View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4239_high_12 (Length: 255)

Name: NF4239_high_12
Description: NF4239
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4239_high_12
NF4239_high_12
[»] chr2 (60 HSPs)
chr2 (1-239)||(7640273-7640509)
chr2 (61-239)||(25771464-25771642)
chr2 (61-239)||(27024056-27024234)
chr2 (62-239)||(27191254-27191429)
chr2 (62-239)||(27841068-27841243)
chr2 (61-239)||(5930442-5930620)
chr2 (61-239)||(25516513-25516689)
chr2 (69-239)||(43566902-43567070)
chr2 (61-239)||(6089912-6090087)
chr2 (89-239)||(16879882-16880032)
chr2 (89-239)||(16992015-16992165)
chr2 (61-239)||(36507950-36508126)
chr2 (82-239)||(38822115-38822269)
chr2 (61-235)||(44167632-44167804)
chr2 (61-239)||(3390451-3390620)
chr2 (61-235)||(3603004-3603178)
chr2 (70-196)||(43929316-43929442)
chr2 (61-249)||(25622951-25623140)
chr2 (61-239)||(40125408-40125586)
chr2 (61-239)||(19580919-19581098)
chr2 (61-249)||(37883672-37883860)
chr2 (72-235)||(41176892-41177051)
chr2 (61-212)||(41841969-41842118)
chr2 (72-239)||(19953600-19953767)
chr2 (81-239)||(7443483-7443641)
chr2 (61-249)||(9715451-9715640)
chr2 (61-239)||(26491322-26491498)
chr2 (61-239)||(29812532-29812710)
chr2 (153-239)||(43929217-43929303)
chr2 (145-239)||(44951522-44951616)
chr2 (81-249)||(15673875-15674036)
chr2 (61-239)||(29734208-29734387)
chr2 (61-156)||(42105752-42105847)
chr2 (73-164)||(3464990-3465079)
chr2 (69-205)||(13268601-13268735)
chr2 (61-201)||(25237281-25237421)
chr2 (62-213)||(11930934-11931085)
chr2 (98-249)||(4878643-4878794)
chr2 (61-148)||(10589057-10589145)
chr2 (72-239)||(44441416-44441579)
chr2 (174-239)||(3465061-3465126)
chr2 (146-239)||(16720765-16720858)
chr2 (57-205)||(5071321-5071469)
chr2 (146-237)||(10589199-10589290)
chr2 (130-249)||(28228310-28228429)
chr2 (141-239)||(24500586-24500684)
chr2 (70-205)||(2251296-2251431)
chr2 (72-203)||(31269048-31269179)
chr2 (82-134)||(34479996-34480048)
chr2 (79-195)||(35353680-35353796)
chr2 (180-239)||(11550513-11550572)
chr2 (93-156)||(12183328-12183391)
chr2 (67-121)||(32909073-32909128)
chr2 (69-119)||(11550588-11550638)
chr2 (62-115)||(24500538-24500592)
chr2 (78-122)||(22651996-22652040)
chr2 (192-239)||(20036532-20036579)
chr2 (72-202)||(31262908-31263038)
chr2 (144-213)||(17068858-17068927)
chr2 (153-213)||(17118756-17118816)
[»] chr8 (57 HSPs)
chr8 (1-239)||(8054724-8054961)
chr8 (61-249)||(9270040-9270228)
chr8 (70-239)||(41996573-41996740)
chr8 (70-239)||(32104755-32104924)
chr8 (61-239)||(44295335-44295513)
chr8 (61-239)||(31874103-31874281)
chr8 (61-239)||(16996806-16996981)
chr8 (64-236)||(36545701-36545873)
chr8 (61-235)||(9992684-9992860)
chr8 (121-239)||(5457150-5457268)
chr8 (61-239)||(32412810-32412987)
chr8 (71-239)||(5989659-5989827)
chr8 (71-250)||(3680952-3681131)
chr8 (71-239)||(37129592-37129756)
chr8 (61-239)||(16937256-16937434)
chr8 (61-239)||(32256638-32256816)
chr8 (61-239)||(37658985-37659163)
chr8 (129-239)||(14115745-14115855)
chr8 (62-244)||(7281039-7281221)
chr8 (81-235)||(10042811-10042965)
chr8 (61-239)||(26937544-26937722)
chr8 (61-212)||(16808897-16809046)
chr8 (61-239)||(5917659-5917835)
chr8 (62-244)||(7269376-7269558)
chr8 (74-212)||(13864391-13864529)
chr8 (61-239)||(15665558-15665736)
chr8 (89-249)||(12244123-12244283)
chr8 (72-239)||(13977431-13977605)
chr8 (137-239)||(12248631-12248733)
chr8 (62-236)||(16938191-16938365)
chr8 (61-226)||(2628933-2629096)
chr8 (87-238)||(3925608-3925758)
chr8 (74-201)||(23766772-23766898)
chr8 (62-204)||(15237590-15237731)
chr8 (76-163)||(31147794-31147881)
chr8 (69-239)||(5327993-5328149)
chr8 (98-249)||(31712983-31713134)
chr8 (129-243)||(17019205-17019319)
chr8 (129-243)||(17549642-17549756)
chr8 (61-210)||(6833498-6833648)
chr8 (74-212)||(284422-284557)
chr8 (74-212)||(631320-631455)
chr8 (74-212)||(817132-817267)
chr8 (62-201)||(32920672-32920811)
chr8 (72-205)||(18190795-18190928)
chr8 (75-195)||(11655871-11655991)
chr8 (78-205)||(14327515-14327642)
chr8 (74-202)||(15827042-15827170)
chr8 (62-205)||(1215290-1215433)
chr8 (62-205)||(32061814-32061957)
chr8 (81-151)||(7954516-7954583)
chr8 (62-205)||(14530859-14531002)
chr8 (69-122)||(12356846-12356899)
chr8 (130-239)||(26582806-26582914)
chr8 (95-164)||(37719905-37719973)
chr8 (145-201)||(27534367-27534423)
chr8 (62-122)||(27534433-27534493)
[»] chr6 (32 HSPs)
chr6 (2-239)||(19759750-19759985)
chr6 (68-239)||(23843341-23843512)
chr6 (61-239)||(20845027-20845205)
chr6 (57-235)||(13234029-13234206)
chr6 (71-239)||(11425973-11426138)
chr6 (62-239)||(12576398-12576572)
chr6 (61-239)||(32457665-32457842)
chr6 (62-239)||(16913348-16913523)
chr6 (69-239)||(31747985-31748154)
chr6 (61-249)||(548773-548960)
chr6 (81-239)||(7049285-7049442)
chr6 (72-239)||(8633113-8633273)
chr6 (81-239)||(8644284-8644442)
chr6 (61-195)||(15128114-15128244)
chr6 (61-249)||(1944115-1944303)
chr6 (61-239)||(10744598-10744780)
chr6 (61-239)||(32804313-32804492)
chr6 (61-250)||(4663726-4663915)
chr6 (71-239)||(33194634-33194802)
chr6 (69-239)||(891615-891785)
chr6 (131-213)||(5417141-5417223)
chr6 (72-237)||(5544737-5544902)
chr6 (95-168)||(31804301-31804374)
chr6 (61-148)||(20745052-20745139)
chr6 (62-205)||(33541480-33541623)
chr6 (71-233)||(12652120-12652286)
chr6 (81-148)||(903496-903563)
chr6 (61-208)||(22530299-22530446)
chr6 (174-248)||(15128037-15128111)
chr6 (174-239)||(31804352-31804417)
chr6 (160-212)||(904386-904438)
chr6 (181-239)||(20496332-20496390)
[»] chr4 (69 HSPs)
chr4 (62-239)||(23067765-23067942)
chr4 (62-239)||(46716811-46716988)
chr4 (1-239)||(42971999-42972235)
chr4 (61-239)||(9661872-9662050)
chr4 (61-239)||(4634302-4634480)
chr4 (61-239)||(14542429-14542607)
chr4 (72-239)||(9474456-9474623)
chr4 (61-239)||(41486594-41486772)
chr4 (72-239)||(31601273-31601443)
chr4 (57-239)||(51646108-51646291)
chr4 (64-239)||(32189004-32189177)
chr4 (61-239)||(37869334-37869512)
chr4 (72-235)||(12519686-12519849)
chr4 (69-239)||(46728837-46729007)
chr4 (61-239)||(15729898-15730077)
chr4 (62-239)||(38434618-38434796)
chr4 (72-239)||(28990328-28990495)
chr4 (61-239)||(34115573-34115747)
chr4 (61-239)||(43156796-43156973)
chr4 (71-239)||(20961480-20961645)
chr4 (4-161)||(52555716-52555871)
chr4 (61-239)||(44375181-44375359)
chr4 (77-239)||(2945172-2945334)
chr4 (61-239)||(16991891-16992069)
chr4 (112-224)||(50003108-50003220)
chr4 (81-199)||(40859685-40859803)
chr4 (100-239)||(30470040-30470175)
chr4 (72-239)||(7242686-7242853)
chr4 (61-164)||(54420705-54420807)
chr4 (70-164)||(53903638-53903731)
chr4 (61-239)||(29589278-29589456)
chr4 (82-244)||(38170072-38170233)
chr4 (61-239)||(46775774-46775951)
chr4 (61-234)||(4959495-4959670)
chr4 (72-171)||(9549497-9549596)
chr4 (61-199)||(30416578-30416717)
chr4 (77-244)||(4622621-4622790)
chr4 (61-213)||(6408459-6408614)
chr4 (77-226)||(6789806-6789949)
chr4 (74-178)||(1657544-1657648)
chr4 (89-213)||(44021514-44021638)
chr4 (81-235)||(1124981-1125134)
chr4 (69-210)||(36804503-36804644)
chr4 (174-239)||(54420658-54420723)
chr4 (78-210)||(26625172-26625303)
chr4 (61-178)||(28588580-28588698)
chr4 (74-147)||(9526348-9526421)
chr4 (158-239)||(14346547-14346628)
chr4 (182-239)||(52555657-52555714)
chr4 (112-235)||(3169501-3169619)
chr4 (62-205)||(5388535-5388678)
chr4 (173-239)||(29474245-29474311)
chr4 (173-239)||(40859805-40859871)
chr4 (174-239)||(53903713-53903778)
chr4 (61-117)||(1645980-1646036)
chr4 (180-244)||(29577034-29577098)
chr4 (112-235)||(1645476-1645594)
chr4 (81-140)||(29474370-29474429)
chr4 (62-162)||(23926061-23926161)
chr4 (71-244)||(46386686-46386858)
chr4 (61-117)||(3169059-3169115)
chr4 (62-122)||(3673643-3673703)
chr4 (90-201)||(29257274-29257384)
chr4 (72-205)||(33020876-33021009)
chr4 (146-239)||(30416510-30416603)
chr4 (61-121)||(11817091-11817151)
chr4 (74-234)||(35338426-35338586)
chr4 (4-48)||(46717009-46717053)
chr4 (196-231)||(9549594-9549629)
[»] chr1 (58 HSPs)
chr1 (20-239)||(44562666-44562883)
chr1 (1-239)||(21326434-21326670)
chr1 (61-239)||(23320459-23320637)
chr1 (62-239)||(5832253-5832431)
chr1 (61-239)||(22344829-22345007)
chr1 (62-232)||(630708-630879)
chr1 (61-239)||(4564537-4564713)
chr1 (62-239)||(23257108-23257285)
chr1 (61-239)||(15276363-15276545)
chr1 (72-239)||(15698230-15698395)
chr1 (61-239)||(38646603-38646781)
chr1 (82-239)||(38644714-38644871)
chr1 (61-213)||(10877365-10877517)
chr1 (70-212)||(1767994-1768135)
chr1 (61-243)||(8893312-8893494)
chr1 (81-239)||(36621391-36621549)
chr1 (71-239)||(12147965-12148133)
chr1 (131-239)||(12967649-12967757)
chr1 (73-239)||(28213082-28213245)
chr1 (72-230)||(49651865-49652032)
chr1 (62-212)||(40488341-40488491)
chr1 (67-222)||(27469642-27469797)
chr1 (61-201)||(52752047-52752182)
chr1 (83-239)||(52839571-52839727)
chr1 (61-164)||(40992353-40992458)
chr1 (82-239)||(33703427-33703583)
chr1 (72-243)||(29067080-29067250)
chr1 (73-212)||(32539134-32539273)
chr1 (71-171)||(45659071-45659171)
chr1 (69-164)||(14717234-14717330)
chr1 (61-168)||(6212874-6212981)
chr1 (61-239)||(33177515-33177691)
chr1 (84-236)||(26199635-26199774)
chr1 (61-156)||(35077890-35077985)
chr1 (61-235)||(22032012-22032184)
chr1 (174-239)||(14717187-14717252)
chr1 (62-161)||(900142-900241)
chr1 (81-239)||(44513919-44514064)
chr1 (174-239)||(45659146-45659211)
chr1 (90-205)||(34566736-34566851)
chr1 (61-213)||(37700327-37700484)
chr1 (174-235)||(6212835-6212896)
chr1 (61-118)||(17579787-17579844)
chr1 (65-205)||(2350645-2350785)
chr1 (61-213)||(37685033-37685191)
chr1 (181-233)||(40992447-40992499)
chr1 (137-239)||(11121071-11121173)
chr1 (158-239)||(10264825-10264906)
chr1 (174-239)||(46589279-46589344)
chr1 (61-164)||(13691750-13691853)
chr1 (69-123)||(46589202-46589255)
chr1 (166-243)||(47392262-47392338)
chr1 (62-190)||(34659596-34659723)
chr1 (160-244)||(48654953-48655037)
chr1 (75-122)||(48655100-48655147)
chr1 (81-123)||(30853815-30853857)
chr1 (94-190)||(13969609-13969705)
chr1 (90-161)||(27356756-27356827)
[»] chr7 (52 HSPs)
chr7 (57-249)||(26017565-26017757)
chr7 (5-239)||(30992740-30992972)
chr7 (61-239)||(47749753-47749931)
chr7 (61-239)||(40775286-40775464)
chr7 (1-239)||(43807067-43807303)
chr7 (57-239)||(7985907-7986089)
chr7 (61-239)||(24475362-24475538)
chr7 (57-239)||(49166942-49167122)
chr7 (61-236)||(25855140-25855315)
chr7 (61-239)||(24470414-24470590)
chr7 (64-249)||(8611531-8611714)
chr7 (61-237)||(42490721-42490898)
chr7 (72-239)||(135062-135229)
chr7 (69-249)||(13008580-13008760)
chr7 (74-239)||(40476741-40476904)
chr7 (71-239)||(23732310-23732478)
chr7 (61-239)||(8319333-8319512)
chr7 (61-239)||(28015375-28015554)
chr7 (71-239)||(11001875-11002040)
chr7 (59-212)||(43483611-43483770)
chr7 (60-226)||(9933865-9934028)
chr7 (57-213)||(44681477-44681631)
chr7 (69-239)||(46918429-46918596)
chr7 (61-201)||(47156415-47156550)
chr7 (61-239)||(5024973-5025151)
chr7 (60-239)||(22751457-22751635)
chr7 (61-164)||(39090134-39090238)
chr7 (61-239)||(10250400-10250576)
chr7 (57-164)||(37399641-37399748)
chr7 (61-235)||(23177504-23177676)
chr7 (61-213)||(15123923-15124076)
chr7 (81-226)||(38649287-38649432)
chr7 (60-235)||(14707600-14707776)
chr7 (71-171)||(35661553-35661653)
chr7 (96-239)||(772497-772640)
chr7 (93-222)||(35141685-35141814)
chr7 (72-156)||(19895651-19895735)
chr7 (62-199)||(29804632-29804770)
chr7 (181-249)||(39090227-39090295)
chr7 (62-205)||(21552406-21552549)
chr7 (69-191)||(33530433-33530555)
chr7 (62-205)||(14734000-14734144)
chr7 (193-249)||(19895591-19895647)
chr7 (61-199)||(16263406-16263544)
chr7 (62-205)||(21329247-21329390)
chr7 (72-147)||(35135192-35135267)
chr7 (174-228)||(37399730-37399784)
chr7 (81-164)||(41748491-41748574)
chr7 (93-207)||(32312618-32312732)
chr7 (95-164)||(1685007-1685075)
chr7 (173-239)||(24045197-24045263)
chr7 (180-238)||(41748445-41748503)
[»] chr5 (48 HSPs)
chr5 (61-239)||(4726845-4727023)
chr5 (62-239)||(5378322-5378499)
chr5 (61-239)||(6887095-6887273)
chr5 (61-239)||(31645848-31646026)
chr5 (61-239)||(28618623-28618799)
chr5 (61-239)||(4070573-4070748)
chr5 (61-235)||(29310275-29310444)
chr5 (72-235)||(32390568-32390731)
chr5 (61-234)||(15710561-15710734)
chr5 (61-239)||(2415419-2415597)
chr5 (61-239)||(33486486-33486665)
chr5 (61-239)||(9034859-9035043)
chr5 (72-239)||(41063313-41063480)
chr5 (61-239)||(41554505-41554684)
chr5 (101-235)||(10924055-10924188)
chr5 (61-239)||(19645958-19646136)
chr5 (69-239)||(41358066-41358236)
chr5 (61-239)||(22397465-22397643)
chr5 (61-239)||(18472643-18472820)
chr5 (61-239)||(8812069-8812247)
chr5 (59-244)||(34866444-34866629)
chr5 (61-239)||(6647830-6648008)
chr5 (61-168)||(28500736-28500843)
chr5 (80-249)||(13007723-13007898)
chr5 (81-239)||(34843955-34844113)
chr5 (130-239)||(20270802-20270911)
chr5 (61-199)||(37425012-37425153)
chr5 (77-249)||(13079173-13079351)
chr5 (61-225)||(34873880-34874044)
chr5 (174-239)||(35906401-35906466)
chr5 (69-205)||(6074687-6074823)
chr5 (89-185)||(28423774-28423870)
chr5 (61-164)||(34893908-34894011)
chr5 (96-239)||(40774812-40774958)
chr5 (80-249)||(13080184-13080361)
chr5 (81-239)||(14910593-14910739)
chr5 (180-235)||(34893865-34893920)
chr5 (89-164)||(35906344-35906419)
chr5 (62-205)||(40565106-40565249)
chr5 (69-116)||(41988211-41988258)
chr5 (61-123)||(29154274-29154335)
chr5 (153-239)||(37425135-37425221)
chr5 (62-122)||(17326211-17326271)
chr5 (69-122)||(12524655-12524709)
chr5 (131-200)||(14211170-14211238)
chr5 (177-205)||(8957341-8957369)
chr5 (180-244)||(28500827-28500891)
chr5 (141-213)||(41988251-41988323)
[»] scaffold0722 (1 HSPs)
scaffold0722 (69-249)||(5433-5613)
[»] chr3 (51 HSPs)
chr3 (61-244)||(29182520-29182703)
chr3 (61-239)||(1165313-1165491)
chr3 (61-239)||(43029702-43029880)
chr3 (61-239)||(3088581-3088757)
chr3 (69-239)||(41882327-41882495)
chr3 (61-239)||(14741242-14741420)
chr3 (71-249)||(28995216-28995391)
chr3 (61-239)||(20200975-20201153)
chr3 (61-239)||(20203157-20203335)
chr3 (57-235)||(22286672-22286848)
chr3 (69-239)||(43839434-43839605)
chr3 (61-235)||(21803549-21803725)
chr3 (60-239)||(47914510-47914688)
chr3 (61-239)||(50519809-50519980)
chr3 (67-236)||(33977845-33978012)
chr3 (61-236)||(35501679-35501854)
chr3 (61-239)||(45664248-45664418)
chr3 (106-239)||(54240150-54240283)
chr3 (61-233)||(29776613-29776783)
chr3 (80-239)||(32237913-32238071)
chr3 (57-213)||(25374013-25374169)
chr3 (61-239)||(40797051-40797230)
chr3 (61-239)||(22844070-22844249)
chr3 (61-244)||(39340218-39340401)
chr3 (81-239)||(913233-913391)
chr3 (61-239)||(40461912-40462090)
chr3 (61-236)||(20251671-20251851)
chr3 (65-249)||(32089837-32090021)
chr3 (61-226)||(22893645-22893809)
chr3 (93-239)||(21585950-21586096)
chr3 (144-239)||(7656432-7656527)
chr3 (72-239)||(36540591-36540755)
chr3 (61-239)||(53426823-53426995)
chr3 (61-233)||(2598102-2598270)
chr3 (61-164)||(33076331-33076434)
chr3 (69-235)||(34767006-34767179)
chr3 (57-199)||(42106126-42106269)
chr3 (94-239)||(25939396-25939541)
chr3 (180-239)||(11846687-11846745)
chr3 (106-201)||(40365290-40365385)
chr3 (77-239)||(50460227-50460387)
chr3 (71-148)||(26412361-26412438)
chr3 (61-239)||(4019620-4019795)
chr3 (61-116)||(1220255-1220310)
chr3 (57-177)||(27831126-27831247)
chr3 (63-164)||(37051645-37051746)
chr3 (62-205)||(1806411-1806554)
chr3 (62-121)||(33070174-33070233)
chr3 (61-244)||(43242830-43243010)
chr3 (141-213)||(1220190-1220262)
chr3 (186-239)||(33076428-33076482)
[»] scaffold0316 (1 HSPs)
scaffold0316 (61-239)||(12120-12298)
[»] scaffold0012 (1 HSPs)
scaffold0012 (62-239)||(244656-244833)
[»] scaffold0024 (1 HSPs)
scaffold0024 (57-239)||(36544-36721)
[»] scaffold0157 (1 HSPs)
scaffold0157 (72-235)||(1062-1225)
[»] scaffold0011 (1 HSPs)
scaffold0011 (60-239)||(11037-11211)
[»] scaffold0665 (1 HSPs)
scaffold0665 (129-239)||(1044-1154)
[»] scaffold0018 (1 HSPs)
scaffold0018 (81-212)||(137002-137133)
[»] scaffold0045 (1 HSPs)
scaffold0045 (61-225)||(9589-9743)
[»] scaffold1294 (1 HSPs)
scaffold1294 (61-211)||(799-949)
[»] scaffold0340 (1 HSPs)
scaffold0340 (72-205)||(11729-11861)
[»] scaffold0150 (1 HSPs)
scaffold0150 (113-213)||(10254-10354)
[»] scaffold0627 (1 HSPs)
scaffold0627 (130-239)||(6704-6811)
[»] scaffold0009 (1 HSPs)
scaffold0009 (62-122)||(105072-105132)


Alignment Details
Target: chr2 (Bit Score: 174; Significance: 1e-93; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 7640509 - 7640273
Alignment:
Q  1 agccgtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttat 100  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||        ||| ||||||| ||||||||||||||||||||||||||||||||    
T  7640509 agccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttg--acccaaaatcacccctctaactcgtttttctatttcccttttat 7640412  T
Q  101 tgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||    
T  7640411 tgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttg 7640312  T
Q  201 tctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7640311 tctttcttgtttctctcaggtatttgatcggttcagatt 7640273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 25771464 - 25771642
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  25771464 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 25771563  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  25771564 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 25771642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 27024234 - 27024056
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  27024234 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 27024135  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  27024134 cgacattggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcaattcagatt 27024056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 62 - 239
Target Start/End: Complemental strand, 27191429 - 27191254
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||| |    
T  27191429 aaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtac 27191331  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  27191330 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 27191254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 62 - 239
Target Start/End: Complemental strand, 27841243 - 27841068
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||| |    
T  27841243 aaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtac 27841145  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  27841144 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 27841068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 5930442 - 5930620
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||    
T  5930442 aaaatcatccctctaactcgtttttctgtttcccttttatttcaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtg 5930541  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||  |||||| |||||| || ||||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||    
T  5930542 cgatgttggtttgttcgtcgtttttgtgcgacgttgtttgtttttcttgtttctatcatgtatttgatcggttcagatt 5930620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 25516513 - 25516689
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| || ||||||||    
T  25516513 aaaatcacccctctaactcatttttctatttcccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcttcgtcttcgtg 25516611  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||    
T  25516612 cgacgttggtt-gttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 25516689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 43566902 - 43567070
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| |||||||||||| |||    
T  43566902 ccctctaactcgtttttctatttcctttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 43567000  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  43567001 gtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagatt 43567070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 6089912 - 6090087
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || ||  |||||||||||||||||||| ||||||||    
T  6089912 aaaatcacccctctaattcgtttttctatttcccttttattgaaataagtgattttcacatctatttcg--ttttattttgtgatttcgtcgtcttcgtg 6090009  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||  |||||| |||| |  ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  6090010 cgatgttggtt-gttcatcttctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcgcttcagatt 6090087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 16880032 - 16879882
Alignment:
Q  89 tttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtg 188  Q
    ||||||||||||||||||||||||||||||||| | ||  ||||||||| |||||||||| || |||||||||||| |||||| |||||| |||||||||    
T  16880032 tttcccttttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtg 16879933  T
Q  189 cgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16879932 cgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 16879882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 89 - 239
Target Start/End: Complemental strand, 16992165 - 16992015
Alignment:
Q  89 tttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtg 188  Q
    ||||||||||||||||||||||||||||||||| | ||  ||||||||| |||||||||| || |||||||||||| |||||| |||||| |||||||||    
T  16992165 tttcccttttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgcgacgttggtttgttcgtcgtctttgtg 16992066  T
Q  189 cgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16992065 cgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 16992015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 36507950 - 36508126
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| | |||| |||| ||||||||||| |||||||||||||||||| |||| ||||||| ||  ||||||||||||||||||||||| ||||||||    
T  36507950 aaaatcacctctctgactcatttttctattttccttttattgaaataagtaattt-cacatctattttgttttttattttgtgatttcgtcgtcttcgtg 36508048  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  36508049 cgacgttggtt-gttcgttgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagatt 36508126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 82 - 239
Target Start/End: Original strand, 38822115 - 38822269
Alignment:
Q  82 ttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgt 181  Q
    ||||||||||||||||| |||||||||||||||||||||||| || ||||||  |||||||||||||||| |||||||||||| |||||| |||||| ||    
T  38822115 ttttctatttcccttttgttgaaataagtgattttcacatctatttcgtttt--attttgtgatttcgtcgtcttcgtgcgacgttggtt-gttcgtcgt 38822211  T
Q  182 ctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  38822212 ctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 38822269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 44167804 - 44167632
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||||||| ||||| |||||||||||| |||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  44167804 aaaatcacccctctaactcgtttttctattttcctttaattgaaataagtaattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtg 44167706  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||    
T  44167705 cgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttcgctcagctatttgatcgcttca 44167632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 3390451 - 3390620
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  3390451 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 3390550  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| ||||||||||||||||||         ||||||||||||||||||||||| |||||||||    
T  3390551 cgacgttggtttgttcgtcgtctttgtgcgacgttgt---------ttgtttctctcaggtatttgatcagttcagatt 3390620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 3603004 - 3603178
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||| ||| |||||| ||||||||||||||||||| |||| || ||||||||||||||||||||| || ||||||||    
T  3603004 aaaatcacccctctaacttgtttttctcttttccttttcttgaaataagtgattttcatatctatttcgttttttattttgtgatttcatcgtcttcgtg 3603103  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||| |||||| |||||| |||||||||||||||||||||| |   ||||||||||||| ||||||||| |||||    
T  3603104 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttggtttgtttctctcagatatttgatccgttca 3603178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 70 - 196
Target Start/End: Complemental strand, 43929442 - 43929316
Alignment:
Q  70 cctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattgg 169  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  43929442 cctctaactcgtttttgtatttcccttttattgaaataagtcattttcacatatgttacgttttttattttgtgatttcgtcgtcttcgtgcgacattgg 43929343  T
Q  170 ttagttcgttgtctttgtgcgacgttg 196  Q
    || |||||| ||||| |||||||||||    
T  43929342 tttgttcgtcgtcttcgtgcgacgttg 43929316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 25623140 - 25622951
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||| ||| ||||||||||| |||| |||    
T  25623140 aaaatcacccatataactcgtttttctctttcccttttattgaaataagtgattttcacatctattttgttttttctttcgtgatttcgtcgtcttagtg 25623041  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtcttt-cttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    |||||||| || |||||| ||||||||||| |||||||||||||| |||||||  |||||||||||  |||||||||||| |||| ||||    
T  25623040 cgacattgttttgttcgtcgtctttgtgcggcgttgtttgtctttccttgttttactcaggtattttttcggttcagattgtcatatcag 25622951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 40125408 - 40125586
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| ||  ||||||||||||||||||| |||||||| |||    
T  40125408 aaaatcacccctctaacttgtttttctatttctcttttattgaaatacgtgattttcacatctattttgttttttattttgtgattttgtcatcttagtg 40125507  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | || ||| || |||  | |||||||||||||||| |||||||||||||||||  ||||||||||  ||| ||||||||    
T  40125508 caacgttgttttgtttttcgtctttgtgcgacgttctttgtctttcttgtttcgttcaggtatttattcgattcagatt 40125586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 19581098 - 19580919
Alignment:
Q  61 aaaatcatccctctaactcgtttttct-atttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||| || | |||||| ||| ||||||| ||| |||| ||    
T  19581098 aaaatcacccctctaactcgttttttttatttcccttttattgaaataagtgattttcatatctatttcattttttctttcgtgattttgtcgtcttagt 19580999  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||| || |||||| |||||||||||||||||||||| ||| ||||||   ||||||||||| ||| ||||||||    
T  19580998 gcgacattgttttgttcgtcgtctttgtgcgacgttgtttgttttttttgttttgttcaggtatttgttcgattcagatt 19580919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 249
Target Start/End: Original strand, 37883672 - 37883860
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||| |||||||||||||||| ||||||| |||||||||||||| |||||| || |||||||| ||| ||| ||||||  |||| |||    
T  37883672 aaaatcacccctctaattcgtttttctatttcctttttattaaaataagtgattttaacatctatttcgttttttctttcgtggtttcgttgtcttagtg 37883771  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    |||| ||| || |||||| |||||||||||| |||||||||||||||||||||  | | ||||||| ||| |||||||| |||| ||||    
T  37883772 cgacgttgttttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgttgacgtatttgttcgattcagattgtcatatcag 37883860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 41176892 - 41177051
Alignment:
Q  72 tctaactcgttttt-ctatttcccttttattgaaataagtgat--tttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||||||||| ||||||| ||||||||||||||||||||  |||||||||| || |||||||||||||||||||||      |||||||||| |||    
T  41176892 tctaactcgttttttctatttctcttttattgaaataagtgatgatttcacatctatttcgttttttattttgtgatttc------ttcgtgcgacgttg 41176985  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    ||| |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||    
T  41176986 gtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttca 41177051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 41841969 - 41842118
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| || ||||| |  ||||||||||||||| |||| |||    
T  41841969 aaaatcacccctttaactcgtttttctctttcccttttattgaaataagcgattttcacatctatttcgtttct--ttttgtgatttcgtcgtcttagtg 41842066  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    |||| |||||| |||||| ||||||||||  |||||||||||||||||||||    
T  41842067 cgacgttggtttgttcgtcgtctttgtgctgcgttgtttgtctttcttgttt 41842118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 72 - 239
Target Start/End: Original strand, 19953600 - 19953767
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||| || |||||||| |||| || |||| |||  |    
T  19953600 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttctttcgtaatttcgtcgtcttagtacgacgttgtgt 19953699  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||| || ||||||||||| |||||||||||||||||||||   ||| ||||||| ||||||||||||    
T  19953700 tgtttgtcgtctttgtgcggcgttgtttgtctttcttgttttgttcaagtatttgttcggttcagatt 19953767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 7443641 - 7443483
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||||||| |||||||||||||||||| |||||||||||| || |||||||  ||| ||||||||| | |||| ||||||| ||| || |||||| |    
T  7443641 tttttctattttccttttattgaaataagtaattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttcgtcg 7443542  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||||||||||||||||||||||   || |||||||| ||||||||||||    
T  7443541 tctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagatt 7443483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 9715640 - 9715451
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||||| ||| ||||||||||| || ||| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||    
T  9715640 aaaatcatctctccaactcgttttttcttttttccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttagt 9715541  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
     | || ||| || ||| ||  |||||||||| | ||||||||||||||||||||  ||||||||||| | |||||| ||| |||| ||||    
T  9715540 acaacgttgatttgtttgtcatctttgtgcggcattgtttgtctttcttgtttcgttcaggtatttgtttggttcaaattgtcatatcag 9715451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 26491322 - 26491498
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||| |||||| |||||||||||||||||||||||||||||||| |||||||||| || | |||||| ||| ||||||||||| |||| |||    
T  26491322 aaaatcacccctttaactcatttttctatttcccttttattgaaataagtga-tttcacatctatttcattttttctttcgtgatttcgtcgtcttagtg 26491420  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||| || |||  | ||||||||| |||||||||||| |||||||||||  ||| ||||||| ||| ||||||||    
T  26491421 cgacgttgttttgtttttcgtctttgtgtgacgttgtttgtgtttcttgtttcgttca-gtatttgttcgattcagatt 26491498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 29812710 - 29812532
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacg-ttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| ||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||| || || |||||| ||| ||||||||||| |||| ||    
T  29812710 aaaatcacccctctaactcatttttctctttaccttttattgaaataagtgatttccacatctatttcgtttttttctttcgtgatttcgtcgtcttagt 29812611  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||  || || |||||| |||||||||||  ||||||| |||||||||||||  |||||||| || ||||||| ||||    
T  29812610 gcgac-gtgttttgttcgtcgtctttgtgcggtgttgtttttctttcttgtttcattcaggtatgtgttcggttcggatt 29812532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 239
Target Start/End: Complemental strand, 43929303 - 43929217
Alignment:
Q  153 tcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  43929303 tcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctatcaggtatttgatcggttcagatt 43929217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 145 - 239
Target Start/End: Original strand, 44951522 - 44951616
Alignment:
Q  145 tttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||| |||||||||||| |||||| |||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44951522 tttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtacgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 44951616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 81 - 249
Target Start/End: Complemental strand, 15674036 - 15673875
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||||||||||||||||||||||||||||||| | ||||| || ||||| || |||||||||||| || |||| ||||||| |        |||| |    
T  15674036 tttttctatttcccttttattgaaataagtgatttacccatctatttcgtttctttttttgtgatttcatcgtcttagtgcgacct-------gtcgtcg 15673944  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    |||||||||||||||||||||||||||||||||  |||||| |||| ||| |||||||| |||| ||||    
T  15673943 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtttttgttcgattcagattgtcatatcag 15673875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 29734208 - 29734387
Alignment:
Q  61 aaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||| || || || ||||| ||| ||||||| ||| |||| ||    
T  29734208 aaaatcactcctctaactcgttttttctatttcccttttattgaaataagtgattttcacacctatttcgctttttctttcgtgattttgtcgtcttagt 29734307  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||| ||| || ||| || ||| |||| |||||||||||||| |||| |||||  ||| | ||||| ||| ||||||||    
T  29734308 gtgacgttgttttgtttgtcgtcgttgtacgacgttgtttgtccttctggtttcgttcaaggatttgttcgattcagatt 29734387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 42105847 - 42105752
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||| ||||||||||||||| ||||    
T  42105847 aaaatcaccactctaactcgtttttctatttcccttttattgaaataagtgactttcacatctattttgttttttcttttgtgatttcgtcgtctt 42105752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 164
Target Start/End: Original strand, 3464990 - 3465079
Alignment:
Q  73 ctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||||| || |||||||||||||||||||||||| |||| |||||||    
T  3464990 ctaactcgtttttctattttccttttattgaaataagtga--ttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgcgac 3465079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 205
Target Start/End: Original strand, 13268601 - 13268735
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||||||||||| || || ||||||| |||||||||||||||||||||||| || |||||||  ||| ||| ||| ||| |||| ||||||| |||    
T  13268601 ccctctaactcgtttt-ctcttgcccttttgttgaaataagtgattttcacatctatttcgtttttc-tttcgtggttttgtcgtcttagtgcgacgttg 13268698  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
     || |||||| ||||||||||||||||||||||||||    
T  13268699 ttttgttcgtcgtctttgtgcgacgttgtttgtcttt 13268735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 201
Target Start/End: Complemental strand, 25237421 - 25237281
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| | ||| |||| |||||||  |||||||||| ||||||||||| |||||||||||| || |||||||| |||  |||||||||| |||| |||    
T  25237421 aaaatcacctctcgaacttgtttttccctttcccttttgttgaaataagttattttcacatctatttcgttttttctttcatgatttcgtcgtcttagtg 25237322  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgt 201  Q
    |||| ||| || |||||| ||||||||||||| ||||||||    
T  25237321 cgacgttgttttgttcgtcgtctttgtgcgacattgtttgt 25237281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 11930934 - 11931085
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||||  ||||||||||||||||| |||||||| ||||||||||| || ||||||||  | || | ||||||||||||||||||| || |||| |||     
T  11930934 aaatcatgtctctaactcgtttttctttttcccttgtattgaaataaatgtttttcacaagtatttcattttttattttgtgatttcatcgtcttagtgt 11931033  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    ||| |||||| |||||||||||| ||  |  ||||||||||||| |||||||    
T  11931034 gacgttggtttgttcgttgtcttcgtaaggagttgtttgtcttttttgtttc 11931085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 249
Target Start/End: Complemental strand, 4878794 - 4878643
Alignment:
Q  98 tattgaaataagtgatttt-cacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttg 196  Q
    |||| |||||||||||||| ||||||| ||   |||||| ||| ||||||| ||| |||| ||||||  ||| || |||||| |||||||||||||||||    
T  4878794 tattaaaataagtgatttttcacatctattttattttttctttcgtgattt-gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttg 4878696  T
Q  197 tttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    ||||||||||||| |||  | ||||||||| |||||||||||| |||| ||||    
T  4878695 tttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcag 4878643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 148
Target Start/End: Original strand, 10589057 - 10589145
Alignment:
Q  61 aaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttc 148  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| || |||||||  ||| ||||||||    
T  10589057 aaaatcacccctctaacttgttttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttgctttcgtgatttc 10589145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 239
Target Start/End: Original strand, 44441416 - 44441579
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||| | |||| ||||||| |||||||||||||||||||||| |    |||||| |||| | |||| |||||||| ||||||| || |||    
T  44441416 tctaactcgtttttatctttctcttttatcgaaataagtgattttcacatctat----tttttttttttttaattttgtcatcttagtgcgacgtttgtt 44441511  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||||| ||||| || || |||||||||||||  |||||||  |||| |||||| ||| || |||||    
T  44441512 tgttcgtcgtcttcgtacggcgttgtttgtcttatttgtttcgttcagatatttgttcgatttagatt 44441579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 3465061 - 3465126
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||    
T  3465061 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcgcttcagatt 3465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 16720858 - 16720765
Alignment:
Q  146 ttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| |||| ||||||| || ||| |||||| ||||||||| |||||||||||| ||||||||| || ||||||||||| ||||||||||||    
T  16720858 ttcgtcgtctttgtgcgacgttagtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgttactttcaggtatttgttcggttcagatt 16720765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 57 - 205
Target Start/End: Complemental strand, 5071469 - 5071321
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    |||| |||||| || ||||| ||||||||||  ||| |||||||| |||||||||||||||||||    |  | ||||  ||||||||||||||||||||    
T  5071469 accttaaatcacccttctaaatcgtttttcttcttctcttttatttaaataagtgattttcacattaaattaggttttccttttgtgatttcgtcatctt 5071370  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
     |||| || ||| || ||| || ||||||||||||| ||||||||||||    
T  5071369 agtgcaacgttgttttgtttgtcgtctttgtgcgactttgtttgtcttt 5071321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 10589199 - 10589290
Alignment:
Q  146 ttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcaga 237  Q
    |||||| |||| ||||||| ||| || |||||| |||||||||||||||||||||||||||||||||   || |||||||| ||||||||||    
T  10589199 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcaga 10589290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 249
Target Start/End: Original strand, 28228310 - 28228429
Alignment:
Q  130 ttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatc 229  Q
    ||||||||||| |||||||||  || | ||||||  |||||| ||||||| ||||||||||   ||||||||||||||||||||  ||| ||||||| ||    
T  28228310 ttttttattttatgatttcgttgtcatagtgcgatgttggtttgttcgttatctttgtgcggttttgtttgtctttcttgtttcgttcaagtatttgttc 28228409  T
Q  230 ggttcagattttcatttcag 249  Q
    |||||||||| |||| ||||    
T  28228410 ggttcagattgtcatatcag 28228429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 239
Target Start/End: Original strand, 24500586 - 24500684
Alignment:
Q  141 gtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||| ||| |||| ||||||| ||  || |||||| |||||||||||||||||||||||||||||||||   ||| ||||||| ||||||||||||    
T  24500586 gtgatttggtcgtcttagtgcgaccttattttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcatgtatttgttcggttcagatt 24500684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 205
Target Start/End: Complemental strand, 2251431 - 2251296
Alignment:
Q  70 cctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattgg 169  Q
    ||||||| ||||||||||  ||||||| |||| ||||||||||||||||||||   |  | |  |  ||||||||||||||| |||| |||||||  ||     
T  2251431 cctctaaatcgtttttctccttcccttctatttaaataagtgattttcacatcgaattaggtcatccttttgtgatttcgtcgtcttagtgcgacgctgt 2251332  T
Q  170 ttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    || ||| || ||||||||||||||||||||||||||    
T  2251331 tttgtttgtcgtctttgtgcgacgttgtttgtcttt 2251296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 203
Target Start/End: Complemental strand, 31269179 - 31269048
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataa-gtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||| ||||||||||  |||||||||||| |||||| | |||||||| | || ||  ||||| | ||| ||||||||||| |||| ||||||||||| |    
T  31269179 tctaaatcgtttttctcattcccttttatttaaataaagcgattttcaaa-ctattttgttttctttttcgtgatttcgtcgtcttagtgcgacattgtt 31269081  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtct 203  Q
    | ||||||  ||||||||||| |||||||||||    
T  31269080 ttgttcgtcttctttgtgcgatgttgtttgtct 31269048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 134
Target Start/End: Original strand, 34479996 - 34480048
Alignment:
Q  82 ttttctatttcccttttattgaaataagtgattttcacatctgttacgttttt 134  Q
    |||||| ||||||||||||||||||||||||||||||||||| || |||||||    
T  34479996 ttttctctttcccttttattgaaataagtgattttcacatctatttcgttttt 34480048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 195
Target Start/End: Original strand, 35353680 - 35353796
Alignment:
Q  79 cgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgt 178  Q
    |||||||||  |||||||||||| |||||||||||||| |||||   |  | ||||| ||| ||||||||||| |||| ||||||| ||| || ||| ||    
T  35353680 cgtttttctccttcccttttatttaaataagtgatttttacatcgaattaggtttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtttgt 35353779  T
Q  179 tgtctttgtgcgacgtt 195  Q
     ||||||||||||||||    
T  35353780 cgtctttgtgcgacgtt 35353796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 11550572 - 11550513
Alignment:
Q  180 gtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||| |||| |||||||||||||||||  ||| ||||||| ||||||||||||    
T  11550572 gtctttgtgcggcgttttttgtctttcttgtttcgttcaagtatttgttcggttcagatt 11550513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 12183391 - 12183328
Alignment:
Q  93 ccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||| ||||||||||||||||||||| |   ||||||| ||| ||||||||||||||||    
T  12183391 ccttttatttaaataagtgattttcacatctatatagttttttctttagtgatttcgtcatctt 12183328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 32909073 - 32909128
Alignment:
Q  67 atccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacat 121  Q
    ||||||||||||||||||| | | |||||||||||||||||||||||| |||||||    
T  32909073 atccctctaactcgttttttcgaattcccttttattgaaataagtgatgttcacat 32909128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 119
Target Start/End: Complemental strand, 11550638 - 11550588
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcac 119  Q
    ||||||||||| ||||||| ||| | |||||||||||||||||||||||||    
T  11550638 ccctctaactcatttttctttttacattttattgaaataagtgattttcac 11550588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 24500538 - 24500592
Alignment:
Q  62 aaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattt 115  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  24500538 aaatcacccctctaacttgttttttctatttccattttattgaaataagtgattt 24500592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 122
Target Start/End: Complemental strand, 22652040 - 22651996
Alignment:
Q  78 tcgtttttctatttcccttttattgaaataagtgattttcacatc 122  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||    
T  22652040 tcgtttttctttttcccttttatttaaataagtgatttttacatc 22651996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 20036532 - 20036579
Alignment:
Q  192 cgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||||||||||||  ||||||||||| || |||||||||    
T  20036532 cgttgtttgtctttcttgtttcgttcaggtatttgttcagttcagatt 20036579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 202
Target Start/End: Complemental strand, 31263038 - 31262908
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaat-aagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||| ||||||||||  |||||||||||| |||| ||| |||||||||| || ||  ||||| | ||| ||||||||| | |||| |||||| |||| |    
T  31263038 tctaaatcgtttttctccttcccttttatttaaattaagagattttcaca-ctatttagttttctttttcgtgatttcgccgtcttagtgcgagattgtt 31262940  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtc 202  Q
    | ||| || |||||||||||  ||||||||||    
T  31262939 ttgtttgtcgtctttgtgcgttgttgtttgtc 31262908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 17068927 - 17068858
Alignment:
Q  144 atttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    |||| ||| |||| ||||||| ||| || |||||| |||||||||||  ||||||||||||| |||||||    
T  17068927 attttgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttc 17068858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 17118816 - 17118756
Alignment:
Q  153 tcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    |||| ||||||| ||| || |||||| |||||||||||  ||||||||||||| |||||||    
T  17118816 tcttagtgcgacgttgttttgttcgtcgtctttgtgcggtgttgtttgtcttttttgtttc 17118756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 8054961 - 8054724
Alignment:
Q  1 agccgtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttat 100  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||        ||| ||||| |||||||||||||||||||||||||||||| |||    
T  8054961 agccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttg--acccaaaattatccctctaactcgtttttctatttcccttatat 8054864  T
Q  101 tgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgttt 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  8054863 tgaaataagtgattttcacatctgttacgtttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgttt 8054764  T
Q  200 gtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8054763 gtctttcttgtttctctcaggtatttgatcggttcagatt 8054724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 61 - 249
Target Start/End: Original strand, 9270040 - 9270228
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  9270040 aaaatcacccctctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgttgtcttcgtg 9270139  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  9270140 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcag 9270228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 70 - 239
Target Start/End: Original strand, 41996573 - 41996740
Alignment:
Q  70 cctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattgg 169  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||    
T  41996573 cctctaactcgtttttgtatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcatcgtcttcgtgcgacgttgg 41996672  T
Q  170 ttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || |||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||    
T  41996673 tttgttcgtcgtctttgtgcgacgt--tttgtctttcttgattctctcaggtatttgatcggttcagatt 41996740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 70 - 239
Target Start/End: Complemental strand, 32104924 - 32104755
Alignment:
Q  70 cctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattgg 169  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  32104924 cctctaattcgtttttctatttcttttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtacgacgttgg 32104825  T
Q  170 ttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || ||| ||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32104824 tttgtttgtcatctttgtgcaacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 32104755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 44295335 - 44295513
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||| |||||||| |||||||  ||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  44295335 aaaatcatctctctaacttgtttttccttttcctttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 44295434  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  44295435 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 44295513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 31874103 - 31874281
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||| |||| |||    
T  31874103 aaaatcacccctctaactcgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgattttgtcgtctttgtg 31874202  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | || |||||| |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  31874203 caacgttggtttgttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 31874281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 16996981 - 16996806
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  16996981 aaaatcacccctctaactcgtttt-ctattttccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtg 16996884  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  16996883 cgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagatt 16996806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 64 - 236
Target Start/End: Complemental strand, 36545873 - 36545701
Alignment:
Q  64 atcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcga 163  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||| |||| ||||||    
T  36545873 atcacccctctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgattttgtcgtctttgtgcga 36545774  T
Q  164 cattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    | |||||| ||| || |||||||||||||||| | ||| |||||  ||||||||||||||||||||| |||||    
T  36545773 cgttggtttgttagtcgtctttgtgcgacgttctatgtttttctattttctctcaggtatttgatcgattcag 36545701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 9992684 - 9992860
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattt--tgtgatttcgtcatcttcg 158  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | |||| ||| |  |||||||||||| ||||||    
T  9992684 aaaatcacccctctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcattttgtatctcttgtgatttcgtcgtcttcg 9992783  T
Q  159 tgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||||| |||||| |||||| ||||||||| ||| |||||||| |||||||||||||| || |||||||||||||||    
T  9992784 tgcgacgttggtttgttcgtcgtctttgtgtgacattgtttgtttttcttgtttctcttagatatttgatcggttca 9992860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 5457150 - 5457268
Alignment:
Q  121 tctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcagg 220  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |    
T  5457150 tctgttacgttttttattttgtgatttcgtcgtcttcgtgcgacgttggttagttcgtcgtcttcgtgcgacgttgtttgtctttcttgtttctctcaag 5457249  T
Q  221 tatttgatcggttcagatt 239  Q
    |||||||||||||||||||    
T  5457250 tatttgatcggttcagatt 5457268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 32412810 - 32412987
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||| ||||||||| |  ||||||||||||||||||||||||||||||||| | ||  ||||||||| ||||||||||||| ||||||||    
T  32412810 aaaatcacccctctcactcgttttccc-tttcccttttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcgtcgtcttcgtg 32412908  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||| | |||||||||||| ||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  32412909 cgacgttggtttgttcatcgtctttgtgcgatgttgtttgtttttcttgtttctttcaggtatttgattggttcagatt 32412987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 5989659 - 5989827
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||||| || |||||||||||||||||||| ||| | || ||||||| |||||    
T  5989659 ctctaactcgtttttctctttccctttttatgaaataagtgattttcacatctatttcgttttttattttgtgattttgtcgttttagtgcgacgttggt 5989758  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
      |||||| ||||||||||| ||||||||||||||||| |||| |||| ||||||  ||||||||||||    
T  5989759 atgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgctcaagtatttcttcggttcagatt 5989827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 71 - 250
Target Start/End: Original strand, 3680952 - 3681131
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||||||| |||||||| ||| |||||||||||||||| |||||||||||||| || |||||||||||||||||||| ||| | || ||||||||||| |    
T  3680952 ctctaacttgtttttctcttttccttttattgaaataaatgattttcacatctatttcgttttttattttgtgattttgtcgttttagtgcgacattgat 3681051  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcagt 250  Q
    |  ||||| |||||  |||||||||||||||||||||||||||| || |||||||| |||||| ||||| |||| |||||    
T  3681052 ttattcgtcgtcttcatgcgacgttgtttgtctttcttgtttctttctggtatttgttcggtttagattgtcatatcagt 3681131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 37129756 - 37129592
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||| ||| ||||||||||||  |||||||||||||||||||||||||||||| || ||||||  |||||||||||||||| |||| ||||||| |||||    
T  37129756 ctcttacttgtttttctatttttcttttattgaaataagtgattttcacatctatttcgtttt--attttgtgatttcgtcgtctt-gtgcgacgttggt 37129660  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||    
T  37129659 t-gttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgaacgcttcagatt 37129592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 16937434 - 16937256
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||||||| ||||||| || ||||| || ||||||||||||||| |||| |||    
T  16937434 aaaatcatccctctaacttgtttttctatttcccttttacttaaataagtgatttacacatctatttcgtttctttttttgtgatttcgtcgtcttagtg 16937335  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||| || |||| | ||||||||||||| ||||||| ||||| ||||||  ||||||||||| |  |||||||||    
T  16937334 cgaccttgttttgttcatcgtctttgtgcgacattgtttgcctttcgtgtttcgttcaggtatttgtttagttcagatt 16937256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 32256816 - 32256638
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||  ||| ||||||||| | |||| |||    
T  32256816 aaaatcacccctctaacttgtttttttatttcccttttattgaaataagtgattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtg 32256717  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||  ||| || ||| || |||||||||||||||||||||||||||||||||   || |||||||| |||||| |||||    
T  32256716 cgatgttgttttgtttgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggtttagatt 32256638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 37658985 - 37659163
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||| | |||||| ||||||||||||||||||||||||||||| ||| ||| || ||||| || ||||||||||||||  |||| |||    
T  37658985 aaaatcacccctctaatttgtttttatatttcccttttattgaaataagtgatttacacgtctatttcgtttctttttttgtgatttcgttgtcttagtg 37659084  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||| || |||||| |||||||| |||||||||||| ||||||||||||  ||| ||||||| ||||||||||||    
T  37659085 cgaccttgttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaagtatttgttcggttcagatt 37659163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 14115855 - 14115745
Alignment:
Q  129 gttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgat 228  Q
    |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||    
T  14115855 gttttttattttgtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgat 14115756  T
Q  229 cggttcagatt 239  Q
    |||||||||||    
T  14115755 cggttcagatt 14115745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 244
Target Start/End: Complemental strand, 7281221 - 7281039
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| || ||||||||| |||| ||||| | ||| ||||||||||||||||||||||||| ||  ||||||||||||||||||||| | || | ||||    
T  7281221 aaatcacccatctaactcgcttttttattttcttttaattgaaataagtgattttcacatctattttgttttttattttgtgatttcgccgtcatagtgc 7281122  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    |||||||||| |||||| |||||||||| || |||||||||||  |||||||   |||||||||| |||||| ||||| ||||    
T  7281121 gacattggtttgttcgtcgtctttgtgcaacattgtttgtcttatttgtttcatgcaggtatttgttcggtttagattgtcat 7281039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 10042811 - 10042965
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    |||||||| |||||||||||||||||||||||||||||| ||| || |||||||| |||  |||||||||| |||| |||| || ||| || ||||||||    
T  10042811 tttttctaattcccttttattgaaataagtgattttcacttctatttcgttttttctttcatgatttcgtcgtcttagtgcaacgttgttttgttcgttg 10042910  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||| |||||||||| |||||||||||||||||  ||||||||||| || |||||    
T  10042911 tcttagtgcgacgttatttgtctttcttgtttcgttcaggtatttgttcagttca 10042965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 26937544 - 26937722
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||||||||| || |||||||||||||||||||||| ||| |||||||| ||  |||| ||   || |||||| ||| |||| |||    
T  26937544 aaaatcacccctctaactcgttttcctttttcccttttattgaaataagtaattctcacatctatttagtttctttgattatgattttgtcgtcttagtg 26937643  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || | |||||| |||||| | ||||||||| ||||||||||||||||||||||  ||||||||||  ||||||||||||    
T  26937644 cgtcgttggtttgttcgtcgactttgtgcggcgttgtttgtctttcttgtttcgttcaggtatttattcggttcagatt 26937722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 16808897 - 16809046
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || |||||||| ||||||| ||||| |||||||||||||||||||| |||||||| || |||||||||||||||||||| ||| |||  |||    
T  16808897 aaaatcacccatctaactcatttttctctttcc-ttttattgaaataagtgattatcacatctatttcgttttttattttgtgattt-gtcgtctaagtg 16808994  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
     ||| |||| | |||||| ||||||||||| |||||||||||||||||||||    
T  16808995 ggacgttgggttgttcgtggtctttgtgcggcgttgtttgtctttcttgttt 16809046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 5917835 - 5917659
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||| |||||||| || ||||||||| ||| |||||  |||||||||||||| || |||||||| ||| ||||||||||| |||| |||    
T  5917835 aaaatcacccctctagctcgtttt-ctctttccctttaattaaaatat-tgattttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtg 5917738  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||  | |||||| ||||||||||||||||||||||||||| | |||   ||||||||||| ||||||||||||    
T  5917737 cgacgttgtgttgttcgtcgtctttgtgcgacgttgtttgtctttcctattttgttcaggtatttgttcggttcagatt 5917659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 244
Target Start/End: Complemental strand, 7269558 - 7269376
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| || ||||||||| |||| | ||||| ||| |||| |||||||||||||||||||| ||  ||||||||||||||||||| ||| || | ||||    
T  7269558 aaatcacccttctaactcgcttttttctttccttttaattgtaataagtgattttcacatctattttgttttttattttgtgattttgtcgtcatagtgc 7269459  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    ||| |||||| ||| || |||||||||| || ||||||||||||||||||||   || ||||||| |||||| ||||| ||||    
T  7269458 gacgttggtttgttagtcgtctttgtgcaacattgtttgtctttcttgtttcatgcaagtatttgttcggtttagattgtcat 7269376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 13864391 - 13864529
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||  || ||||||  |||  ||| ||||||| ||| || |    
T  13864391 taactcgtttttttatttcccttttattgaaataagtgattttcacatctatttcgttttttcgttcgtgattctgtcgccttagtgcgacgttgttttg 13864490  T
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    ||| || ||||| |||| |||||||||||||||||||||    
T  13864491 ttctttatctttctgcggcgttgtttgtctttcttgttt 13864529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 15665558 - 15665736
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||| |||| ||||||||||||||||| |||||||||||| || |||||||| |||  |||||||||| |||| |||    
T  15665558 aaaatcacccctctaacttgtttttctctttcacttttattgaaataagtaattttcacatctatttcgttttttctttcatgatttcgtcgtcttagtg 15665657  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||  |||  | ||| || ||||||||||  |||||||||||| || |||||   ||||||||||| ||||||||||||    
T  15665658 agatgttgtgttgtttgtcgtctttgtgcagcgttgtttgtctatcctgttttgttcaggtatttgttcggttcagatt 15665736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 89 - 249
Target Start/End: Complemental strand, 12244283 - 12244123
Alignment:
Q  89 tttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtg 188  Q
    |||||||||| |||| |||||||||||||| || | || |||||||| ||| |||||||||||||||| ||||||| ||| || ||||||   |||||||    
T  12244283 tttcccttttgttgatataagtgattttcaaatttatttcgttttttctttcgtgatttcgtcatcttagtgcgacgttgttttgttcgtcaactttgtg 12244184  T
Q  189 cgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    || ||||||||||| || |||||||  ||||||||||| ||| |||||||| |||| ||||    
T  12244183 cggcgttgtttgtcgtttttgtttcgttcaggtatttgttcgattcagattgtcatatcag 12244123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 239
Target Start/End: Original strand, 13977431 - 13977605
Alignment:
Q  72 tctaactcgtttttctatttccctttta-ttgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||| ||||||||||||| |||||||  ||| | |||||||||||||||||| || |||||||| |||  |||||||||||| || ||||||||||| |    
T  13977431 tctaattcgtttttctattcccctttttgttggactaagtgattttcacatctatttcgttttttctttcttgatttcgtcattttagtgcgacattgtt 13977530  T
Q  171 tagttcgttgtcttt------gtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | |||||| ||||||      ||  ||||||||||||||||||||||||  |||||||||||| |||||||||||    
T  13977531 ttgttcgtcgtctttgtatgagtatgacgttgtttgtctttcttgtttcgttcaggtatttgaccggttcagatt 13977605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 239
Target Start/End: Complemental strand, 12248733 - 12248631
Alignment:
Q  137 ttttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    ||||||||||||||| |||| ||||||| ||| || |||||| ||||||||||||||||||||||||||||||||||  ||||||||||| ||| |||||    
T  12248733 ttttgtgatttcgtcgtcttagtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcag 12248634  T
Q  237 att 239  Q
    |||    
T  12248633 att 12248631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 236
Target Start/End: Complemental strand, 16938365 - 16938191
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    ||||||| ||| ||||| |||||||| |||||||||| |||||||||||||||||||||||| ||  ||||||| |||  |||||||||| |||| ||||    
T  16938365 aaatcattcctttaacttgtttttctctttcccttttgttgaaataagtgattttcacatctattttgttttttctttcatgatttcgtcgtcttagtgc 16938266  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    ||| ||| |  |||||| || |||||||  |||||||||||||| || |||   || |||||||| |||||||||    
T  16938265 gactttgttgtgttcgtcgtatttgtgctgcgttgtttgtcttttttatttagttcgggtatttgttcggttcag 16938191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 2628933 - 2629096
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||  |  | ||||| ||| ||||||||||| | || |||    
T  2628933 aaaatcacccatctaactcgtttt-ctatttcccttttattgaaataagtgattttcacatctactttg-tttttctttcgtgatttcgtcgttttagtg 2629030  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 226  Q
    |||| ||  || || |||  |||||||||||| ||||||||||||||||||||  ||||| |||||    
T  2629031 cgacgttattttgtccgtcatctttgtgcgacattgtttgtctttcttgtttcgttcaggcatttg 2629096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 87 - 238
Target Start/End: Complemental strand, 3925758 - 3925608
Alignment:
Q  87 tatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttg 186  Q
    ||||||||||||| | |||||||| |||| ||||||| || ||||| || ||||||||||||||| |||| |||| || ||| ||  ||||| |||||||    
T  3925758 tatttcccttttactaaaataagttatttacacatctatttcgtttctt-ttttgtgatttcgtcgtcttagtgcaaccttgtttttttcgtcgtctttg 3925660  T
Q  187 tgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagat 238  Q
    |||||| ||||||| ||||||||||||  ||||||||||| ||| |||||||    
T  3925659 tgcgaccttgtttgcctttcttgtttcattcaggtatttgttcgattcagat 3925608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 201
Target Start/End: Original strand, 23766772 - 23766898
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||| | || || ||||| ||| ||||||||||||||||  ||||| |||  || |    
T  23766772 taactcgtttttctattttcattttattaaaataagtgattttcacatttatttcg-tttttctttcgtgatttcgtcatcttaatgcgaaattattttg 23766870  T
Q  174 ttcgttgtctttgtgcgacgttgtttgt 201  Q
    ||||| ||||||||||||||||||||||    
T  23766871 ttcgtcgtctttgtgcgacgttgtttgt 23766898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 204
Target Start/End: Complemental strand, 15237731 - 15237590
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| || |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| |  |||||||||||| ||||| || |||| || |    
T  15237731 aaatcacccatctaactcgtttttctctttcccttttattgaagtaagtgattttcacatatgtt-ctgtttttattttgttatttcttcgtcttagtac 15237633  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctt 204  Q
    ||  ||||||  ||||| |||||||||||  ||||||||||||    
T  15237632 gatgttggtttcttcgtcgtctttgtgcggtgttgtttgtctt 15237590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 76 - 163
Target Start/End: Complemental strand, 31147881 - 31147794
Alignment:
Q  76 actcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcga 163  Q
    ||||||||||||  |||||||||||||| ||||||||||||||||||| || || ||||||||||||||||||||| |||| ||||||    
T  31147881 actcgtttttctcgttcccttttattgacataagtgattttcacatctatttcgctttttattttgtgatttcgtcgtcttagtgcga 31147794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 5327993 - 5328149
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaa-taagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacatt 167  Q
    ||||||||||| ||||||| ||||||| ||||||||| |||||||||||||||||| ||  |||||||||||||||||||| |  | ||||| |||| ||    
T  5327993 ccctctaactcatttttctctttccctattattgaaaataagtgattttcacatctattttgttttttattttgtgatttctttgttttcgtccgacgtt 5328092  T
Q  168 ggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||             ||||||||||||||||||| |||||||  ||||||| ||||||||||||||||||||    
T  5328093 gg-------------tttgtgcgacgttgtttgtttttcttg--tctctcaagtatttgatcggttcagatt 5328149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 249
Target Start/End: Complemental strand, 31713134 - 31712983
Alignment:
Q  98 tattgaaataagtgatttt-cacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttg 196  Q
    |||| |||||||||||||| ||||||| ||   |||||| ||| ||||||| ||| |||| ||||||  ||| || |||||| |||||||||||||||||    
T  31713134 tattaaaataagtgatttttcacatctattttattttttctttcgtgattt-gtcgtctttgtgcgatgttgttttgttcgtcgtctttgtgcgacgttg 31713036  T
Q  197 tttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    ||||||||||||| |||  | ||||||||| |||||||||||| |||| ||||    
T  31713035 tttgtctttcttgcttcgtttaggtatttgttcggttcagattgtcatatcag 31712983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 17019205 - 17019319
Alignment:
Q  129 gttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc-tctcaggtatttga 227  Q
    ||||||||||||||||||| ||| |||| ||||||| |||||| |||||| ||||||||||   ||||||||||||||||||||| ||| | |||||||     
T  17019205 gttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatct-aagtatttgt 17019303  T
Q  228 tcggttcagattttca 243  Q
    |||| |||||||||||    
T  17019304 tcggatcagattttca 17019319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 17549642 - 17549756
Alignment:
Q  129 gttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc-tctcaggtatttga 227  Q
    ||||||||||||||||||| ||| |||| ||||||| |||||| |||||| ||||||||||   ||||||||||||||||||||| ||| | |||||||     
T  17549642 gttttttattttgtgatttggtcgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgtttcatct-aagtatttgt 17549740  T
Q  228 tcggttcagattttca 243  Q
    |||| |||||||||||    
T  17549741 tcggatcagattttca 17549756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 210
Target Start/End: Original strand, 6833498 - 6833648
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||||| |||||| || |||   ||||| | |||||||||||||| |||||| ||  ||||||||||||||||||| ||  |||| ||    
T  6833498 aaaatcacccctctaactggttttttctctttttattttaataaaataagtgatttttacatctattttgttttttattttgtgattttgttgtcttagt 6833597  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgt 210  Q
    ||||  ||||||   |||| ||||||||||||| |||||||||||||||||    
T  6833598 gcgatgttggtttactcgtcgtctttgtgcgacattgtttgtctttcttgt 6833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 212
Target Start/End: Complemental strand, 284557 - 284422
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    ||||||||||||||  ||  ||||| |||||||| ||||||||||||||| || |||||||||   || ||||||||| |||| || | || || ||| |    
T  284557 taactcgtttttctcattttcttttgttgaaatatgtgattttcacatctatttcgtttttta---tgagatttcgtcgtcttagtacaacgttagtttg 284461  T
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    || ||||||| |||||| |||||||||||||||||||||    
T  284460 tttgttgtctgtgtgcggcgttgtttgtctttcttgttt 284422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 631320 - 631455
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    ||||||||||||||  ||  ||||| |||||||| ||||||||||||||| || |||||||||   || ||||||||| |||| || | || || ||| |    
T  631320 taactcgtttttctcattttcttttgttgaaatatgtgattttcacatctatttcgtttttta---tgagatttcgtcgtcttagtacaacgttagtttg 631416  T
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    || ||||||| |||||| |||||||||||||||||||||    
T  631417 tttgttgtctgtgtgcggcgttgtttgtctttcttgttt 631455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 212
Target Start/End: Original strand, 817132 - 817267
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    ||||||||||||||  ||  ||||| |||||||| ||||||||||||||| || |||||||||   || ||||||||| |||| || | || || ||| |    
T  817132 taactcgtttttctcattttcttttgttgaaatatgtgattttcacatctatttcgtttttta---tgagatttcgtcgtcttagtacaacgttagtttg 817228  T
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    || ||||||| |||||| |||||||||||||||||||||    
T  817229 tttgttgtctgtgtgcggcgttgtttgtctttcttgttt 817267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 201
Target Start/End: Original strand, 32920672 - 32920811
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| | |||||| ||||||||||  |||| ||||||| ||||||||||||||||||||   |  | ||||| ||||||||||||||| |||| ||||    
T  32920672 aaatcaccgctctaaatcgtttttctccttcctttttatttaaataagtgattttcacatcgaattaggtttttcttttgtgatttcgtcgtcttagtgc 32920771  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgt 201  Q
     ||| || || ||| || ||||||||||||| ||||||||    
T  32920772 aacaatgttttgtttgtcgtctttgtgcgaccttgtttgt 32920811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 18190928 - 18190795
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctg-ttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||| |||||||| |  ||||||| |||| ||||||||||||||||||||   ||| |||||   ||||||||||||||| |||| |||||||  || |    
T  18190928 tctaaatcgtttttatccttcccttctatttaaataagtgattttcacatcgaattaagttttcc-ttttgtgatttcgtcgtcttagtgcgaccctgtt 18190830  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    | ||| |||||||||||||||||||||||||||||    
T  18190829 ttgtttgttgtctttgtgcgacgttgtttgtcttt 18190795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 195
Target Start/End: Complemental strand, 11655991 - 11655871
Alignment:
Q  75 aactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagt 174  Q
    |||||||||||||  |||| |||||| |||||||||||||||| ||||| || | |||||| |||||||||||  ||||||| ||||||| ||| || ||    
T  11655991 aactcgtttttctcgttcctttttatcgaaataagtgattttctcatctatttcattttttcttttgtgattttatcatcttagtgcgacgttgttttgt 11655892  T
Q  175 tcgttgtctttgtgcgacgtt 195  Q
    || | ||| |||| |||||||    
T  11655891 tcatcgtccttgtacgacgtt 11655871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 78 - 205
Target Start/End: Original strand, 14327515 - 14327642
Alignment:
Q  78 tcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcg 177  Q
    ||||||||||  |||| ||||||| |||||||||||||| |||||   |  | ||||  ||||||||||| ||| |||| ||||||| ||| || ||| |    
T  14327515 tcgtttttcttcttccattttatttaaataagtgattttaacatcgaattaggttttccttttgtgatttagtcgtcttagtgcgacgttgttttgtttg 14327614  T
Q  178 ttgtctttgtgcgacgttgtttgtcttt 205  Q
    | ||||||||||||||||||||||||||    
T  14327615 tcgtctttgtgcgacgttgtttgtcttt 14327642  T

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Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 202
Target Start/End: Original strand, 15827042 - 15827170
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    ||||||||||||   |||| ||||| |||||||||||  |||||| |||| ||  | ||||| ||| ||||||||||| |||| ||||||| ||| || |    
T  15827042 taactcgttttttcctttcacttttgttgaaataagtagttttcatatctattttgatttttctttcgtgatttcgtcgtcttagtgcgacgttgttttg 15827141  T
Q  174 ttcgttgtctttgtgcgacgttgtttgtc 202  Q
    ||||||||  ||||||| |||||||||||    
T  15827142 ttcgttgtacttgtgcgtcgttgtttgtc 15827170  T

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Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 1215433 - 1215290
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| | |||||| || |||||||  ||| |||||||| ||||||||||||||||||||   |  | ||||  ||||||||||||||| |||| |||     
T  1215433 aaatcaccgctctaaatcatttttctccttctcttttatttaaataagtgattttcacatcgaattaggttttccttttgtgatttcgtcgtcttagtgt 1215334  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    ||| ||| || ||| ||  ||||||||||||||||||| |||||    
T  1215333 gacgttgttttgtttgtcatctttgtgcgacgttgtttatcttt 1215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 32061814 - 32061957
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| || ||||| |||||| |||  ||||| |||||| |||||||||||||||| ||    |  | ||||  ||||||||||||||| |||| ||||    
T  32061814 aaatcacccttctaaatcgtttctctccttcccctttatttaaataagtgattttcatattgaattaggttttccttttgtgatttcgtcgtcttagtgc 32061913  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    |||  || || ||| || ||||||||||||| ||||||||||||    
T  32061914 gacgctgttttgtttgtcgtctttgtgcgacattgtttgtcttt 32061957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 151
Target Start/End: Original strand, 7954516 - 7954583
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtc 151  Q
    |||||||  |||||||||||| ||||||||||||||||||||| ||| ||||||   ||||||||||||||    
T  7954516 tttttctccttcccttttatttaaataagtgattttcacatctatta-gttttt--ctttgtgatttcgtc 7954583  T

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Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 14531002 - 14530859
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| || ||||| ||||||||||  ||| ||| |||| ||||||||||||||||||||   |  | ||||  |||||||| ||| || |||| ||||    
T  14531002 aaatcacccttctaaatcgtttttctccttctcttctatttaaataagtgattttcacatcgaattaggttttccttttgtgaattcatcgtcttagtgc 14530903  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
     ||  || || ||| || |||||||||| |||||||||||||||    
T  14530902 aaccatgttttgtttgtcgtctttgtgcaacgttgtttgtcttt 14530859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 12356846 - 12356899
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatc 122  Q
    |||||||| ||||||||||  |||||||||||| ||| || |||||||||||||    
T  12356846 ccctctaaatcgtttttctccttcccttttatttaaacaaatgattttcacatc 12356899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 26582914 - 26582806
Alignment:
Q  130 ttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatc 229  Q
    |||||||||||||||||||||  |||| ||||||  ||||||  ||||| | ||||||||   ||||||||| |||||||||||  || | |||||| ||    
T  26582914 ttttttattttgtgatttcgttgtcttagtgcgatgttggtttattcgtcgactttgtgcattgttgtttgt-tttcttgtttcgttcggatatttgttc 26582816  T
Q  230 ggttcagatt 239  Q
    | ||||||||    
T  26582815 gattcagatt 26582806  T

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Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 37719905 - 37719973
Alignment:
Q  95 ttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    |||||||||||||| |||||||||||||| || |  ||||| ||| ||||||||||| |||| |||||||    
T  37719905 ttttattgaaataaatgattttcacatctatttc-atttttctttcgtgatttcgtcgtcttagtgcgac 37719973  T

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Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 201
Target Start/End: Complemental strand, 27534423 - 27534367
Alignment:
Q  145 tttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgt 201  Q
    ||||||| |||| ||||||||||| || ||| || ||||||||||| ||||||||||    
T  27534423 tttcgtcgtcttagtgcgacattgttttgtttgtcgtctttgtgcggcgttgtttgt 27534367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 27534493 - 27534433
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatc 122  Q
    ||||| ||||||||  | ||||||||  |||| ||||||| ||||||||||||||||||||    
T  27534493 aaatcgtccctctacattgtttttctccttcctttttatttaaataagtgattttcacatc 27534433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 6e-86; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 19759750 - 19759985
Alignment:
Q  2 gccgtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttatt 101  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||        ||| ||||||| |||||||||||||||||||||||||||||||||    
T  19759750 gccgtcactcctttcttcttttcgtcggaggggtgatttagggtcaatttttg--acccaaaatcacccctctaactcgtttttctatttcccttttatt 19759847  T
Q  102 gaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgt 201  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||| |||| | ||||||||||||||||||||||    
T  19759848 gaaataagtgattttcacatttgttacgttttttattttgtgatttcgtcatcttcgagcgacgttggtttgttcatcgtctttgtgcgacgttgtttgt 19759947  T
Q  202 ctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||||||||||||||| ||||||||||||||||||||    
T  19759948 atttcttgtttctctcatgtatttgatcggttcagatt 19759985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 68 - 239
Target Start/End: Complemental strand, 23843512 - 23843341
Alignment:
Q  68 tccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacatt 167  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||    
T  23843512 tccctctaactcgtttttctatttcccttttattaaaataagtgattttcacatcttttacgttttttattttgtgatttcgtcgtcttcgtgcgacgtt 23843413  T
Q  168 ggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  23843412 ggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctcttaggtatttgatcggttcagatt 23843341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 20845027 - 20845205
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||    
T  20845027 aaaatcacccctctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgattttgtcatcttcgtg 20845126  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||| |||||| |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  20845127 cgacattggtttgttcgtcgtctttgtgcgacgctgtttgtttttcttgtttctctcagatatttgatcggttcagatt 20845205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 13234206 - 13234029
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| || ||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||    
T  13234206 acctaaaatca-ccttctaattcgtttttctttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtctt 13234108  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||||||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  13234107 cgtgcgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttca 13234029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 11425973 - 11426138
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||| ||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||  ||||||||||||||||||||||||||||  |||||    
T  11425973 ctcttactcgtttttctatttctcttttatttaaataagtgattttcacatctatttcgtttt--attttgtgatttcgtcatcttcgtgcgatgttggt 11426070  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  11426071 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatctcttcagatt 11426138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 62 - 239
Target Start/End: Complemental strand, 12576572 - 12576398
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||| || ||  ||||||||||||||| |||| |||| |||     
T  12576572 aaatcacccctctaacttgtttttctatttccctttaattgaaataagtgattttcacatctatttcg--ttttattttgtgattccgtcgtctttgtgt 12576475  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||| |||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||    
T  12576474 gacgttggtt-gttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcgcttcagatt 12576398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 32457665 - 32457842
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || |||||||||||||||| ||||  |||||||||||||||||| |||||||| | || | |||||||||||||||||||||| ||||||||    
T  32457665 aaaatcacccatctaactcgtttttctctttcatttttattgaaataagtgactttcacatgtatttcattttttattttgtgatttcgtcgtcttcgtg 32457764  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||| || |||||| ||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||    
T  32457765 cgacgttgatttgttcgtcgtctttgtgcgacattgtttat-tttcttgtttctctcaggtatttgatcggttcagatt 32457842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 16913348 - 16913523
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| ||||||||||||||||||  |||| |||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  16913348 aaatcacccctctaactcgtttttcactttcactttcattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgc 16913447  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||| | ||| |||||||||||||||||| |||| ||||||||||| |||||||||| |||||||||    
T  16913448 gacgttggtt-gttcatcgtccttgtgcgacgttgtttgtttttc-tgtttctctcatgtatttgatctgttcagatt 16913523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 31747985 - 31748154
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    ||||||||||||||||||| ||||| ||| |||||||||||| | |||||||||| || |||||||||||||||||||||| | ||||||||||||||||    
T  31747985 ccctctaactcgtttttctctttccttttaattgaaataagt-actttcacatctatttcgttttttattttgtgatttcgacgtcttcgtgcgacattg 31748083  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||  || || |||||||||||||||||||||| |||||||||||||||| |||||||||| || ||||||    
T  31748084 gtttctttgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttgatcagtacagatt 31748154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 61 - 249
Target Start/End: Complemental strand, 548960 - 548773
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||  |||||| ||||||||||||| || ||||||||    
T  548960 aaaatcacccctctaactcgtttttctttttcccttttattgaaataagcgattttcacatctattttgttttt-attttgtgatttcatcgtcttcgtg 548862  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    | |  |||||| |||||| |||||  || |||||||||| | |||||||||||| |||||||||||||||||||||||| |||| ||||    
T  548861 caatgttggtttgttcgtcgtcttcatgtgacgttgtttctttttcttgtttctatcaggtatttgatcggttcagattgtcatatcag 548773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 7049285 - 7049442
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||| |||||||||||||||||||||||||||||| |||| ||  ||||||| ||||||||||| |||||||||||||||| ||||||   || | |    
T  7049285 tttttctctttcccttttattgaaataagtgattttcatatctattt-gttttttgttttgtgattttgtcatcttcgtgcgacgttggtttcgtcatcg 7049383  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7049384 tctttgtgagacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 7049442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 8633273 - 8633113
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||   | |||||||||||||||||||| | |||||||||| ||||||    
T  8633273 tctaactcgtttttgtattttccttttattgaaataagtgattttcacatctatt--ttgttttattttgtgatttcgtcgttttcgtgcgacgttggtt 8633176  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||||| |||||||||||||   |||||| |||||||||||||||||||| ||||||| ||||||||    
T  8633175 -gttcgtcgtctttgtgcgac---gtttgtttttcttgtttctctcaggta-ttgatcgcttcagatt 8633113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 8644284 - 8644442
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||| ||||||||||||||||||||||| ||||||||||| || |||||||| ||||||||||| |||||||| |||||||||||    ||| || |    
T  8644284 tttttctctttcccttttattgaaataagtgtttttcacatctatttcgttttttcttttgtgattttgtcatcttagtgcgacattgtgctgttggtcg 8644383  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||| ||||| |||||||||||||||   ||||||||||| | ||||||||||    
T  8644384 tctttgtgcggcgttgcttgtctttcttgttttgttcaggtatttgtttggttcagatt 8644442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 195
Target Start/End: Complemental strand, 15128244 - 15128114
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||     || ||||||| |||||||||||||||| |||| |||    
T  15128244 aaaatcacccctctaactcgtttttctctttcccttgtattgaaataagtgattttcac----ctttcgtttttaattttgtgatttcgtcgtcttagtg 15128149  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgtt 195  Q
    |||| |||||| |||||| ||||||||||| ||||    
T  15128148 cgacgttggtttgttcgtcgtctttgtgcggcgtt 15128114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 249
Target Start/End: Original strand, 1944115 - 1944303
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||  ||| | ||  ||||||||||||||||||| ||| |||  ||     
T  1944115 aaaatcacccctctaactcgtttttctctttccctcttattgaaataagtgatttttgcatttattttgttttttattttgtgattttgtcgtctaagta 1944214  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    | || |||||| ||  || ||||||||||| ||||||||||||||||||| ||  ||||||| ||| | |||||| ||| |||| ||||    
T  1944215 caacgttggtttgtctgtcgtctttgtgcggcgttgtttgtctttcttgtgtcgttcaggtaattgtttggttcaaattgtcatatcag 1944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 10744598 - 10744780
Alignment:
Q  61 aaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgt---tttttattttgtgatttcgtcatctt 156  Q
    |||||||  ||||||||| ||||| ||||||| | ||||||||||||||||| ||| ||||||| ||  ||   ||||| ||||||||||||||| ||||    
T  10744598 aaaatcactcctctaacttgttttttctattttctttttattgaaataagtggtttacacatctattttgtttcttttttttttgtgatttcgtcgtctt 10744697  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||||||| ||| || |||||| ||||||||||||||||||||| |||||||| |||  | ||||||||| ||||||||||||    
T  10744698 agtgcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttggttcgtttaggtatttgttcggttcagatt 10744780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 32804313 - 32804492
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| || |||||||| ||||| || || |||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| || |||| ||    
T  32804313 aaaatcacccatctaactcattttttctcttacccttttattgaaataagtgattttcacatcttttttgttttttattttgtgatttcatcgtcttagt 32804412  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||  |||||| |||| | ||||||||  | ||||||||||||||||||||||  ||| ||||||| | | ||||||||    
T  32804413 gagatgttggtttgttcctcgtctttgtatggcgttgtttgtctttcttgtttcgttcatgtatttgtttgattcagatt 32804492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 250
Target Start/End: Complemental strand, 4663915 - 4663726
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||| ||||||| | |||| |||||||| |||||||||||||||||| || || |||| |||  |||||||||||||| |||| |||    
T  4663915 aaaatcacccctctaacacgtttttatgtttctcttttattaaaataagtgattttcacaactatttcgttgttttctttgtgatttcgtcgtcttagtg 4663816  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcagt 250  Q
    |||| ||  || ||||||  |||||||||||| |||||| | ||| |||||||  ||||||||||| | ||||| |||| |||| |||||    
T  4663815 cgacgttattttgttcgtcatctttgtgcgactttgtttttttttattgtttcgttcaggtatttgtttggttctgattgtcatatcagt 4663726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 33194634 - 33194802
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||||| |||||||||| |||||  ||||||||||||| | |||||||||||| ||  ||||||||||||||||||||||| | || ||| ||  |||||    
T  33194634 ctctaattcgtttttctctttcctctttattgaaataaattattttcacatctattttgttttttattttgtgatttcgtcgtgttagtgtgatgttggt 33194733  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | |||||| ||  ||| |||  |||||||||||||||| ||||  || |||||||| ||||||||||||    
T  33194734 ttgttcgtcgtacttgagcgttgttgtttgtctttcttatttccttcgggtatttgttcggttcagatt 33194802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 891615 - 891785
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||| |||||||||||||| ||| | |||||||||||||| |||||||||| ||| || ||||||||||||||||||||| |  |||  ||| | | |||    
T  891615 ccctataactcgtttttctgttttcattttattgaaataaatgattttcacgtctatttcgttttttattttgtgatttcatggtctgagtgtggctttg 891714  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| ||| ||  |||||||||   || ||||||||||||| ||||  ||||||||||| |||||| |||||    
T  891715 gtttgtttgtcatctttgtgcagtgtggtttgtctttcttatttcgttcaggtatttgttcggtttagatt 891785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 213
Target Start/End: Complemental strand, 5417223 - 5417141
Alignment:
Q  131 tttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    |||| |||||||||||||||| |||| ||||||| |||||| |||||| ||||||||||| |||||||| |||||||||||||    
T  5417223 ttttcattttgtgatttcgtcgtctttgtgcgacgttggtttgttcgtcgtctttgtgcggcgttgtttctctttcttgtttc 5417141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 72 - 237
Target Start/End: Original strand, 5544737 - 5544902
Alignment:
Q  72 tctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||||||||||||| ||  || ||||||||||||||||||||| || |||| | || |||||| |||||||| ||||| || || | ||||||  ||| |    
T  5544737 tctaactcgttttttctcctttccttttattgaaataagtgatatttacatatatttcgtttt-tattttgttatttcatcgtcctagtgcgatgttgat 5544835  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcaga 237  Q
    | |||||| ||||||||| ||||||||||||||||||| ||||  |||||| |||| | ||||||||    
T  5544836 ttgttcgtcgtctttgtgtgacgttgtttgtctttcttatttcgttcaggtgtttgtttggttcaga 5544902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 31804301 - 31804374
Alignment:
Q  95 ttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    ||||||||||||||||||||||||||||| || |||||||| ||| ||||||||||| |||| |||||||||||    
T  31804301 ttttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgtcgtcttagtgcgacattg 31804374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 148
Target Start/End: Complemental strand, 20745139 - 20745052
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttc 148  Q
    ||||||||| ||| |||| || ||||  |||||||||||||||||||| |||||||||||||| ||  ||||||||||||||| ||||    
T  20745139 aaaatcatctctccaacttgtctttcattttcccttttattgaaataaatgattttcacatctattttgttttttattttgtgctttc 20745052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 33541623 - 33541480
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| |||||||| ||||||||||  ||||||| |||| ||||||||||||||||||||   |  | ||||  ||||||||||| ||| |||| |||     
T  33541623 aaatcacccctctaaatcgtttttctccttcccttctatttaaataagtgattttcacatcgaattaggttttccttttgtgattttgtcgtcttagtgt 33541524  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    |||  || || ||| || |||||||||||| |||||||||||||    
T  33541523 gacgctgttttgtttgtcgtctttgtgcgatgttgtttgtcttt 33541480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 233
Target Start/End: Complemental strand, 12652286 - 12652120
Alignment:
Q  71 ctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac---at 166  Q
    ||||||||||||||| || ||| || |||||||||||||||||||||||||||| || ||  |||| ||| || ||||| || ||||  ||||||    |    
T  12652286 ctctaactcgttttttctcttttccatttattgaaataagtgattttcacatctatttcgccttttctttcgttatttcatcgtcttattgcgacgttgt 12652187  T
Q  167 tggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 233  Q
    || || |||||| || ||| ||||| ||||||| |||||||||||||  ||| ||||||| ||||||    
T  12652186 tgttttgttcgtcgtatttctgcgatgttgtttttctttcttgtttcgttcatgtatttgttcggtt 12652120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 903496 - 903563
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttc 148  Q
    ||||||| |||||||||| || |||||||| |||||||||||| ||   |||||||||||||||||||    
T  903496 tttttctctttcccttttgtttaaataagtaattttcacatctattttattttttattttgtgatttc 903563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 208
Target Start/End: Original strand, 22530299 - 22530446
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || | |||||| ||||||| |||||||||  |||||||||   |||||||||| | ||  ||||||| ||| ||||||||| | |||| |||    
T  22530299 aaaatcacccatttaactcctttttctctttccctttatttgaaataacaaattttcacatttatttagttttttctttcgtgatttcgacgtcttagtg 22530398  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttctt 208  Q
     ||| ||  || |||| |  ||||||||||| ||||||||||||||||    
T  22530399 agacgttattttgttcatcatctttgtgcgatgttgtttgtctttctt 22530446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 248
Target Start/End: Complemental strand, 15128111 - 15128037
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttca 248  Q
    ||||| |||||||||||| |||||||||||||||| ||||  ||| ||||||| || ||||||||| ||| ||||    
T  15128111 ttcgtcgtctttgtgcgatgttgtttgtctttcttctttcattcaagtatttgttctgttcagattgtcaattca 15128037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 31804352 - 31804417
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||||| ||||||| |||||||||||||||||||| |||| ||||||| ||  ||||||||    
T  31804352 ttcgtcgtcttagtgcgacattgtttgtctttcttgtttcgctcaagtatttgctcaattcagatt 31804417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 212
Target Start/End: Original strand, 904386 - 904438
Alignment:
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    |||||||| ||| |||||  ||||||||| |||||||||||||||||||||||    
T  904386 gcgacattagtttgttcgccgtctttgtgtgacgttgtttgtctttcttgttt 904438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 20496332 - 20496390
Alignment:
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||| |||| |||||||||||| ||||||   ||||||||||| ||||||||||||    
T  20496332 tctttgtacgactttgtttgtcttttttgttttgttcaggtatttgttcggttcagatt 20496390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 158; Significance: 4e-84; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 62 - 239
Target Start/End: Complemental strand, 23067942 - 23067765
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23067942 aaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtgc 23067843  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23067842 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 23067765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 62 - 239
Target Start/End: Complemental strand, 46716988 - 46716811
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  46716988 aaatcacctctctaactcgtttttctattttccttttattgaaataagtgattttcgcatctattacgttttttattttgtgatttcgtcatcttcgtgc 46716889  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46716888 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 46716811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 42971999 - 42972235
Alignment:
Q  1 agccgtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttat 100  Q
    ||||||||||||||| || |||||||||||||||||||||||||||||        ||| |||||||  | ||||||| ||||||||||||  |||||||    
T  42971999 agccgtcactcctttcttgttttcgtcggaagggtgatttagggtcaatttttg--acccaaaatcactcatctaacttgtttttctattttgcttttat 42972096  T
Q  101 tgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttg 200  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||| |||||| |||||| |||||| ||||||||| |||     
T  42972097 tgaaataagtgattttcacatttgttacgttttttattttgtggtttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttatgcgacgttatttt 42972196  T
Q  201 tctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42972197 tctttcttgtttctctcaggtatttgatcggttcagatt 42972235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 9661872 - 9662050
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  9661872 aaaatcacccctctaacttgtttttctttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 9661971  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  9661972 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 9662050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 4634302 - 4634480
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  |||||||| |||||||||||||| ||||||||    
T  4634302 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttaatttgtgatttcgtcgtcttcgtg 4634401  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  4634402 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 4634480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 14542607 - 14542429
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||| |||||||| |||||||  ||||| ||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  14542607 aaaatcatctctctaacttgtttttccttttcctttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 14542508  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  14542507 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 14542429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 9474623 - 9474456
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||| ||||||    
T  9474623 tctaactcatttttctctttcctttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtattcgtgcgacgttggtt 9474524  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  9474523 tgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgattggttcagatt 9474456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 41486594 - 41486772
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| |||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||| ||| |||| |||    
T  41486594 aaaatcacccctctaactcgtttttctctttcccttatattgaaataagagattttcacatctatttcgttttttattttgtgattttgtcgtctttgtg 41486693  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||  |||||| |||||| |||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  41486694 cgatgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcagctatttgatcggttcagatt 41486772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 31601443 - 31601273
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| ||||| |||||| |||||    
T  31601443 tctaactcgttttgctatttcccttttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttgcgacgttggt 31601344  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcagg--tatttgatcggttcagatt 239  Q
    | |||||| ||||||||||||| |||||| ||||||||||||||||||||  |||||||| ||||||||||    
T  31601343 ttgttcgtcgtctttgtgcgacattgtttatctttcttgtttctctcaggtatatttgattggttcagatt 31601273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 51646108 - 51646291
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||| || |||||||| ||| ||||||||||| ||||    
T  51646108 acctaaaatcacccctctaattcgtttttttatttcccttttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgtcgtctt 51646207  T
Q  157 cgtgcgaca-ttggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
      ||||||| ||| || |||||| |||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||||||||    
T  51646208 aatgcgacatttgttttgttcgtcgtctttgtgcgatgttgtttgtctttcttgtttcgctcaagtatttgttcggttcagatt 51646291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 64 - 239
Target Start/End: Original strand, 32189004 - 32189177
Alignment:
Q  64 atcatccctctaactcgtttttctatttccctttt-attgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcg 162  Q
    |||| |||||||| |||||||||| |||||||||| ||||||||||||||||||||||||| || ||||||||   ||||||||||||| ||||||||||    
T  32189004 atcacccctctaattcgtttttctttttccctttttattgaaataagtgattttcacatctatttcgtttttt---ttgtgatttcgtcgtcttcgtgcg 32189100  T
Q  163 acattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||    
T  32189101 acgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgattggttcagatt 32189177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 37869512 - 37869334
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||   |||| |||| |||||||| ||| ||||| ||    
T  37869512 aaaatcatccctctaactcgtttttatctttcccttttattgaaataagtgattttcacatctattttattttgtattatgtgattttgtcgtcttcttg 37869413  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| ||| ||||||||||||||||||| ||| | |||||||||||||| |||||||||||| |||||||||    
T  37869412 cgacgttggtttgtttgttgtctttgtgcgacgttatttatttttcttgtttctctaaggtatttgatcagttcagatt 37869334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 72 - 235
Target Start/End: Original strand, 12519686 - 12519849
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||| ||||||    
T  12519686 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtt 12519785  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
     |||||| || ||||||||| |||| ||||||||||||| ||  ||||||||||| | ||||||    
T  12519786 tgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttca 12519849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 46729007 - 46728837
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||| | |||||||||||||||||||||||||||||||||||| ||| ||| || ||||| || ||||||||||||||| |||| ||||||| |||    
T  46729007 ccctctaatttgtttttctatttcccttttattgaaataagtgatttacacgtctatttcgtttctttttttgtgatttcgtcgtcttagtgcgaccttg 46728908  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     || |||||| |||||||| |||||||||||| ||||||||||||  ||||||||||| ||||||||||||    
T  46728907 ttttgttcgtcgtctttgtacgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagatt 46728837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 15730077 - 15729898
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| ||||||| || |||||| |||||||||||||||||||||||||||||| ||| ||| || ||||| || ||||||||||||||| |||| ||    
T  15730077 aaaatcacccctctatcttgttttttctatttcccttttattgaaataagtgatttacacttctatttcgtttctttttttgtgatttcgtcgtcttagt 15729978  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| || |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||| || |||||||||    
T  15729977 gcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcagttcagatt 15729898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 38434618 - 38434796
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatct-gttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||  ||   |||||| ||||||||||||||| |||| |||    
T  38434618 aaatcacccctctaactcgtttttctatttctcttttattaaaataagtgattttcacatctattttatttttttcttttgtgatttcgtcgtcttagtg 38434717  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||| || |||||| |||||||| |||||||||||||||||||||||||  ||||||||||| ||  ||||||||    
T  38434718 cgacgttgttttgttcgtcgtctttgtccgacgttgtttgtctttcttgtttcgttcaggtatttgttcaattcagatt 38434796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 239
Target Start/End: Original strand, 28990328 - 28990495
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||| ||  ||||||||||||| ||||| ||| || | ||||||| ||||||    
T  28990328 tctaactcgtttttctctttctcttttattgaaataagtgattttcacatctattttgttttttattttgggattttgtcgtcatagtgcgacgttggtt 28990427  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||||||||||||||||||  ||||| |||||||||||||||  ||||| ||||| || |||||||||    
T  28990428 tgttcgttgtctttgtgcggtgttgtctgtctttcttgtttcgttcaggcatttgttccgttcagatt 28990495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 34115747 - 34115573
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||  |||||||||| ||||||||||||||||| |||||||||| | |||| || |||||||| |||||||||||||||| |||||||    
T  34115747 aaaatcacccctctagttcgtttttctctttcccttttattgaaagaagtgatttttatatctatttcgtttttttattttgtgatttcgtcgtcttcgt 34115648  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||  |||||||||||||||||||||||     | ||| |||||||||| ||||||||||||||||||||||    
T  34115647 gcgacgttggtatgttcgttgtctttgtgcgacgtt-----ttttttttgtttctcttaggtatttgatcggttcagatt 34115573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 43156796 - 43156973
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||||||||||  |  |||||||  |||||||||||||| |||| |||    
T  43156796 aaaatcacccctctaacacgtttta-tatttcctttttattgaaataagtgattttcacatctactttgtttttttctttgtgatttcgtcgtcttagtg 43156894  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | || ||| || |||||| | ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  43156895 caacgttgttttgttcgtcgactttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcggttcagatt 43156973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 20961480 - 20961645
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||| || ||  ||||||||||||||||| || |||||||||||| |||||    
T  20961480 ctcttacttgtttttctatttcccttttattgaaataagtgattttcacatctatttcg--ttttattttgtgatttcatcgtcttcgtgcgacgttggt 20961577  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||||||  ||||||| |||||||| || |   |||||||||||||||||||||||||| ||||||||    
T  20961578 t-gttcgtcatctttgtacgacgttggtttttcgtcttgtttctctcaggtatttgatcgcttcagatt 20961645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 4 - 161
Target Start/End: Complemental strand, 52555871 - 52555716
Alignment:
Q  4 cgtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttattga 103  Q
    |||||||||||| |||||||||||||| ||||||||||||| |||        ||| ||||||| | |||||||||||||||||||||  ||||||||||    
T  52555871 cgtcactcctttcttcttttcgtcggaggggtgatttagggacaatttttg--acccaaaatcacctctctaactcgtttttctatttatcttttattga 52555774  T
Q  104 aataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  52555773 aataagtgattttcacatcttttacgttttttattttgtgattttgtcgtcttcgtgc 52555716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 44375359 - 44375181
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  ||||||| |||||||||||||    |||| ||||||||||| |||||||||||| || | |||||||||||||||||||||| ||||||||    
T  44375359 aaaatcactcctctaattcgtttttctattattatttttttgaaataagtaattttcacatctatttctttttttattttgtgatttcgtcgtcttcgtg 44375260  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| || ||| |||||| |||| ||||||||||| ||||||||| || |||||||||| ||||| || ||||||||||    
T  44375259 cgacgttcgtttgttcgtcgtctgtgtgcgacgttatttgtcttttttatttctctcagatatttaattggttcagatt 44375181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 2945172 - 2945334
Alignment:
Q  77 ctcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttc 176  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| || || | ||||||| |||||| ||||    
T  2945172 ctcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcatcgtcatagtgcgacgttggtttgttc 2945271  T
Q  177 gttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     | |||| | |||| | ||||| || ||| |||||||  ||||||||||| ||||||||||||    
T  2945272 atcgtctgtatgcggcattgttagtgttttttgtttcgttcaggtatttgttcggttcagatt 2945334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 16991891 - 16992069
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| ||| ||||  | | || |||    
T  16991891 aaaatcacccatctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcattttttatttcgtggtttccccgttttagtg 16991990  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||| ||| || ||| || ||||||||||||||||||||| |||||||||||   |||||||||   ||||||||||||    
T  16991991 tgacgttgttttgtttgtcgtctttgtgcgacgttgtttgcctttcttgttttgttcaggtattctttcggttcagatt 16992069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 112 - 224
Target Start/End: Complemental strand, 50003220 - 50003108
Alignment:
Q  112 attttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtt 211  Q
    |||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||| ||||   |||||||||||||| |||||||||||||||||    
T  50003220 attttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcaccgtctttgtgcgacgatgtttgtctttcttgtt 50003121  T
Q  212 tctctcaggtatt 224  Q
    |||||||||||||    
T  50003120 tctctcaggtatt 50003108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 81 - 199
Target Start/End: Original strand, 40859685 - 40859803
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||  ||| ||||||||| | |||| ||||||| ||| || ||||||||    
T  40859685 tttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgacgttgttttgttcgttg 40859784  T
Q  181 tctttgtgcgacgttgttt 199  Q
    ||||||||||||| |||||    
T  40859785 tctttgtgcgacgctgttt 40859803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 100 - 239
Target Start/End: Complemental strand, 30470175 - 30470040
Alignment:
Q  100 ttgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgttt 199  Q
    |||||||||||||||||||||| | ||   | ||||||||||||| |||||| |||||||||||| |||||| ||| || ||||||||||||||||||||    
T  30470175 ttgaaataagtgattttcacatatatt--ttgttttattttgtga-ttcgtcgtcttcgtgcgacgttggtt-gtttgtcgtctttgtgcgacgttgttt 30470080  T
Q  200 gtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || ||||||||||||||||||| |||||||| ||||||||    
T  30470079 gtttttcttgtttctctcaggtgtttgatcgcttcagatt 30470040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 7242853 - 7242686
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    ||||||| |||||||| |||   ||||||||||||||| ||||||||||||| || | ||||||||| |||||| | ||| |||| ||||||| | | ||    
T  7242853 tctaacttgtttttctctttttattttattgaaataagcgattttcacatctatttcattttttattctgtgatattgtcgtcttagtgcgacgtcgatt 7242754  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||||| |||||||||||| |||||||||||||||| ||||  ||| ||||||| ||||||||||||    
T  7242753 tgttcgtcgtctttgtgcgaagttgtttgtctttcttatttcgttcaagtatttgttcggttcagatt 7242686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 54420807 - 54420705
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| |||| |||    
T  54420807 aaaatcactcctctaactcgtttttctattttccttttattgaaataagtga-tttcacatctatttcgttttttattttgtgatttcgtcgtctttgtg 54420709  T
Q  161 cgac 164  Q
    ||||    
T  54420708 cgac 54420705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 53903638 - 53903731
Alignment:
Q  70 cctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| || | |||||||||||||||||||||| ||||||| ||||    
T  53903638 cctctaactcgtttttctatttcccttttattgaaataagtga-tttcacatctatttcattttttattttgtgatttcgtcgtcttcgtacgac 53903731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 29589456 - 29589278
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatct-gttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| || |||||||||||||  ||||||| ||||||| |||||||||||||| ||||||  ||   |||||| |||||| |||||||| |||| ||    
T  29589456 aaaatcacccatctaactcgtttta-tatttcctttttattaaaataagtgatttttacatctacttggtttttttcttttgttatttcgtcgtcttagt 29589358  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| || ||| |||||||||||||||| ||||||||| ||||||||||  ||||||||||| ||  ||||||||    
T  29589357 gcgacgttgttttgtttgttgtctttgtgcgaccttgtttgtcattcttgtttcgttcaggtatttgttcatttcagatt 29589278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 244
Target Start/End: Complemental strand, 38170233 - 38170072
Alignment:
Q  82 ttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgt 181  Q
    |||||| ||||||||| ||||||||||||||||||||||| | || |||||||||||| |||||||| || |||| |||| | |||| || ||| || ||    
T  38170233 ttttctttttccctttcattgaaataagtgattttcacatttatttcgttttttatttcgtgatttcatcgtcttagtgcaatattgttttgtttgtcgt 38170134  T
Q  182 ctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    |||  | |||||||||||||||||||||||| | ||||||||||  || ||||||||| ||||    
T  38170133 cttcttacgacgttgtttgtctttcttgtttgt-tcaggtatttattccgttcagattgtcat 38170072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 46775951 - 46775774
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||| ||||| ||||||||||| ||||||||| |||||||||||| ||| | || ||| ||  ||||||| ||||||||||||||| |||| |||    
T  46775951 aaaatcatcactctatctcgtttttctctttccctttaattgaaataagtaattgttacctctattttgttttttcttttgtgatttcgtcgtcttagtg 46775852  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||| ||| ||| ||||| || |||||||| |||||||||||||| ||| |||  ||| ||||||| ||| ||||||||    
T  46775851 tgacgttgtttaattcgtcgt-tttgtgcggcgttgtttgtcttttttgcttcgttcatgtatttgttcgattcagatt 46775774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 4959670 - 4959495
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataa----gtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||| ||||||||| ||||||| ||||| ||| ||||||||||    ||||||||||||||| ||    ||||| ||| ||||||||||| ||||    
T  4959670 aaaatcatcactctaactcatttttctctttccgttt-attgaaataaataagtgattttcacatctatt-ttatttttctttcgtgatttcgtcgtctt 4959573  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttc 234  Q
     || |||||||| || ||||||||| |||||||||||||||||||||||||||||||  ||  ||||||| |||||||    
T  4959572 agtacgacattgttttgttcgttgtttttgtgcgacgttgtttgtctttcttgtttcgttcctgtatttgttcggttc 4959495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 72 - 171
Target Start/End: Original strand, 9549497 - 9549596
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| ||| ||||||||||||||||||||||| ||||||| || ||||||||||||| |||||||||| || |||||| || ||||||    
T  9549497 tctaactcgtttttctcttttccttttattgaaataagtgatttccacatctatttcgttttttattttttgatttcgtcgtcgtcgtgctacgttggtt 9549596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 199
Target Start/End: Complemental strand, 30416717 - 30416578
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||  ||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||    ||||| ||| |||||||||   |||| ||    
T  30416717 aaaatcacacctctaacttgttttttctatttcccttttattgaaataagtgattttcacatctatttttgtttttctttcgtgatttcgctgtcttagt 30416618  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgttt 199  Q
    ||||| ||| || |||||| ||||||||||||||||||||    
T  30416617 gcgacgttgttttgttcgtcgtctttgtgcgacgttgttt 30416578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 244
Target Start/End: Complemental strand, 4622790 - 4622621
Alignment:
Q  77 ctcgtttttctatttccctt-ttattgaaataagtgattttcacatctgttacgtt-ttttattttgtgatttcgtcatcttcgtgcgacattggttagt 174  Q
    ||||||||||| ||||| || ||||| ||||||||||||| ||||| | || |||| |||||||||||||||||||| |||| ||||||| | ||   ||    
T  4622790 ctcgtttttctctttcctttcttattaaaataagtgatttccacatttatttcgttcttttattttgtgatttcgtcgtcttagtgcgacgtgggagtgt 4622691  T
Q  175 tcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    | || ||||||||| | || ||||||||||||||||||  |||||||||| | |||||||||||| ||||    
T  4622690 ttgtcgtctttgtgtggcgctgtttgtctttcttgttttgctcaggtattggttcggttcagattgtcat 4622621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 6408459 - 6408614
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctg--ttacgttttttatttt-gtgatttcgtcatcttc 157  Q
    ||||||| | || |||||||||||| |||||||||||| ||||||||| |||||||||||||    || ||||||||  ||| ||||||||| | ||||     
T  6408459 aaaatcacctctttaactcgtttttatatttcccttttgttgaaataattgattttcacatcaaaatttcgtttttttctttcgtgatttcgacgtcttg 6408558  T
Q  158 gtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    ||||||| ||| || |||||| ||||||||||||| ||||||||||| ||||||||    
T  6408559 gtgcgacgttgtttggttcgtcgtctttgtgcgacattgtttgtcttacttgtttc 6408614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 6789949 - 6789806
Alignment:
Q  77 ctcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttc 176  Q
    ||||||||||| ||||| ||||||||||||||||||      ||||| || |||||||||||||||||||| ||| |||| ||||  | || ||| ||||    
T  6789949 ctcgtttttctctttccattttattgaaataagtga------catctatttcgttttttattttgtgattttgtcgtcttagtgcagcgtttgtttgttc 6789856  T
Q  177 gttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 226  Q
    || ||||||||||| | ||||||||||||||||||||  | |||||||||    
T  6789855 gtcgtctttgtgcgccattgtttgtctttcttgtttcgttaaggtatttg 6789806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 178
Target Start/End: Complemental strand, 1657648 - 1657544
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    |||||||||||||||||| | ||||||  |||| |||||||||||||||| || || ||||| ||||||||||||||| |||| ||||||||||| || |    
T  1657648 taactcgtttttctatttactttttataaaaattagtgattttcacatctatttcgctttttcttttgtgatttcgtcgtcttagtgcgacattgttttg 1657549  T
Q  174 ttcgt 178  Q
    |||||    
T  1657548 ttcgt 1657544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 213
Target Start/End: Complemental strand, 44021638 - 44021514
Alignment:
Q  89 tttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtg 188  Q
    |||||||||  ||| |||||||||||||||||||| |  |||||||||||||||||||| ||| ||||  || ||| |||||| |||||| ||||||  |    
T  44021638 tttccctttcgttgcaataagtgattttcacatctatatcgttttttattttgtgattttgtcgtcttaatgtgacgttggtttgttcgtcgtctttaag 44021539  T
Q  189 cgacgttgtttgtctttcttgtttc 213  Q
    || | ||||||||||||||||||||    
T  44021538 cggcattgtttgtctttcttgtttc 44021514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 235
Target Start/End: Original strand, 1124981 - 1125134
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    |||| ||||||||  |||||||||||||||||||||||||||| || | |||||  ||| ||||||||||| || | ||||||  ||| || ||  || |    
T  1124981 ttttcctatttcctatttattgaaataagtgattttcacatctatttcatttttc-tttcgtgatttcgtcgtcatagtgcgatgttgttttgtctgtcg 1125079  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    ||||| |||||||||| ||||||||||||||||  ||||||||||| | ||||||    
T  1125080 tctttttgcgacgttgattgtctttcttgtttcgttcaggtatttgtttggttca 1125134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 210
Target Start/End: Complemental strand, 36804644 - 36804503
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||| || ||| |||  |||| ||||||| |||||||||||||||| || | ||  ||||||| ||||||||||||||| |||| ||||| |||||    
T  36804644 ccctctaaatcctttctctcattcctttttatttaaataagtgattttcatatatatttggttttttcttttgtgatttcgtcgtcttagtgcggcattg 36804545  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgt 210  Q
     || ||| ||||||||| |||| | |||||||| ||||||||    
T  36804544 ttttgtttgttgtctttatgcggcattgtttgtatttcttgt 36804503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 54420723 - 54420658
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||    
T  54420723 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctgaggtatttgatcgcttcagatt 54420658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 210
Target Start/End: Original strand, 26625172 - 26625303
Alignment:
Q  78 tcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcg 177  Q
    ||||||||||  |||||||||||| |||| ||||||||||||| || ||  ||||||| ||||||||||||||   ||| |||||| |||| || |||||    
T  26625172 tcgtttttcttcttcccttttatttaaattagtgattttcaca-ctatttagttttttgttttgtgatttcgttgccttagtgcgatattgttttgttcg 26625270  T
Q  178 ttgtctttgtgcgacgttgtttgtctttcttgt 210  Q
    | ||||||||| |  ||||||||||||||||||    
T  26625271 tcgtctttgtgtggtgttgtttgtctttcttgt 26625303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 178
Target Start/End: Original strand, 28588580 - 28588698
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttccc-ttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||||| ||||| || | |||||| ||| |||||||| |  |||| ||    
T  28588580 aaaatcacccctctaactcgtttttctctttccctttttattgaaataaatgattttcgcatctatttcattttttctttcgtgatttctttgtcttagt 28588679  T
Q  160 gcgacattggttagttcgt 178  Q
    ||||| ||| || ||||||    
T  28588680 gcgacgttgttttgttcgt 28588698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 9526421 - 9526348
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgattt 147  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||| ||  ||||||| ||||| |||||    
T  9526421 taactcgtttttctctttccctttgattgaaataagtgattttcacatctattttgttttttcttttgcgattt 9526348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 14346547 - 14346628
Alignment:
Q  158 gtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||| ||| || |||||| ||| ||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  14346547 gtgcgacgttgttttgttcgtcgtcgttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgctcgattcagatt 14346628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 52555714 - 52555657
Alignment:
Q  182 ctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  52555714 ctttgtacgacgttgtttgtctttcttgtttctcttaggtatttaatcggttcagatt 52555657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 235
Target Start/End: Original strand, 3169501 - 3169619
Alignment:
Q  112 attttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtt 211  Q
    |||||||||||| ||   |||||||||||||||||||||  |     |||||  |||| | |||||||||||||||||| ||||||||||||||||||||    
T  3169501 attttcacatctattttattttttattttgtgatttcgttgt-----tgcgatgttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtt 3169595  T
Q  212 tctctcaggtatttgatcggttca 235  Q
    ||  |||| |||||| ||||||||    
T  3169596 tcgttcagatatttgttcggttca 3169619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 205
Target Start/End: Original strand, 5388535 - 5388678
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| |||||||| ||||||||||  |||||| ||||| ||||||||||||||||||||   |  | ||||| ||| |||| |||||| |||| |||     
T  5388535 aaatcacccctctaaatcgtttttctccttccctcttatttaaataagtgattttcacatcgaattaggtttttctttcgtgagttcgtcgtcttagtgt 5388634  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    ||||||| || | | || |||||||||||  |||||||||||||    
T  5388635 gacattgttttggttgtcgtctttgtgcggtgttgtttgtcttt 5388678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 29474311 - 29474245
Alignment:
Q  173 gttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| |||||||||||||||||||||  |||||||||||  ||||||||||| ||||||||||||    
T  29474311 gttcgtcgtctttgtgcgacgttgtttgcttttcttgtttcgttcaggtatttgttcggttcagatt 29474245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Original strand, 40859805 - 40859871
Alignment:
Q  173 gttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| |||||||||||||||||||||||||||||||||   || |||||||| ||||||||||||    
T  40859805 gttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcggttcagatt 40859871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 53903713 - 53903778
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||||| || ||||||||||||| |||| ||||||||||||||||||||||| ||||||||    
T  53903713 ttcgtcgtcttcgtacgacgttgtttgtttttcctgtttctctcaggtatttgatcgcttcagatt 53903778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 117
Target Start/End: Complemental strand, 1646036 - 1645980
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttc 117  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  1646036 aaaatcacccctctaactcgtttttctctttctcttttattgaaataaatgattttc 1645980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 29577098 - 29577034
Alignment:
Q  180 gtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    ||||||||||| |||||||||||||| |||||||  ||||||||||| |||||||||||| ||||    
T  29577098 gtctttgtgcggcgttgtttgtcttttttgtttcgttcaggtatttgttcggttcagattgtcat 29577034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 1645594 - 1645476
Alignment:
Q  112 attttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtt 211  Q
    |||||||||||| ||   |||||||||||||||||||||| |     ||||   |||| | |||||||||||||||||| ||||||||||||||||||||    
T  1645594 attttcacatctattttattttttattttgtgatttcgtcgt-----tgcggtgttgggttgttcgttgtctttgtgcggcgttgtttgtctttcttgtt 1645500  T
Q  212 tctctcaggtatttgatcggttca 235  Q
    ||  |||| |||||| | ||||||    
T  1645499 tcgttcagatatttgtttggttca 1645476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 140
Target Start/End: Complemental strand, 29474429 - 29474370
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttatttt 140  Q
    ||||||||||||||||||||||||||||||||||| || |||| || |||||||| ||||    
T  29474429 tttttctatttcccttttattgaaataagtgatttacatatctatttcgttttttttttt 29474370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 23926061 - 23926161
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatc-tgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||| |||||||||| ||||||||  ||||||| |||| ||||||||||||||||||||  |||| | ||||| ||| ||||||||||| |||| |||    
T  23926061 aaatcacccctctaacttgtttttctccttcccttctatttaaataagtgattttcacatcgagtta-ggtttttctttcgtgatttcgtcgtcttagtg 23926159  T
Q  161 cg 162  Q
    ||    
T  23926160 cg 23926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 244
Target Start/End: Complemental strand, 46386858 - 46386686
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||||||| |||||||| |||||||||||||||||||| ||||||  | |||| || | |||||| ||| |  ||||| || |||| |||| || ||| |    
T  46386858 ctctaacttgtttttctctttcccttttattgaaataaatgattta-agatctatttcattttttctttcgaaatttcatcgtcttagtgcaactttgtt 46386760  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    | |||||  || |||||||| | |||||||| |||||||||||  | ||||||||| || ||||| ||| ||||    
T  46386759 ttgttcgccgtgtttgtgcgtcattgtttgtttttcttgtttcgtttaggtatttgttctgttcaaattgtcat 46386686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 3169059 - 3169115
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttc 117  Q
    ||||||| ||||||||||||||||| | |||| ||||||||||||||| ||||||||    
T  3169059 aaaatcacccctctaactcgtttttttctttctcttttattgaaataaatgattttc 3169115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 3673643 - 3673703
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatc 122  Q
    |||||| |||||||| ||||||||||  |||| ||||||| ||||||||||||||||||||    
T  3673643 aaatcacccctctaaatcgtttttctccttcctttttatttaaataagtgattttcacatc 3673703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 201
Target Start/End: Original strand, 29257274 - 29257384
Alignment:
Q  90 ttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgc 189  Q
    |||| ||||||| ||||||||||||||||| ||| ||  |||||| ||||  |||||| ||||||||  |||||| ||| || ||| || ||||||||||    
T  29257274 ttcctttttatttaaataagtgattttcacttctatttagttttt-atttcatgattttgtcatcttattgcgacgttgttttgttagtcgtctttgtgc 29257372  T
Q  190 gacgttgtttgt 201  Q
     |||||||||||    
T  29257373 aacgttgtttgt 29257384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 33021009 - 33020876
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctg-ttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||| || |||||||  ||||||| |||| ||||||||||||||||||||   ||| || ||   |||||||||||| ||||||| |||||||  || |    
T  33021009 tctaaatcatttttcttcttcccttctatttaaataagtgattttcacatcgaattatgtattcc-ttttgtgatttcatcatcttagtgcgacgctgtt 33020911  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    | ||| || ||||||||||| ||||||||||||||    
T  33020910 ttgtttgtcgtctttgtgcggcgttgtttgtcttt 33020876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 30416603 - 30416510
Alignment:
Q  146 ttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| |||| ||||||| ||| || |||||| ||||||| |||||||||||| ||||| ||||||   |  |||||||| ||||||||||||    
T  30416603 ttcgtcgtctttgtgcgacgttgttttgttcgtcgtctttgcgcgacgttgtttctcttttttgttttgtttgggtatttgttcggttcagatt 30416510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 11817091 - 11817151
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacat 121  Q
    ||||||| |||||||  ||||||||||  ||||||||| || |||||||||||||||||||    
T  11817091 aaaatcacccctctacatcgtttttctccttcccttttgtttaaataagtgattttcacat 11817151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 35338426 - 35338586
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    |||||| || |||| |||||||| | |||||||||||||| || || | | || ||||||||||||| ||||||  || |||| ||| ||| |   || |    
T  35338426 taactcattcttctctttcccttatgttgaaataagtgatgtttacttgtatttcgttttttattttatgattttatcgtcttagtgggacgtcaatttg 35338525  T
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttc 234  Q
    |||||  |||||||||| ||||  |||||||||||||||   |||| |||||| |||||||    
T  35338526 ttcgtcatctttgtgcggcgttacttgtctttcttgttttgttcagatatttgttcggttc 35338586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 46717053 - 46717009
Alignment:
Q  4 cgtcactcctttattcttttcgtcggaagggtgatttagggtcaa 48  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||    
T  46717053 cgtcactcctttcttcttttcatcggatgggtgatttagggtcaa 46717009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 9549594 - 9549629
Alignment:
Q  196 gtttgtctttcttgtttctctcaggtatttgatcgg 231  Q
    ||||||||||||||||||||| ||||||||||||||    
T  9549594 gtttgtctttcttgtttctctaaggtatttgatcgg 9549629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 20 - 239
Target Start/End: Complemental strand, 44562883 - 44562666
Alignment:
Q  20 ttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcac 119  Q
    ||||||||||| |||||||||||||||||        ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44562883 ttttcgtcggatgggtgatttagggtcaatttttg--acccaaaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcac 44562786  T
Q  120 atctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcag 219  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  44562785 atctgttacgttttatattttgtgatttcgtcatcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcag 44562686  T
Q  220 gtatttgatcggttcagatt 239  Q
    ||||||||| ||||||||||    
T  44562685 gtatttgataggttcagatt 44562666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 21326434 - 21326670
Alignment:
Q  1 agccgtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttat 100  Q
    |||||||||| |||| |||||||||| ||| |||||||||||| ||||        | | ||||||| ||||||||||||||||||||||||||||||||    
T  21326434 agccgtcacttctttcttcttttcgttggaggggtgatttaggatcaatttttg--aacaaaaatcacccctctaactcgtttttctatttcccttttat 21326531  T
Q  101 tgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttg 200  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||| |||||||| |||||||||| |||||| |||||||||||||||||||||    
T  21326532 tgaaataagtgattttcacatctgttgcgttttttattttacgatttcgtcgtcttcgtgtgacattggtttgttcgtcgtctttgtgcgacgttgtttg 21326631  T
Q  201 tctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  21326632 tctttcttgtttttctcaggtatttgatcggttcagatt 21326670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 23320459 - 23320637
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23320459 aaaatcacccctctaactcgtttttctatttcccttttattgaaataagtcattttcacatctgttacgttttttattttgtgatttcgtcgtcttcgtg 23320558  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||| |||||| |||||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  23320559 tgacgttggtttgttcgtcgtctttgtgcgacgttatttgtctttcttgtttctctcatgtatttgatcggttcagatt 23320637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 5832253 - 5832431
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttt-ttattttgtgatttcgtcatcttcgtg 160  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||| ||||| ||    
T  5832253 aaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttg 5832352  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5832353 cgacgttggtttgttcgtcgtatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 5832431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 22345007 - 22344829
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  22345007 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 22344908  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  22344907 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 22344829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 62 - 232
Target Start/End: Complemental strand, 630879 - 630708
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcatcttcgtg 160  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||| ||||| ||    
T  630879 aaatcacccatctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttttattttgtgatttcgtcgtcttcttg 630780  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggt 232  Q
    |||| |||||| |||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  630779 cgacgttggtttgttcgtcgtctttgtgcgacgttgttcgtctttcttgtttctctcaagtatttgatcggt 630708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 4564537 - 4564713
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  4564537 aaaatcacccctctaactcgtttttctatttctcttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtg 4564635  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| ||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||    
T  4564636 cgacgttggtt-gttagtcgtctttgtgcgacgttgtttgtttttcttatttctctcaggtatttgatcgcttcagatt 4564713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 23257108 - 23257285
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| |||||| |||||||||||  ||||||||||||||||||||||||||||||||| | ||  ||||||||| |||||||||| || |||||||||    
T  23257108 aaatcacccctctcactcgtttttccctttcccttttattgaaataagtgattttcacatttattttgttttttatcttgtgatttcatcgtcttcgtgc 23257207  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  23257208 gacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgattggtccagatt 23257285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 15276545 - 15276363
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || ||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| | ||||||    
T  15276545 aaaatcacccatctcactcgtttttctctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgttttcgtg 15276446  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtct----ttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||| ||||||| | |    ||||||||||||||||||||||||||||||||||||    
T  15276445 cgacgttggtttgttcgtcgtctttgtgcgatgttgttttttttttcttcttgtttctctcaggtatttgatcggttcagatt 15276363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 72 - 239
Target Start/End: Original strand, 15698230 - 15698395
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| ||| ||||||    
T  15698230 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtctttgtgtgacgttggtt 15698329  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||| | ||||||| |||||||||||||| ||| |||||||||||||||||||||| ||||||||||    
T  15698330 -gttcatcgtctttgggcgacgttgtttgt-tttgttgtttctctcaggtatttgattggttcagatt 15698395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 38646603 - 38646781
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || | |||||||||||||| |||  ||||||||||||||||||||||| |||||| || | |||||||||||||||||| ||| ||||||||    
T  38646603 aaaatcacccatgtaactcgtttttctctttttcttttattgaaataagtgattttaacatctatttcattttttattttgtgattttgtcgtcttcgtg 38646702  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||| |||||| | |||||||||||    
T  38646703 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcatgtatttaaccggttcagatt 38646781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 38644871 - 38644714
Alignment:
Q  82 ttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgt 181  Q
    |||||| |||| ||||| ||||||||||||||||||| ||   || ||||||||||||||||||||| || ||||||||||||||||||| |||||| ||    
T  38644871 ttttctttttctctttttttgaaataagtgattttcaaataaattccgttttttattttgtgatttcttcgtcttcgtgcgacattggtttgttcgtcgt 38644772  T
Q  182 ctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| || |||||||    
T  38644771 ctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgattggctcagatt 38644714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 10877365 - 10877517
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  |||||||||||||||||| ||||||||||||||||| |||||||||||| |||| || |||||||| ||| |||||||||||||||| |||    
T  10877365 aaaatcacacctctaactcgtttttctctttcccttttattgaaaaaagtgattttcatatctatttcgttttttctttcgtgatttcgtcatcttagtg 10877464  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    |||| ||| || |||||||||||||||| | ||||||||||||||||||||||    
T  10877465 cgacgttgttttgttcgttgtctttgtgtggcgttgtttgtctttcttgtttc 10877517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 212
Target Start/End: Original strand, 1767994 - 1768135
Alignment:
Q  70 cctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattgg 169  Q
    ||||||| |||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||| ||| ||||    
T  1767994 cctctaattcgtttttctctttcccttttattgaaataaatgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgtgacgttgg 1768093  T
Q  170 ttagttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    || |||||| ||||||||||||| |||||||| ||||||||||    
T  1768094 tt-gttcgtcgtctttgtgcgacattgtttgtttttcttgttt 1768135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 61 - 243
Target Start/End: Original strand, 8893312 - 8893494
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||| ||| |||||||| || |||| ||     
T  8893312 aaaatcacccttctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgtcttttctttcgtgatttcatcgtcttagta 8893411  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttca 243  Q
    ||||||||  | | |||| ||||||||| | |||||||||||||||||||||   ||||||||||| ||||||||||||||||    
T  8893412 cgacattgtgttgctcgtcgtctttgtgaggcgttgtttgtctttcttgttttgttcaggtatttgttcggttcagattttca 8893494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 36621391 - 36621549
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||| |||| ||||||||||||||||||| |||||||||| || |||||||| ||||||||||| ||| |||||||||| | |||||| ||| || |    
T  36621391 tttttctctttctcttttattgaaataagtgactttcacatctatttcgttttttgttttgtgattttgtcgtcttcgtgcggcgttggtttgtttgtcg 36621490  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||    
T  36621491 tctttgtgcgacatagtttgtttttcttgtttctttcaggtatttgatcggttcagatt 36621549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 12148133 - 12147965
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| ||  ||||||| ||| |||||| |||| |||| ||| ||| ||| |    
T  12148133 ctctaactcgtttttctatttcctttttattcaaataagtgattttcacatctattttgttttttctttcgtgattccgtcgtcttagtgtgactttgtt 12148034  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||||||||| ||||||| || ||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  12148033 ttgttcgttgtttttgtgcaacattgtttgtctttcttgtttcgttcaggtatttgttcgattcagatt 12147965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 12967757 - 12967649
Alignment:
Q  131 tttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcg 230  Q
    |||||||||||||||| ||||||| ||||||||| |||||| |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12967757 tttttattttgtgattccgtcatcatcgtgcgacgttggtttgttcgtcgtctttgtgcgacattgtttgtctttcttgtttctctcaggtatttgatcg 12967658  T
Q  231 gttcagatt 239  Q
    |||||||||    
T  12967657 gttcagatt 12967649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 239
Target Start/End: Original strand, 28213082 - 28213245
Alignment:
Q  73 ctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtta 172  Q
    ||||||||||||||| ||| ||||| ||   |||||||||||| ||||||| || |||||||||||||||||||| ||| |||| ||||| | || |||     
T  28213082 ctaactcgtttttctcttttcctttaatg--aataagtgattt-cacatctatttcgttttttattttgtgattttgtcgtctttgtgcggcgttagttt 28213178  T
Q  173 gttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||    
T  28213179 gttcgtcgtctttgtgcgacattgtttgtctttcttgtttctttcaggtatttgttcggttcagatt 28213245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 230
Target Start/End: Original strand, 49651865 - 49652032
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttt---------ttattttgtgatttcgtcatcttcgtgcg 162  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||| || ||||||         |||||||||||||||||| |||||||| |    
T  49651865 tctaactcgtttttctatttcctttttattgaaataaatgaatttcacatctatttcgttttttttattttttattttgtgatttcgtcgtcttcgtgtg 49651964  T
Q  163 acattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcg 230  Q
    || || ||| |||||| |||||||| |||||||||||||||||||||||||||||| ||| |||||||    
T  49651965 acgttcgtttgttcgtcgtctttgtacgacgttgtttgtctttcttgtttctctcaagtaattgatcg 49652032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 212
Target Start/End: Complemental strand, 40488491 - 40488341
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| ||||||||||  ||||||| ||||||||||||||||||||  ||||||||||||| || |||||||| ||||||||||||||| |||| ||||    
T  40488491 aaatcacccctctaacttatttttctctttcccttttattgaaataaacgattttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgc 40488392  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    ||| ||| || ||| || |||||||||||||||| | ||||||||||||||    
T  40488391 gacgttgttttgtttgtcgtctttgtgcgacgttatctgtctttcttgttt 40488341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 222
Target Start/End: Complemental strand, 27469797 - 27469642
Alignment:
Q  67 atccctctaactcgtttttctatttccctttt-attgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgaca 165  Q
    |||||||||||||||||| |||||| | |||| ||| |||||||| |||||||||||| || |||||||| ||||||||||||||| |||| |||||||     
T  27469797 atccctctaactcgtttt-ctatttacttttttattaaaataagttattttcacatctatttcgttttttcttttgtgatttcgtcgtcttagtgcgacg 27469699  T
Q  166 ttggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggta 222  Q
    ||| || |||| | ||||||||||||||||||||||||||||||||||  |||||||    
T  27469698 ttgttttgttcatcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaggta 27469642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 61 - 201
Target Start/End: Original strand, 52752047 - 52752182
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||||     |||||||| ||  ||||||||||||||||||| ||| |||||||     
T  52752047 aaaatcacctctctaactcgtttttctttttcccttttattgaaataagt-----tcacatctattttgttttttattttgtgattttgtcgtcttcgta 52752141  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgt 201  Q
    ||||||||||| |||||| ||||||||||||||||||||||    
T  52752142 cgacattggtttgttcgtcgtctttgtgcgacgttgtttgt 52752182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 239
Target Start/End: Original strand, 52839571 - 52839727
Alignment:
Q  83 tttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtc 182  Q
    |||||| |||||||||||||||||||||||||||||||| | || |||||||| ||| ||||||| ||| |||| ||||||| ||| || ||||||  ||    
T  52839571 tttctaattcccttttattgaaataagtgattttcacatttatttcgttttttctttcgtgattttgtcgtcttagtgcgacgttgttttgttcgtcatc 52839670  T
Q  183 tttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| ||||||||||||||||||||||||  ||||||||||| || | |||||||    
T  52839671 tttgtgagacgttgtttgtctttcttgtttcgttcaggtatttgttcagctcagatt 52839727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 40992353 - 40992458
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaa--taagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcg 158  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||  |||||||||||||||| | || |||||||||||||||||||||||||||||||    
T  40992353 aaaatcacccctctaactcgtttttctctttcccttttattgaaaaataagtgattttcacatttatttcgttttttattttgtgatttcgtcatcttcg 40992452  T
Q  159 tgcgac 164  Q
    ||||||    
T  40992453 tgcgac 40992458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 33703583 - 33703427
Alignment:
Q  82 ttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgt 181  Q
    |||||||||||||||||||||||||||||||||||||||||| || || ||||| ||| ||||||||||| |||| || || | ||| || ||| || ||    
T  33703583 ttttctatttcccttttattgaaataagtgattttcacatctatttcg-tttttctttcgtgatttcgtcgtcttagtacggcgttgttttgtttgtcgt 33703485  T
Q  182 ctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||||||||||||||||||||||  ||| ||||||| | | ||||||||    
T  33703484 ctttgtgcgacgttgtttgtctttcttgtttcgttcacgtatttgtttgattcagatt 33703427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 243
Target Start/End: Original strand, 29067080 - 29067250
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||| || | || |||  ||||||||||| || |||| ||||||| ||| ||    
T  29067080 tctaactcgtttttctctttcccttttattgaaataagtgattctcacatctatttc-ttcttttctttgtgatttcatcttcttagtgcgacgttgttt 29067178  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttca 243  Q
     |||||| ||||||||||  |||||||||||||||||||||   ||| ||||||  |||||||| |||||||    
T  29067179 tgttcgtcgtctttgtgcagcgttgtttgtctttcttgttttgttcaagtatttattcggttcaaattttca 29067250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 32539273 - 32539134
Alignment:
Q  73 ctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtta 172  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||| ||||| ||  ||||||||||||||||||| ||| |||| || |||| ||||||     
T  32539273 ctaactcatttttctctttcatttttattgaaataagtgattttcgcatctattttgttttttattttgtgattttgtcgtcttagtacgacgttggttt 32539174  T
Q  173 gttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    |||||| |||||||||||||||||||||| ||| ||||||    
T  32539173 gttcgtcgtctttgtgcgacgttgtttgtttttattgttt 32539134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 45659071 - 45659171
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||| || | |||||||||||||||||||||| |||| ||||||| |||||    
T  45659071 ctctaactcgtttttctctttaccttttattgaaataagtgattttcacatctatttcattttttattttgtgatttcgtcgtctttgtgcgacgttggt 45659170  T
Q  171 t 171  Q
    |    
T  45659171 t 45659171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 164
Target Start/End: Complemental strand, 14717330 - 14717234
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttta-ttttgtgatttcgtcatcttcgtgcgac 164  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  |||||||| ||||||||||||||| |||| |||||||    
T  14717330 ccctctaactcgtttttctttttcccttttattgaaataagtgattttcacatctattttgttttttatttttgtgatttcgtcgtctttgtgcgac 14717234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 168
Target Start/End: Complemental strand, 6212981 - 6212874
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |   ||||||||||||| ||||||||| |||| |||    
T  6212981 aaaatcacacctctaactcgtttttccttttcccttttattgaaataagtgattttcacatctatcttgttttttattttgggatttcgtcgtctttgtg 6212882  T
Q  161 cgacattg 168  Q
    ||||||||    
T  6212881 cgacattg 6212874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 33177691 - 33177515
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||||| |||||||| ||||| | ||||| ||||||||||||||||||||||||||||  || |||||||| ||| |||||||| |  |||| |||    
T  33177691 aaaatcatccatctaactccttttt-tctttcctttttattgaaataagtgattttcacatccatttcgttttttctttcgtgatttcattgtcttagtg 33177593  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||  | |||||  |||||||||| ||||||||||| ||| ||||||   ||| ||||||| ||||||||||||    
T  33177592 cgacgttgtgttgttcgccgtctttgtgcaacgttgtttgtgttt-ttgttttgttcatgtatttgttcggttcagatt 33177515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 236
Target Start/End: Original strand, 26199635 - 26199774
Alignment:
Q  84 ttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtct 183  Q
    |||||||||||||| |||||||||||||||||||||||||            ||||| ||||||| || |||| ||||||||||| || |||||| ||||    
T  26199635 ttctatttcccttt-attgaaataagtgattttcacatct------------attttttgatttcatcgtcttagtgcgacattgttttgttcgtcgtct 26199721  T
Q  184 ttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    |||||||||||||||| |||||||||||||  ||||||||||| ||| |||||    
T  26199722 ttgtgcgacgttgtttatctttcttgtttcgttcaggtatttgttcgattcag 26199774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 35077985 - 35077890
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||| | ||||||||||||||||| ||||  ||||||||||||||||||||||||||||| || |||||||| ||| ||||||||||| ||||    
T  35077985 aaaatcacctctctaactcgtttttctctttcatttttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgtcgtctt 35077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 22032184 - 22032012
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||| | ||||| || ||| ||||||||||||||||||| ||||||||||| ||  |||||||||||||| ||||| |  |||| |||    
T  22032184 aaaatcacccctctaaattgtttt-ctcttttccttttattgaaataagtgtttttcacatctcttttgttttttattttgtaatttc-ttgtcttagtg 22032087  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||  |||||| |||||| |||||| || | ||||||||| ||||||||||||  || |||||||| || |||||    
T  22032086 cgatgttggtttgttcgtcgtctttatgtggcgttgtttgcctttcttgtttcgttccggtatttgttcagttca 22032012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 239
Target Start/End: Complemental strand, 14717252 - 14717187
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||    
T  14717252 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcagatatttgatcggttcagatt 14717187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 161
Target Start/End: Original strand, 900142 - 900241
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttccctttt-attgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||| |||| |||||| ||||| | |||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| |||    
T  900142 aaatcacccctgtaactcattttt-tctttccctttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcgtctttgtg 900240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 44514064 - 44513919
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||||||||||||||||||||||||||||||| ||||||  ||  |||| || |||||||| |||||| |||| ||||||| |||                
T  44514064 tttttctatttcccttttattgaaataagtgatttacacatccattttgtttctttttttgtgaattcgtcgtcttagtgcgaccttg------------ 44513977  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
      |||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  44513976 -ttttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcgattcagatt 44513919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 45659146 - 45659211
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||    
T  45659146 ttcgtcgtctttgtgcgacgttggttgtttttcttgtttctcttaggtatttgatcggttcagatt 45659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 90 - 205
Target Start/End: Original strand, 34566736 - 34566851
Alignment:
Q  90 ttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgc 189  Q
    |||||||||||| ||||||||||||||||||||   |  | ||||  ||||||||||||||| |||| |||||||  || || ||| || ||||||||||    
T  34566736 ttcccttttatttaaataagtgattttcacatcgaattaggttttccttttgtgatttcgtcgtcttagtgcgaccctgttttgtttgtcgtctttgtgc 34566835  T
Q  190 gacgttgtttgtcttt 205  Q
    ||||||||||||||||    
T  34566836 gacgttgtttgtcttt 34566851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 37700327 - 37700484
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttccctttt--attgaaataagtgattttcacatctgttacg----ttttttattttgtgatttcgtcatc 154  Q
    |||||||  ||||||||||||||| |||||||| ||||  |||||||||||||||||||||| ||||| ||    |||||| ||||||||||||||| ||    
T  37700327 aaaatcaatcctctaactcgtttt-ctatttcctttttttattgaaataagtgattttcacacctgtttcgtttttttttttttttgtgatttcgtcgtc 37700425  T
Q  155 ttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    || | |||||  ||  |   |||| ||||||||  ||||||||||||||||||||||||    
T  37700426 ttagcgcgacggtgtcttaatcgtcgtctttgtatgacgttgtttgtctttcttgtttc 37700484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 6212896 - 6212835
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    ||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  6212896 ttcgtcgtctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcgattca 6212835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 17579787 - 17579844
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttca 118  Q
    ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  17579787 aaaatcatccctctaactcatttttctctttccctttaattgaaataagtgattttca 17579844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 205
Target Start/End: Original strand, 2350645 - 2350785
Alignment:
Q  65 tcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    ||||||||| || || |||||||  |||| ||||||| ||||||||||||||||||||   |  | ||||  ||||||||||| ||| |||| |||||||    
T  2350645 tcatccctccaagtcatttttcttcttccattttatttaaataagtgattttcacatcaaattagattttccttttgtgatttagtcgtcttagtgcgac 2350744  T
Q  165 attggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
     ||| || ||| || |||| |||||||||||||||||||||    
T  2350745 gttgttttgttggtcgtctctgtgcgacgttgtttgtcttt 2350785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 37685191 - 37685033
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttccctttt--attgaaataagtgattttcacatctgttacg-----ttttttattttgtgatttcgtcat 153  Q
    |||||||  ||||||||||||||| |||||||| ||||  |||||||||||||||||||||| ||||| ||     |||||| ||||||||||||||| |    
T  37685191 aaaatcaatcctctaactcgtttt-ctatttcctttttttattgaaataagtgattttcacacctgtttcgttttttttttttttttgtgatttcgtcgt 37685093  T
Q  154 cttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    ||| | |||||  ||  |   |||| ||||||||  ||||||||||||||||||||||||    
T  37685092 cttagcgcgacggtgtcttaatcgtcgtctttgtatgacgttgtttgtctttcttgtttc 37685033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 40992447 - 40992499
Alignment:
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 233  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  40992447 tcttcgtgcgacgttgtttgtgtttcttgtttctctcaggtatttgatcggtt 40992499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 239
Target Start/End: Original strand, 11121071 - 11121173
Alignment:
Q  137 ttttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    ||||||||||||||| |||| ||||||  |||  | ||||||  ||||||||| ||||||||||||||||||||||   ||| ||||||| |||||||||    
T  11121071 ttttgtgatttcgtcgtcttagtgcgaggttgtgttgttcgtcatctttgtgcaacgttgtttgtctttcttgttttgttcatgtatttgttcggttcag 11121170  T
Q  237 att 239  Q
    |||    
T  11121171 att 11121173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 239
Target Start/End: Original strand, 10264825 - 10264906
Alignment:
Q  158 gtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||| |||||| |||||| |||||||||| ||||||||||| |||||| ||||  ||||||||||| ||| ||||||||    
T  10264825 gtgcgacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttttttcgttcaggtatttgttcgattcagatt 10264906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 46589279 - 46589344
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||||||||||| || ||||||||||||||||||| |||| ||||||| ||||||||||||    
T  46589279 ttcgtcgtctttgtgcggcggtgtttgtctttcttgtttcgctcaagtatttgttcggttcagatt 46589344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 13691853 - 13691750
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||| ||||||||||  ||| ||| |||| ||||||||||||||||||||   |  | ||| | |||||||||||||||||||| |||    
T  13691853 aaaatcacccctctaaatcgtttttctccttcacttctatttaaataagtgattttcacatcgaattaggtttctcttttgtgatttcgtcatcttagtg 13691754  T
Q  161 cgac 164  Q
    ||||    
T  13691753 cgac 13691750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 69 - 123
Target Start/End: Original strand, 46589202 - 46589255
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatct 123  Q
    ||||||||||||||||  |||||| |||||||| |||||||||||||||||||||    
T  46589202 ccctctaactcgtttta-tatttctcttttattaaaataagtgattttcacatct 46589255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 166 - 243
Target Start/End: Original strand, 47392262 - 47392338
Alignment:
Q  166 ttggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttca 243  Q
    |||||| |||||| ||||||||||| |||||||||||||| |||||||  |||| |||||| |||||| || ||||||    
T  47392262 ttggtttgttcgtcgtctttgtgcggcgttgtttgtcttt-ttgtttcgttcagatatttgttcggtttaggttttca 47392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 190
Target Start/End: Complemental strand, 34659723 - 34659596
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| ||||| |||  |||||||| ||||||||||||||||| | |||||||| || ||| ||  ||||||| ||| ||||||| ||  |||| || |    
T  34659723 aaatcacccctcgaacctgtttttctctttcccttttattgaaacaggtgatttttacgtctattttgttttttctttcgtgattttgttgtcttagtac 34659624  T
Q  162 gacattggttagttcgttgtctttgtgcg 190  Q
    ||| || ||| |||||| |||||||||||    
T  34659623 gacgtt-gtttgttcgtcgtctttgtgcg 34659596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Complemental strand, 48655037 - 48654953
Alignment:
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    ||||| |||||| |||||| |||||||| | ||||||||||||||| |||||||  ||| ||||||| |  ||||||||| ||||    
T  48655037 gcgacgttggtttgttcgtcgtctttgtacaacgttgtttgtctttattgtttcgttcatgtatttgtttagttcagattgtcat 48654953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 48655147 - 48655100
Alignment:
Q  75 aactcgtttttctatttcccttttattgaaataagtgattttcacatc 122  Q
    ||||| ||||| | |||||||||||||||||||||||| |||||||||    
T  48655147 aactcatttttatctttcccttttattgaaataagtgaatttcacatc 48655100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 30853857 - 30853815
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatct 123  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||    
T  30853857 tttttctctttccctttcattgaaataaatgattttcacatct 30853815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 13969705 - 13969609
Alignment:
Q  94 cttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcg 190  Q
    |||||||||||||||| ||| ||||||||| || ||||||||  ||  ||||||| || |||| ||||||| |||    |||||| |||||||||||    
T  13969705 cttttattgaaataagcgatcttcacatctatttcgtttttttcttcatgatttcatcgtcttagtgcgacgttgtgatgttcgtcgtctttgtgcg 13969609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 161
Target Start/End: Complemental strand, 27356827 - 27356756
Alignment:
Q  90 ttcccttttattgaaataagtgattttcacatc-tgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||| ||||||| ||||||||||||||||||||   ||| ||||||| ||| |||||||||||||||| ||||    
T  27356827 ttcctttttatttaaataagtgattttcacatcgaattaggtttttt-tttcgtgatttcgtcatcttagtgc 27356756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 3e-81; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 57 - 249
Target Start/End: Complemental strand, 26017757 - 26017565
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26017757 acctaaaatcacccctctaattcgtttttttatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcgtctt 26017658  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    |||||||  |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  26017657 cgtgcgatgttggtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattgtcatatcag 26017565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 5 - 239
Target Start/End: Complemental strand, 30992972 - 30992740
Alignment:
Q  5 gtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttattgaa 104  Q
    |||||| |||| |||||||||||||| |||||||||| ||| ||        ||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  30992972 gtcacttctttcttcttttcgtcggaggggtgatttaaggttaatttttg--acccaaaatcacccctctaacttgtttttctatttcccttttattgaa 30992875  T
Q  105 ataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctt 204  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| || |||||| |||||||||||||||||||||||||    
T  30992874 ataagtgattttcacatctgttacgttttttattttgtgattttgtcgtcttcgtgcgacgttgatttgttcgtcgtctttgtgcgacgttgtttgtctt 30992775  T
Q  205 tcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||||||||||||||||||||||||||    
T  30992774 tcttggttctctcaggtatttgatcggttcagatt 30992740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 47749753 - 47749931
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  47749753 aaaatcacccctctatctcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgttgtcttcgtg 47749852  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47749853 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 47749931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 40775286 - 40775464
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||| |||||||||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  40775286 aaaatcacccctataactcgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 40775385  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40775386 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 40775464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 43807303 - 43807067
Alignment:
Q  1 agccgtcactcctttattcttttcgtcggaagggtgatttagggtcaannnnnnnnacctaaaatcatccctctaactcgtttttctatttcccttttat 100  Q
    |||| |||||| ||| ||||||||||||||  ||||||||| ||||||        ||| ||||||| | |||||||||||||||||||||| |||||||    
T  43807303 agccatcactcttttcttcttttcgtcggagaggtgatttatggtcaatttttg--acccaaaatcacctctctaactcgtttttctatttctcttttat 43807206  T
Q  101 tgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttg 200  Q
    | |||||||  ||||||||||||||||||| |||||||||||||||||||| |||||||||||  |||||| ||||||  ||||||||||||||||||||    
T  43807205 taaaataagcaattttcacatctgttacgtattttattttgtgatttcgtcgtcttcgtgcgatgttggtttgttcgtcatctttgtgcgacgttgtttg 43807106  T
Q  201 tctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  43807105 tctttcttgtttctctcaggtgtttgatcggttcagatt 43807067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 7985907 - 7986089
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| || | |||| ||||||||||||||||||||||    
T  7985907 acctaaaaccatccctctaactcgtttttctctttcccttctattgaaataaatgattttcacatctatttcattttgtattttgtgatttcgtcatctt 7986006  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||| |||||| |||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  7986007 cgtgtgacgttggtttgttcgtcgtctttgtgtgacgttgtttgtttttcttgtttctctcaggtatttgatccgttcagatt 7986089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 24475362 - 24475538
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||  ||||    
T  24475362 aaaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtccacgtg 24475460  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  24475461 cgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 24475538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 49166942 - 49167122
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||| ||||||||||| ||||    
T  49166942 acctaaaatcacccctctaacttgtttttctatttcccttttattgaaataagtga-tttcacatctatttcgttttttatttcgtgatttcgtcgtctt 49167040  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||| |||||| |||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  49167041 cgtgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcccaggtatttgatcgcttcagatt 49167122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 25855315 - 25855140
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| || |||||||||||||||||||| ||| ||||||||    
T  25855315 aaaatcatccctctaactcgtttttctctttcccttttattgaaataagtgattttcatatctatttcgttttttattttgtgattttgtcgtcttcgtg 25855216  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    |||| |||||| |||||| |||||||||||||||| | ||| |||||  |||||||||||||||||||||||||||    
T  25855215 cgacgttggtttgttcgtcgtctttgtgcgacgttatatgtttttctattttctctcaggtatttgatcggttcag 25855140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 24470414 - 24470590
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| || ||  ||||    
T  24470414 aaaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcatcgtcaacgtg 24470512  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  24470513 cgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 24470590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 64 - 249
Target Start/End: Complemental strand, 8611714 - 8611531
Alignment:
Q  64 atcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcga 163  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||||||||||||||||||||| |||||||||||    
T  8611714 atcacccctctaactcgtttttctatttcccttttattgaaataagtgattt-cacatctattttgttttttattttgtgatttcgtcgtcttcgtgcga 8611616  T
Q  164 cattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    | |||||| ||| || |||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| |||| ||||    
T  8611615 cgttggtt-gttagtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtgtttgatcgcttcagattgtcatatcag 8611531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 42490721 - 42490898
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgatttt-cacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||| || |||| |||||||||||||||| || |||||||    
T  42490721 aaaatcacccctctaactcgtttttctttttcccttttatcgaaataagtgatttttcacatctatttcgttctttattttgtgatttcatcgtcttcgt 42490820  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcaga 237  Q
    | ||| |||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  42490821 gtgacgttggtttgttcgttgcctttgtgcgacattgtttgtttttcttgtttctctcaggtatttgatcggttcaga 42490898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 135229 - 135062
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||| ||||||| ||||||||||||||||||| ||||||||||||||| || | |||| ||||||||||||||||| |||||||||||| ||||||    
T  135229 tctaactcatttttctctttcccttttattgaaataggtgattttcacatctatttcattttgtattttgtgatttcgtcgtcttcgtgcgacgttggtt 135130  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||||| || ||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  135129 tgttcgtcgtttttgtgcgacgttgtttgattttcttgtttctcttaggtatttgatcggttcagatt 135062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 249
Target Start/End: Complemental strand, 13008760 - 13008580
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||||| |||||||| |||| |||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||| |||| ||||||| |||    
T  13008760 ccctctaactagtttttctctttctcttttattgaaataagtgattttcacatctattttgttttttattttgtgattttgtcgtcttagtgcgacgttg 13008661  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    ||| |||||| ||||||||||| ||||||||||||||||| ||||  ||||||||||| |||||||||||| |||| ||||    
T  13008660 gtttgttcgtcgtctttgtgcggcgttgtttgtctttcttatttcgttcaggtatttgttcggttcagattgtcatatcag 13008580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 74 - 239
Target Start/End: Original strand, 40476741 - 40476904
Alignment:
Q  74 taactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttag 173  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||||||| || |||||||||||||||||||||||| ||||||| | || |||||| |    
T  40476741 taactcgtttttctattttccttttattgaaataagttattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtacaacgttggtt-g 40476838  T
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||  ||||||||    
T  40476839 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcacttcagatt 40476904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 71 - 239
Target Start/End: Complemental strand, 23732478 - 23732310
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||||||||||||||| ||||  ||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||| |||||    
T  23732478 ctctaactcgtttttctctttctattttattgaaatatgtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttggt 23732379  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||||||  |||||||||| || |||||||||||||||||||  ||||||||||| ||||||||||||    
T  23732378 ttgttcgtcatctttgtgcgtcgctgtttgtctttcttgtttcgttcaggtatttggtcggttcagatt 23732310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 8319333 - 8319512
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| || | |||||||||||| || ||||| ||||||| ||||||||||||||||||| | ||  ||||||||||||||||||| ||| |||||||    
T  8319333 aaaatcacccatgtaactcgttttttctttttccattttattaaaataagtgattttcacatatatttagttttttattttgtgattttgtcgtcttcgt 8319432  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||| |||||| |||||| |||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||    
T  8319433 acgacgttggtttgttcgtcgtctttgtgcaaccttgtttgtctttcttgtttctctcaggcatttgatcggttcagatt 8319512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 28015375 - 28015554
Alignment:
Q  61 aaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || ||||  || ||||||||||||||| ||||  |    
T  28015375 aaaatcacccctctaacttgttttttctatttcccttttattgaaataagtgatttacacatctatttcgttcctttttttgtgatttcgtcgtcttaat 28015474  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| || |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||| ||||||||||||    
T  28015475 gcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttcggttcagatt 28015554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 71 - 239
Target Start/End: Original strand, 11001875 - 11002040
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||| ||||||||||||||||| |||||| |||||||||| |||||||||||| ||  |||||  |||||||||||||||| |||||||| ||| |||||    
T  11001875 ctcttactcgtttttctatttcgcttttaatgaaataagtaattttcacatctattttgtttt--attttgtgatttcgtcgtcttcgtgagacgttggt 11001972  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | |||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  11001973 t-gttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 11002040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 59 - 212
Target Start/End: Original strand, 43483611 - 43483770
Alignment:
Q  59 ctaaaatcatccctctaactcgtttt------tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtca 152  Q
    |||||||||||||||||||| |||||      ||||||||||||||||||||||||||||||||||||||| || |||||||  ||||||||||||| |     
T  43483611 ctaaaatcatccctctaacttgtttttttttttctatttcccttttattgaaataagtgattttcacatctatttcgtttttgcttttgtgatttcgccg 43483710  T
Q  153 tcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    |||| ||||||| ||| || |||||| |||||||||||||||||||||||||||||||||    
T  43483711 tcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttt 43483770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 9933865 - 9934028
Alignment:
Q  60 taaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||| |||||||||| || ||||||||||||||||||| |||||||||||||| |||||| || |||||||| ||||||||||||| | |||| ||    
T  9933865 taaaatcacccctctaactagtatttctatttcccttttattaaaataagtgatttttacatctatttcgttttttcttttgtgatttcgccgtcttagt 9933964  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 226  Q
    ||||| ||| || |||||| |||||||||||||   ||||||||||||||||||  |||||||||||    
T  9933965 gcgacgttgttttgttcgtcgtctttgtgcgac---gtttgtctttcttgtttcgttcaggtatttg 9934028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 44681477 - 44681631
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || |||| |||||||| ||||||| |||     
T  44681477 acctaaaatca-ccctctaactcgtttttctttttcccttttattgaaataagtgattttcacatctatttcg-ttttgattttgtggtttcgtcgtctc 44681574  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
     ||| ||| |||||| |||||| || |||||| ||||||||||||||||||||||||    
T  44681575 agtgtgacgttggtttgttcgtcgtttttgtgggacgttgtttgtctttcttgtttc 44681631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 46918429 - 46918596
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||| ||||||||||| || ||||||||| |||||||||| |||||||||||||| ||  |||||||||||||||||||||||||||| |||| ||||||    
T  46918429 ccctttaactcgtttt-ctctttcccttt-attgaaataaatgattttcacatctattttgttttttattttgtgatttcgtcatctttgtgcaacattg 46918526  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| ||| || |||||||||||  |||||||||| ||||||||||  ||||| ||||| ||||||||||||    
T  46918527 gtttgtttgtcgtctttgtgcggtgttgtttgtcattcttgtttcgttcagg-atttgttcggttcagatt 46918596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 201
Target Start/End: Original strand, 47156415 - 47156550
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||| || ||  |||||||||||||||||||| ||||||||    
T  47156415 aaaatcatccctctaactcgttt--ctattttccttttattgaaataagtgattttcacatctatttcg--ttttattttgtgatttcgtcgtcttcgtg 47156510  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgt 201  Q
     ||| |||||| |||||| |||||||||| |||||||||||    
T  47156511 tgacgttggtt-gttcgtcgtctttgtgcaacgttgtttgt 47156550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 5025151 - 5024973
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| ||||||||||  ||||| |||||||||||||||||||||| ||||||| ||| ||| || ||||| || ||||||||||||||| |||| ||    
T  5025151 aaaatcacccctctaacttattttttctatttcccttttattgaaata-gtgatttacacgtctatttcgtttctttttttgtgatttcgtcgtcttagt 5025053  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| || |||||| ||||||||||||||||||||  ||||||| ||||  | ||||||||| ||||||||||||    
T  5025052 gcgaccttgttttgttcgtcgtctttgtgcgacgttgttttcctttcttatttcatttaggtatttgttcggttcagatt 5024973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 22751457 - 22751635
Alignment:
Q  60 taaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||| || ||||||||||||| |||||||||||||||| |||||||||||||||| ||  ||| ||||||||||||||| |||| ||| || | ||    
T  22751457 taaaatcacccttctaactcgttttactatttcccttttattaaaataagtgattttcatattagtttcgttttttattttgtaattttgtcgtcgtagt 22751556  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || || |||||| |||||| |||||| |||| ||||||||| ||||||||||||  |||  |||||| || |||||||||    
T  22751557 gc-acgttggtttgttcgtcgtctttatgcggcgttgtttgcctttcttgtttcgttcaactatttgttcagttcagatt 22751635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 39090134 - 39090238
Alignment:
Q  61 aaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||| || | |||||| |||||||||||||||||||| ||    
T  39090134 aaaatcacctctctaactcgttttttctatttcccttttattgaaataagtgattttcacatctatttcattttttcttttgtgatttcgtcatctttgt 39090233  T
Q  160 gcgac 164  Q
    |||||    
T  39090234 gcgac 39090238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 10250576 - 10250400
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| || |||||||| ||| ||||||||| | ||   |||    
T  10250576 aaaatcacccctctaattcgtttttctaattcctttttattgaaataagtgattttcacatctatttcgttttttctttcgtgatttcgccgtc--ggtg 10250479  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||| ||| || |||||| ||||||||| | |||||||||||||| || ||||  ||||| ||||| || |||||||||    
T  10250478 tgacgttgttttgttcgtcgtctttgtgtggcgttgtttgtcttttttatttcgttcaggaatttgttccgttcagatt 10250400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 57 - 164
Target Start/End: Original strand, 37399641 - 37399748
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||   |||||||||||| ||||||||| ||||    
T  37399641 acctaaaatcacccctctaactcgtttttctctttcccttttattgaaataaatgattttcacatctattttattttttattttgagatttcgtcgtctt 37399740  T
Q  157 cgtgcgac 164  Q
     |||||||    
T  37399741 tgtgcgac 37399748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 23177676 - 23177504
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  ||||||||| |||||||| ||| ||||| ||||||||||||||||||||||||| || ||||||  |||||||||||||  | |||| |||    
T  23177676 aaaatcactcctctaactagtttttctcttttccttt-attgaaataagtgattttcacatctatttcgttttc-attttgtgatttctccgtcttagtg 23177579  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||| ||||||  ||||| ||||||||||| |||||| ||||||||||||||   ||||||||||| | ||||||    
T  23177578 cgaccttggttttttcgtcgtctttgtgcggcgttgtctgtctttcttgttttgttcaggtatttgtttggttca 23177504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 15124076 - 15123923
Alignment:
Q  61 aaaatcatccctctaactc-gtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| ||||||||||  |||||| | ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| || || | ||    
T  15124076 aaaatcacccctctaactaagtttttatctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcatcgtcatagt 15123977  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
       || |||||| |||| | || ||||||| |||||||||||||||||||||||    
T  15123976 ataacgttggtttgttcttcgtatttgtgcaacgttgtttgtctttcttgtttc 15123923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 226
Target Start/End: Complemental strand, 38649432 - 38649287
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||||||| ||||||||||||||||||||||| ||||||| || ||||| || ||||||||| ||||| |||| ||| ||| ||| || ||| || |    
T  38649432 tttttctattttccttttattgaaataagtgatttacacatctatttcgtttctttttttgtgatctcgtcgtcttagtgagaccttgttttgtttgtcg 38649333  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 226  Q
    |||||||||||||||||||| ||||||| ||||  ||| |||||||    
T  38649332 tctttgtgcgacgttgtttgcctttcttttttcgttcaagtatttg 38649287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 14707600 - 14707776
Alignment:
Q  60 taaaatcatccctctaactcgtttttctatttccctttt-attgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcg 158  Q
    ||||||||||  | ||| |||||||| | |||||||||| |||||||||| ||| ||| |||||| || | ||||||||||||||||||||||||||| |    
T  14707600 taaaatcatcgttgtaattcgtttttttctttccctttttattgaaataattgaatttaacatctatttcattttttattttgtgatttcgtcatcttag 14707699  T
Q  159 tgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    || | | |||||| ||| || || |||||||| ||||||||||||||||||||||  | ||||||||| ||| ||||    
T  14707700 tgtggcgttggtttgttagtcgtttttgtgcggcgttgtttgtctttcttgtttcatttaggtatttgttcgattca 14707776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 71 - 171
Target Start/End: Original strand, 35661553 - 35661653
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||| ||   |||||||||||||||||||||| |||||||||||| |||||    
T  35661553 ctctaactcgtttttccttttcccttttattgaaataagtgatcttcacatctattttattttttattttgtgatttcgtcgtcttcgtgcgacgttggt 35661652  T
Q  171 t 171  Q
    |    
T  35661653 t 35661653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 772497 - 772640
Alignment:
Q  96 tttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgtt 195  Q
    |||||||| ||||||||||||| | ||| ||  ||||||| ||| ||||||||||| |||| ||||||| ||| || ||  || ||||||||||||  ||    
T  772497 tttattgatataagtgattttcgcttctatttagttttttctttcgtgatttcgtcgtcttagtgcgacgttgttttgtctgtcgtctttgtgcgatatt 772596  T
Q  196 gtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||||||||  ||||||||||| ||||||||||||    
T  772597 gtttgtctttcttgtttcgttcaggtatttgttcggttcagatt 772640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 35141814 - 35141685
Alignment:
Q  93 ccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgac 192  Q
    ||||||||||||||||||||||||||||||| || | ||||||||||||||||| |||| |||| ||||||| || |||  || ||  ||||| || | |    
T  35141814 ccttttattgaaataagtgattttcacatctatttcattttttattttgtgattccgtcgtcttagtgcgacgttagtttttttgtaatctttatgtggc 35141715  T
Q  193 gttgtttgtctttcttgtttctctcaggta 222  Q
    |||||||||||||| ||||||  |||||||    
T  35141714 gttgtttgtctttcctgtttcgttcaggta 35141685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 19895735 - 19895651
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    |||||||| ||||||  ||||||||||||||||||||||||||||| ||||| ||  ||||||||||||||||||||||| ||||    
T  19895735 tctaactcatttttccttttcccttttattgaaataagtgattttcgcatctattttgttttttattttgtgatttcgtcgtctt 19895651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 62 - 199
Target Start/End: Complemental strand, 29804770 - 29804632
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatc-tgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||| |||||||| ||||||||||  ||||||| |||| ||||||||||||||||||||   ||| ||||||  ||||||||||||||| || | |||    
T  29804770 aaatcacccctctaaatcgtttttctccttcccttctatttaaataagtgattttcacatcgaattaggtttttccttttgtgatttcgtcgtcatagtg 29804671  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgttt 199  Q
    ||||  || || ||| || ||||||||||||||||||||    
T  29804670 cgacgctgttttgtttgtcgtctttgtgcgacgttgttt 29804632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 39090227 - 39090295
Alignment:
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    |||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||| ||||    
T  39090227 tctttgtgcgacgttgtttgtctttcttgtttcgttcaggtatttgttcggttcagattgtcatatcag 39090295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 21552549 - 21552406
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| | |||||| ||||||||||  ||| |||||||| |||||| ||||||||||||| | |  | ||||| ||| ||||||||||| |||| ||||    
T  21552549 aaatcacctctctaaatcgtttttctccttctcttttatttaaataaatgattttcacatcggattaggtttttctttcgtgatttcgtcgtcttagtgc 21552450  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    ||| ||| || ||| || |||||| || ||||||||||||||||    
T  21552449 gacgttgtttcgtttgtcgtctttatgtgacgttgtttgtcttt 21552406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 33530555 - 33530433
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    ||||||||| ||||||||| ||||  |||||||||||||||||||||| |||||| || |||||| | ||| ||||||| ||| |||| || |||| |||    
T  33530555 ccctctaacccgtttttctttttcttttttattgaaataagtgatttttacatctatttcgttttctctttcgtgattttgtcgtcttagtacgacgttg 33530456  T
Q  169 gttagttcgttgtctttgtgcga 191  Q
      | |||||| ||||||||||||    
T  33530455 tgttgttcgtcgtctttgtgcga 33530433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 14734144 - 14734000
Alignment:
Q  62 aaatcatccctctaactcgtttttc-tatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||| ||||||||  |||||||| |  ||||||| |||| ||||||||||||||||| ||   |  | ||||  ||||||||||||||| |||| |||    
T  14734144 aaatcacccctctaaaacgtttttcctcattcccttctatttaaataagtgattttcacgtcgaattaggttttccttttgtgatttcgtcgtcttagtg 14734045  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    |||| ||| || ||| || ||||||||||||||||||||||||||    
T  14734044 cgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcttt 14734000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 19895647 - 19895591
Alignment:
Q  193 gttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||    
T  19895647 gttgtttgtttttcttgtttctctcaggtatttgatcggttcagattgtcatatcag 19895591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 16263406 - 16263544
Alignment:
Q  61 aaaatcatccctctaactcgtttttc-tatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| | |||||||| ||||||| |||||| |||||||||||||||||| ||| ||||| | || ||||| || | ||||||||||||| | || ||    
T  16263406 aaaatcacctctctaacttgtttttcctatttctcttttattgaaataagtgttttacacat-tatttcgtttcttttgttgtgatttcgtcgtgttagt 16263504  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgttt 199  Q
    ||||| ||| || |||||| ||| |||||||||| |||||    
T  16263505 gcgaccttgttttgttcgtcgtccttgtgcgacgatgttt 16263544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 21329390 - 21329247
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| |||||||| ||||||| ||  ||||||| |||| ||||||||||||||||||||   |  | ||||| ||||||||||||||| |||| |||     
T  21329390 aaatcacccctctaaatcgttttcctcattcccttctatttaaataagtgattttcacatcgaattaggtttttcttttgtgatttcgtcttcttagtgt 21329291  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    |||  || || ||| || | |||||||||| |||||||||||||    
T  21329290 gaccctgttttgtttgtcgactttgtgcgatgttgtttgtcttt 21329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 72 - 147
Target Start/End: Complemental strand, 35135267 - 35135192
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgattt 147  Q
    |||| ||||||||| | ||||| ||||||||||||| ||||||||||||||| || |||||||||| |||||||||    
T  35135267 tctagctcgtttttatctttcctttttattgaaatacgtgattttcacatctatttcgttttttatattgtgattt 35135192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 37399730 - 37399784
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgat 228  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  37399730 ttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctttcaagtatttgat 37399784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 164
Target Start/End: Complemental strand, 41748574 - 41748491
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    ||||||||||| ||||||||| ||||| ||||||||||||||| || |||||||  ||| ||||||||| | |||| |||||||    
T  41748574 tttttctattttccttttattaaaataggtgattttcacatctatttcgtttttgctttcgtgatttcgccgtcttagtgcgac 41748491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 32312618 - 32312732
Alignment:
Q  93 ccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgac 192  Q
    ||||||||| |||||||||||||| | || | ||  | ||||| |||||||||||| || |||| |||| || ||| || |||||| |||||||||| |     
T  32312618 ccttttatttaaataagtgatttttaaatatatttaggtttttcttttgtgatttcttcgtcttagtgcaacgttgttttgttcgtcgtctttgtgcaat 32312717  T
Q  193 gttgtttgtctttct 207  Q
    |||||| ||||||||    
T  32312718 gttgttagtctttct 32312732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 164
Target Start/End: Original strand, 1685007 - 1685075
Alignment:
Q  95 ttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    ||||||| ||||||||||||||| | ||| ||  ||||||||||||||| |||||||||||| |||||||    
T  1685007 ttttatttaaataagtgattttc-cgtctatttagttttttattttgtgctttcgtcatcttagtgcgac 1685075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 24045263 - 24045197
Alignment:
Q  173 gttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| ||||||||| | | |||||||| ||||||||||  |||| ||||||||||| ||||||||    
T  24045263 gttcgtcgtctttgtgtggcattgtttgtatttcttgttttgctcatgtatttgatcgattcagatt 24045197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 41748503 - 41748445
Alignment:
Q  180 gtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagat 238  Q
    ||||| |||||||||||||||||||||||||||   |  |||||||| |||||||||||    
T  41748503 gtcttagtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagat 41748445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 1e-77; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 4727023 - 4726845
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||    
T  4727023 aaaatcatccatataactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacatttcttattttgtgatttcgtcgtcttcgtg 4726924  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4726923 cgatgttggttagttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 4726845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 5378322 - 5378499
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||| |||||||||    
T  5378322 aaatcacccctctaactcgtttttctatttcccttttattgaaataagtgattttcatatttgttgcattttttattttgtgatttcgtcgtcttcgtgc 5378421  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || ||||||| |||||| ||||||||||||| ||| |||||||||||||||||||||| | |||||||||||||||||    
T  5378422 gaaattggtttgttcgtcgtctttgtgcgacattgcttgtctttcttgtttctctcagatgtttgatcggttcagatt 5378499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 6887273 - 6887095
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||| ||||||||    
T  6887273 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttcttttgtgatttcgtcgtcttcgtg 6887174  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  6887173 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgcttctctcaggtatttgatcagttcagatt 6887095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 31645848 - 31646026
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||| || ||||||||    
T  31645848 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcttcgtcttcgtg 31645947  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||||||| |||||||||    
T  31645948 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgttttccttgtttctctcaggtatttgatcagttcagatt 31646026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 28618623 - 28618799
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  28618623 aaaatcacccctctaactcgtttttctatttcccttttattgaaataagtga-tttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 28618721  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||| | |||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||||    
T  28618722 cgacgttggtt-gttcatcgtctttgtgcgacgttatttgtttttcttgtttctctcaggtatttgatcgctttagatt 28618799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 4070573 - 4070748
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||| | || ||||||  |||||||||||||||| | ||||||    
T  4070573 aaaatcacccctctgactcgtttttctatttcctttttattgaaataagtgattttcacatttatttcgtttt--attttgtgatttcgtcgtattcgtg 4070670  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  4070671 cgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgtttcagatt 4070748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 61 - 235
Target Start/End: Complemental strand, 29310444 - 29310275
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||| ||||||||    
T  29310444 aaaatcacccctctaacttgttttttcttttcccttttattgaaataagtgattttcacatctgtt-----ttttattttgtgatttcgtcgtcttcgtg 29310350  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  29310349 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttca 29310275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 32390731 - 32390568
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| || ||||||| ||||||    
T  32390731 tctaactcgtttttctctttcctttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcatattagtgcgacgttggtt 32390632  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
     ||| |||||||||||||| ||||||||||||||||||||||  || |||||||| ||||||||    
T  32390631 cgtttgttgtctttgtgcggcgttgtttgtctttcttgtttcattcgggtatttgttcggttca 32390568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 15710561 - 15710734
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| |||  |||||| |||||||| |||    
T  15710561 aaaatcacccctctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttctttcatgattttgtcatcttagtg 15710660  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttc 234  Q
    |||| ||| || |||||||||||||||| | ||||||||||||||||||||||  ||||||||||| |||||||    
T  15710661 cgacgttgtttcgttcgttgtctttgtgtggcgttgtttgtctttcttgtttcgttcaggtatttgttcggttc 15710734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 2415419 - 2415597
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || ||||||| |||||||| |||||||||||||||||||||||||||||| || | || | |||||||||||||||||| ||| ||||| ||    
T  2415419 aaaatcacccttctaacttgtttttctttttcccttttattgaaataagtgattttcatatatatttcattttttattttgtgattttgtcgtcttcatg 2415518  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||||||||||||||||| |||||||||||| ||||| || ||||||||||| ||||||||||||    
T  2415519 cgacgttggtttgttcgttgtctttgtgcgacattgtttgtcttttttgttactttcaggtatttgttcggttcagatt 2415597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 33486665 - 33486486
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| || ||||||| |||||| |||||||||||||||||||||||||||||| ||||||| || ||||| || ||||||||||||||| |||| ||    
T  33486665 aaaatcacccatctaacttgttttttctatttcccttttattgaaataagtgatttacacatctatttcgtttctttttttgtgatttcgtcgtcttagt 33486566  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| || |||||| ||||||||||||||||||||||||||||||||||  ||| ||||||| ||||||||||||    
T  33486565 gcgaccttgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttcgttcaagtatttgttcggttcagatt 33486486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 9035043 - 9034859
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt------attttgtgatttcgtcatc 154  Q
    ||||||||||||||||||||||||||| ||||| ||||||| ||||||||||  ||||||||| || | ||||||      ||||||||||||| || ||    
T  9035043 aaaatcatccctctaactcgtttttctctttccattttattaaaataagtgacattcacatctatttcattttttttttttattttgtgatttcatcgtc 9034944  T
Q  155 ttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||| |||||| |||| | ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  9034943 ttcgtgcgacgttggtttgttcctcgtctttgtgcgacattgtctgtctttcttgtttctctcaggtatttgatcggttcagatt 9034859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 41063480 - 41063313
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| ||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |||||||  ||| ||||||    
T  41063480 tctaactcgtttttctctttccattttattgaaataaatgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtatgacgttggtt 41063381  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||| || | ||||| |||||||||||||| |||||| |||||||| | |||||||||||||||||||    
T  41063380 tgtttgtcggctttgagcgacgttgtttgtttttcttatttctctcggctatttgatcggttcagatt 41063313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 41554505 - 41554684
Alignment:
Q  61 aaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| || ||||| || | | ||||||||||| |||| ||    
T  41554505 aaaatcacccctctaacttgttttttctatttcccttttattgaaataagtgatttacacatctatttcgtttcttttgtagtgatttcgtcgtcttagt 41554604  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| ||  ||||| ||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  41554605 gcgaccttgttttattcgtcgtccttgtgcgacgttgtttgtctttcttgtttcgctcaggtatttgttcggttcagatt 41554684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 101 - 235
Target Start/End: Complemental strand, 10924188 - 10924055
Alignment:
Q  101 tgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttg 200  Q
    |||||||||||||||| |||||| || |||||||||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||| |||    
T  10924188 tgaaataagtgatttttacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgacgttg-ttg 10924090  T
Q  201 tctttcttgtttctctcaggtatttgatcggttca 235  Q
    | ||||||||||||||||| |||||||||||||||    
T  10924089 tttttcttgtttctctcagatatttgatcggttca 10924055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 19646136 - 19645958
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||  || |||| |||    
T  19646136 aaaatcacccctctaactcatttttctctttcccttttaatgaaataagtgattttcacatctatttcgttttttattttgtgattttatcgtctttgtg 19646037  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    || | |  ||| ||| || ||||||||| ||||||||||||||||||||||||| | | ||||||| | | ||||||||    
T  19646036 cggcgtcagtttgtttgtcgtctttgtgtgacgttgtttgtctttcttgtttctttgaagtatttgttagattcagatt 19645958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 41358066 - 41358236
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    ||||||||||||||||||| ||| |||||||||||||||||| |||||||||||| || | ||||||  || ||||||| ||| |||| |||||||||||    
T  41358066 ccctctaactcgtttttctcttttccttttattgaaataagttattttcacatctatttcattttttccttcgtgattttgtcgtcttagtgcgacattg 41358165  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     || |||||| || |||||||| |||||||||||||||||||||   | ||||||||| ||||||||||||    
T  41358166 ttttgttcgtcgtgtttgtgcggcgttgtttgtctttcttgttttaattaggtatttgttcggttcagatt 41358236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 22397643 - 22397465
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||||  |||||||||||||| |||||| ||||| ||| |||||||| |||||||||||| || || ||||| ||||||||||||||| |||| ||    
T  22397643 aaaatcatcaatctaactcgttttttctattttccttt-attaaaataagtaattttcacatctatttcggtttttcttttgtgatttcgtcgtcttagt 22397545  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| || |||||| ||||||||||||| ||||||||||||||| ||||  ||||||||||| ||| ||||||||    
T  22397544 gcgacgttgttttgttcgtcgtctttgtgcgacattgtttgtctttcttatttcgttcaggtatttgttcgattcagatt 22397465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 18472820 - 18472643
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||||| |||||| |||||| |||||||||| |||||||||||| ||||||| ||  |||| || ||||||||||||||| |||| ||    
T  18472820 aaaatcacccctctaacttgttttttctattttccttttattgcaataagtgatttacacatctattttgtttctt-ttttgtgatttcgtcgtcttagt 18472722  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||| ||| || |||| | ||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||||    
T  18472721 gtgactttgttt-gttcctcgtctttgtgcgacgttgtttgtctttcttgtttcattcaggtatttgttcgattcagatt 18472643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 8812247 - 8812069
Alignment:
Q  61 aaaatcatccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||||  |||||| |||||||| |||||||||| ||||||||||||| |||| || |||||||  ||| ||||||||| | |||| ||    
T  8812247 aaaatcacccctctaacatgttttttctatttcctttttattgaagtaagtgattttcatatctatttcgtttttgctttcgtgatttcgccgtcttagt 8812148  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||| || |||||| ||||||||| || ||||||||||||||||||||   || |||||||| ||||||||||||    
T  8812147 gcgacgttgttttgttcgtcgtctttgtggga-gttgtttgtctttcttgttttgttcgggtatttgttcggttcagatt 8812069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 59 - 244
Target Start/End: Original strand, 34866444 - 34866629
Alignment:
Q  59 ctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcg 158  Q
    ||||||||||  ||||||||||||||||| |||| |||||||||||||||| || ||||| |||| || |||||||| ||| ||||||||||| |||| |    
T  34866444 ctaaaatcatgtctctaactcgtttttctctttctcttttattgaaataagcgagtttcatatctatttcgttttttctttcgtgatttcgtcgtcttag 34866543  T
Q  159 tgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    |||||| ||  || |||||| |||||||| || ||| |||| |||||||| ||||  |||| |||||| ||| |||| ||| ||||    
T  34866544 tgcgacgttattttgttcgtcgtctttgtacggcgtagtttatctttcttttttcattcagatatttgttcgattcaaattgtcat 34866629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 6648008 - 6647830
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttc-acatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||  |||||||||||||||||  ||||||||||||||||||||||||||||  |||| | || |||||||| ||| ||||||||||| |||| ||    
T  6648008 aaaatcactcctctaactcgtttttcgctttcccttttattgaaataagtgattttttacat-tatttcgttttttctttcgtgatttcgtcgtcttagt 6647910  T
Q  160 gcgac-attggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| ||  | || ||||| ||||||||||| |||||||||||||||||||||   |||| |||||| ||||||||||||    
T  6647909 gcgacgatgtgcta-ttcgtcgtctttgtgcggcgttgtttgtctttcttgttttattcagctatttgttcggttcagatt 6647830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 168
Target Start/End: Original strand, 28500736 - 28500843
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  ||| |||||| ||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| || |||| |||    
T  28500736 aaaatcactcctttaactcttttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcttcgtcttagtg 28500835  T
Q  161 cgacattg 168  Q
    || |||||    
T  28500836 cggcattg 28500843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 249
Target Start/End: Original strand, 13007723 - 13007898
Alignment:
Q  80 gtttttctatttcccttttattgaaataagtgattt-------tcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtta 172  Q
    |||||||| |||||||||||||||||||||||||||       |||||||| || | |||||| ||| ||||||||||| |||| |||| || ||| ||     
T  13007723 gtttttctctttcccttttattgaaataagtgattttcaattttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttgtttt 13007822  T
Q  173 gttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
     ||||| |||||||||||||||||||||||||||||| ||| |||||||||||| |||| ||| ||| |||| ||||    
T  13007823 attcgtcgtctttgtgcgacgttgtttgtctttcttg-ttcgctcaggtatttgttcggatcaaattatcatatcag 13007898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 81 - 239
Target Start/End: Original strand, 34843955 - 34844113
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    |||| |||||||||||||||||||||||| ||||||||||||| ||  ||||||| ||||||||||| ||| || | ||||||| ||| |  ||| ||      
T  34843955 ttttcctatttcccttttattgaaataagcgattttcacatctattttgttttttcttttgtgattttgtcgtcctagtgcgactttgttatgtttgtca 34844054  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| | ||||||||||||||||| |||||||  ||||||||||| ||| ||||||||    
T  34844055 tctttatacgacgttgtttgtcttttttgtttcgttcaggtatttgctcgattcagatt 34844113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 130 - 239
Target Start/End: Original strand, 20270802 - 20270911
Alignment:
Q  130 ttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatc 229  Q
    |||||| | ||||||||||||| |||| ||||||| ||| || |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||| ||    
T  20270802 ttttttttgttgtgatttcgtcgtcttagtgcgacgttgttttgttcgtcgtctttgtgcgacgttgtttgcctttcttgtttcgttcaggtatttgttc 20270901  T
Q  230 ggttcagatt 239  Q
    ||||||||||    
T  20270902 ggttcagatt 20270911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 199
Target Start/End: Original strand, 37425012 - 37425153
Alignment:
Q  61 aaaatcatccctctaactcgtttt---tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttc 157  Q
    |||||||  |||||||||||||||   | ||||||||||||||||||||||||||||||||||||| |   ||||||| ||| ||||||| ||| ||||     
T  37425012 aaaatcacgcctctaactcgttttatatatatttcccttttattgaaataagtgattttcacatctatgttgttttttctttcgtgattttgtcgtcttt 37425111  T
Q  158 gtgcgacattggttagttcgttgtctttgtgcgacgttgttt 199  Q
    ||||||| ||| || ||| || ||||||||||||||||||||    
T  37425112 gtgcgacgttgttttgtttgtcgtctttgtgcgacgttgttt 37425153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 249
Target Start/End: Original strand, 13079173 - 13079351
Alignment:
Q  77 ctcgtttttctatttcccttttattgaaataagtgattt-------tcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattgg 169  Q
    ||||||||||| |||||||||||||||||||||||||||       |||||||| || | |||||| ||| ||||||||||| |||| |||| || |||     
T  13079173 ctcgtttttctctttcccttttattgaaataagtgattttcaattttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttgt 13079272  T
Q  170 ttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    ||  ||||| ||||||||||||| |||||||||||||||| |||  ||||||||||| |||| ||| ||| |||| ||||    
T  13079273 tttattcgtcgtctttgtgcgacattgtttgtctttcttg-ttcgttcaggtatttgttcggatcaaattatcatatcag 13079351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 61 - 225
Target Start/End: Original strand, 34873880 - 34874044
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || |||||||||||||||  |||||||||||||||||||||||| ||  |||||| || | | |||| ||| ||||||||||| ||||  ||    
T  34873880 aaaatcacccttctaactcgtttttcagtttcccttttattgaaataagtgagttatacatctatttcatcttttctttcgtgatttcgtcgtcttaatg 34873979  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtattt 225  Q
    |||  ||| ||  |||||  |||||||| | ||||||||||||||||||||||| |||| |||||    
T  34873980 cgatgttgttttattcgtcatctttgtgtggcgttgtttgtctttcttgtttctttcagatattt 34874044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 174 - 239
Target Start/End: Original strand, 35906401 - 35906466
Alignment:
Q  174 ttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  35906401 ttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 35906466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 205
Target Start/End: Complemental strand, 6074823 - 6074687
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||| ||||||||||  |||||||||||| ||||||||||||||||||||   |  | ||||| || |||||||||||| |||| |||| ||| ||    
T  6074823 ccctctaaatcgtttttctccttcccttttatttaaataagtgattttcacatcgaattaggtttttcttctgtgatttcgtcgtcttagtgcaacactg 6074724  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
     || ||| || ||||||||||||| ||||||||||||    
T  6074723 ttttgtttgtcgtctttgtgcgaccttgtttgtcttt 6074687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 185
Target Start/End: Complemental strand, 28423870 - 28423774
Alignment:
Q  89 tttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtcttt 185  Q
    |||||||||||||||||||| ||||||| | |||| || |||||||||||||||||||||||| || || || |||||||||| |||||| ||||||    
T  28423870 tttcccttttattgaaataaatgatttttatatctatttcgttttttattttgtgatttcgtcgtcatcttgtgacattggtttgttcgtcgtcttt 28423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 34894011 - 34893908
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||| | || ||||||||||||| ||||||| |||| || | |||||||||||||||||| ||| |||| |||    
T  34894011 aaaatcacccctctaactcgtttttctcttttctttatattgaaataagtaattttcatatctatttcattttttattttgtgattttgtcgtctttgtg 34893912  T
Q  161 cgac 164  Q
    ||||    
T  34893911 cgac 34893908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 96 - 239
Target Start/End: Original strand, 40774812 - 40774958
Alignment:
Q  96 tttattgaaataagtgattttcacatctgttacgttttttatttt--gtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacg 193  Q
    ||||||||||||||||||||||| ||||  |  ||||||| ||||  ||||||| ||| |||| ||||||| ||| || || ||| |||||||||| ||     
T  40774812 tttattgaaataagtgattttcatatctactttgttttttttttttcgtgattttgtcgtcttagtgcgacgttgttttgtccgtcgtctttgtgcaacc 40774911  T
Q  194 ttgt-ttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||||||||||||||||  ||||||||||| ||||||||||||    
T  40774912 ttgtattgtctttcttgtttcgttcaggtatttgttcggttcagatt 40774958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 249
Target Start/End: Original strand, 13080184 - 13080361
Alignment:
Q  80 gtttttctatttcccttttattgaaataagtgattttca-------catctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtta 172  Q
    |||||||| ||| ||||||||||||||||||||||||||       ||||| || | |||||| ||| ||||||||||| |||| |||| || ||| ||     
T  13080184 gtttttctcttttccttttattgaaataagtgattttcaattttcacatctatttctttttttctttcgtgatttcgtcgtcttagtgcaacgttgtttt 13080283  T
Q  173 gttcgttgtctttgtg--cgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
     ||||| |||||||||  ||||||||||||||||||||| |||  ||||||||||| |||| ||| ||| |||| ||||    
T  13080284 attcgtcgtctttgtgtgcgacgttgtttgtctttcttg-ttcgttcaggtatttgttcggatcaaattatcatatcag 13080361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 14910739 - 14910593
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||||||||||||||||||||||||||||||||||||||            |||||||||||||| || |||| || |||||||| || |||||  |    
T  14910739 tttttctatttcccttttattgaaataagtgattttcacatc------------tattttgtgatttcatcgtcttagtacgacattgttttgttcgccg 14910652  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||||||  || ||||||||||||||||||||  ||| ||||||| ||| || |||||    
T  14910651 tatttgtgtaacattgtttgtctttcttgtttcgttcatgtatttgttcgttttagatt 14910593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 34893920 - 34893865
Alignment:
Q  180 gtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  34893920 gtctttgtgcgacgttgtttgtttttcttgtttccctcagctatttgatcggttca 34893865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 35906344 - 35906419
Alignment:
Q  89 tttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    ||||||||||||||||||||||||||||||| ||  ||  |||||||||||||| |||||||| |||| |||||||    
T  35906344 tttcccttttattgaaataagtgattttcacgtcaattttgttttttattttgtaatttcgtcgtctttgtgcgac 35906419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 40565249 - 40565106
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| | |||||| ||||||||||  |||| || |||| |||||||||||||||||||    |  | ||||  ||||||||||||||| |||| ||||    
T  40565249 aaatcacctctctaaatcgtttttctccttcctttctatttaaataagtgattttcacattgaattaggttttccttttgtgatttcgtcgtcttagtgc 40565150  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    |||  || || ||| || ||||||||||||||||||||||||||    
T  40565149 gaccatgttttgtttgtcgtctttgtgcgacgttgtttgtcttt 40565106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 116
Target Start/End: Original strand, 41988211 - 41988258
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgatttt 116  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  41988211 ccctctaactcgtttttctctttcccttttgttgaaataagtgatttt 41988258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 123
Target Start/End: Original strand, 29154274 - 29154335
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatct 123  Q
    ||||||| |||||||||| |||||| | |||| ||||||||||||||||||||||||||||||    
T  29154274 aaaatcacccctctaacttgttttt-tctttctcttttattgaaataagtgattttcacatct 29154335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 239
Target Start/End: Original strand, 37425135 - 37425221
Alignment:
Q  153 tcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||||||| ||| || ||| || ||||||||||||||||||||||| ||||||||||   |||||||||| || ||| |||||    
T  37425135 tctttgtgcgacgttgttttgtttgtcgtctttgtgcgacgttgtttgtcattcttgtttcgtacaggtatttgttcagtttagatt 37425221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 17326271 - 17326211
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatc 122  Q
    |||||| |||||||| ||||||||||  || |||| |||| ||||||||||||||||||||    
T  17326271 aaatcacccctctaaatcgtttttctccttgccttctatttaaataagtgattttcacatc 17326211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 12524709 - 12524655
Alignment:
Q  69 ccctctaactcgtttttctatttccctttt-attgaaataagtgattttcacatc 122  Q
    |||||||| ||||||||||  ||||||||| ||| ||||||||||||||||||||    
T  12524709 ccctctaaatcgtttttctccttccctttttatttaaataagtgattttcacatc 12524655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 14211170 - 14211238
Alignment:
Q  131 tttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttg 200  Q
    ||||||||| ||||||||||| |||| |||||||||||  | |||||| ||| ||||||| |||||||||    
T  14211170 tttttatttcgtgatttcgtcgtcttagtgcgacattgtgttgttcgtcgtc-ttgtgcggcgttgtttg 14211238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 205
Target Start/End: Original strand, 8957341 - 8957369
Alignment:
Q  177 gttgtctttgtgcgacgttgtttgtcttt 205  Q
    |||||||||||||||||||||||||||||    
T  8957341 gttgtctttgtgcgacgttgtttgtcttt 8957369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 28500827 - 28500891
Alignment:
Q  180 gtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    ||||| ||||| | ||||||||||||||| ||||  || |||||||| |||||||||||| ||||    
T  28500827 gtcttagtgcggcattgtttgtctttcttatttcgttcgggtatttgttcggttcagattgtcat 28500891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 41988251 - 41988323
Alignment:
Q  141 gtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    ||||||| ||| |||| ||||||| ||| || ||| || ||||||||||| | |||||||||||| |||||||    
T  41988251 gtgattttgtcgtcttagtgcgacgttgttttgtttgtcgtctttgtgcggctttgtttgtcttttttgtttc 41988323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 69 - 249
Target Start/End: Complemental strand, 5613 - 5433
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||    
T  5613 ccctttaactcgtttttctatttctcttttattgaaataagtgattttcacatctgttatgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 5514  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||    
T  5513 gtttgttcgtcgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcatattgtcatatcag 5433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 1e-68; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 61 - 244
Target Start/End: Complemental strand, 29182703 - 29182520
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||  ||||||||||||||||||||||| ||||||||    
T  29182703 aaaatcatccctctaactcgtttttctctttcccttttattgaaataagtgattttcatatctattttgttttttattttgtgatttcgtcgtcttcgtg 29182604  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
     ||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||    
T  29182603 tgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaagtatttgatcggttcagattgtcat 29182520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 1165491 - 1165313
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  1165491 aaaatcacccctctaacttgtttttctttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 1165392  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  1165391 cgacgttggtttgttcgtcgtctttgtgcaacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 1165313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 43029702 - 43029880
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| ||||||||    
T  43029702 aaaatcacccctctaacttgtttttccttttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttcgtg 43029801  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  43029802 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcagttcagatt 43029880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 3088757 - 3088581
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| ||||||| || |||||||||||||||||||||||| ||||||||    
T  3088757 aaaatcacccctctaattcgtttttctattttccttttattgaaataagtgattt-cacatctatttcgttttttattttgtgatttcgtcgtcttcgtg 3088659  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  3088658 cgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttaatcgcttcagatt 3088581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 41882495 - 41882327
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||  ||||||||||||||||||||||| |||||||||||| |||    
T  41882495 ccctctaactcgtttttctatttcccttgtattgaaataagtgattt-cacatctattttgttttttattttgtgatttcgtcgtcttcgtgcgacgttg 41882397  T
Q  169 gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  41882396 gtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 41882327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 14741420 - 14741242
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||| ||||||||    
T  14741420 aaaatcacctctctaactcgtttttctctttcccttttattgaaataagtgattttcacatctatttcattttttattttgtgatttcgtcgtcttcgtg 14741321  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttg-tttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||  |||||||||    
T  14741320 cgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagatt 14741242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 71 - 249
Target Start/End: Complemental strand, 28995391 - 28995216
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggt 170  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||  |||||||||||| ||| |||||||||||| |||||    
T  28995391 ctcttactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcgtttt--attttgtgattttgtcgtcttcgtgcgacgttggt 28995294  T
Q  171 tagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    | |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||| ||||    
T  28995293 t-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctcttaggtatttgatcgcttcagattgtcatatcag 28995216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 20201153 - 20200975
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||| | ||||||    
T  20201153 aaaatcacccctctaactcgtttttctctttcacttttattgaaataagtgattttcacatctattttgttttttattttatgatttcgtcgttttcgtg 20201054  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||| ||| ||  |||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  20201053 cgacattggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagatt 20200975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 20203335 - 20203157
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||  |||||||||||| |||||||||| | ||||||    
T  20203335 aaaatcacccctctaactcgtttttctctttcacttttattgaaataagtgattttcacatctattttgttttttattttatgatttcgtcgttttcgtg 20203236  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||| ||| ||  |||||||| || ||||||||| ||||||||||||||||| |||||||||||||||||||    
T  20203235 cgacattggtttgtttgtcatctttgtgtgaggttgtttgtttttcttgtttctctcagttatttgatcggttcagatt 20203157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 57 - 235
Target Start/End: Complemental strand, 22286848 - 22286672
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||| | ||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| || |||||||||||||||||||||||| ||||    
T  22286848 acctaaaattacccctctaactcgtttttctattttccttttattgaaataagtaattt-cacatctatttcgttttttattttgtgatttcgtcgtctt 22286750  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    || ||||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| ||||    
T  22286749 cgcgcgacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggcatttgatcgcttca 22286672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 43839605 - 43839434
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattg 168  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||  |||    
T  43839605 ccctctaactcgcttttctctttcccttttattgaaataagtgattttcacatctatttcgttttttattttgtgatttcgtcatcttcgtgcgatgttg 43839506  T
Q  169 gttagttcgttgt-ctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| ||  |||||||||| |||||||| ||||||||||||||||||||||| ||| ||| |||||    
T  43839505 gtttgttcgtcgtattttgtgcgacattgtttgtttttcttgtttctctcaggtatttaatcagtttagatt 43839434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 61 - 235
Target Start/End: Original strand, 21803549 - 21803725
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| |||| |||||||||||| ||||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  21803549 aaaatcacccctctaactcgtttttctctttctcttttattgaaacaagtgattttcacatctatttcgttttttattttgtgatttcgtagtcttcgtg 21803648  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtct--ttcttgtttctctcaggtatttgatcggttca 235  Q
    ||||||||||| |||||| |||||||||||||||| ||| | |  || |||||||||| ||||||||||| ||||||    
T  21803649 cgacattggtttgttcgtcgtctttgtgcgacgtttttttttttgtttttgtttctcttaggtatttgattggttca 21803725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 47914688 - 47914510
Alignment:
Q  60 taaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||| ||||||||||||||||| | ||||| ||||||||||| ||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  47914688 taaaatcacccctctaactcgttttt-tctttccattttattgaaaaaagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgt 47914590  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttg-tttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||| ||| || |||||||| ||||||||||||| ||||||| |||||||||||||||||||  |||||||||    
T  47914589 gcgacgttggtt-gtttgtcgtctttgtccgacgttgtttgtttttcttgttttctctcaggtatttgattagttcagatt 47914510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 50519809 - 50519980
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| |||||||||| ||          
T  50519809 aaaatcacccctctaactcgtttttctatttcccttttattgaaataagtga-tttcacatctatttcgttttttattttttgatttcgtcgtc-----a 50519902  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     ||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  50519903 agacgttggtt-gttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgcttcagatt 50519980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 67 - 236
Target Start/End: Complemental strand, 33978012 - 33977845
Alignment:
Q  67 atccctctaactcgttttt-ctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgaca 165  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||| ||  |||||  ||||||||||||| || ||||||||||||     
T  33978012 atccctttaactcgttttttctatttcccttttattgaaataagtgatttttacatctattttgtttt--attttgtgatttcatcgtcttcgtgcgacg 33977915  T
Q  166 ttggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    |||||| |||||| |||||||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  33977914 ttggtt-gttcgtcgtctttgtgcgacgttgtttgtttgtcttgtttctctcaggtatttgatcgcttcag 33977845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 35501854 - 35501679
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||| || |||||||||||||||||||| ||| ||||| ||    
T  35501854 aaaatcacccctctaactcgtttttctctttcccttttactgaaataaatgattttcacatctatttcgttttttattttgtgattttgtcgtcttcatg 35501755  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
     ||| || ||| |||| | |||||||||||||||| | ||| |||||  |||||||||||||||||||||||||||    
T  35501754 tgacgttagtttgttcatcgtctttgtgcgacgttatatgtttttctattttctctcaggtatttgatcggttcag 35501679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 45664248 - 45664418
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||||||||||||||||| ||||||        |||||||||||||||| || |||||||||||||||||||||||  ||||||||    
T  45664248 aaaatcacccctctaactcgtttttctatttctctttta--------agtgattttcacatctatttcgttttttattttgtgatttcgttgtcttcgtg 45664339  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | || || |||  |||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45664340 ctacgttcgttttttcgtcatatttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 45664418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 106 - 239
Target Start/End: Original strand, 54240150 - 54240283
Alignment:
Q  106 taagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
    |||||||||||||||||| || |||||||||||||||||||||||| |||||||||||| |||||| |||||  |||||||||||| ||||||||| |||    
T  54240150 taagtgattttcacatctatttcgttttttattttgtgatttcgtcgtcttcgtgcgacgttggtttgttcgacgtctttgtgcgatgttgtttgttttt 54240249  T
Q  206 cttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||| ||||||||||||||||||||||||    
T  54240250 cttgtttctatcaggtatttgatcggttcagatt 54240283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 29776783 - 29776613
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||||||| | ||||||||||| ||||||||||| || ||||||| |||||||||||| |||||||| |||    
T  29776783 aaaatcacccctctaactcgtttttctctttcccttt-actgaaataagtggttttcacatctatttcgttttt-attttgtgattttgtcatctttgtg 29776686  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 233  Q
    |||| || ||| |||||| |||||||| || ||||||||||||||||||||||  ||||||||||| ||||||    
T  29776685 cgacgtttgtttgttcgtcgtctttgtacggcgttgtttgtctttcttgtttcgttcaggtatttgttcggtt 29776613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 80 - 239
Target Start/End: Complemental strand, 32238071 - 32237913
Alignment:
Q  80 gtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgtt 179  Q
    |||||||| ||||||||| |||||||||||||||||||| |||| || | |||||||||||||||||| |||||||| ||||||  |||||| ||||||     
T  32238071 gtttttctctttcccttt-attgaaataagtgattttcatatctatttcattttttattttgtgattttgtcatctttgtgcgatgttggtttgttcgtc 32237973  T
Q  180 gtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||| |||||||||||||||| |||||  ||||||||||| ||||||||||||    
T  32237972 gtctttgtgcggcgttgtttgtctttctagtttcgttcaggtatttgttcggttcagatt 32237913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 25374169 - 25374013
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| ||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| || | |||||||||||||||||||  | ||||    
T  25374169 acctaaaatcacccctctaactcgtttttctcttttccttttcttgaaataagtgattttcacatctatttcattttttattttgtgatttctccgtctt 25374070  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
     ||||||| |||||| |||  | |||| ||||||||||||||| |||||||||||||    
T  25374069 agtgcgactttggtttgtttatcgtctatgtgcgacgttgtttttctttcttgtttc 25374013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 40797051 - 40797230
Alignment:
Q  61 aaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||||||||||| || |||||||  |||  |||||||| | |||| ||    
T  40797051 aaaatcacccctctaacttgttttttctatttcccttttattgaaataaatgattttcacatctatttcgtttttgctttcatgatttcgccgtcttagt 40797150  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    | ||||||| || |||||| |||||||||||||||||||||||||||||||||   || |||||||| ||| ||||||||    
T  40797151 gagacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcgggtatttgttcgattcagatt 40797230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 22844070 - 22844249
Alignment:
Q  61 aaaatcatccctctaactcgtt-tttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    ||||||| |||||||||||||| ||| || ||  ||||||||||||||| |||||||| ||||| ||   |||||| ||| |||||||| || |||| ||    
T  22844070 aaaatcacccctctaactcgttctttttaattatcttttattgaaataaatgattttcgcatctattttattttttctttcgtgatttcatcgtcttagt 22844169  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||    
T  22844170 gcgacattgttttgttcgtcgtctttgtgcgacgttgtttgtctttcttgttttgttcaggtatttgttcggttcagatt 22844249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 61 - 244
Target Start/End: Original strand, 39340218 - 39340401
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||||||||||||| |||||||| ||| | ||||||||||||||||||||||||||||| || |||||||| ||| |||||||   | |||| |||    
T  39340218 aaaatcatccctctaacttgtttttctcttttctttttattgaaataagtgattttcacatctattccgttttttctttcgtgattttaccgtcttagtg 39340317  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    |||| ||| || | |||| ||||||||||| ||||||||||||||||||||||  | | ||||||| |||||| ||||| ||||    
T  39340318 cgactttgttttgctcgtcgtctttgtgcggcgttgtttgtctttcttgtttcgttaatgtatttgttcggtttagattgtcat 39340401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 81 - 239
Target Start/End: Complemental strand, 913391 - 913233
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    |||||||||||||||||| |||||||||||||||||||||||| || |||||||  ||| |||||||||   |||| ||||| ||||| || |||||| |    
T  913391 tttttctatttccctttttttgaaataagtgattttcacatctatttcgtttttgctttcgtgatttcgctgtcttagtgcggcattgttttgttcgtcg 913292  T
Q  181 tctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||||||||||||||||||||||   |  |||||||| ||||||||||||    
T  913291 tctttgtgcgacgttgtttgtctttcttgttttgtttgggtatttgttcggttcagatt 913233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 40462090 - 40461912
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||| | | |||| |||||| || || ||||||||||||||||| ||| |||| |||    
T  40462090 aaaatcacccctctaacttgtttttctctttcccttttattgaaatacgcggtttttacatctatttcggtttttattttgtgattttgtcgtcttagtg 40461991  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||  ||| || |||||| ||||||||||| ||||||||||||||||||||||   ||  |||||||| ||||||||||    
T  40461990 cgatgttgatttgttcgtcgtctttgtgcggcgttgtttgtctttcttgtttcatacatatatttgattggttcagatt 40461912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 20251671 - 20251851
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttta-----ttttgtgatttcgtcatct 155  Q
    ||||||| || |||||||||||||||| ||||||||| |||||||||||||||||||| |||| ||   |||||||     ||||||||||| ||| |||    
T  20251671 aaaatcacccttctaactcgtttttctctttccctttgattgaaataagtgattttcatatctattttcttttttattttgttttgtgattttgtcgtct 20251770  T
Q  156 tcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcag 236  Q
    ||||||||| |||||| |||||| ||||||||| |||||| | ||| |||||  ||||||||||||||| |||||||||||    
T  20251771 tcgtgcgacgttggtttgttcgtcgtctttgtgtgacgttatatgtttttctattttctctcaggtattcgatcggttcag 20251851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 249
Target Start/End: Complemental strand, 32090021 - 32089837
Alignment:
Q  65 tcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgac 164  Q
    |||||| |||||||| |||||||   ||  ||||||||||||||||||||||||||||| || | |||||||||||||||||||||| |||| |||||||    
T  32090021 tcatccatctaactcatttttctcaatcttttttattgaaataagtgattttcacatctatttcattttttattttgtgatttcgtcgtcttagtgcgac 32089922  T
Q  165 attggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcatttcag 249  Q
    |||  || || ||| ||||||||| | | ||||||||||||||||||||  ||| ||||||| | |||| ||||| |||| ||||    
T  32089921 attactttgtccgtcgtctttgtggggcattgtttgtctttcttgtttcgttcatgtatttgtttggtttagattgtcatatcag 32089837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 22893809 - 22893645
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtttttt-attttgtgatttcgtcatcttcgt 159  Q
    ||||||| || ||||||| ||||||||  ||||||||||||  ||||||||||||||||| || || |||||||| |||||||||||||||| |||| ||    
T  22893809 aaaatcacccttctaacttgtttttct--ttcccttttattagaataagtgattttcacacctatttcgtttttttattttgtgatttcgtcttcttagt 22893712  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttg 226  Q
    ||||| |||||| ||||||  ||||||| || ||||||||||||||||||||||  |||| ||||||    
T  22893711 gcgacgttggtttgttcgtcatctttgtacggcgttgtttgtctttcttgtttcgttcagatatttg 22893645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 93 - 239
Target Start/End: Original strand, 21585950 - 21586096
Alignment:
Q  93 ccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgac 192  Q
    ||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||| ||| ||| ||| ||  ||||| |||||| |  |||    
T  21585950 ccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcatcttagtgtgacgttgatttattcgtcgtctttttttgac 21586049  T
Q  193 gttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     |||||||||||| ||||||   ||||||| ||| ||||||||||||    
T  21586050 tttgtttgtcttttttgttttgttcaggtacttgttcggttcagatt 21586096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 144 - 239
Target Start/End: Complemental strand, 7656527 - 7656432
Alignment:
Q  144 atttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||| | |||||||||||| |||||| |||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  7656527 atttcgccgtcttcgtgcgacgttggtttgttcgtcgtctttgtgcgatattgtttgtctttcttgtttctctcaggtatttgatcggtttagatt 7656432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 36540755 - 36540591
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||  | ||||| ||| ||||||||||| |||| ||||||| ||| ||    
T  36540755 tctaactcgtttt-ctatttcccttttattgaaataagtgattttcacatttattttg-tttttctttcgtgatttcgtcgtcttagtgcgacgttgttt 36540658  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
     | |||| ||| ||||| || |||||||||||||||||||||  ||| |||||||  |||||||||||    
T  36540657 tgatcgtcgtc-ttgtgggatgttgtttgtctttcttgtttcattcaagtatttgtccggttcagatt 36540591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 53426823 - 53426995
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||||||||||| ||||      ||||||||||||||||||||||||| || | |||||| ||||||||||||||| |||| |||    
T  53426823 aaaatcacccctctaactcgtttttctctttc------attgaaataagtgattttcacatctatttcattttttcttttgtgatttcgtcgtcttagtg 53426916  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| ||   | ||||||  |||||||| | | |||||||||||||||||||   ||||||||||| |||||| |||||    
T  53426917 cgacgttttgttgttcgtcatctttgtgtgcctttgtttgtctttcttgttttgttcaggtatttgttcggtttagatt 53426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 233
Target Start/End: Original strand, 2598102 - 2598270
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  |||||||||||||||| | |||  ||||||||||||||| |||||||||||||| || | |||||| |||||||||||| ||||||| | |    
T  2598102 aaaatcactcctctaactcgtttttatcttttgcttttattgaaataactgattttcacatctattccattttttcttttgtgatttcatcatcttagcg 2598201  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggtt 233  Q
    |    ||| || |||| | |||||||||| ||||||||| |||||||||||||  ||| ||||||| ||||||    
T  2598202 c----ttgtttcgttcatcgtctttgtgcaacgttgtttctctttcttgtttcgttcatgtatttgttcggtt 2598270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 164
Target Start/End: Original strand, 33076331 - 33076434
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| ||||||||||| |||| || ||| |||||||||||||||||||||||| |||||| || |||||||||||||||||||| ||| | ||||||    
T  33076331 aaaatcacccctctaactcattttcctcttttccttttattgaaataagtgatttttacatctatttcgttttttattttgtgattttgtcgttttcgtg 33076430  T
Q  161 cgac 164  Q
    ||||    
T  33076431 cgac 33076434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 235
Target Start/End: Original strand, 34767006 - 34767179
Alignment:
Q  69 ccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgtt------ttttattttgtgatttcgtcatcttcgtgcg 162  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | || ||||      |||||||||||||| ||||| |||| |||||    
T  34767006 ccctctaactcgtttttctctttcccttttattgaaataagtgattttcacatttatttcgttattttattttattttgtgatctcgtcgtctttgtgcg 34767105  T
Q  163 acattgg-ttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
    |  |||| || ||   | ||||||||| || |||||||||||||||||||||  ||| ||||||| || |||||    
T  34767106 atgttggttttgtctatcgtctttgtgtgatgttgtttgtctttcttgtttcgttcaagtatttgttcagttca 34767179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 199
Target Start/End: Original strand, 42106126 - 42106269
Alignment:
Q  57 acctaaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatct 155  Q
    ||||||||||| || ||||||  ||||| ||||||||||||||||||||||||||||||||||||| | || |||||||  |||  |||||||| | |||    
T  42106126 acctaaaatcacccatctaacctgttttttctatttcccttttattgaaataagtgattttcacatatatttcgtttttgctttcctgatttcgccgtct 42106225  T
Q  156 tcgtgcgacattggttagttcgttgtctttgtgcgacgttgttt 199  Q
    | ||||||| ||| ||   |||| ||||||||||||||||||||    
T  42106226 tagtgcgacgttgtttttatcgtcgtctttgtgcgacgttgttt 42106269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 239
Target Start/End: Complemental strand, 25939541 - 25939396
Alignment:
Q  94 cttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacg 193  Q
    |||||||| |||||||| |||||||||||| ||  ||||||| ||| ||||||||||  |||  ||||||| ||| || ||| || ||||||||||| ||    
T  25939541 cttttattcaaataagttattttcacatctattctgttttttctttcgtgatttcgttgtctcagtgcgacgttgttttgttagtcgtctttgtgcggcg 25939442  T
Q  194 ttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||| |||||||  |||| |||||| |  |||||||||    
T  25939441 ttgtttgtctttgttgtttcgttcagatatttgttatgttcagatt 25939396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 11846687 - 11846745
Alignment:
Q  180 gtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  11846687 gtctttgtgcgacgtttttt-tctttcttgtttctctcaggtatttgatcggttcagatt 11846745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 201
Target Start/End: Original strand, 40365290 - 40365385
Alignment:
Q  106 taagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgt 201  Q
    |||||||||||||||||| ||  ||||||||||||||||||| ||||||||  |||||| |||||| ||| || |||||||| || ||||||||||    
T  40365290 taagtgattttcacatctattttgttttttattttgtgattttgtcatcttaatgcgacgttggtttgtttgtcgtctttgtacggcgttgtttgt 40365385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 50460227 - 50460387
Alignment:
Q  77 ctcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttc 176  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||| ||    ||||| ||| ||||||| |||  ||| ||||||  ||| || ||||    
T  50460227 ctcgtttttctctttctcttttattgaaataagtgattttcacatctatt-ttatttttctttcgtgattttgtcgccttagtgcgatgttgttttgttc 50460325  T
Q  177 gttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||||||||||    |||||||||||||||| ||||  |||| |||||| |||||| |||||    
T  50460326 gttgtctttgtg-tttgttgtttgtctttcttatttcgttcagttatttgttcggtttagatt 50460387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 148
Target Start/End: Original strand, 26412361 - 26412438
Alignment:
Q  71 ctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttc 148  Q
    |||||| |||||||||| | ||||||||||||||||||| ||||||||||||| || |||| ||| ||||||||||||    
T  26412361 ctctaagtcgtttttctctctcccttttattgaaataagcgattttcacatctatttcgttctttcttttgtgatttc 26412438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 239
Target Start/End: Original strand, 4019620 - 4019795
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| | ||||||||||||||||| ||||      ||||||||||| ||| ||||||||| || |  |||||  || ||||||||||| |||| |||    
T  4019620 aaaatcacctctctaactcgtttttctctttc------attgaaataagcgatcttcacatctatttcacttttttcttcgtgatttcgtcgtcttagtg 4019713  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttg---tttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||  | |||||| ||||||||||| |||||   ||||||||| ||||||   ||||||||||| ||||||||||||    
T  4019714 cgacgttgtgttgttcgtcgtctttgtgcggcgttgttttttgtctttattgttttgttcaggtatttgttcggttcagatt 4019795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 1220310 - 1220255
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgatttt 116  Q
    ||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1220310 aaaatcacccctctaactcgtttttctctttcccttttgttgaaataagtgatttt 1220255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 177
Target Start/End: Original strand, 27831126 - 27831247
Alignment:
Q  57 acctaaaatcatccctctaactcgtttt-tctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatct 155  Q
    ||||||||||| || ||||||| | ||| ||| | ||| || |||||||||||||| ||||||||||| || ||||||| ||||||||||||  |  |||    
T  27831126 acctaaaatcacccatctaacttggtttctctctatccattctattgaaataagtgtttttcacatctattccgtttttgattttgtgatttttttgtct 27831225  T
Q  156 tcgtgcgacattggttagttcg 177  Q
    | ||||||| |||||| |||||    
T  27831226 tagtgcgacgttggtttgttcg 27831247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 164
Target Start/End: Original strand, 37051645 - 37051746
Alignment:
Q  63 aatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcg 162  Q
    ||||| |||||||| ||||||||||  ||||||| |||| || |||||||||||||||||   |  | ||||  ||||||||||||||| |||| |||||    
T  37051645 aatcacccctctaaatcgtttttctccttcccttctatttaagtaagtgattttcacatcgaattaggttttccttttgtgatttcgtcgtcttagtgcg 37051744  T
Q  163 ac 164  Q
    ||    
T  37051745 ac 37051746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 205
Target Start/End: Complemental strand, 1806554 - 1806411
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| |||||||| ||||||||||  |||| || |||| |||||||| |||||||||||   |  | ||||| ||||||||||||||| ||||  |||    
T  1806554 aaatcacccctctaaatcgtttttctccttccattctatttaaataagttattttcacatcgaattaggtttttcttttgtgatttcgtcgtcttaatgc 1806455  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
     ||  || || ||  || |||||||| ||| |||||||||||||    
T  1806454 aacgctgttttgtcggtcgtctttgtacgaagttgtttgtcttt 1806411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 62 - 121
Target Start/End: Original strand, 33070174 - 33070233
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacat 121  Q
    |||||| |||||||| ||||||||||  |||| ||||||| |||||| ||||||||||||    
T  33070174 aaatcacccctctaaatcgtttttctcattcctttttatttaaataaatgattttcacat 33070233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 244
Target Start/End: Original strand, 43242830 - 43243010
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||| || | |||||||||||||| | ||||||||| ||||||||||| ||||||| ||| |    |||||| |||||||||||| |  ||||  ||    
T  43242830 aaaatcacccatttaactcgtttttctctgtcccttttactgaaataagtgtttttcacttctat----tttttttttttgtgatttcattgtcttaatg 43242925  T
Q  161 cgacattg-gttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagattttcat 244  Q
    |||| |||  || ||| |  ||||||||| | | |||||||| ||| |||||||  ||||||||||  |||| ||||||| ||||    
T  43242926 cgacgttgcttttgtttgccgtctttgtggggctttgtttgtttttattgtttcattcaggtatttattcggctcagattgtcat 43243010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 1220262 - 1220190
Alignment:
Q  141 gtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttc 213  Q
    ||||||| ||| |||| ||||||  ||| || |||||| ||||||||||| | |||||||||||| |||||||    
T  1220262 gtgattttgtcgtcttagtgcgatgttgttttgttcgtcgtctttgtgcggctttgtttgtcttttttgtttc 1220190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 239
Target Start/End: Original strand, 33076428 - 33076482
Alignment:
Q  186 gtgcgacgttgtttgtctttcttgt--ttctctcaggtatttgatcggttcagatt 239  Q
    ||||||| |||||||| ||||||||  |||| ||||||||||||||||||||||||    
T  33076428 gtgcgaccttgtttgt-tttcttgtgtttctttcaggtatttgatcggttcagatt 33076482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 61 - 239
Target Start/End: Complemental strand, 12298 - 12120
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||| ||||||||    
T  12298 aaaatcatctctctagctcgttcttctctttcccttttattgaaataagtgattttcacacctatttcgttttttattttgtgatttcgtcgtcttcgtg 12199  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12198 cgacgttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgatcggttcagatt 12120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 244656 - 244833
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgc 161  Q
    |||||| ||||||||||||||||||| ||| | ||||||||||||||||||||||||||||| || ||||||||| |||||||||| ||| |||||||||    
T  244656 aaatcacccctctaactcgtttttctcttttctttttattgaaataagtgattttcacatctatttcgttttttagtttgtgattttgtcgtcttcgtgc 244755  T
Q  162 gacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||| |||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  244756 gaccttggtttgttcgtcgtctttgtgcgacgttgtttgtttttcttgtttctctcaggtatttgaccggttcagatt 244833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 57 - 239
Target Start/End: Original strand, 36544 - 36721
Alignment:
Q  57 acctaaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatctt 156  Q
    ||||||||||| || |||||||||||||||  ||||||||||||||||||||||||||||||||||| ||   |||||||||||||||||||||| ||||    
T  36544 acctaaaatcacccttctaactcgtttttccttttcccttttattgaaataagtgattttcacatctattttattttttattttgtgatttcgtcgtctt 36643  T
Q  157 cgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    |||||||| |||||| |||||| ||||||||||||||||     | ||| ||||||||||||||||||||||| |||||||||    
T  36644 cgtgcgacgttggtttgttcgtcgtctttgtgcgacgtt-----ttttttttgtttctctcaggtatttgatcagttcagatt 36721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 72 - 235
Target Start/End: Complemental strand, 1225 - 1062
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||| ||||||| ||||||    
T  1225 tctaactcgtttttctctttcccttttattgaaataagtgattttcacatctattttgttttttattttgtgatttcgtcgtcttagtgcgacgttggtt 1126  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttca 235  Q
     |||||| || ||||||||| |||| ||||||||||||| ||  ||||||||||| | ||||||    
T  1125 tgttcgtcgtatttgtgcgaagttgattgtctttcttgtatcgttcaggtatttgtttggttca 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 60 - 239
Target Start/End: Original strand, 11037 - 11211
Alignment:
Q  60 taaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgt 159  Q
    |||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||||||||| || ||  |||||| |||||||||||||||    |||||    
T  11037 taaaatcacccctctaactcatttttctttttccctcttattgaaataagtgattttcacagctattctgttttt-attttgtgatttcgt----ttcgt 11131  T
Q  160 gcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatcggttcagatt 239  Q
    ||||| |||||| |||||  |||||| ||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  11132 gcgacgttggtttgttcgccgtctttatgcgacgttgtttgtttttcttgtttctctcaggtatttgatcgatttagatt 11211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 1154 - 1044
Alignment:
Q  129 gttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgat 228  Q
    |||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||| |||||  |||||||| ||||||||||||||||||||||||||    
T  1154 gttttttattttgtgatttcgtcatcttcgtgtgacgttggtttgttcgttgtctttttgcgaaattgtttgtttttcttgtttctctcaggtatttgat 1055  T
Q  229 cggttcagatt 239  Q
    |||||||||||    
T  1054 cggttcagatt 1044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 81 - 212
Target Start/End: Complemental strand, 137133 - 137002
Alignment:
Q  81 tttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttg 180  Q
    ||||||||||||||||||| |||||||||||||||| |||||| || |||||||| ||||||||||||||| |||| || |||| ||| || |||| | |    
T  137133 tttttctatttcccttttaatgaaataagtgattttaacatctatttcgttttttcttttgtgatttcgtcgtcttagtacgacgttgttttgttcatcg 137034  T
Q  181 tctttgtgcgacgttgtttgtctttcttgttt 212  Q
    ||||||||||||||||||||| ||||||||||    
T  137033 tctttgtgcgacgttgtttgtttttcttgttt 137002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 225
Target Start/End: Complemental strand, 9743 - 9589
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||         ||||||||||||| |||||||     
T  9743 aaaatcactcctctaactcgtttttctatttcccttttattgaattaagtgattttcacatctatttcg---------ttgtgatttcgtcgtcttcgta 9653  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtattt 225  Q
    |||| |||||| ||||||  ||||||||||||||| ||||| || ||||||||||| ||||||||    
T  9652 cgacgttggtt-gttcgtcttctttgtgcgacgttttttgttttccttgtttctcttaggtattt 9589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 211
Target Start/End: Original strand, 799 - 949
Alignment:
Q  61 aaaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtg 160  Q
    ||||||||| |||||||||||||| || |||||||||||||||||||||||  |||||||||| || |||||||| ||  ||||||||||||| |  |||    
T  799 aaaatcatcactctaactcgttttcctctttcccttttattgaaataagtggctttcacatctatttcgttttttcttccgtgatttcgtcatttgagtg 898  T
Q  161 cgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtt 211  Q
     ||||||  || |||    ||||||||||| ||||||||||||||||||||    
T  899 tgacattcttttgtttcccgtctttgtgcggcgttgtttgtctttcttgtt 949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 205
Target Start/End: Complemental strand, 11861 - 11729
Alignment:
Q  72 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggtt 171  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||| ||| |||||||| || |||| ||||||  ||| ||    
T  11861 tctaactcgtttttctatttcccttttattgaaataagtgattttcacatctatttcg-tttttctttcgtgatttcatcgtcttagtgcgaagttgttt 11763  T
Q  172 agttcgttgtctttgtgcgacgttgtttgtcttt 205  Q
     |   || | |||||||||||||| |||||||||    
T  11762 tgcctgtcgactttgtgcgacgttatttgtcttt 11729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 10354 - 10254
Alignment:
Q  113 ttttcacatctgttacgttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgttt 212  Q
    ||||||||||| ||  ||||||||||||||||||| ||  |||| ||||||| |||||| |||||| ||||||||||   ||||||||||||||||||||    
T  10354 ttttcacatctatttagttttttattttgtgatttggttgtcttagtgcgacgttggtttgttcgtcgtctttgtgcattgttgtttgtctttcttgttt 10255  T
Q  213 c 213  Q
    |    
T  10254 c 10254  T

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Target: scaffold0627 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0627
Description:

Target: scaffold0627; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 6811 - 6704
Alignment:
Q  130 ttttttattttgtgatttcgtcatcttcgtgcgacattggttagttcgttgtctttgtgcgacgttgtttgtctttcttgtttctctcaggtatttgatc 229  Q
    |||||||||||||||||| ||  |||| |||| || |||||| |||||| ||||  ||||| |||| |||||||||||||||||  ||||| ||||||||    
T  6811 ttttttattttgtgattttgttgtcttagtgcaacgttggtttgttcgtcgtct--gtgcggcgttatttgtctttcttgtttcgttcaggcatttgatc 6714  T
Q  230 ggttcagatt 239  Q
    |||| |||||    
T  6713 ggtttagatt 6704  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 105072 - 105132
Alignment:
Q  62 aaatcatccctctaactcgtttttctatttcccttttattgaaataagtgattttcacatc 122  Q
    |||||| |||||||  ||||||||||  ||||| ||| || ||||||||||||||||||||    
T  105072 aaatcagccctctacatcgtttttctccttcccctttgtttaaataagtgattttcacatc 105132  T

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