View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4240_high_9 (Length: 284)
Name: NF4240_high_9
Description: NF4240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4240_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 13 - 264
Target Start/End: Original strand, 38558175 - 38558426
Alignment:
| Q |
13 |
atacttgaatcataagacaattgtggtgagattaacttcacttaccattcacgtaatgagtgtcccaagacttgccaactgagaaattcatctcaccaca |
112 |
Q |
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| T |
38558175 |
atacttgaatcataagacaattgtggtgagattaacttcacttaccattcacgtaatgagtgtcccaagacttgccaactgagaaattcatctcaccaca |
38558274 |
T |
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| Q |
113 |
tgtggagagttagtcatgccaaattaatagaagaatttcagattcttaattttaaggatgcatcaaattttcaccatcgcaaaatcagatagattcataa |
212 |
Q |
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| T |
38558275 |
tgtggagagttagtcatgccaaattaatagaagaatttcagattcttaattttaaggatgcatcaaattttcaccatcgcagaatcggatagattcataa |
38558374 |
T |
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| Q |
213 |
aatgtgacaaaggaaagttggaacctcgacttataaaggatattcacattta |
264 |
Q |
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| T |
38558375 |
aatgtgacaaagcaaagttggaacctcgacttataaaggatattcacattta |
38558426 |
T |
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