View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4238_high_7 (Length: 257)
Name: NF4238_high_7
Description: NF4238
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4238_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 48287935 - 48287688
Alignment:
| Q |
1 |
aagaatgagacttccaaagtcactatcattttctagagggattgagtgattgatcctttcaacaatcacattagatctaatactaaataataatttgata |
100 |
Q |
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| T |
48287935 |
aagaatgagacttccaaagtcactatcattttctagagggattgagtgattgatcctttcaacaatcacattagatctaatactaaataataatttgata |
48287836 |
T |
|
| Q |
101 |
ctgtacacaacctattgaattatgtacatcctaaattcccaatacacatttgggagaaccaaagcagcaagttgaactgctgaagatgagacccttttct |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48287835 |
ctgtacacaacctatcgaattatgtacatcctaaattcccaatacacatttgggagaaccaaagcagcaagttgaactgctgaagatgagacccttttct |
48287736 |
T |
|
| Q |
201 |
ttttccaagcaaataacatgtttcttcattttattcttccttcatctc |
248 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48287735 |
ttttccaagcaaataacatgtttcttcattttattcttccttcatctc |
48287688 |
T |
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