcggctt 332  Q
    |||||||| | ||||||| |||||||| |||||||||||||  |||||||  | | || ||||||||| |||||||||| || |||| ||||||||||||    
T  29346987 aaaagactgccctctctatgaaaattttaacaaaagtattgacattctcatctatactcttgcaattggaccaactattatgtatctgtcaaggcggctt 29346888  T
Q  333 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctt 417  Q
    |||| ||||  ||||| ||||   |||||||||||||| ||||||| ||| || || |||| ||||||||||| |||||||||||    
T  29346887 tggaggtactcttttgtgcacgggtcctcattccggctaagttaaagctataaggcatcacgttgttcacctgcttcttcttctt 29346803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 13898132 - 13897970
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||  || | | ||||||| |||||||| |||| ||||| ||||||||||||    
T  13898132 taggtggcaatacaccccttgacacccacataaaaatctgacacgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctc 13898033  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     ||| |||||| |||||| |   ||||||  ||||||| | ||||||| ||||||||| ||||    
T  13898032 cctagtgtatggggtgtagaaaagtgtatgagaataaatggtgtctatctaacatttttcttt 13897970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 41189841 - 41189679
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| |  || ||||||||| |||||| |||||||||| |||||| | ||| ||||| |||||||| ||||   ||||||||||| |||     
T  41189841 taggtggcaatacatcatttgacacccacataaaaatttgacacgtggccacatggaccccgcacaagcacactttctcttttctctcctcttctttctt 41189742  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     ||||||||||  ||||||| | |||||| | |||||||| ||||||||||||||||||||||    
T  41189741 cctaatgtatggagtgtacaagagtgtatggaaataaagggtgtctatgtaacattttccttt 41189679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 51419430 - 51419276
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| || |||||||||||||||||||||||||||||| |||||  | ||| ||||| |||||||| ||||   |||||| ||||||||  ||||||    
T  51419430 caatacatcctttaacacccacacaaaaatctgacacgtggccacatagaccccgcacaagcacactttctcttttctctcctattctctcttcctaatg 51419331  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
    |||| |||||||| | |||||| | |||||| | ||| |||||||||||||||||    
T  51419330 tatggggtgtacaagggtgtatggaaataaaaggtgtttatgtaacattttcctt 51419276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 8076416 - 8076576
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||| ||||||| || |||||||||||||||||| |||||| ||||| || | ||| ||||| |||||||| |||| | |||||||||||||||     
T  8076416 taggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctctt 8076515  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     ||| || ||| ||||||||   ||||||  ||||||| | ||||||||||||||||||||    
T  8076516 cctagtgcatggggtgtacaaaagtgtatgagaataaatggtgtctatgtaacattttcct 8076576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 11347999 - 11347840
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||| || || ||| ||||||||||||||||||||||| |||||| | ||  || || |||||||| ||||   |||||||||||||||     
T  11347999 taggtgacaatacatcctttgacatccacacaaaaatctgacacgtggccacatggaccctgcataagcacactttctcttttctctcctcttctctctt 11347900  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||||||| |||||| | | |||||| |||||||||| |||||||||| ||||||||    
T  11347899 cctaatgtatggggtgtataagggtgtatgggaataaagggtgtctatgtaccattttcc 11347840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 14623916 - 14623757
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||| |||  || | | ||||||| |||||||| |||| ||||| |||||||||||     
T  14623916 taggtggcaatacaccccttgacacccacataaaaatctgacatgtgttcatgtggacctcacacaagcacactttctctttcatcttctcttctctctt 14623817  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||| || |||||||||| | |  |||||  ||||||| | |||||||||||||||||||    
T  14623816 tctagtgcatgaggtgtagaaggatgtatgagaataaatggtgtctatgtaacattttcc 14623757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 19 - 187
Target Start/End: Original strand, 26754718 - 26754886
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |  ||| |||||||||||||||||| ||||||||||| | ||| ||||| |||| ||| |||| | |||||||||||||||     
T  26754718 taggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctctt 26754817  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctttaattaa 187  Q
     |||   |||  ||||||||   |||||| | |||||||  |||||||||||||||||||||| |||||    
T  26754818 cctagaatatagggtgtacaaaggtgtatggaaataaagagtgtctatgtaacattttccttttattaa 26754886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 17470428 - 17470583
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| ||||| || | ||||||||| |||||||| ||||   |||| ||||||||||     
T  17470428 taggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctcttttctctcatcttctctctt 17470527  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| | ||||||  | |||||  ||||||| | |||||||||| ||||    
T  17470528 cctaatgcatgggatgtacaaatatgtatgagaataaatggtgtctatgtatcatt 17470583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 422
Target Start/End: Original strand, 35526503 - 35526681
Alignment:
Q  245 ctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtacca 343  Q
    ||||||| |||||||| ||||||||||||   |||| ||||| |||| ||||||||| ||||| |||| || ||||  |||| || |||||   |||||     
T  35526503 ctctctatgaaaatttgaacaaaagtattaacattcccagatattctattgcaattgcaccaattattttgaatctgccaagacgtctttgttggtaccc 35526602  T
Q  344 ttttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctct 422  Q
    ||||| ||||   ||||||||||||| |||||||| |||||| || |||||||||||||||| ||||||||||| ||||    
T  35526603 ttttgggcacgggtcctcattccggccgagttaaagctagaaggcatcactttgttcacctgcttcttcttcttactct 35526681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 174
Target Start/End: Original strand, 31456710 - 31456867
Alignment:
Q  17 cataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctc 116  Q
    |||||| |||||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||   ||||||||| ||||    
T  31456710 cataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttttctc 31456809  T
Q  117 tcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    |  |||||| ||| |||||||| | ||| || |||||||||| ||| |||||| ||||    
T  31456810 ttcctaatgcatggggtgtacaagggtgcatgggaataaagggtgtttatgtatcatt 31456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 36331406 - 36331247
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||| |||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  36331406 taggtggcaatgcaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 36331307  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||| |||||||| | ||||||   | |||| ||||| |||||||||||||||    
T  36331306 cctaatacatggggtgtacaagggtgtatgcaattaaaagatgtatatgtaacattttcc 36331247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 52629323 - 52629478
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| |||||||| ||||   |||| ||||||||||     
T  52629323 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctctt 52629422  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| | |||||| | |||||| | ||||| || |||||||||| ||||    
T  52629423 cctaatgcatgggatgtacaagggtgtatggaaataatgggtgtctatgtatcatt 52629478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 298 - 432
Target Start/End: Complemental strand, 16893201 - 16893067
Alignment:
Q  298 ttgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttg 397  Q
    ||||||||||||||| | || |  |||||| |||||||| | ||| ||||||||||   ||||||||||||||||||| || |||| | |||||||||||    
T  16893201 ttgaaccaactattcggtatatggcaaggcagctttggaggcacccttttgagcacgggtcctcattccggctgagttgaacctagtaggcttcactttg 16893102  T
Q  398 ttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||| ||||| | |||| | |||||||||||    
T  16893101 ttcacctgcttcttttgctttttatctgccttagt 16893067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 23 - 181
Target Start/End: Complemental strand, 24700027 - 24699870
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||  || ||||||||| ||||||||| ||||||| ||| || | ||   ||||||||||||| |||| | |||||||||||||||  |||    
T  24700027 tggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtggaccctgtacaaacacactttctctttcctctcctcttctctcttccta 24699928  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     | ||||||||||| | |  |||||  ||||||| ||||||||||||||||||||||||    
T  24699927 gtttatgaggtgtataaga-tgtatgagaataaaagatgtctatgtaacattttccttt 24699870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 301 - 430
Target Start/End: Complemental strand, 51524988 - 51524859
Alignment:
Q  301 aaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttc 400  Q
    ||||||||||| ||||||| ||||||  |||||||| |  || ||||| ||||   |||||||||||||||||||||| ||| || || ||||||| | |    
T  51524988 aaccaactattttgcatctgtcaaggtagctttggaggagcccttttgggcacgggtcctcattccggctgagttaaagctataaggcctcactttatgc 51524889  T
Q  401 acctgtttcttcttctttctctctgcctta 430  Q
    ||||| ||||||||||||||||| ||||||    
T  51524888 acctgcttcttcttctttctctcagcctta 51524859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 35536652 - 35536811
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    |||||||||||||  || ||||||||| |||||| |||||||||||||  || | |  |||||| |||||||  |||| ||||| |||||||||||  ||    
T  35536652 gtggcaatacaccatttgacacccacataaaaatgtgacacgtggtcatgtggaccttacacaagcacacttcctctttcatcttctcttctctcttcct 35536751  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
    | || ||| |||||| | | ||||||  ||||||| | ||||||||||||||||||||||    
T  35536752 agtgcatggggtgtagaagggtgtatgagaataaatggtgtctatgtaacattttccttt 35536811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 54868972 - 54868817
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| || || || | ||| ||||| |||||||| ||||   |||| ||||||||||     
T  54868972 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtggaccccgcacaatcacactttctcttttctctcatcttctctctt 54868873  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||  |||||||| | |||||| | |||||| | |||||||||| ||||    
T  54868872 cctaatgcatagggtgtacaagggtgtatggaaataaaaggtgtctatgtatcatt 54868817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 30801802 - 30801648
Alignment:
Q  27 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgt 126  Q
    ||||||||| || | |||||||||||||| ||||| || |||| ||| | ||||||||| |||| ||| |||| | |||| ||||||||||  ||| |      
T  30801802 aatacaccctttgatacccacacaaaaatatgacatgtagtcatatggaccccacacaagcacattttctctttcctctcatcttctctcttcctagtac 30801703  T
Q  127 atgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
    ||| |||||||| | ||||||  ||||||| | ||||||||||||||||||||||    
T  30801702 atggggtgtacaagggtgtatgagaataaaaggtgtctatgtaacattttccttt 30801648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 1758537 - 1758373
Alignment:
Q  17 cataggtggcaatacacccc--ttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctc 114  Q
    ||||||| ||||||||||||  || ||||||||||||||||||||||  |||| || || |  ||||||||||||| ||| |||| ||||||||||||||    
T  1758537 cataggttgcaatacaccccccttgacacccacacaaaaatctgacatatggttacgtggactccacacaaacacattttctctttcatctcctcttctc 1758438  T
Q  115 tctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttta 182  Q
    |||  |||||| ||| ||||||||   ||||||  |||||||   ||| ||||||||||||| |||||    
T  1758437 tcttcctaatgcatg-ggtgtacaaaggtgtat--gaataaacagtgtttatgtaacatttttcttta 1758373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 36707501 - 36707350
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||| || ||| ||||||||||||||||||||| || || || ||||| | ||    |||||| ||||   |||||||||||||||     
T  36707501 taggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtggatcccgcgca----cactttctcttttctctcctcttctctctt 36707406  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| |||||||||||| |  ||||| |||||||| | |||||||||| ||||    
T  36707405 cctaatgcatgaggtgtacaagaatgtatgggaataaaaggtgtctatgtatcatt 36707350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 48375783 - 48375626
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||||| || | ||| |||||||||||||  ||||||||||| | ||| ||||| |||| ||| |||| | |||||||||||||||     
T  48375783 taggtgacaatacacccctgaaaatccatacaaaaatctgacgtgtggtcacatggaccccgcacaagcacattttctctttcctctcctcttctctctt 48375684  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     |||   |||  ||||||||    ||||| | |||||||| |||||||||||||||||    
T  48375683 cctagaatatagggtgtacaaagatgtatggaaataaagggtgtctatgtaacatttt 48375626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 9563053 - 9563177
Alignment:
Q  50 aaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtatag 149  Q
    ||||||||||||||| ||||| || ||||  |||||||||||||| |||    |||||||||||||||  |||||| ||||| ||||||   |||||| |    
T  9563053 aaaaatctgacacgtagtcacgtggatcctgcacaaacacactttctctcttctctcctcttctctcttcctaatgcatgagttgtacaaaggtgtatgg 9563152  T
Q  150 gaataaaggatgtctatgtaacatt 174  Q
    ||||||||| | |||||||| ||||    
T  9563153 gaataaagggtatctatgtatcatt 9563177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 70
Target Start/End: Complemental strand, 11095430 - 11095379
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcac 70  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| |||||    
T  11095430 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcac 11095379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 35093608 - 35093767
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||| |  || ||| |||| ||||||||||||| |||||||  ||||  ||| |||| |||||||| ||||||||||  | ||||||||     
T  35093608 taggtgacaatacaacatttgacatccacgcaaaaatctgacatgtggtcatgtgaactccatacaagcacactttctcttgcatctttttttctctctt 35093707  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||| || ||||| ||||||   ||||||  ||||||| |||||||| ||||||||||||    
T  35093708 cctagtgcatgagatgtacaaaggtgtatgagaataaatgatgtctaggtaacattttcc 35093767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 180
Target Start/End: Original strand, 42823137 - 42823295
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    |||| |||||||||||| ||||||||| |||||| ||||| ||||||| ||| | ||| || ||  | ||||| |||| | | | |||||||||||  ||    
T  42823137 gtggtaatacaccccttgacacccacaaaaaaatttgacatgtggtcatatggaccccgcataagtatactttctctttcttattctcttctctcttcct 42823236  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
    |||  |||||||||||| | ||||||   | |||| | |||||||||||||||||||||    
T  42823237 aatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcctt 42823295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 27714968 - 27714888
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||    
T  27714968 taggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctctt 27714888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 31067241 - 31067165
Alignment:
Q  357 tcctcattccgg-ctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||||| | |||||||||| |||| |||| ||||||||| ||| || |||||||||||| |||||||||||||    
T  31067241 tcctcattcccgactgagttaaagctagcaagcctcactttgtgcacatgcttcttcttctttttctctgccttagt 31067165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 48587168 - 48587088
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    ||||||||||||||||| || ||||| ||| ||||||||||||||| ||||| || ||||| |||||  ||||||| ||||    
T  48587168 taggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggatcccgcacaagtacactttctctt 48587088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 25395407 - 25395312
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||| ||||| ||||||| |||||||||||||||||||| ||||  | ||  | |||||||||||||| ||| |||| ||||| ||||| |||||    
T  25395407 gtggccatacatcccttaatacccacacaaaaatctgacatgtggctatatagaccccacacaaacacattttctctttcatcttctcttttctct 25395312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 26796875 - 26796950
Alignment:
Q  357 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||| || |||||||||| || | |  |||||||||||| || || ||||||||||||||||||||||||||    
T  26796875 tcctcatttcgactgagttaaagctggtagacttcactttgttaacatgcttcttcttctttctctctgccttagt 26796950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 11907394 - 11907488
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttct 113  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||| ||||||| ||| | ||| ||||| |||| ||| ||||   |||||||||||    
T  11907394 taggtgacaatacacacctgaacactcacacaaaaatctgacatgtggtcatatggaccccgcacaagcacattttctcttttctctcctcttct 11907488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 43746422 - 43746524
Alignment:
Q  79 cacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    |||||||||||| ||| |||| ||||||||||||| |||  ||| || |||||||||||| | ||||||   || ||||| ||| ||||||||||||| |    
T  43746422 cacacaaacacaatttctctttcatctcctcttctttcttcctagtgcatgaggtgtacaagggtgtatgacaacaaagggtgtttatgtaacatttttc 43746521  T
Q  179 ttt 181  Q
    |||    
T  43746522 ttt 43746524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 178
Target Start/End: Complemental strand, 21746207 - 21746106
Alignment:
Q  77 cccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
    |||| |||| |||||||| |||| |||||| ||||||||||  | ||| ||||||||||||| | ||||||   |||||| |||||| |||||| |||||    
T  21746207 cccatacaagcacactttctctttcatctcatcttctctcttccaaatatatgaggtgtacaagggtgtatgtaaataaatgatgtccatgtaatatttt 21746108  T
Q  177 cc 178  Q
    ||    
T  21746107 cc 21746106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 180
Target Start/End: Complemental strand, 45058629 - 45058469
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||| |||||||||||| |||  || ||| | ||| |||||  | ||||| |||| | ||| |||||||||||     
T  45058629 taggtggcaatacaccc-ttgacacccacataaaaatctgacatgtgaccatatggaccccgcacaagtatactttctctttcttcttctcttctctctt 45058531  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     |||||  ||| ||||||||   ||||||   | |||| | |||||||||||||||||||||    
T  45058530 cctaatacatggggtgtacaatggtgtatgcaattaaaaggtgtctatgtaacattttcctt 45058469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 117
Target Start/End: Original strand, 41080737 - 41080828
Alignment:
Q  25 gcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    |||| |||||| || |||||||| ||||||||||| | |||||||  || | ||||||||| |||| ||| |||| |||||||||||||||||    
T  41080737 gcaaaacaccctttgacacccacgcaaaaatctgatatgtggtcatgtgga-cccacacaagcacattttctctttcatctcctcttctctct 41080828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 35965843 - 35965700
Alignment:
Q  27 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgt 126  Q
    |||||| || || ||||||||| |||||||||||||||||        ||||  ||||| |||||||| |||| | ||||||||| ||| |   ||||      
T  35965843 aatacatcctttgacacccacataaaaatctgacacgtgg--------atcctgcacaagcacactttctctttcctctcctcttttcttttcttaattc 35965752  T
Q  127 atgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    |||||||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  35965751 atgaggtgtacaagggtgtatgagaataaaaggtgtctatgtaacattttcc 35965700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 49106934 - 49106995
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaattt 260  Q
    ||||||||||||||||||||||   || || |||||||| |||||||||||||| ||||||||    
T  49106934 tcaaaagtatgaccattcttggtctaacaacgactaaaa-gactactctctctatgaaaattt 49106995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 86
Target Start/End: Complemental strand, 25413836 - 25413784
Alignment:
Q  34 cccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 86  Q
    ||||| |||||||||||||| ||||||||||||| || || | ||||||||||    
T  25413836 ccctttacacccacacaaaactctgacacgtggtaacctggaccccacacaaa 25413784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 32605941 - 32605897
Alignment:
Q  69 acatgaatcccacacaaacacactttttcttgcatctcctcttct 113  Q
    ||||| |||| |||||| ||||||||||||| |||||||||||||    
T  32605941 acatggatccaacacaagcacactttttctttcatctcctcttct 32605897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 47190960 - 47191023
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 86  Q
    |||||||||||||| ||| ||||||||||||| ||||||| ||||| || || | ||||||||||    
T  47190960 gtggcaatacacccttta-cacccacacaaaattctgacatgtggtaacttggaccccacacaaa 47191023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 53581792 - 53581835
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  53581792 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 53581835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 2e-44; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 32813270 - 32813429
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||| ||||| |||||||| ||||   |||||||||||||||     
T  32813270 taggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcacatggaccccgcacaagcacactttctcttttctctcctcttctctctt 32813369  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||||||| |||||||| | |||||| |||||||| | |||||||||||||||||||    
T  32813370 cctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcc 32813429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 51898760 - 51898601
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| | || | |||||||||||||||     
T  51898760 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctctt 51898661  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||| || ||| |||||||| | |||||||| |||||||| ||| |||||||||||||||    
T  51898660 cctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 51898601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 37649221 - 37649376
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||| | || ||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||  |||   |||||||||||||||     
T  37649221 taggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtgaattccgcacaagcacactttcccttttctctcctcttctctctt 37649320  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  37649321 cctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 37649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 234 - 432
Target Start/End: Original strand, 13061893 - 13062092
Alignment:
Q  234 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagattt-ctgttgcaattgaaccaactattctgcatctatcaaggcggctt 332  Q
    |||||||||| ||||||| |||||||| ||||||||||||   |||| ||  | | || ||||||||| ||||| ||||||| || | ||||||||||||    
T  13061893 aaaagactaccctctctatgaaaatttgaacaaaagtattaacattcccatctatacttttgcaattggaccaattattctgtatttgtcaaggcggctt 13061992  T
Q  333 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||| ||||  |||| |||||   |||||||| ||||||||||||| ||| || || |||||||||||||||| |||||||||||| |||||| ||||||    
T  13061993 tggaggtactcttttcagcacgggtcctcatttcggctgagttaaagctaaaaggcatcactttgttcacctgcttcttcttctttttctctgtcttagt 13062092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 41758832 - 41758983
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||| || ||| ||||||||||||||||||||| |||||||| | ||| |||||||||||||| ||||   |||||||||||||||  |||    
T  41758832 tggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcacatggaccccgcacaaacacactttctcttttctctcctcttctctcttccta 41758931  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  41758932 atgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 41758983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 208 - 409
Target Start/End: Complemental strand, 14344267 - 14344068
Alignment:
Q  208 gaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaa 306  Q
    ||||||||||||| ||| || |||||||| ||| ||||||||||| |||| || ||||||||||||| ||||| ||||| || | |||||||||| ||||    
T  14344267 gaccattcttggccaaacaacgactaaaa-gaccactctctctaaaaaaaattgaacaaaagtattgatattcccagatattttattgcaattga-ccaa 14344170  T
Q  307 ctattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgt 406  Q
    ||||  || |||| ||||| || ||||||| ||||| |||||  ||| | || ||||||||  |||||||||||||||| ||||||||||||||||||||    
T  14344169 ctata-tgtatctgtcaagtcgactttggaggtacccttttggacacgagtcatcattccgattgagttaaaactagaaggcttcactttgttcacctgt 14344071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 38632398 - 38632253
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||| ||||| || | ||| ||||| |||||||||||||   |||||||||||||||     
T  38632398 taggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttttcttttctctcctcttctctctt 38632299  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtct 164  Q
     |||||| ||| |||||||| | |||||| |||||||||| |||||    
T  38632298 cctaatgcatggggtgtacaagggtgtatgggaataaagggtgtct 38632253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 9474953 - 9474798
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| |||||||||||||| ||||   |||||||||||||||     
T  9474953 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctctt 9474854  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| | |||||| | ||||||  ||||||||  |||||||||| ||||    
T  9474853 cctaatgcatgggatgtacaagggtgtatgagaataaagagtgtctatgtatcatt 9474798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 27564812 - 27564657
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || |||||||||||||||||||||||||  |||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  27564812 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 27564713  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  27564712 cctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 27564657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 45044637 - 45044475
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||||||| |||||||||||||| || | |||||| | ||| |||||||||| ||| ||||   ||| |||||||||||     
T  45044637 taggtggcaatacaccatttgacacccatacaaaaatctgacatgtagccacatggaccccgcacaaacacattttctcttttctcttctcttctctctt 45044538  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     |||||||||| |||||||| | ||||||  ||||||| |||||||| |||||||||||||||    
T  45044537 cctaatgtatggggtgtacaagggtgtatgagaataaatgatgtctacgtaacattttccttt 45044475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 2581938 - 2582093
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| | ||   |||||||||||||||     
T  2581938 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttcttttttctctcctcttctctctt 2582037  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||  |||||||||||| | ||||||  ||||||||| ||| |||||| ||||    
T  2582038 cctaatacatgaggtgtacaagggtgtattagaataaagggtgtttatgtatcatt 2582093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 3000342 - 3000497
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| |||||||| ||||   |||| ||||||||||     
T  3000342 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctctt 3000441  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||||| |||| |||||||| | |||||| | ||||| ||||||||||||| ||||    
T  3000442 cctaatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 3000497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 38595177 - 38595332
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | |||  |||| |||||||| ||||   |||| ||||||||||     
T  38595177 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcacactttctcttttctctcatcttctctctt 38595276  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||||| |||| |||||||| | |||||| | ||||| ||||||||||||| ||||    
T  38595277 cctaatatatggggtgtacaagggtgtatggaaataatggatgtctatgtatcatt 38595332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 48716359 - 48716204
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   | |||||||||||||     
T  48716359 taggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttatcttttctttcctcttctctctt 48716260  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  48716259 cctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 48716204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 26440764 - 26440908
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||| ||||| || || |||||||| ||||          ||||||||   |||||    
T  26440764 caatacaccctttaacacccacacaaaaatctgacacgtggccacatggatcccgcataagcacactttctctt----------ttctctcttcgtaatg 26440853  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
    ||||   |||||| | ||||||||||||||||||||| |||||||||||||||||    
T  26440854 tatggaatgtacaagggtgtataggaataaaggatgtttatgtaacattttcctt 26440908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 47452397 - 47452242
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||||| || |||||||||||||||||| |||||| ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||     
T  47452397 taggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctctt 47452298  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||| || ||| |||||||| |  ||||| |||||||||  |||||||||| ||||    
T  47452297 cctattgcatggggtgtacaaggatgtatgggaataaagagtgtctatgtatcatt 47452242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 293 - 418
Target Start/End: Complemental strand, 3374432 - 3374307
Alignment:
Q  293 tgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttca 392  Q
    ||||||| |||||||||||||| | ||  |||||| ||||||||  |||| ||||| |||||  |||||||||||||||||||||| ||||   ||||||    
T  3374432 tgcaattaaaccaactattctgtagcttccaaggcagctttggagctacccttttgggcacatgtcctcattccggctgagttaaatctagccggcttca 3374333  T
Q  393 ctttgttcacctgtttcttcttcttt 418  Q
    |||||||||| || ||||||||||||    
T  3374332 ctttgttcacttgcttcttcttcttt 3374307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 37926515 - 37926356
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| |  |||||||||||| ||||||||||||||||| |||||| |||||  ||||  ||||||| ||||   ||| |||||||||||     
T  37926515 taggtggcaatacatcttttaacacccacataaaaatctgacacgtggccacatggatcccgtacaagtacactttctcttttctcttctcttctctctt 37926416  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||||||| |||||||| |  |||||  ||||||| | ||||||| ||| |||||||    
T  37926415 cctaatgtatggggtgtacaaggatgtatgtgaataaatggtgtctatataatattttcc 37926356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 22 - 178
Target Start/End: Original strand, 44454005 - 44454165
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    ||||||||||| | ||| | |||||||||||||||||||| ||||| || || ||||||||||| ||||||||||||| | |||| ||||||||||  ||    
T  44454005 gtggcaatacatctcttgatacccacacaaaaatctgacatgtggttacgtggatcccacacaagcacactttttctttcctctcatcttctctcttcct 44454104  T
Q  122 aatgtatgaggt----gtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    |||| ||| |||    ||| | | ||||||| ||||||| | ||| |||||||||||||||    
T  44454105 aatgcatggggtcagagtataagggtgtataagaataaatggtgtttatgtaacattttcc 44454165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 50591077 - 50590918
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  50591077 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 50590978  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||| |||||||| | ||||||   | |||| | | |||||||||||||||||    
T  50590977 cctaatacatggggtgtacaagggtgtatgcaattaaaaggtatctatgtaacattttcc 50590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 5959074 - 5958916
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    ||||||||||||| ||| |||||||||||||||||||||| ||||||| ||| | ||| |||||  ||||||| |||| | ||| |||||||||||  ||    
T  5959074 gtggcaatacacctcttgacacccacacaaaaatctgacatgtggtcatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcct 5958975  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
    |||  ||| |||||||| | ||||||   | ||||   |||||||||||||||||||||    
T  5958974 aatacatggggtgtacaagggtgtatgcaattaaaatgtgtctatgtaacattttcctt 5958916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 294 - 432
Target Start/End: Original strand, 17114707 - 17114844
Alignment:
Q  294 gcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcac 393  Q
    ||||||||||||||||||||  | ||  |||||| |||||||| ||||| |||||  ||    ||||||||| ||| |||||||| |||| | |||||||    
T  17114707 gcaattgaaccaactattctatagctg-caaggccgctttggaggtacccttttggacatgggtcctcattctggcagagttaaagctagcaggcttcac 17114805  T
Q  394 tttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||| |||||||||||||||||||||| ||||||    
T  17114806 tttgttcacatgtttcttcttctttctctctgtcttagt 17114844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 176
Target Start/End: Complemental strand, 49811604 - 49811447
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||  || ||| ||||||||||||||||||||| | || ||  |  || ||||| |||||||| ||||   |||||||||||||||     
T  49811604 taggtgacaatacaccatttgacatccacacaaaaatctgacacgtagccatatagactccgcacaagcacactttctcttttctctcctcttctctctt 49811505  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     |||||||||| |||| ||| | ||||||  ||||||||| |||||||||||||||||    
T  49811504 cctaatgtatgtggtgcacaagggtgtatgagaataaagggtgtctatgtaacatttt 49811447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 287 - 432
Target Start/End: Original strand, 50903467 - 50903612
Alignment:
Q  287 ttctgttgcaattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaa 386  Q
    |||| ||||||| |||||||||| || | || |  |||| |||||||||| |||||  |||| ||||   |||||||| |||||||||| || |||| |     
T  50903467 ttctcttgcaatggaaccaactaatcggtatatgccaagtcggctttggaggtaccgctttgggcacgggtcctcatttcggctgagttgaagctagtag 50903566  T
Q  387 gcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  50903567 gcttcactttgttcacctgcttcttctgctttcactctgccttagt 50903612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 43162 - 43310
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| || || ||||||||||||||||||||||||| ||||| || |  || ||||| |||||||| ||||   ||||||| |||||||  ||||||    
T  43162 caatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggactccgcacaagcacactttctcttttctctcctcctctctctttctaatg 43261  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||| |||||||| | ||||||| ||||||||| | |||||||| ||||    
T  43262 catggggtgtacaagagtgtataagaataaagggtatctatgtatcatt 43310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 44163661 - 44163744
Alignment:
Q  201 aaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat 286  Q
    |||||||||||||||||||| ||| || |||||||||  ||||||||||||||||||| | | ||||||||||||||||| |||||    
T  44163661 aaagtatgaccattcttggccaaacaacgactaaaaa--ctactctctctaagaaaatatgatcaaaagtattggtattcccagat 44163744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 167
Target Start/End: Original strand, 50630481 - 50630629
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| || ||   ||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  50630481 taggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 50630580  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatg 167  Q
     |||||| ||  |||||||| | ||||||  ||||||| | ||||||||    
T  50630581 cctaatgcatagggtgtacaagggtgtatgagaataaatggtgtctatg 50630629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 3302589 - 3302450
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacag 139  Q
    |||||||||||||||||||||||||  ||| ||| | |||| |||| |||||||| | || |||||| ||||||||||  | ||| |||  ||||||||     
T  3302589 acacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctttttcatctcatcttctctcttccaaatatatagggtgtacaa 3302490  T
Q  140 gtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    | ||||||   |||||||||||| ||| ||||||||||||    
T  3302489 gggtgtatgttaataaaggatgtttatataacattttcct 3302450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 430
Target Start/End: Original strand, 41035080 - 41035153
Alignment:
Q  357 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgcctta 430  Q
    |||||||||||||||||||||| |||||| ||||||   | |||||||| |||||||||||| |||||||||||    
T  41035080 tcctcattccggctgagttaaagctagaaggcttcaaaatattcacctgcttcttcttctttttctctgcctta 41035153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 180
Target Start/End: Original strand, 47748466 - 47748626
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||| | |||||||||||| |||| || ||| ||||| |||||  | ||||| |||| | ||| |||||||||||     
T  47748466 taggtggcaatacaccc-ttgacacccatataaaaatctgacatgtggccatatggatcccgcacaagtatactttctctttcttcttctcttctctctt 47748564  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     |||||  ||| |||||||| | ||||||   | |||| | |||||||||||||||||||||    
T  47748565 cctaatacatggggtgtacaagagtgtatgcaattaaaaggtgtctatgtaacattttcctt 47748626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 432
Target Start/End: Original strand, 49491873 - 49492009
Alignment:
Q  295 caattgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcact 394  Q
    |||||||||||||||||| | ||    ||||||  ||||||| ||||| ||||| ||||   ||||||||||||||||||| || |||| | ||| ||||    
T  49491873 caattgaaccaactattcggtatacgccaaggcaactttggaggtacccttttgggcacgggtcctcattccggctgagttgaagctagtaggct-cact 49491971  T
Q  395 ttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||| || ||||||| ||||||| ||||||||||    
T  49491972 ttgttcacatgcttcttctgctttctccctgccttagt 49492009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 41608570 - 41608411
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||| ||||||||||||||||| |||| || ||| | |||  ||||  ||||||| |||| | ||| |||||||||||     
T  41608570 taggtggcaatacaccccttgacactcacacaaaaatctgacatgtggccatatggaccccgtacaagtacactttctctttcttcttctcttctctctt 41608471  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||  |||||||| | ||||||   | |||| | ||| |||||||||||||||    
T  41608470 cctaatacatagggtgtacaagggtgtatgcaattaaaaggtgtttatgtaacattttcc 41608411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 130
Target Start/End: Complemental strand, 44548453 - 44548342
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || | ||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||| ||||||||||     
T  44548453 taggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcttcttctctctt 44548354  T
Q  119 actaatgtatga 130  Q
     |||||| ||||    
T  44548353 cctaatgcatga 44548342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 86
Target Start/End: Original strand, 750239 - 750302
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 86  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||| ||||| | ||||||||||    
T  750239 gtggcaatacacccttta-cacccacacaaaattctgacacgtggtaacatggaccccacacaaa 750302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 8346465 - 8346385
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||  ||||| |||||||| ||||    
T  8346465 taggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccctgcacaagcacactttctctt 8346385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 6260893 - 6261052
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||||||| |||||||||| |||||||| ||| |||||||| || | ||| || || |||| ||| | || | |||||||||||||||     
T  6260893 taggtggtaatacacccctgaacacccacataaaaatctaacatgtggtcacgtggaccccgcataagcacattttctatttcttctcctcttctctctt 6260992  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||| | |||  ||||||||   ||||||   |||||| | ||| |||||||||||||||    
T  6260993 tctagtatatagggtgtacaaaggtgtatgaaaataaatggtgtgtatgtaacattttcc 6261052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 19394182 - 19394257
Alignment:
Q  357 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||||| ||| ||||||| | |||| ||||||||||| |||| || |||||||||||| ||||||| |||||    
T  19394182 tcctcattccagctaagttaaagcaagaaggcttcactttgctcacatgcttcttcttctttttctctgctttagt 19394257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 11152455 - 11152293
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |  ||| ||||||||||||||||||||| ||||  |  | ||| ||||| ||| |||| | || | |||||||||||||||     
T  11152455 taggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtcatgtagaccccgcacaagcacgctttctttttcctctcctcttctctctt 11152356  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     | | || ||| |||||| | |  |||||  ||||||| | ||||||| ||||||||||||||    
T  11152355 cccagtgcatggggtgtagaaggatgtatgagaataaatggtgtctatataacattttccttt 11152293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 26 - 99
Target Start/End: Original strand, 13414791 - 13414864
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    |||||||||| || |||||||||||||||||| |||||| ||||| || | ||||||||| |||| ||| ||||    
T  13414791 caatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccacacaagcacattttctctt 13414864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 22 - 174
Target Start/End: Original strand, 26274458 - 26274607
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    ||||||||||| |  || ||| ||||| ||||||||||||| | ||||| || ||||  |||||  ||||||||||||   ||| |||||||||||  ||    
T  26274458 gtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtggatcctgcacaagtacactttttctt--ttct-ctcttctctcttcct 26274554  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    |||| ||||| || ||| | |||||| |||||||||| |||||||||| ||||    
T  26274555 aatgcatgagatgcacaagggtgtatgggaataaagggtgtctatgtatcatt 26274607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 4401494 - 4401451
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  4401494 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 4401451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 7447991 - 7447948
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  7447991 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 7447948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 50448194 - 50448237
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  50448194 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 50448237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 6e-38; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 23 - 179
Target Start/End: Complemental strand, 43414654 - 43414498
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    |||||| |||||| || |||||||||||||||||| ||||||||||||||| ||||| ||||| |||||||| ||||   |||||||||||||||  |||    
T  43414654 tggcaacacaccctttgacacccacacaaaaatctaacacgtggtcacatggatcccgcacaagcacactttctcttttctctcctcttctctcttccta 43414555  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    ||||||| |||||||| | |||||| | |||||||| ||||||||||||||||||||    
T  43414554 atgtatggggtgtacaagggtgtatggcaataaagggtgtctatgtaacattttcct 43414498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 19 - 177
Target Start/End: Original strand, 5957853 - 5958011
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| |||| | |||||||||||||||     
T  5957853 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaatcacactttctctttcctctcctcttctctctt 5957952  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
     ||| || |||||||||||| | ||||||  ||||||||| ||| ||||||||||||||    
T  5957953 cctagtgcatgaggtgtacaagggtgtatgagaataaagggtgtttatgtaacattttc 5958011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 37038502 - 37038661
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| | || | |||||||||||||||     
T  37038502 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctatttcctctcctcttctctctt 37038601  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||| || ||| |||||||| | |||||||| |||||||| ||| |||||||||||||||    
T  37038602 cctagtgcatggggtgtacaagggtgtatagaaataaagggtgtttatgtaacattttcc 37038661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 19 - 179
Target Start/End: Complemental strand, 15048258 - 15048098
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgc-atctcctcttctctct 117  Q
    ||||||||||||||||| || ||||| ||||||||||||||||||| | |||||| | ||| ||||| |||||||| ||||   ||||||||||||||||    
T  15048258 taggtggcaatacaccctttgacacc-acacaaaaatctgacacgtagccacatggaccccgcacaagcacactttctctttttatctcctcttctctct 15048160  T
Q  118 cactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
      |||||||||| | |||||| | |||||| |||||||||| ||||||| ||||||||||||    
T  15048159 tcctaatgtatgggatgtacaagggtgtatcggaataaagggtgtctatataacattttcct 15048098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 14547945 - 14548100
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  14547945 taggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 14548044  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| |  ||||| |||||||||| |||||||||| ||||    
T  14548045 cctaatgcatggggtgtacaaggatgtatgggaataaagggtgtctatgtatcatt 14548100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 298 - 430
Target Start/End: Original strand, 27786783 - 27786915
Alignment:
Q  298 ttgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttg 397  Q
    |||||||||||||| || |||| ||||||  |||||||| | ||||||||| ||||   |||||||||||||||||||||| |||||| ||||||||||     
T  27786783 ttgaaccaactattttgtatctgtcaaggtagctttggaggaaccattttgggcacggctcctcattccggctgagttaaagctagaaggcttcacttta 27786882  T
Q  398 ttcacctgtttcttcttctttctctctgcctta 430  Q
    |||| ||| || |||||||||||||| ||||||    
T  27786883 ttcatctgcttattcttctttctctccgcctta 27786915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 19 - 175
Target Start/End: Complemental strand, 40424020 - 40423864
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||| ||||  || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  40424020 taggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcatgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 40423921  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattt 175  Q
     |||||  |||||||||||| | |||||| |||||||| | |||||||||| |||||    
T  40423920 cctaatacatgaggtgtacaagggtgtatgggaataaaaggtgtctatgtatcattt 40423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 4854940 - 4854781
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |||||||| ||| |||||||||| | |||| |||||| | ||  ||||| |||||||| ||||   |||||||||||||||     
T  4854940 taggtggcaatacaccctttaacacctacataaaaatctgatatgtggccacatggaccctgcacaagcacactttctcttttctctcctcttctctctt 4854841  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    ||||||||||| | |||||| | || |||  ||||||||  |||||||||||||||||||    
T  4854840 actaatgtatgggatgtacaagggtatatgagaataaagagtgtctatgtaacattttcc 4854781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 8841509 - 8841350
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||| ||||||| || |||||||||||||||||| |||||| ||||| || | ||| ||||| |||||||| |||| | ||||||||||||| |     
T  8841509 taggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctctttcctctcctcttctctttt 8841410  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||| || ||| |||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  8841409 cctagtgcatggggtgtacaagagtgtatgagaataaatggtgtctatgtaacattttcc 8841350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 12831070 - 12831225
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  12831070 taggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 12831169  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | ||||||  ||||||| | |||||||||| ||||    
T  12831170 cctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgtatcatt 12831225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 15197356 - 15197511
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   ||||||||| |||||     
T  15197356 taggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttttctctt 15197455  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     | |||| |||||||||||| | |||||| ||||||||   |||||||||| ||||    
T  15197456 ccaaatgcatgaggtgtacaagggtgtatgggaataaaaagtgtctatgtatcatt 15197511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 234 - 432
Target Start/End: Complemental strand, 29369292 - 29369093
Alignment:
Q  234 aaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgcaattgaaccaactattctgcatctatcaaggcggctt 332  Q
    |||||||||| ||||||| |||||||| |||||||| ||||  |||||| ||| ||||  |||||||| ||||||||||||| ||||  |||||||| ||    
T  29369292 aaaagactaccctctctatgaaaatttgaacaaaagcattgacattctcggatattctaatgcaattggaccaactattctgtatctgccaaggcggatt 29369193  T
Q  333 tggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||| ||| | ||||| ||||   ||||||||| |||| ||||||| || ||| || ||||||| ||||| || |||||||||||| ||| || ||||||    
T  29369192 tggatgtatccttttgggcacgggtcctcattctggctcagttaaagcttgaaggcatcactttattcacgtgcttcttcttctttatctttgtcttagt 29369093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 34012373 - 34012218
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||||| || |||||||||||||||| |||||||| ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||     
T  34012373 taggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctctt 34012274  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||   ||||||||| |||||||||| ||||    
T  34012273 cctaatgcatggggtgtacaagggtgtacgagaataaagggtgtctatgtatcatt 34012218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 34307239 - 34307394
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||||| ||| |||||  ||||||| |||| | ||| |||||||||||     
T  34307239 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggacatatgaaccccgcacaagtacactttctctttcttcttctcttctctctt 34307338  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||||| |||| |||||||| | ||||||   | |||| | |||||||||||||||    
T  34307339 cctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 34307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 40 - 174
Target Start/End: Original strand, 9122229 - 9122363
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacag 139  Q
    |||||||||||||||||||||| || ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||  |||||| ||| ||||||||     
T  9122229 acacccacacaaaaatctgacatgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctcttcctaatgcatggggtgtacaa 9122328  T
Q  140 gtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    | |||||| ||||||||| ||||||||||| ||||    
T  9122329 gagtgtatgggaataaagaatgtctatgtatcatt 9122363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 504198 - 504043
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||| ||||| ||||| || ||||   |||| ||||||||||     
T  504198 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacacattctcttttctctcatcttctctctt 504099  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  504098 cctaatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 504043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 166
Target Start/End: Complemental strand, 1180017 - 1179870
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| ||||  || || || ||||| |||||||| ||||   |||||||||||||||     
T  1180017 taggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtcatgtggattccgcacaagcacactttctcttttctctcctcttctctctt 1179918  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctat 166  Q
     |||||| ||| |||||||| |  | ||| ||||||||||||||||||    
T  1179917 cctaatgcatggggtgtacaaggatatatgggaataaaggatgtctat 1179870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 22 - 174
Target Start/End: Complemental strand, 23122671 - 23122519
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    |||||||||||||  || ||||||||||||||||||||||||| ||||| || | ||| || || |||||||| ||||   |||||| ||||||||  ||    
T  23122671 gtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcataagcacactttctcttttctctcctgttctctcttcct 23122572  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    |||| ||| |||||||| | ||||||  ||||||||| |||||||||| ||||    
T  23122571 aatgcatggggtgtacaagggtgtatgagaataaagggtgtctatgtatcatt 23122519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 178
Target Start/End: Complemental strand, 10284701 - 10284549
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    |||||||| | || |||||||||||||||| |||||||| ||||| || | ||| ||||| |||||||| |||| | | || ||||||||||  ||| ||    
T  10284701 caatacactctttgacacccacacaaaaatttgacacgtagtcacgtggaccccgcacaagcacactttctctttcctttcatcttctctcttcctagtg 10284602  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     ||| |||||||| |  |||||| ||||||| | |||||||||||||||||||    
T  10284601 catggggtgtacaaggttgtataagaataaaaggtgtctatgtaacattttcc 10284549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 42221538 - 42221698
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||  |||  |||||||||||||||||||||||||  ||| ||| | |||| |||| |||||||| |||| |||||| ||||||||||     
T  42221538 taggtgacaatacattcctggacacccacacaaaaatctgacacgtaatcatatggaccccatacaagcacactttctctttcatctcatcttctctctt 42221637  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     | ||| |||  |||||||| | ||||||   |||||||||||| ||| ||||||||||||    
T  42221638 ccaaatatatagggtgtacaagggtgtatgtaaataaaggatgtttatataacattttcct 42221698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 138
Target Start/End: Original strand, 16383400 - 16383519
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  16383400 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 16383499  T
Q  119 actaatgtatgaggtgtaca 138  Q
     |||||  ||| ||||||||    
T  16383500 cctaatacatggggtgtaca 16383519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 10621164 - 10621066
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||| ||||||||| || ||||||||||||||||||||||||| | |||||  ||||| ||||| |||||||| ||||   |||||||||||||||    
T  10621164 taggtggtaatacaccctttgacacccacacaaaaatctgacacgtagccacatcgatcccgcacaagcacactttctcttttctctcctcttctctct 10621066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 17443848 - 17444005
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||||||  |||||||| ||||||||||||||||| || ||||  || | |||||||||| ||||||| |||| ||||| |||||||||||     
T  17443848 taggtgacaatacacttcttaacactcacacaaaaatctgacatgtagtcatgtggaccccacacaaagacactttctctttcatcttctcttctctctt 17443947  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     | | || ||||| |||||| |  |||||    ||||||| |||||||||||||||||    
T  17443948 cccagtgcatgagttgtacaaggatgtattcttataaagggtgtctatgtaacatttt 17444005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 360 - 432
Target Start/End: Original strand, 399778 - 399850
Alignment:
Q  360 tcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    |||||||| |||| ||||| |||| || | ||||||||||||| |||||||||||||||||||||||||||||    
T  399778 tcattccgactgaattaaagctagcaaacctcactttgttcacatgtttcttcttctttctctctgccttagt 399850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 24307870 - 24307715
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| ||||| |||||||||||||||||||| | |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  24307870 taggtggcaatacatcccttgacacccacacaaaaatctgatatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 24307771  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||  ||| |||||||| | ||||||   | |||| | |||||||||||||||    
T  24307770 cctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 24307715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 50 - 181
Target Start/End: Complemental strand, 42354634 - 42354503
Alignment:
Q  50 aaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtatag 149  Q
    |||||||||||||||| |||  || ||| |||| || |||||||| |||| ||||| |||||||||||  ||| || ||| |||||| | | ||||||      
T  42354634 aaaaatctgacacgtgttcatgtggatctcacataagcacactttctctttcatcttctcttctctcttcctagtgcatggggtgtagaagggtgtatga 42354535  T
Q  150 gaataaaggatgtctatgtaacattttccttt 181  Q
    ||||||| | ||||||||||||||||||||||    
T  42354534 gaataaatggtgtctatgtaacattttccttt 42354503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 44507164 - 44507010
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| ||||||| | |||||||||||||||||||||||||||| ||||| || | |||  |||| || ||||| ||||   |||| ||||||||||     
T  44507164 taggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtggaccccgtacaagcatactttctcttttctctcatcttctctctt 44507065  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | ||||||  |||||||  ||||||||||| ||||    
T  44507064 cctaatgcatggggtgtacaagggtgtatgagaataaa-tatgtctatgtatcatt 44507010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 16056471 - 16056322
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| ||||| |||||||||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||  |||||     
T  16056471 caatacatcccttgacacccacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctcttcctaata 16056372  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattt 175  Q
     ||| |||||||| | ||||||   | |||| | ||||||||||||||||    
T  16056371 catggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattt 16056322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 344 - 432
Target Start/End: Original strand, 8831264 - 8831352
Alignment:
Q  344 ttttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||   |||||||||||||||||||||| |||| | || ||||||||||||  || |||||||||| | |||||||||||||    
T  8831264 ttttgagcacgggtcctcattccggctgagttaaagctagcaggcctcactttgttcatgtgcttcttcttctctttctctgccttagt 8831352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 429
Target Start/End: Original strand, 36206475 - 36206547
Alignment:
Q  357 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgcctt 429  Q
    ||||||||||| || ||||||| |||||| |||||||||| ||||  || |||||||||||||||||||||||    
T  36206475 tcctcattccgactaagttaaagctagaaggcttcactttattcatttgcttcttcttctttctctctgcctt 36206547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 32032748 - 32032906
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| || || ||| |||||||||||||||||| |||| || ||| ||||  |||||  ||||||| |||| |  || |||||||||||     
T  32032748 taggtggcaatacatcc-ttgacatccacacaaaaatctgacatgtggccatatggatcctgcacaagtacactttctctttctccttctcttctctctt 32032846  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  |||||||||||| | ||||||   | |||| | |||||||||||||||||||    
T  32032847 cctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 32032906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 23 - 180
Target Start/End: Complemental strand, 15259002 - 15258845
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    |||||||||| ||||  ||| ||||| |||||||||||| |||||||| || | ||  ||||| |||| ||| |||| | |||||||||||||||  |||    
T  15259002 tggcaatacatccctggacatccacataaaaatctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctcttccta 15258903  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
       |||  | ||||||   |||||| | |||||||| |||||||||||||||||||||    
T  15258902 gaatataggatgtacaaaagtgtatggaaataaagggtgtctatgtaacattttcctt 15258845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 82 - 177
Target Start/End: Original strand, 25838275 - 25838370
Alignment:
Q  82 acaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
    |||| |||||||||||||   ||||||||||||| |  |||||||||  |||||||| |  ||||| | |||||||||| ||||||||||||||||    
T  25838275 acaagcacactttttcttttctctcctcttctcttttgctaatgtatagggtgtacaaggttgtatggcaataaaggatatctatgtaacattttc 25838370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 30479551 - 30479396
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||| ||||| |||||||||||| ||||  | ||| | | | |||||  ||||||| |||| | ||| |||||||||||     
T  30479551 taggtggcaatacaccctttgacatccacataaaaatctgacatgtggctatatggacctcgcacaagtacactttctctttcttcttctcttctctctt 30479452  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||  |||||||||||| | ||||||   | |||| | |||||||||||||||    
T  30479451 cctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatt 30479396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 103 - 174
Target Start/End: Complemental strand, 42710287 - 42710216
Alignment:
Q  103 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    |||||||||||||||  |||||||||| |||||||| | |||||| |||||||||| ||||| |||| ||||    
T  42710287 tctcctcttctctcttcctaatgtatggggtgtacaagggtgtatgggaataaagggtgtctgtgtatcatt 42710216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 86
Target Start/End: Complemental strand, 2547162 - 2547099
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 86  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||  || || ||||||||||||    
T  2547162 gtggcaatacacccttta-cacccacacaaaattctgacacgtggcaacttggatcccacacaaa 2547099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 432
Target Start/End: Original strand, 28225768 - 28225843
Alignment:
Q  357 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||||||||||||||  ||  || |||||||||| |||| || |||||||| | ||||||| |||||||    
T  28225768 tcctcattccggctgagttaaagttaacaaacttcactttgatcacatgcttcttcttttctctctctaccttagt 28225843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 86
Target Start/End: Original strand, 2165908 - 2165960
Alignment:
Q  34 cccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaa 86  Q
    ||||| |||||||||||||| ||||||||||||  || |||| ||||||||||    
T  2165908 ccctttacacccacacaaaattctgacacgtggcaacctgaaccccacacaaa 2165960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 19 - 59
Target Start/End: Original strand, 24307652 - 24307692
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctga 59  Q
    |||||||||||||| || || ||||||||||||||||||||    
T  24307652 taggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 29705528 - 29705485
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  29705528 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 29705485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 1006 - 848
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||| ||||| |||||||| ||||| |||||||| |||| | |||||||||||||||     
T  1006 taggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctctt 907  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
     ||| || ||| |||||||| | |||||| |||||||||| ||| ||||||||||||||    
T  906 cctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 19 - 177
Target Start/End: Complemental strand, 1006 - 848
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||| ||||| |||||||| ||||| |||||||| |||| | |||||||||||||||     
T  1006 taggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtgaatcccgcacaagcacactttctctttcctctcctcttctctctt 907  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
     ||| || ||| |||||||| | |||||| |||||||||| ||| ||||||||||||||    
T  906 cctagtgcatggggtgtacaagagtgtatgggaataaagggtgtttatgtaacattttc 848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 9e-37; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 198 - 363
Target Start/End: Complemental strand, 34548104 - 34547939
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctcagat-ttctgttgca 296  Q
    |||||||||||||||||||||||  || || |||||||| |||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||||    
T  34548104 tcaaaagtatgaccattcttggcctaacaacgactaaaa-gactactctctctatgaaaatttgcacaaaagtattggtattctcagatattctgttgca 34548006  T
Q  297 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcat 363  Q
     ||||||||||||||||| |||   ||| | || |||||| ||||| |||||||||||| |||||||    
T  34548005 cttgaaccaactattctgtatcggccaaagaggttttggaggtacccttttgagcacaagtcctcat 34547939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 22 - 181
Target Start/End: Original strand, 35522902 - 35523061
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcact 121  Q
    |||||||||||||  |||||||||||||||||||||||||||||| || ||| ||||| ||||| |||||||| ||||   |||| ||||||||||  ||    
T  35522902 gtggcaatacaccatttaacacccacacaaaaatctgacacgtggccatatggatcccgcacaagcacactttctcttttctctcttcttctctcttcct 35523001  T
Q  122 aatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
    |||||||| |||||||| | |||||| |||||||| | ||| ||||||||||||||||||    
T  35523002 aatgtatggggtgtacaagggtgtatgggaataaatggtgtttatgtaacattttccttt 35523061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 19 - 178
Target Start/End: Complemental strand, 46033878 - 46033719
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  || ||||| || | ||| ||||   ||||||||||||| |     
T  46033878 taggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcacatgaactccgcacaagcatattttctcttttctctcctcttctctatt 46033779  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||||||| |||||||| | ||||||  ||||||| | |||||||||||||||||||    
T  46033778 cctaatgtatggggtgtacaagggtgtatgagaataaatggtgtctatgtaacattttcc 46033719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 26 - 177
Target Start/End: Complemental strand, 16374894 - 16374743
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| ||||| ||| ||||||||||||||||||||||||||| || ||| ||||||| ||||| || |||| |||||| | ||||||||  ||||||    
T  16374894 caatacatcccttgacatccacacaaaaatctgacacgtggtcacgtggatctcacacaagcacacattctctttcatctctttttctctcttcctaatg 16374795  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
    ||||  |||||||   ||||||  ||||||||| ||||||||||||||||||    
T  16374794 tatggagtgtacaaaggtgtatgagaataaagggtgtctatgtaacattttc 16374743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 19329865 - 19330020
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||  || |||||||||||||||||||||||||  |||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  19329865 taggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 19329964  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  19329965 cctaatgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 19330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 23 - 174
Target Start/End: Complemental strand, 4999587 - 4999436
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||  || |||||||||||||||||||| |||| ||||| || | ||| |||||||||||||| ||||  ||||||||||||||||  |||    
T  4999587 tggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtggaccccgcacaaacacactttctcttttatctcctcttctctcttccta 4999488  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||| ||| |||||||| | ||||||  ||||||| | |||||||||| ||||    
T  4999487 atgcatggggtgtacaagggtgtatgagaataaaaggtgtctatgtatcatt 4999436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 7389412 - 7389566
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||| | || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   ||||||  |||||||     
T  7389412 taggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctactctctctt 7389511  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||  ||| |||||||||| |||||| ||||||||||||||||||||| ||||    
T  7389512 cctaatacatggggtgtacagg-gtgtatgggaataaaggatgtctatgtatcatt 7389566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 8080460 - 8080305
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || ||||| ||| ||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  8080460 taggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 8080361  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||| || ||| |||||||| | |||||| |||||||||| |||||||||| ||||    
T  8080360 cctattgcatggggtgtacaagggtgtatgggaataaagggtgtctatgtatcatt 8080305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 32564503 - 32564341
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||  | ||| | ||| |||||| ||||||| |||| | ||| |||||||||||     
T  32564503 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtggctatatggaccccgcacaaatacactttctctttcttcttctcttctctctt 32564404  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     |||||  |||||||||||| | ||||||   | ||||  ||||||||||||||| |||||||    
T  32564403 cctaatacatgaggtgtacaagggtgtatgcaattaaaatatgtctatgtaacatcttccttt 32564341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 22343384 - 22343543
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| |||||||||||||||||||||| |||  || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  22343384 taggtggcaatacaccccttgacacccacacaaaaatctgacatgtgaccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 22343483  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  |||||||||||| | ||||||   | |||| | |||||||||||||||||||    
T  22343484 cctaatacatgaggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 22343543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 38837240 - 38837395
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| |  ||||| ||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||     
T  38837240 taggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctctt 38837339  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| | |||||| | |||||| | |||||||| |||||||||| ||||    
T  38837340 cctaatgcatgggatgtacaagggtgtatggaaataaagggtgtctatgtatcatt 38837395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 18207203 - 18207300
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    |||||||||||||||| ||| ||||||| |||||||||| |||||||| ||| |||| ||||||||| |||||||| |||| |||||||||||||||||    
T  18207203 taggtggcaatacacctcttgacacccatacaaaaatctaacacgtgg-cacgtgaaccccacacaagcacactttctctttcatctcctcttctctct 18207300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 31735907 - 31736060
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||| | ||||||||||||||||       ||||||| |||||| ||||| ||||| |||||||| ||||   |||||||||||||||     
T  31735907 taggtggcaatacactctttaacacccacacaaa-------cacgtggccacatggatcccgcacaagcacactttctcttttctctcctcttctctctt 31735999  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     |||||||||| |||||||| | |||||| |||||||| | | ||||| ||||||||||||    
T  31736000 cctaatgtatggggtgtacaagggtgtatgggaataaaaggtatctatctaacattttcct 31736060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 41915764 - 41915921
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| ||||| |||||||||||||||| |||| || ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  41915764 taggtggcaatacaccccttgacacctacacaaaaatctgacatgtggccatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 41915863  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     ||||| |||| |||||||| | ||||||   | |||| | |||||||||||||||||    
T  41915864 cctaatatatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacatttt 41915921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 3784018 - 3784158
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| |  || ||||||||||||||||||||||||| ||||| || ||||| ||||| |||||||| ||||   |||||||||||||||     
T  3784018 taggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcacaagcacactttctcttttctctcctcttctctctt 3784117  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaagga 159  Q
     |||||| ||| |||||||| |  |||||  ||||||||||    
T  3784118 cctaatgcatggggtgtacaagaatgtatgtgaataaagga 3784158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 179
Target Start/End: Original strand, 21234424 - 21234584
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||| || |||| ||||||||||| |||||||| | |||||| | ||| ||||| |||| ||| |||| | |||||| | ||||||     
T  21234424 taggtgacaatacaccctttgacactcacacaaaaatttgacacgtagccacatgtaccccgcacaagcacattttctcttacctctcctttcctctctt 21234523  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
     |||||||||| ||||||||   ||||||  ||||||| | ||||||||||||||||||||    
T  21234524 cctaatgtatggggtgtacaatggtgtatgagaataaaaggtgtctatgtaacattttcct 21234584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 35137556 - 35137684
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||||||||||||||||| |||||| ||||| || | ||| |||||||||||||| ||||   |||||||||||||||     
T  35137556 taggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtggaccccgcacaaacacactttctcttttctctcctcttctctctt 35137655  T
Q  119 actaatgtatgaggtgtacaggtgtgtat 147  Q
     |||||| ||| | |||||| | ||||||    
T  35137656 cctaatgcatgggatgtacaagggtgtat 35137684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 8238236 - 8238398
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||||| || |||||||||||||||||||||| || |||| ||| | ||| |||||  ||||||| |||| | ||| |||||||||||     
T  8238236 taggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcatatggaccccgcacaagtacactttctctttcttcttctcttctctctt 8238335  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     |||||  ||| |||||||| | ||||||   | |||| |  |||||||||||||||||||||    
T  8238336 cctaatacatggggtgtacaagggtgtatgcaattaaaaggcgtctatgtaacattttccttt 8238398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 19 - 147
Target Start/End: Original strand, 3694390 - 3694518
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||  |||||||||||||||||||||||||||| ||||  || ||||| ||||| |||||||| ||||   |||||||||||||||     
T  3694390 taggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtcatgtggatcccgcacaagcacactttctcttttctctcctcttctctctt 3694489  T
Q  119 actaatgtatgaggtgtacaggtgtgtat 147  Q
     | |||| ||| |||||||| | ||||||    
T  3694490 cccaatgcatggggtgtacaagagtgtat 3694518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 325 - 417
Target Start/End: Original strand, 19407866 - 19407958
Alignment:
Q  325 ggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctt 417  Q
    |||||||||||| ||||| ||||| ||||   |||||||||||||||||||||| |||||| |  |||||||||||||||| |||||||||||    
T  19407866 ggcggctttggaggtacccttttgggcacgggtcctcattccggctgagttaaagctagaaggaatcactttgttcacctgcttcttcttctt 19407958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 177
Target Start/End: Complemental strand, 2318322 - 2318160
Alignment:
Q  17 cataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctc-- 114  Q
    |||||||||||| ||||| ||| |||||||||||||||||||||  |||||||| || | || ||| || || ||||| |||| |||||| |||||||      
T  2318322 cataggtggcaagacacctcttgacacccacacaaaaatctgacgtgtggtcacgtggacccgacataagcatactttctctttcatctcatcttctctc 2318223  T
Q  115 tctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
    |||| |||||| |||  |||||||   |||||| | |||||||  ||||||||||||||||||    
T  2318222 tctctctaatgcatggagtgtacaaaggtgtatggaaataaagtgtgtctatgtaacattttc 2318160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 297 - 432
Target Start/End: Original strand, 26449531 - 26449666
Alignment:
Q  297 attgaaccaactattctgcatctatcaaggcggctttggaagtaccattttgagcacaaatcctcattccggctgagttaaaactagaaagcttcacttt 396  Q
    |||||||||||||||  | || | || |||| | |||||| ||||| |||||  ||| | ||||||||||||||||| | || |||| | |||||||| |    
T  26449531 attgaaccaactatttggtatatgtcgaggcagttttggaggtacccttttggacacgagtcctcattccggctgagctgaagctagtaggcttcactct 26449630  T
Q  397 gttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||| ||||||| ||||||||||||||||||    
T  26449631 gttcacctgcttcttctgctttctctctgccttagt 26449666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 174
Target Start/End: Original strand, 40957730 - 40957885
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||||||||||| | || | ||||||||||||||||||||||| ||||| || |||||  |||| |||||||| ||||   |||| ||||||||||     
T  40957730 taggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtggatcccgtacaagcacactttctcttttctctcatcttctctctt 40957829  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||| |||||||| | ||||||   ||||| || |||||||||| ||||    
T  40957830 cctaatgcatggggtgtacaagggtgtatgaaaataatgggtgtctatgtatcatt 40957885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 19436264 - 19436114
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| |||||||||  || ||||||||||||||||||||||||| ||||| || ||||| || || |||||||| ||||   ||| ||||| |||||     
T  19436264 taggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtggatcccgcataagcacactttctcttttctcttctcttttctctt 19436165  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgta 169  Q
     |||||| ||| |||||||| | ||||||  ||||||| | ||||||||||    
T  19436164 cctaatgcatggggtgtacaagggtgtatgagaataaatggtgtctatgta 19436114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 3434585 - 3434665
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||| ||||| || ||||| ||||| |||||||| ||||    
T  3434585 taggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtggatcccgcacaagcacactttctctt 3434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 174
Target Start/End: Complemental strand, 32951563 - 32951415
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    ||||||| || |||||| |||||||||||||| |||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||  |||||     
T  32951563 caatacatcctttaacatccacacaaaaatctaacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaata 32951464  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||| |||||||| | ||||||  |||||| || |||||||||| ||||    
T  32951463 catggggtgtacaagggtgtatgagaataaggggtgtctatgtatcatt 32951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 36361990 - 36361910
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    |||||||||||||| || || ||||||||||||||||||||||||| ||||| || | ||||||||| |||||||| ||||    
T  36361990 taggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctctt 36361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 26 - 174
Target Start/End: Original strand, 38267070 - 38267218
Alignment:
Q  26 caatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatg 125  Q
    |||||||||| || ||||||||||||||||||||||||| ||||| || | ||| ||||| |||||||| ||||   |||||||||||||||  ||||||    
T  38267070 caatacaccctttgacacccacacaaaaatctgacacgtagtcacgtggaccccgcacaagcacactttctcttttctctcctcttctctcttcctaatg 38267169  T
Q  126 tatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     ||| | |||||    |||||| | |||||| ||| |||||||| ||||    
T  38267170 catgggatgtacgaaggtgtatggaaataaatgatatctatgtatcatt 38267218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 26296667 - 26296826
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||| ||||| |||| |||||| ||||| |||||||||| |||||| || ||| | ||| ||||| | || ||| ||||   |||||||||||||||     
T  26296667 taggtgacaatataccctttaacatccacataaaaatctgatacgtggccatatggaccccgcacaagcgcattttctcttttctctcctcttctctctt 26296766  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
      |||||||||||||||||| | |||||| | |||| | | |||||| ||||||||||||    
T  26296767 cttaatgtatgaggtgtacaagggtgtatggaaatatatggtgtctacgtaacattttcc 26296826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 178
Target Start/End: Original strand, 38044220 - 38044379
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| ||| |||||||||||||||||| || | || ||| | ||| |||||  ||||||| |||| | ||| ||||| |||||     
T  38044220 taggtggcaatacaccccttgacatccacacaaaaatctgacatgtagccatatggaccccgcacaagtacactttctctttcttcttctcttttctctt 38044319  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
     |||||  ||| |||||||| | ||||||   | |||| | |||||||||||||||||||    
T  38044320 cctaatacatggggtgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttcc 38044379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 41423713 - 41423864
Alignment:
Q  27 aatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgt 126  Q
    |||||||| ||| ||||  |||||||||||||||| |||||||| |  |||||  |||| || | ||| |||| |||||||||||||||||  ||| ||     
T  41423713 aatacacctcttgacacttacacaaaaatctgacatgtggtcacgtagatcccgtacaagcatattttctctttcatctcctcttctctcttcctagtgc 41423812  T
Q  127 atgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcc 178  Q
    ||| ||||||||   ||||||  ||||||||| ||| |||||||||||||||    
T  41423813 atggggtgtacaaaggtgtatgagaataaagggtgtttatgtaacattttcc 41423864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 46374879 - 46374808
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacaca 90  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||| |||||| | ||| ||||| ||||    
T  46374879 taggtggcaacacaccctttaacacccacacaaaaatctgacacgtggccacatggaccccgcacaagcaca 46374808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 39256000 - 39255903
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    |||||||||||||||| ||| | ||||| ||||||||||||||||||| ||| || |  ||||||||  ||||||| |||| |||||||||||||||||    
T  39256000 taggtggcaatacaccacttgatacccatacaaaaatctgacacgtgg-cacgtggactccacacaagaacactttctctttcatctcctcttctctct 39255903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 19 - 181
Target Start/End: Complemental strand, 40846190 - 40846028
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||||||||| ||| |||||||||||||| ||| || || | ||| | ||| |||||| ||||||| |||| | ||| |||||||||||     
T  40846190 taggtggcaatacaccccttgacatccacacaaaaatctaacatgtagttatatggaccccgcacaaatacactttctctttcttcttctcttctctctt 40846091  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
     ||||   ||||| |||||| | ||||||   | |||| | | ||||||||||||||||||||    
T  40846090 cctaaaagatgagatgtacaagggtgtatgcaattaaaaggtatctatgtaacattttccttt 40846028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 36362049 - 36362129
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    ||||||| |||||| || || ||||||||||||||||||||||||| ||||| || | ||||||||| |||||||| ||||    
T  36362049 taggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtggaccccacacaagcacactttctctt 36362129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 46374800 - 46374741
Alignment:
Q  120 ctaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttcct 179  Q
    |||||||||| |||||||| | |||||| |||||||| | ||||||||||||||||||||    
T  46374800 ctaatgtatggggtgtacaagggtgtatgggaataaatggtgtctatgtaacattttcct 46374741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 176
Target Start/End: Original strand, 7727929 - 7728086
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    ||||||| |||||||| ||| |||  |||| |||||||||||| ||||||| ||| | ||| |||||  ||||||| | || | ||| |||||||||||     
T  7727929 taggtggtaatacacctcttgacattcacataaaaatctgacatgtggtcatatggaccccgcacaagtacactttctgtttcttcttctcttctctctt 7728028  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatttt 176  Q
     ||||| |||| |||||||| |  |||||   | |||| | |||||||||||||||||    
T  7728029 cctaatatatggggtgtacaaggatgtatgcaattaaaaggtgtctatgtaacatttt 7728086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 198 - 313
Target Start/End: Complemental strand, 16099785 - 16099673
Alignment:
Q  198 tcaaaagtatgaccattcttggctaaataaagactaaaaagactactctctctaagaaaatttcaacaaaagtattggtattctc-agatttctgttgca 296  Q
    |||||||||||||| ||||| || ||| || |||||||| ||| |||||||  ||||| |||| ||||||| |||| |||||| | | |||| |||||||    
T  16099785 tcaaaagtatgacctttcttagcaaaacaacgactaaaa-gaccactctct--aagaatatttgaacaaaaatatttgtattccctatattt-tgttgca 16099690  T
Q  297 attgaaccaactattct 313  Q
    |||||||||||||||||    
T  16099689 attgaaccaactattct 16099673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 432
Target Start/End: Complemental strand, 33191332 - 33191268
Alignment:
Q  368 gctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||| |||| | ||||||||||| |||| |||||||||||| || ||||||| |||||    
T  33191332 gctgagttaaagctagcaggcttcactttgctcacatgtttcttcttcattttctctgctttagt 33191268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 38160513 - 38160556
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  38160513 gtggcaatacacccctta-cacccacacaaaattctgacacgtgg 38160556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 180
Target Start/End: Complemental strand, 27744363 - 27744225
Alignment:
Q  42 acccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggt 141  Q
    |||||||||||||||||||| |||| ||| || ||||| || || |||| ||| |||  | |||||||||||||||  ||| || ||| | |||||| |     
T  27744363 acccacacaaaaatctgacatgtggccacgtggatccctcataagcacattttctctatcctctcctcttctctcttcctagtgcatgggatgtacaagg 27744264  T
Q  142 gtgtataggaataaaggatgtctatgtaacattttcctt 180  Q
     | ||| |||||||| | ||| ||| |||||||||||||    
T  27744263 atatatgggaataaatggtgtttatataacattttcctt 27744225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 36208196 - 36208294
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctct 117  Q
    ||||||| ||||||  | || ||||||||||||||| |||||| |||||||| || | ||  ||||| |||| ||| |||| | |||||||||||||||    
T  36208196 taggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtggaccctgcacaagcacattttctctttcctctcctcttctctct 36208294  T

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Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 177
Target Start/End: Original strand, 32045881 - 32046018
Alignment:
Q  40 acacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacag 139  Q
    ||||||||| |||||||||||||||   || ||  | |||| || | || ||||| | || |||||| ||||||||||  | ||| |||||| ||||||     
T  32045881 acacccacataaaaatctgacacgtaaccatatagaccccatactagcatactttctttttcatctcatcttctctctttcaaatatatgagatgtacaa 32045980  T
Q  140 gtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
    | ||||||   ||||||| |||||||||||||||||||    
T  32045981 gggtgtatgtaaataaagaatgtctatgtaacattttc 32046018  T

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Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Original strand, 32029751 - 32029794
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  32029751 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 32029794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 43317609 - 43317566
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||||||| ||||||||||||| ||||||| ||||    
T  43317609 gtggcaatacacccctta-cacccacacaaaattctgacatgtgg 43317566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 152523 - 152679
Alignment:
Q  21 ggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcac 120  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||| ||| ||||| |||||| ||||||| |||| | ||| |||||||||||  |    
T  152523 ggtggcaatacaccccttgacacccacacaaaaatctgacatgtggtcatatggatcccgcacaaatacactttctctttcttcttctcttctctctttc 152622  T
Q  121 taatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttc 177  Q
    ||||  ||| | |||||| | ||||||   | |||| | ||||||||||||||||||    
T  152623 taatacatgggatgtacaagggtgtatgcaattaaaaggtgtctatgtaacattttc 152679  T

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Target: scaffold0237 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 4056 - 4207
Alignment:
Q  23 tggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcacta 122  Q
    ||||||||||||  |||||||||||||||||||||||||||| || || || ||||| || || |||||||| ||||   ||| |||||||||||  |||    
T  4056 tggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtggatcccgcataagcacactttctcttttctcttctcttctctcttccta 4155  T
Q  123 atgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
    ||| ||| |||||||| | |||||| |||||||| | |||||||||| ||||    
T  4156 atgcatggggtgtacaagggtgtatgggaataaatggtgtctatgtatcatt 4207  T

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Target: scaffold0531 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0531
Description:

Target: scaffold0531; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 357 - 432
Target Start/End: Complemental strand, 10324 - 10249
Alignment:
Q  357 tcctcattccggctgagttaaaactagaaagcttcactttgttcacctgtttcttcttctttctctctgccttagt 432  Q
    ||||||||||||||||||||||||||| | || ||||||||| ||| || |||||||||||| |||||||||||||    
T  10324 tcctcattccggctgagttaaaactagcaggcctcactttgtgcacgtgcttcttcttctttttctctgccttagt 10249  T

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Target: scaffold0110 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 180
Target Start/End: Complemental strand, 8913 - 8779
Alignment:
Q  46 acacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctcactaatgtatgaggtgtacaggtgtgt 145  Q
    |||||||||| |||||| | ||||| || | |||||||||  ||| ||| |||| | || | ||||||||||  ||||| |||| |||||||| | ||||    
T  8913 acacaaaaatttgacacatagtcacgtggaccccacacaagtacattttctctttcctcccatcttctctcttcctaatatatggggtgtacaagggtgt 8814  T
Q  146 ataggaataaaggatgtctatgtaacattttcctt 180  Q
    ||| ||||||| | |||||||||||||||||||||    
T  8813 ataagaataaaaggtgtctatgtaacattttcctt 8779  T

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Target: scaffold0321 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 10186 - 10031
Alignment:
Q  19 taggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttcttgcatctcctcttctctctc 118  Q
    |||||||||||||| || || ||| ||||| ||||||||||||||| ||||| || | | |  |||| |||||||| ||||   |||||||||||||||     
T  10186 taggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtggaccgcgtacaagcacactttctcttttctctcctcttctctctt 10087  T
Q  119 actaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacatt 174  Q
     |||||| ||  |||||||| | |||||| | ||||| || |||||||||| ||||    
T  10086 cctaatgcatagggtgtacaagggtgtatggaaataatgggtgtctatgtatcatt 10031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 99
Target Start/End: Original strand, 17075 - 17157
Alignment:
Q  17 cataggtggcaatacaccccttaacacccacacaaaaatctgacacgtggtcacatgaatcccacacaaacacactttttctt 99  Q
    ||||||| |||||||| ||||  ||| |||||||||||||||||| ||||||||||| | ||| ||||| |||| ||| ||||    
T  17075 cataggttgcaatacatccctcgacatccacacaaaaatctgacatgtggtcacatggaccccgcacaagcacattttctctt 17157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 17210 - 17288
Alignment:
Q  103 tctcctcttctctctcactaatgtatgaggtgtacaggtgtgtataggaataaaggatgtctatgtaacattttccttt 181  Q
    |||||||||||||||  |||   ||| |||||||||   |||||| | |||||||| ||||||||||||||||||||||    
T  17210 tctcctcttctctcttcctagaatataaggtgtacaaaggtgtatggaaataaagggtgtctatgtaacattttccttt 17288  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 22 - 66
Target Start/End: Complemental strand, 851 - 808
Alignment:
Q  22 gtggcaatacaccccttaacacccacacaaaaatctgacacgtgg 66  Q
    |||||||||||||| ||| ||||||||||||| ||||||||||||    
T  851 gtggcaatacacccttta-cacccacacaaaattctgacacgtgg 808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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