View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4240_low_11 (Length: 253)

Name: NF4240_low_11
Description: NF4240
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4240_low_11
NF4240_low_11
[»] chr2 (60 HSPs)
chr2 (9-239)||(40621827-40622057)
chr2 (6-215)||(22798769-22798978)
chr2 (24-239)||(45677774-45677989)
chr2 (6-239)||(22740579-22740812)
chr2 (6-239)||(24673843-24674076)
chr2 (6-236)||(23019328-23019558)
chr2 (1-215)||(23038297-23038511)
chr2 (2-239)||(37524927-37525164)
chr2 (9-239)||(21917935-21918165)
chr2 (27-239)||(25963336-25963548)
chr2 (6-239)||(22758334-22758567)
chr2 (1-215)||(23100873-23101087)
chr2 (24-205)||(44369952-44370133)
chr2 (31-113)||(22460936-22461018)
chr2 (79-239)||(22811553-22811713)
chr2 (32-239)||(21327196-21327393)
chr2 (30-239)||(24735680-24735879)
chr2 (32-239)||(21318265-21318462)
chr2 (24-211)||(24716188-24716365)
chr2 (32-106)||(15477883-15477957)
chr2 (31-113)||(18855207-18855289)
chr2 (31-113)||(23187353-23187435)
chr2 (31-216)||(23598616-23598791)
chr2 (32-113)||(61094-61175)
chr2 (32-113)||(19928248-19928329)
chr2 (35-219)||(24175093-24175267)
chr2 (35-218)||(24654989-24655162)
chr2 (31-216)||(40428753-40428929)
chr2 (30-113)||(19688502-19688585)
chr2 (131-238)||(24658032-24658139)
chr2 (35-106)||(25961287-25961358)
chr2 (32-93)||(12901278-12901339)
chr2 (32-93)||(24649636-24649697)
chr2 (35-219)||(24870173-24870347)
chr2 (32-93)||(27379198-27379259)
chr2 (32-93)||(27383244-27383305)
chr2 (32-93)||(27602076-27602137)
chr2 (34-93)||(26125484-26125543)
chr2 (34-93)||(41667230-41667289)
chr2 (32-93)||(24628244-24628305)
chr2 (32-93)||(41530775-41530836)
chr2 (9-62)||(22811708-22811761)
chr2 (45-93)||(24503402-24503450)
chr2 (49-85)||(23071733-23071769)
chr2 (40-87)||(27197172-27197219)
chr2 (50-101)||(32451685-32451736)
chr2 (51-85)||(22133986-22134020)
chr2 (32-62)||(27263552-27263582)
chr2 (178-219)||(37765-37806)
chr2 (179-216)||(19928155-19928192)
chr2 (179-216)||(22460843-22460880)
chr2 (179-216)||(23187491-23187528)
chr2 (174-215)||(23286288-23286329)
chr2 (179-216)||(26125619-26125656)
chr2 (178-219)||(28291940-28291981)
chr2 (179-216)||(41667365-41667402)
chr2 (49-85)||(37888-37924)
chr2 (31-87)||(10101417-10101473)
chr2 (53-101)||(27753892-27753940)
chr2 (49-85)||(31756231-31756267)
[»] scaffold0210 (2 HSPs)
scaffold0210 (24-239)||(21425-21640)
scaffold0210 (24-239)||(29317-29532)
[»] scaffold0324 (1 HSPs)
scaffold0324 (6-239)||(15668-15901)
[»] scaffold0215 (1 HSPs)
scaffold0215 (9-238)||(27093-27322)
[»] chr7 (97 HSPs)
chr7 (6-239)||(9703534-9703767)
chr7 (22-239)||(10508701-10508918)
chr7 (24-239)||(17137682-17137897)
chr7 (22-239)||(11880536-11880753)
chr7 (1-215)||(18154479-18154693)
chr7 (24-239)||(12187299-12187514)
chr7 (24-239)||(12321361-12321576)
chr7 (6-220)||(24054736-24054950)
chr7 (6-215)||(19649127-19649336)
chr7 (27-239)||(14430167-14430379)
chr7 (24-239)||(2760413-2760628)
chr7 (69-238)||(15211759-15211928)
chr7 (30-216)||(48593109-48593285)
chr7 (30-239)||(11312925-11313124)
chr7 (31-114)||(16438779-16438862)
chr7 (31-113)||(6801490-6801572)
chr7 (30-239)||(15580968-15581168)
chr7 (22-113)||(18804-18895)
chr7 (30-113)||(11987489-11987572)
chr7 (30-113)||(13635215-13635298)
chr7 (32-216)||(13149433-13149607)
chr7 (32-113)||(15728603-15728684)
chr7 (31-239)||(26292673-26292871)
chr7 (30-113)||(12318404-12318487)
chr7 (31-113)||(14217192-14217274)
chr7 (31-105)||(18557249-18557323)
chr7 (30-106)||(9593622-9593698)
chr7 (30-106)||(9644585-9644661)
chr7 (31-106)||(13462039-13462114)
chr7 (31-113)||(16724377-16724459)
chr7 (31-113)||(17701391-17701473)
chr7 (30-239)||(15604902-15605101)
chr7 (31-106)||(8917704-8917779)
chr7 (35-113)||(9445904-9445982)
chr7 (32-93)||(12718948-12719009)
chr7 (32-93)||(12723859-12723920)
chr7 (32-93)||(16906966-16907027)
chr7 (32-93)||(18279683-18279744)
chr7 (32-93)||(18283646-18283707)
chr7 (34-113)||(16275772-16275851)
chr7 (35-113)||(20569342-20569420)
chr7 (40-113)||(11262615-11262688)
chr7 (40-113)||(11548013-11548086)
chr7 (40-113)||(11554609-11554682)
chr7 (40-113)||(12692782-12692855)
chr7 (32-93)||(12715144-12715205)
chr7 (40-113)||(14953484-14953557)
chr7 (32-93)||(16114521-16114582)
chr7 (32-93)||(16117674-16117735)
chr7 (42-93)||(35151894-35151945)
chr7 (40-113)||(14959450-14959523)
chr7 (40-113)||(25038956-25039029)
chr7 (33-105)||(42205394-42205466)
chr7 (69-238)||(16583550-16583709)
chr7 (124-239)||(3272173-3272288)
chr7 (179-239)||(13635099-13635159)
chr7 (50-98)||(15143795-15143843)
chr7 (45-85)||(18302489-18302529)
chr7 (178-219)||(11995696-11995737)
chr7 (174-219)||(34201221-34201266)
chr7 (31-68)||(39722544-39722581)
chr7 (39-87)||(4318317-4318365)
chr7 (179-239)||(17701275-17701335)
chr7 (49-85)||(28505071-28505107)
chr7 (50-102)||(44116820-44116872)
chr7 (46-85)||(2832075-2832114)
chr7 (46-85)||(39267416-39267455)
chr7 (50-101)||(40443703-40443754)
chr7 (40-90)||(18531531-18531581)
chr7 (178-220)||(26212427-26212469)
chr7 (178-220)||(28504938-28504980)
chr7 (179-216)||(11043-11080)
chr7 (179-216)||(18711-18748)
chr7 (178-215)||(2831948-2831985)
chr7 (179-216)||(6801628-6801665)
chr7 (179-216)||(9593761-9593798)
chr7 (179-216)||(9644724-9644761)
chr7 (178-215)||(9751192-9751229)
chr7 (179-216)||(11987628-11987665)
chr7 (48-85)||(11995800-11995837)
chr7 (179-216)||(15728740-15728777)
chr7 (179-216)||(16275907-16275944)
chr7 (179-216)||(16724284-16724321)
chr7 (178-219)||(27847482-27847523)
chr7 (179-216)||(35152021-35152058)
chr7 (50-99)||(38227795-38227844)
chr7 (178-219)||(40443819-40443860)
chr7 (31-87)||(33385-33441)
chr7 (49-85)||(68060-68096)
chr7 (31-87)||(70537-70593)
chr7 (31-87)||(74646-74702)
chr7 (45-85)||(810900-810940)
chr7 (172-220)||(9389332-9389380)
chr7 (49-85)||(9389466-9389502)
chr7 (49-85)||(9751320-9751356)
chr7 (179-239)||(12318543-12318603)
chr7 (49-85)||(34201098-34201134)
[»] chr4 (79 HSPs)
chr4 (6-239)||(13569779-13570012)
chr4 (6-239)||(15094040-15094273)
chr4 (22-239)||(15124773-15124990)
chr4 (6-239)||(44675899-44676132)
chr4 (24-239)||(12570306-12570521)
chr4 (6-239)||(15121422-15121655)
chr4 (6-239)||(23843745-23843979)
chr4 (27-239)||(16356572-16356784)
chr4 (9-239)||(16487697-16487927)
chr4 (30-239)||(36133592-36133791)
chr4 (33-113)||(19757347-19757427)
chr4 (33-113)||(19782379-19782459)
chr4 (80-239)||(16348311-16348470)
chr4 (31-113)||(17152233-17152315)
chr4 (31-216)||(18237170-18237345)
chr4 (31-113)||(23139548-23139630)
chr4 (31-113)||(26243411-26243493)
chr4 (31-113)||(45938425-45938507)
chr4 (33-113)||(16678335-16678415)
chr4 (32-113)||(9556809-9556890)
chr4 (31-219)||(11250211-11250389)
chr4 (30-106)||(1951514-1951590)
chr4 (31-218)||(15352957-15353134)
chr4 (35-113)||(3413078-3413156)
chr4 (39-113)||(16243146-16243220)
chr4 (32-236)||(2015057-2015251)
chr4 (35-219)||(16351498-16351672)
chr4 (32-113)||(18222124-18222205)
chr4 (30-93)||(43255927-43255990)
chr4 (31-113)||(9530711-9530793)
chr4 (35-219)||(25555798-25555972)
chr4 (32-113)||(28569190-28569271)
chr4 (35-113)||(18602491-18602569)
chr4 (31-93)||(27534303-27534365)
chr4 (32-93)||(4561099-4561160)
chr4 (32-93)||(5756703-5756764)
chr4 (32-93)||(33742657-33742718)
chr4 (178-239)||(17047702-17047763)
chr4 (44-113)||(18609085-18609154)
chr4 (40-113)||(23838720-23838793)
chr4 (34-93)||(14708400-14708459)
chr4 (34-93)||(42997216-42997275)
chr4 (40-93)||(14679249-14679302)
chr4 (40-93)||(14685458-14685511)
chr4 (40-113)||(41385491-41385564)
chr4 (40-113)||(35614226-35614298)
chr4 (45-85)||(22633983-22634023)
chr4 (46-85)||(3332197-3332236)
chr4 (50-101)||(7089191-7089242)
chr4 (46-85)||(13812579-13812618)
chr4 (50-101)||(17047828-17047879)
chr4 (46-85)||(24029053-24029092)
chr4 (174-215)||(13812451-13812492)
chr4 (178-215)||(24029183-24029220)
chr4 (45-85)||(12774309-12774349)
chr4 (50-101)||(3096957-3097008)
chr4 (49-88)||(15190631-15190670)
chr4 (46-85)||(20157060-20157099)
chr4 (50-85)||(44102525-44102560)
chr4 (50-85)||(44928694-44928729)
chr4 (179-216)||(1951414-1951451)
chr4 (44-93)||(12522375-12522424)
chr4 (174-215)||(13844977-13845018)
chr4 (178-219)||(14052951-14052992)
chr4 (179-216)||(14708287-14708324)
chr4 (179-216)||(16243053-16243090)
chr4 (179-216)||(18222031-18222068)
chr4 (179-216)||(23139686-23139723)
chr4 (179-216)||(26243318-26243355)
chr4 (179-220)||(27534441-27534482)
chr4 (179-216)||(28569097-28569134)
chr4 (179-216)||(43255813-43255850)
chr4 (179-216)||(45938563-45938600)
chr4 (49-85)||(8846688-8846724)
chr4 (49-85)||(15099664-15099700)
chr4 (183-219)||(17053478-17053514)
chr4 (31-87)||(17810550-17810606)
chr4 (50-90)||(21815068-21815108)
chr4 (50-90)||(21818490-21818530)
[»] chr5 (86 HSPs)
chr5 (6-239)||(23201636-23201869)
chr5 (6-238)||(37724171-37724403)
chr5 (24-239)||(22032601-22032816)
chr5 (6-239)||(23500964-23501197)
chr5 (6-239)||(14079415-14079648)
chr5 (24-239)||(18769623-18769838)
chr5 (6-236)||(23512374-23512604)
chr5 (1-215)||(26704328-26704542)
chr5 (1-215)||(26974061-26974275)
chr5 (39-239)||(21887124-21887324)
chr5 (27-238)||(21366286-21366497)
chr5 (6-239)||(20805814-20806047)
chr5 (24-164)||(23572364-23572504)
chr5 (35-238)||(31342399-31342602)
chr5 (30-239)||(17410724-17410923)
chr5 (30-215)||(20910454-20910629)
chr5 (30-216)||(23535242-23535418)
chr5 (31-113)||(21340513-21340595)
chr5 (31-113)||(26665877-26665959)
chr5 (31-113)||(26937474-26937556)
chr5 (31-239)||(17918781-17918979)
chr5 (30-113)||(18356604-18356687)
chr5 (31-216)||(16674430-16674605)
chr5 (31-113)||(20232828-20232910)
chr5 (31-216)||(24532701-24532876)
chr5 (31-219)||(12028215-12028393)
chr5 (31-114)||(18774482-18774565)
chr5 (31-114)||(42805698-42805781)
chr5 (35-113)||(17718185-17718263)
chr5 (32-114)||(25229151-25229233)
chr5 (32-114)||(25293307-25293389)
chr5 (32-113)||(21884935-21885016)
chr5 (30-103)||(23451634-23451707)
chr5 (30-103)||(23463139-23463212)
chr5 (35-219)||(24222170-24222344)
chr5 (31-239)||(26742376-26742574)
chr5 (30-103)||(1858732-1858805)
chr5 (32-113)||(4036499-4036580)
chr5 (30-103)||(23458878-23458951)
chr5 (32-113)||(26172743-26172824)
chr5 (42-114)||(18784336-18784408)
chr5 (31-218)||(26680868-26681045)
chr5 (31-218)||(26952475-26952652)
chr5 (6-85)||(21873516-21873595)
chr5 (32-113)||(19472465-19472546)
chr5 (31-94)||(123070-123133)
chr5 (32-93)||(20296127-20296188)
chr5 (40-113)||(21295009-21295082)
chr5 (40-113)||(25535275-25535348)
chr5 (31-75)||(22757414-22757458)
chr5 (40-93)||(15441720-15441773)
chr5 (40-87)||(23337060-23337107)
chr5 (190-239)||(23572510-23572559)
chr5 (46-85)||(22119963-22120002)
chr5 (124-239)||(22760026-22760141)
chr5 (40-113)||(24554820-24554893)
chr5 (49-85)||(19660608-19660644)
chr5 (50-85)||(11581016-11581051)
chr5 (40-87)||(14359591-14359638)
chr5 (50-101)||(22107129-22107180)
chr5 (46-85)||(24767107-24767146)
chr5 (31-62)||(33409506-33409537)
chr5 (178-220)||(19660474-19660516)
chr5 (179-216)||(4036636-4036673)
chr5 (179-216)||(17718092-17718129)
chr5 (179-216)||(18356743-18356780)
chr5 (179-216)||(18784463-18784500)
chr5 (174-215)||(19669338-19669379)
chr5 (178-219)||(21292619-21292660)
chr5 (179-216)||(21340420-21340457)
chr5 (179-216)||(21482894-21482931)
chr5 (179-216)||(21884842-21884879)
chr5 (178-239)||(22119811-22119872)
chr5 (179-216)||(25229059-25229096)
chr5 (179-216)||(25293215-25293252)
chr5 (179-216)||(26172880-26172917)
chr5 (179-216)||(26665784-26665821)
chr5 (179-216)||(26937381-26937418)
chr5 (179-216)||(33409622-33409659)
chr5 (179-216)||(42805836-42805873)
chr5 (49-85)||(5888946-5888982)
chr5 (31-87)||(15236552-15236608)
chr5 (49-85)||(21565858-21565894)
chr5 (39-115)||(22410342-22410418)
chr5 (49-85)||(22959304-22959340)
chr5 (49-85)||(25744035-25744071)
[»] scaffold0080 (1 HSPs)
scaffold0080 (24-239)||(18275-18490)
[»] chr8 (73 HSPs)
chr8 (6-236)||(19899362-19899592)
chr8 (6-239)||(17353556-17353789)
chr8 (24-239)||(20465658-20465873)
chr8 (22-239)||(16185011-16185228)
chr8 (6-239)||(21168340-21168573)
chr8 (28-239)||(23776452-23776664)
chr8 (1-219)||(21389091-21389309)
chr8 (31-239)||(377570-377778)
chr8 (24-239)||(24756006-24756221)
chr8 (9-239)||(30642910-30643140)
chr8 (6-239)||(19976712-19976947)
chr8 (24-239)||(22010298-22010513)
chr8 (27-239)||(15602636-15602848)
chr8 (27-239)||(15611088-15611300)
chr8 (27-239)||(19259221-19259432)
chr8 (6-239)||(19983360-19983595)
chr8 (1-210)||(21395630-21395839)
chr8 (1-210)||(21790123-21790332)
chr8 (29-210)||(17926355-17926536)
chr8 (6-238)||(16409875-16410107)
chr8 (31-215)||(20856068-20856252)
chr8 (30-239)||(16860956-16861155)
chr8 (31-113)||(15538726-15538808)
chr8 (31-113)||(24433983-24434065)
chr8 (63-239)||(16411888-16412064)
chr8 (31-113)||(15532166-15532248)
chr8 (31-216)||(39094594-39094769)
chr8 (30-239)||(16231105-16231304)
chr8 (31-106)||(17828336-17828411)
chr8 (30-113)||(22028834-22028917)
chr8 (30-113)||(23834450-23834533)
chr8 (31-113)||(30308500-30308582)
chr8 (32-113)||(22113474-22113555)
chr8 (32-113)||(22134977-22135058)
chr8 (32-113)||(23846761-23846842)
chr8 (31-113)||(18619756-18619838)
chr8 (32-113)||(22166127-22166208)
chr8 (6-78)||(21161838-21161910)
chr8 (33-113)||(22045138-22045218)
chr8 (32-93)||(43252092-43252153)
chr8 (34-93)||(17055155-17055214)
chr8 (139-238)||(21161735-21161834)
chr8 (34-93)||(32598959-32599018)
chr8 (34-93)||(32605491-32605550)
chr8 (40-113)||(20527736-20527809)
chr8 (32-93)||(21972350-21972411)
chr8 (32-93)||(21976435-21976496)
chr8 (178-238)||(25362770-25362830)
chr8 (32-93)||(19278050-19278110)
chr8 (50-101)||(21918756-21918807)
chr8 (179-238)||(23252393-23252452)
chr8 (48-85)||(21249695-21249732)
chr8 (49-85)||(5866047-5866083)
chr8 (49-85)||(17141228-17141264)
chr8 (179-239)||(22028973-22029033)
chr8 (179-239)||(22045274-22045334)
chr8 (50-102)||(41598499-41598551)
chr8 (40-87)||(19905783-19905830)
chr8 (188-239)||(22057773-22057824)
chr8 (54-101)||(25362896-25362943)
chr8 (178-219)||(5865915-5865956)
chr8 (179-216)||(15532304-15532341)
chr8 (179-216)||(15538864-15538901)
chr8 (48-85)||(21255533-21255570)
chr8 (179-216)||(22113381-22113418)
chr8 (179-216)||(22134884-22134921)
chr8 (179-216)||(22166034-22166071)
chr8 (179-216)||(23834589-23834626)
chr8 (179-216)||(24433890-24433927)
chr8 (179-216)||(32599094-32599131)
chr8 (179-216)||(32605626-32605663)
chr8 (50-102)||(22875380-22875432)
chr8 (49-85)||(39834146-39834182)
[»] chr1 (53 HSPs)
chr1 (1-215)||(21714812-21715026)
chr1 (6-239)||(42864830-42865063)
chr1 (1-239)||(22830997-22831235)
chr1 (6-235)||(21787665-21787894)
chr1 (6-236)||(18181743-18181973)
chr1 (6-215)||(22468339-22468548)
chr1 (1-231)||(6152117-6152347)
chr1 (24-239)||(21022923-21023138)
chr1 (29-239)||(3472545-3472755)
chr1 (44-239)||(22432402-22432597)
chr1 (30-239)||(36818938-36819137)
chr1 (31-211)||(8761280-8761460)
chr1 (30-239)||(21305591-21305790)
chr1 (31-216)||(12647147-12647322)
chr1 (30-106)||(16080197-16080273)
chr1 (31-218)||(45489394-45489571)
chr1 (32-238)||(20228440-20228636)
chr1 (30-216)||(33797810-33797986)
chr1 (31-113)||(46975745-46975827)
chr1 (30-103)||(17678343-17678416)
chr1 (31-216)||(18882645-18882820)
chr1 (6-102)||(20091229-20091325)
chr1 (30-216)||(19212144-19212320)
chr1 (32-106)||(23819052-23819126)
chr1 (30-239)||(24782730-24782929)
chr1 (34-113)||(20138364-20138443)
chr1 (24-87)||(22449037-22449100)
chr1 (31-219)||(45310016-45310194)
chr1 (34-93)||(21615718-21615777)
chr1 (32-93)||(16375223-16375284)
chr1 (32-93)||(21407635-21407696)
chr1 (32-93)||(52639821-52639882)
chr1 (35-113)||(33049833-33049911)
chr1 (40-113)||(21438081-21438154)
chr1 (40-113)||(23763498-23763571)
chr1 (31-219)||(18393613-18393791)
chr1 (48-88)||(21162078-21162118)
chr1 (40-113)||(19063807-19063880)
chr1 (40-113)||(19111697-19111770)
chr1 (50-102)||(433322-433374)
chr1 (49-85)||(20918916-20918952)
chr1 (45-85)||(21754346-21754386)
chr1 (178-218)||(38801041-38801081)
chr1 (40-87)||(19105040-19105087)
chr1 (51-85)||(33681325-33681359)
chr1 (179-216)||(20138499-20138536)
chr1 (42-87)||(20524987-20525032)
chr1 (179-216)||(21615853-21615890)
chr1 (178-219)||(21754477-21754518)
chr1 (31-87)||(1011001-1011057)
chr1 (179-239)||(16080074-16080134)
chr1 (49-85)||(20637164-20637200)
chr1 (50-102)||(50209967-50210019)
[»] scaffold0131 (1 HSPs)
scaffold0131 (1-215)||(36720-36934)
[»] scaffold0101 (1 HSPs)
scaffold0101 (6-239)||(8576-8809)
[»] scaffold0004 (3 HSPs)
scaffold0004 (6-215)||(70063-70272)
scaffold0004 (30-239)||(10214-10413)
scaffold0004 (40-113)||(58164-58237)
[»] chr3 (96 HSPs)
chr3 (22-239)||(12173068-12173285)
chr3 (1-239)||(15060553-15060791)
chr3 (6-215)||(15877471-15877680)
chr3 (24-239)||(16369692-16369907)
chr3 (27-239)||(12496542-12496754)
chr3 (24-239)||(856420-856635)
chr3 (6-239)||(14878124-14878357)
chr3 (6-215)||(23408699-23408907)
chr3 (27-239)||(322876-323088)
chr3 (27-239)||(18383536-18383748)
chr3 (24-235)||(26190632-26190843)
chr3 (1-239)||(15051777-15052015)
chr3 (29-239)||(11298148-11298358)
chr3 (24-215)||(12037596-12037787)
chr3 (6-239)||(23077097-23077330)
chr3 (9-239)||(19725531-19725761)
chr3 (22-239)||(23052696-23052913)
chr3 (9-236)||(11851842-11852067)
chr3 (83-238)||(17524794-17524949)
chr3 (31-239)||(326794-326992)
chr3 (83-238)||(321634-321789)
chr3 (30-239)||(7792976-7793175)
chr3 (30-239)||(15482939-15483138)
chr3 (30-235)||(15849719-15849914)
chr3 (30-239)||(20461130-20461329)
chr3 (9-165)||(11863060-11863215)
chr3 (33-219)||(1982460-1982636)
chr3 (31-113)||(1598226-1598308)
chr3 (31-216)||(17242250-17242425)
chr3 (30-239)||(31097184-31097383)
chr3 (31-113)||(38814662-38814744)
chr3 (30-113)||(16797800-16797883)
chr3 (37-239)||(3402585-3402777)
chr3 (30-113)||(16808627-16808710)
chr3 (31-105)||(15941658-15941732)
chr3 (31-219)||(11594789-11594967)
chr3 (24-95)||(16910034-16910105)
chr3 (31-216)||(3833952-3834127)
chr3 (31-113)||(11300257-11300339)
chr3 (30-113)||(2897569-2897652)
chr3 (31-113)||(42326222-42326304)
chr3 (32-113)||(16697071-16697152)
chr3 (32-113)||(16690498-16690579)
chr3 (40-113)||(20723288-20723361)
chr3 (32-93)||(7109981-7110042)
chr3 (32-93)||(7113916-7113977)
chr3 (32-105)||(11855015-11855088)
chr3 (32-93)||(22337002-22337063)
chr3 (32-93)||(27409409-27409470)
chr3 (35-111)||(11557132-11557208)
chr3 (32-93)||(15617656-15617717)
chr3 (32-93)||(22321947-22322008)
chr3 (40-113)||(24188064-24188137)
chr3 (31-113)||(55149256-55149338)
chr3 (32-93)||(28950007-28950068)
chr3 (6-59)||(17524951-17525004)
chr3 (40-90)||(839533-839583)
chr3 (60-113)||(16862926-16862979)
chr3 (40-85)||(28350935-28350980)
chr3 (31-75)||(3389719-3389763)
chr3 (124-215)||(3389600-3389691)
chr3 (46-85)||(12340064-12340103)
chr3 (45-85)||(1644453-1644493)
chr3 (45-85)||(12852134-12852174)
chr3 (45-85)||(13210098-13210138)
chr3 (179-219)||(16690635-16690675)
chr3 (179-219)||(16697208-16697248)
chr3 (50-102)||(17248040-17248092)
chr3 (174-214)||(30030266-30030306)
chr3 (45-85)||(32307979-32308019)
chr3 (45-85)||(49667854-49667894)
chr3 (46-85)||(14665917-14665956)
chr3 (46-85)||(14669072-14669111)
chr3 (46-85)||(14735430-14735469)
chr3 (50-101)||(20698192-20698243)
chr3 (50-101)||(26687201-26687252)
chr3 (50-85)||(30030153-30030188)
chr3 (174-220)||(20698084-20698130)
chr3 (178-215)||(4588457-4588494)
chr3 (48-93)||(7986001-7986046)
chr3 (178-215)||(12340194-12340231)
chr3 (178-219)||(13209966-13210007)
chr3 (178-219)||(14179764-14179805)
chr3 (178-215)||(14666047-14666084)
chr3 (178-215)||(14669202-14669239)
chr3 (178-215)||(14735560-14735597)
chr3 (179-216)||(15941557-15941594)
chr3 (40-113)||(16333460-16333532)
chr3 (179-216)||(16797707-16797744)
chr3 (60-101)||(16809724-16809765)
chr3 (178-239)||(17674194-17674255)
chr3 (179-216)||(38814800-38814837)
chr3 (31-87)||(11165301-11165357)
chr3 (125-217)||(11557037-11557129)
chr3 (45-85)||(12934081-12934121)
chr3 (31-87)||(30066227-30066283)
[»] scaffold0671 (1 HSPs)
scaffold0671 (6-239)||(6370-6603)
[»] scaffold0042 (6 HSPs)
scaffold0042 (2-239)||(34529-34766)
scaffold0042 (6-230)||(41181-41405)
scaffold0042 (31-113)||(64131-64213)
scaffold0042 (31-113)||(76015-76097)
scaffold0042 (179-216)||(64269-64306)
scaffold0042 (179-216)||(76153-76190)
[»] chr6 (81 HSPs)
chr6 (2-215)||(19863243-19863456)
chr6 (6-220)||(22432519-22432733)
chr6 (6-239)||(25641802-25642035)
chr6 (1-239)||(21739641-21739879)
chr6 (6-220)||(22439069-22439283)
chr6 (9-239)||(21834509-21834739)
chr6 (27-239)||(16523022-16523234)
chr6 (1-239)||(18907370-18907609)
chr6 (24-205)||(22059396-22059577)
chr6 (30-215)||(18180780-18180965)
chr6 (24-239)||(15041169-15041384)
chr6 (30-239)||(17804474-17804673)
chr6 (1-211)||(16964957-16965167)
chr6 (30-239)||(22429660-22429859)
chr6 (1-211)||(16924526-16924736)
chr6 (6-100)||(19873389-19873483)
chr6 (31-216)||(5616467-5616642)
chr6 (31-113)||(12496586-12496668)
chr6 (50-214)||(22405709-22405873)
chr6 (31-113)||(12706966-12707048)
chr6 (30-215)||(27415596-27415771)
chr6 (32-113)||(1587477-1587558)
chr6 (31-216)||(19663046-19663221)
chr6 (35-113)||(22592550-22592628)
chr6 (31-239)||(1644983-1645181)
chr6 (31-95)||(16741484-16741548)
chr6 (6-102)||(22334647-22334743)
chr6 (35-219)||(19790429-19790603)
chr6 (31-219)||(23657070-23657248)
chr6 (32-113)||(27567355-27567436)
chr6 (35-106)||(20803306-20803377)
chr6 (34-113)||(21702568-21702647)
chr6 (31-113)||(14472548-14472630)
chr6 (31-113)||(18955509-18955591)
chr6 (31-219)||(20907631-20907809)
chr6 (31-211)||(27553265-27553435)
chr6 (32-239)||(9481923-9482120)
chr6 (30-113)||(25766914-25766997)
chr6 (24-102)||(15894185-15894263)
chr6 (31-93)||(22863224-22863286)
chr6 (39-93)||(25135438-25135492)
chr6 (32-93)||(8244140-8244201)
chr6 (32-93)||(11567142-11567203)
chr6 (32-93)||(19870870-19870931)
chr6 (32-93)||(23395348-23395409)
chr6 (31-211)||(16929242-16929421)
chr6 (32-93)||(12618610-12618671)
chr6 (32-113)||(18917012-18917093)
chr6 (32-93)||(23990200-23990261)
chr6 (1-94)||(31164611-31164704)
chr6 (40-91)||(25928584-25928635)
chr6 (49-101)||(18821575-18821627)
chr6 (179-239)||(20803182-20803242)
chr6 (46-85)||(21939695-21939734)
chr6 (40-90)||(34369742-34369792)
chr6 (45-102)||(29808638-29808695)
chr6 (179-239)||(25766798-25766858)
chr6 (45-85)||(28496244-28496284)
chr6 (40-87)||(16372146-16372193)
chr6 (50-101)||(20360716-20360767)
chr6 (40-87)||(22331727-22331774)
chr6 (49-88)||(31155166-31155205)
chr6 (79-113)||(2685087-2685121)
chr6 (177-219)||(22831932-22831974)
chr6 (49-99)||(25603143-25603193)
chr6 (49-99)||(25611481-25611531)
chr6 (50-88)||(25629123-25629161)
chr6 (41-87)||(34298395-34298441)
chr6 (178-219)||(1561745-1561786)
chr6 (179-216)||(1587384-1587421)
chr6 (179-216)||(2684994-2685031)
chr6 (179-216)||(12707104-12707141)
chr6 (178-215)||(15894072-15894109)
chr6 (179-216)||(16741623-16741660)
chr6 (178-219)||(16920282-16920323)
chr6 (179-216)||(21702703-21702740)
chr6 (178-215)||(25611365-25611402)
chr6 (49-85)||(4185594-4185630)
chr6 (49-85)||(4667984-4668020)
chr6 (49-85)||(22080508-22080544)
chr6 (178-214)||(22334525-22334561)
[»] scaffold0021 (2 HSPs)
scaffold0021 (1-215)||(175029-175243)
scaffold0021 (50-101)||(124899-124950)
[»] scaffold0043 (2 HSPs)
scaffold0043 (6-239)||(18507-18740)
scaffold0043 (32-113)||(76917-76998)
[»] scaffold0111 (2 HSPs)
scaffold0111 (6-206)||(32701-32901)
scaffold0111 (32-93)||(8778-8839)
[»] scaffold0139 (1 HSPs)
scaffold0139 (1-220)||(20245-20464)
[»] scaffold0029 (3 HSPs)
scaffold0029 (24-239)||(13043-13258)
scaffold0029 (32-93)||(61378-61439)
scaffold0029 (39-93)||(65294-65348)
[»] scaffold0311 (1 HSPs)
scaffold0311 (1-239)||(6697-6935)
[»] scaffold0102 (2 HSPs)
scaffold0102 (2-215)||(48103-48316)
scaffold0102 (51-85)||(19582-19616)
[»] scaffold0081 (3 HSPs)
scaffold0081 (6-239)||(14939-15171)
scaffold0081 (6-239)||(23954-24189)
scaffold0081 (6-239)||(39378-39613)
[»] scaffold0393 (1 HSPs)
scaffold0393 (27-239)||(1778-1990)
[»] scaffold0056 (1 HSPs)
scaffold0056 (24-239)||(13696-13911)
[»] scaffold0174 (1 HSPs)
scaffold0174 (6-239)||(18072-18305)
[»] scaffold0031 (2 HSPs)
scaffold0031 (6-239)||(65412-65645)
scaffold0031 (30-239)||(53842-54041)
[»] scaffold1124 (1 HSPs)
scaffold1124 (24-239)||(2161-2376)
[»] scaffold0615 (1 HSPs)
scaffold0615 (24-239)||(1703-1918)
[»] scaffold0158 (2 HSPs)
scaffold0158 (28-239)||(3128-3339)
scaffold0158 (28-239)||(6794-7005)
[»] scaffold0261 (2 HSPs)
scaffold0261 (6-244)||(1607-1845)
scaffold0261 (49-85)||(15973-16009)
[»] scaffold0096 (1 HSPs)
scaffold0096 (6-239)||(15968-16201)
[»] scaffold0676 (1 HSPs)
scaffold0676 (24-239)||(4712-4927)
[»] scaffold0114 (1 HSPs)
scaffold0114 (24-238)||(7575-7789)
[»] scaffold1296 (1 HSPs)
scaffold1296 (9-238)||(660-889)
[»] scaffold0476 (2 HSPs)
scaffold0476 (29-238)||(5872-6081)
scaffold0476 (29-238)||(7067-7276)
[»] scaffold0412 (1 HSPs)
scaffold0412 (13-236)||(6038-6261)
[»] scaffold0297 (2 HSPs)
scaffold0297 (6-239)||(15298-15521)
scaffold0297 (126-239)||(10440-10553)
[»] scaffold0761 (1 HSPs)
scaffold0761 (22-215)||(5952-6145)
[»] scaffold0035 (1 HSPs)
scaffold0035 (6-239)||(46346-46579)
[»] scaffold0023 (3 HSPs)
scaffold0023 (24-237)||(23288-23501)
scaffold0023 (69-239)||(38119-38289)
scaffold0023 (6-54)||(38283-38331)
[»] scaffold0425 (1 HSPs)
scaffold0425 (22-239)||(440-657)
[»] scaffold0216 (1 HSPs)
scaffold0216 (30-239)||(16740-16949)
[»] scaffold0198 (1 HSPs)
scaffold0198 (44-215)||(26706-26877)
[»] scaffold1895 (2 HSPs)
scaffold1895 (69-239)||(867-1037)
scaffold1895 (6-54)||(1031-1079)
[»] scaffold0037 (2 HSPs)
scaffold0037 (9-239)||(21188-21418)
scaffold0037 (48-85)||(80102-80139)
[»] scaffold0367 (1 HSPs)
scaffold0367 (6-239)||(1160-1393)
[»] scaffold0220 (1 HSPs)
scaffold0220 (6-239)||(4552-4785)
[»] scaffold0008 (3 HSPs)
scaffold0008 (30-239)||(30364-30573)
scaffold0008 (34-93)||(2157-2216)
scaffold0008 (179-216)||(2292-2329)
[»] scaffold0149 (4 HSPs)
scaffold0149 (9-165)||(4011-4167)
scaffold0149 (9-165)||(8442-8598)
scaffold0149 (201-239)||(4181-4219)
scaffold0149 (201-239)||(8612-8650)
[»] scaffold0017 (5 HSPs)
scaffold0017 (37-222)||(190917-191102)
scaffold0017 (30-222)||(192620-192812)
scaffold0017 (32-113)||(56376-56457)
scaffold0017 (126-219)||(14963-15056)
scaffold0017 (126-219)||(19485-19578)
[»] scaffold0327 (1 HSPs)
scaffold0327 (29-239)||(566-766)
[»] scaffold0346 (1 HSPs)
scaffold0346 (30-146)||(15374-15490)
[»] scaffold0104 (2 HSPs)
scaffold0104 (35-239)||(2122-2325)
scaffold0104 (35-239)||(9804-10007)
[»] scaffold0228 (4 HSPs)
scaffold0228 (30-239)||(18262-18461)
scaffold0228 (50-102)||(4822-4874)
scaffold0228 (50-102)||(12404-12456)
scaffold0228 (50-102)||(22356-22408)
[»] scaffold0044 (3 HSPs)
scaffold0044 (30-239)||(19465-19664)
scaffold0044 (30-113)||(13181-13264)
scaffold0044 (34-93)||(62541-62600)
[»] scaffold0036 (2 HSPs)
scaffold0036 (30-239)||(66045-66244)
scaffold0036 (72-239)||(71186-71343)
[»] scaffold0020 (1 HSPs)
scaffold0020 (61-215)||(178974-179128)
[»] scaffold1326 (1 HSPs)
scaffold1326 (24-239)||(1119-1324)
[»] scaffold0070 (1 HSPs)
scaffold0070 (31-216)||(10181-10356)
[»] scaffold0001 (2 HSPs)
scaffold0001 (30-239)||(173567-173766)
scaffold0001 (31-105)||(422285-422359)
[»] scaffold0171 (1 HSPs)
scaffold0171 (31-239)||(35140-35338)
[»] scaffold0120 (3 HSPs)
scaffold0120 (31-239)||(19647-19845)
scaffold0120 (174-215)||(32601-32642)
scaffold0120 (174-215)||(46363-46404)
[»] scaffold0009 (1 HSPs)
scaffold0009 (30-113)||(228119-228202)
[»] scaffold0003 (5 HSPs)
scaffold0003 (30-113)||(96883-96966)
scaffold0003 (30-215)||(71590-71765)
scaffold0003 (31-216)||(139988-140163)
scaffold0003 (35-106)||(413803-413874)
scaffold0003 (50-102)||(339705-339757)
[»] scaffold1461 (2 HSPs)
scaffold1461 (31-113)||(207-289)
scaffold1461 (179-216)||(345-382)
[»] scaffold0280 (1 HSPs)
scaffold0280 (30-215)||(18945-19120)
[»] scaffold0107 (1 HSPs)
scaffold0107 (30-215)||(15072-15247)
[»] scaffold0193 (2 HSPs)
scaffold0193 (34-113)||(9701-9780)
scaffold0193 (179-216)||(9836-9873)
[»] scaffold0079 (1 HSPs)
scaffold0079 (80-239)||(44391-44550)
[»] scaffold0013 (3 HSPs)
scaffold0013 (30-113)||(2419-2502)
scaffold0013 (40-93)||(9627-9680)
scaffold0013 (189-238)||(2304-2353)
[»] scaffold0483 (1 HSPs)
scaffold0483 (30-239)||(608-807)
[»] scaffold0109 (6 HSPs)
scaffold0109 (30-239)||(45395-45594)
scaffold0109 (31-105)||(7222-7296)
scaffold0109 (32-93)||(11068-11129)
scaffold0109 (32-114)||(38564-38646)
scaffold0109 (179-216)||(10955-10992)
scaffold0109 (179-216)||(38472-38509)
[»] scaffold0012 (1 HSPs)
scaffold0012 (31-113)||(24714-24796)
[»] scaffold0177 (1 HSPs)
scaffold0177 (30-106)||(13240-13316)
[»] scaffold0168 (1 HSPs)
scaffold0168 (30-106)||(3283-3359)
[»] scaffold0410 (1 HSPs)
scaffold0410 (31-113)||(11658-11740)
[»] scaffold0132 (2 HSPs)
scaffold0132 (31-113)||(36583-36665)
scaffold0132 (179-215)||(36721-36757)
[»] scaffold0130 (1 HSPs)
scaffold0130 (31-113)||(5746-5828)
[»] scaffold0010 (4 HSPs)
scaffold0010 (31-113)||(23494-23576)
scaffold0010 (40-113)||(242344-242417)
scaffold0010 (49-85)||(130221-130257)
scaffold0010 (179-216)||(23632-23669)
[»] scaffold1220 (2 HSPs)
scaffold1220 (30-95)||(2079-2144)
scaffold1220 (127-239)||(2165-2277)
[»] scaffold0585 (1 HSPs)
scaffold0585 (32-113)||(9613-9694)
[»] scaffold0064 (2 HSPs)
scaffold0064 (123-239)||(64282-64398)
scaffold0064 (174-219)||(47413-47458)
[»] scaffold1552 (1 HSPs)
scaffold1552 (35-113)||(635-713)
[»] scaffold0439 (3 HSPs)
scaffold0439 (31-220)||(2084-2263)
scaffold0439 (31-93)||(10061-10123)
scaffold0439 (124-220)||(9944-10040)
[»] scaffold0184 (1 HSPs)
scaffold0184 (31-219)||(3874-4052)
[»] scaffold0555 (2 HSPs)
scaffold0555 (6-102)||(849-945)
scaffold0555 (178-219)||(1021-1062)
[»] scaffold0284 (1 HSPs)
scaffold0284 (32-239)||(18633-18830)
[»] scaffold0637 (1 HSPs)
scaffold0637 (31-113)||(8849-8931)
[»] scaffold0546 (3 HSPs)
scaffold0546 (31-105)||(6011-6085)
scaffold0546 (32-93)||(2178-2239)
scaffold0546 (179-216)||(2315-2352)
[»] scaffold0372 (1 HSPs)
scaffold0372 (32-93)||(4867-4928)
[»] scaffold0015 (1 HSPs)
scaffold0015 (31-219)||(191966-192144)
[»] scaffold0371 (2 HSPs)
scaffold0371 (34-114)||(15618-15698)
scaffold0371 (179-216)||(15759-15796)
[»] scaffold0342 (1 HSPs)
scaffold0342 (31-87)||(7042-7098)
[»] scaffold0167 (1 HSPs)
scaffold0167 (144-215)||(36034-36105)
[»] scaffold0334 (2 HSPs)
scaffold0334 (39-113)||(18106-18180)
scaffold0334 (179-216)||(18013-18050)
[»] scaffold0028 (2 HSPs)
scaffold0028 (32-93)||(58484-58545)
scaffold0028 (45-85)||(132963-133003)
[»] scaffold0034 (1 HSPs)
scaffold0034 (34-93)||(16429-16488)
[»] scaffold0484 (1 HSPs)
scaffold0484 (178-239)||(1345-1406)
[»] scaffold0165 (4 HSPs)
scaffold0165 (178-239)||(3912-3973)
scaffold0165 (178-239)||(7976-8037)
scaffold0165 (50-101)||(3795-3846)
scaffold0165 (50-101)||(7859-7910)
[»] scaffold0138 (1 HSPs)
scaffold0138 (40-93)||(29973-30026)
[»] scaffold0259 (1 HSPs)
scaffold0259 (40-93)||(10464-10517)
[»] scaffold0233 (1 HSPs)
scaffold0233 (40-93)||(14306-14359)
[»] scaffold0192 (2 HSPs)
scaffold0192 (45-85)||(10221-10261)
scaffold0192 (178-215)||(10352-10389)
[»] scaffold0124 (1 HSPs)
scaffold0124 (45-85)||(24421-24461)
[»] scaffold1048 (1 HSPs)
scaffold1048 (124-219)||(1798-1893)
[»] scaffold0347 (1 HSPs)
scaffold0347 (46-85)||(340-379)
[»] scaffold0075 (2 HSPs)
scaffold0075 (46-85)||(8064-8103)
scaffold0075 (178-215)||(7936-7973)
[»] scaffold0016 (2 HSPs)
scaffold0016 (46-85)||(207289-207328)
scaffold0016 (178-216)||(207160-207198)
[»] scaffold0718 (1 HSPs)
scaffold0718 (178-219)||(4780-4821)
[»] scaffold0490 (1 HSPs)
scaffold0490 (178-219)||(2383-2424)
[»] scaffold0405 (1 HSPs)
scaffold0405 (179-239)||(9322-9382)
[»] scaffold0358 (2 HSPs)
scaffold0358 (53-101)||(253-301)
scaffold0358 (53-101)||(5029-5077)
[»] scaffold0309 (1 HSPs)
scaffold0309 (178-218)||(7041-7081)
[»] scaffold0305 (1 HSPs)
scaffold0305 (49-101)||(20716-20768)
[»] scaffold0211 (1 HSPs)
scaffold0211 (45-85)||(28580-28620)
[»] scaffold0161 (1 HSPs)
scaffold0161 (49-85)||(2215-2251)
[»] scaffold0142 (2 HSPs)
scaffold0142 (45-85)||(7541-7581)
scaffold0142 (50-85)||(17095-17130)
[»] scaffold0026 (2 HSPs)
scaffold0026 (49-85)||(59273-59309)
scaffold0026 (52-88)||(40173-40209)
[»] scaffold1984 (1 HSPs)
scaffold1984 (50-85)||(445-480)
[»] scaffold1842 (1 HSPs)
scaffold1842 (50-101)||(805-856)
[»] scaffold0451 (1 HSPs)
scaffold0451 (188-239)||(11430-11481)
[»] scaffold0292 (1 HSPs)
scaffold0292 (50-101)||(3784-3835)
[»] scaffold0221 (1 HSPs)
scaffold0221 (46-85)||(12579-12618)
[»] scaffold0217 (1 HSPs)
scaffold0217 (50-85)||(16371-16406)
[»] scaffold0175 (3 HSPs)
scaffold0175 (50-101)||(13406-13457)
scaffold0175 (51-85)||(34437-34471)
scaffold0175 (178-219)||(34562-34603)
[»] scaffold0166 (1 HSPs)
scaffold0166 (46-85)||(9604-9643)
[»] scaffold0113 (2 HSPs)
scaffold0113 (50-101)||(32378-32429)
scaffold0113 (178-219)||(32495-32536)
[»] scaffold0011 (2 HSPs)
scaffold0011 (50-101)||(52226-52277)
scaffold0011 (50-101)||(167735-167786)
[»] scaffold0051 (1 HSPs)
scaffold0051 (40-90)||(36994-37044)
[»] scaffold0839 (1 HSPs)
scaffold0839 (50-83)||(1850-1883)
[»] scaffold0772 (1 HSPs)
scaffold0772 (179-236)||(6432-6489)
[»] scaffold0598 (1 HSPs)
scaffold0598 (178-219)||(701-742)
[»] scaffold0427 (2 HSPs)
scaffold0427 (178-219)||(13926-13967)
scaffold0427 (49-85)||(13808-13844)
[»] scaffold0423 (1 HSPs)
scaffold0423 (178-219)||(10910-10951)
[»] scaffold0285 (1 HSPs)
scaffold0285 (179-216)||(12169-12206)
[»] scaffold0256 (1 HSPs)
scaffold0256 (44-93)||(24741-24790)
[»] scaffold0145 (1 HSPs)
scaffold0145 (50-99)||(39075-39124)
[»] scaffold1137 (2 HSPs)
scaffold1137 (179-219)||(1939-1979)
scaffold1137 (45-85)||(2072-2112)
[»] scaffold0628 (1 HSPs)
scaffold0628 (45-85)||(2573-2613)
[»] scaffold0525 (1 HSPs)
scaffold0525 (31-87)||(3648-3704)
[»] scaffold0475 (1 HSPs)
scaffold0475 (49-85)||(9390-9426)
[»] scaffold0413 (1 HSPs)
scaffold0413 (50-102)||(15369-15421)
[»] scaffold0150 (1 HSPs)
scaffold0150 (45-85)||(32393-32433)
[»] scaffold0125 (1 HSPs)
scaffold0125 (49-85)||(45561-45597)


Alignment Details
Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 40622057 - 40621827
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40622057 acagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaag 40621958  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||| ||||||||||||| ||||||||    
T  40621957 ttgttctaagctataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatccttagacactcaaaaacatctaaggttcaactcaaaa 40621858  T
Q  209 gtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| ||| ||| ||||||||||||    
T  40621857 gtcaaaaatatagaattcaacatgctctctg 40621827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 22798978 - 22798769
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22798978 gacacagatcgcaatatcctaacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacta 22798879  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||| |||| ||| ||| |||||||||||||||||||||||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||    
T  22798878 aagctgttctaagctaaaccaggttcaatctcgttctaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactca 22798779  T
Q  206 aaagtcaaaa 215  Q
    ||||||||||    
T  22798778 aaagtcaaaa 22798769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 45677989 - 45677774
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |    
T  45677989 ctcaattgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 45677890  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| ||||||||||||||||||||||     
T  45677889 ccaggttcaatctcactctaagtcatcatctaatctttaataatcatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaa 45677790  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  45677789 ttcaacatgctctctg 45677774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 22740812 - 22740579
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |    
T  22740812 gacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagttcaagccagattcccaacaa 22740713  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||    
T  22740712 aggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactca 22740613  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||| ||| |||| | |  |||||||||||||    
T  22740612 aaagtccaaactacataatcttacatgctctctg 22740579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 24673843 - 24674076
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||| ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  24673843 gacacagatcgcaacatcctaacttgcattcagttgtggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagccagattcccaacta 24673942  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| ||||| |||||||||||||||| ||||  |||||  || |||| |||| |||||||||||| |||||    
T  24673943 atgttgttctaagctaaaccaggttcaatctcattctaggttatcatttaatcttcaataaacatcttaaggcacttaaaggcatctaaggttcaactca 24674042  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||| ||||||||||||    
T  24674043 aaagtcaaaaatacagaattcaacatgctctctg 24674076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 23019558 - 23019328
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  23019558 gacacagatcgcaatatcctgacttgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcaagtacaagccagattcccaacta 23019459  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||| ||||||| |||||    
T  23019458 aagttgttctaacctagaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaacacatcgaaggttcaactca 23019359  T
Q  206 aaagtcaaaaatacagatttctacatgctct 236  Q
    ||||||||| |||||||  |||||| |||||    
T  23019358 aaagtcaaacatacagaaatctacaagctct 23019328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 23038297 - 23038511
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  23038297 catgcgacacagatcgcaatttcctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgggtacaagccagattccc 23038396  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| |  |||||| ||   || ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||  |||||||||||||     
T  23038397 aacaatggttgttctagcttaaaccaggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaacaacatctaaggttca 23038496  T
Q  201 actcaaaagtcaaaa 215  Q
     ||||||||||||||    
T  23038497 tctcaaaagtcaaaa 23038511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 2 - 239
Target Start/End: Original strand, 37524927 - 37525164
Alignment:
Q  2 atgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||| ||||||||||   | || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  37524927 atgtgaaacagatcgcaacatactaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattcca 37525026  T
Q  102 actaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttcta 201  Q
    ||| |||||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||  |    
T  37525027 acttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggtttaa 37525126  T
Q  202 ctcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||| |||||| ||| ||||||||||||    
T  37525127 ctcaaaagtcaaaattacagaattcaacatgctctctg 37525164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 21918165 - 21917935
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |    
T  21918165 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaagg 21918066  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    |||||  || ||| |||||||||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||  ||||||||    
T  21918065 ttgttcaaagctaaaccaggttcaatctagttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttaaactcaaaa 21917966  T
Q  209 gtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||| |||||| ||| ||||||||||||    
T  21917965 gtcaaaattacagaattcaacatgctctctg 21917935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 25963548 - 25963336
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||    
T  25963548 acttgcattcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaacca 25963449  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    ||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  25963448 ggttcaatctcattctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 25963349  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  25963348 aacatgctctctg 25963336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 22758567 - 22758334
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  22758567 gacacagatcgcaatatcctcacttgcactcagttctgaaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 22758468  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   || || ||||| || || ||||||||||||||| ||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||    
T  22758467 aggttgttctaggttaaactaggttgaagcttgttctaagttatcatgtaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactca 22758368  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||| ||| |||| | |  |||||||||||||    
T  22758367 aaagtccaaactacataatcttacatgctctctg 22758334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 23101087 - 23100873
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  23101087 catgcgacatagatcgcattatcctcacttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgattacaagctagattccc 23100988  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    |||    |||||| ||   || ||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||| |||| ||| |||||| ||||||     
T  23100987 aacagtggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatttttaataagcatcttcaggcacttaaaaacatctgaggttca 23100888  T
Q  201 actcaaaagtcaaaa 215  Q
    |||||||||||||||    
T  23100887 actcaaaagtcaaaa 23100873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 44370133 - 44369952
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | | |||| |||||| ||| ||| |    
T  44370133 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattcaacctaatgttgttctaagctaaa 44370034  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||||||||||||| ||||||| | || || ||||||||||||||||||| ||| |||||||| ||||||||||||| |||||    
T  44370033 ccaggttcaatcttgttctaaatcattatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactca 44369952  T

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Target: chr2; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 22461018 - 22460936
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22461018 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 22460936  T

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Target: chr2; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 79 - 239
Target Start/End: Complemental strand, 22811713 - 22811553
Alignment:
Q  79 ggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagac 178  Q
    |||||||||||||||||||||||||||| |||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || |    
T  22811713 ggcgagtacaagccagaatcccaactaaggttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggc 22811614  T
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||  || ||||||||| ||||||||||||||| |||| | ||  ||||||||||||    
T  22811613 actcaaaagcacctaaggttcaactcaaaagtcaaaattacaaaatttaacatgctctctg 22811553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 21327393 - 21327196
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 131  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| || |||          ||||||||    
T  21327393 cactcagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccagaattcgaactaaggtcgtt----------ccaggttc 21327304  T
Q  132 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 231  Q
     |||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| |||| || |||||||||||||||||| ||||    
T  21327303 catcttgttctaagtcatcctctaatctttagtgaacatctaaaggtactcaaaagcatctaaggttcaactcgaaggtcaaaaatacagatttcgacat 21327204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 24735680 - 24735879
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  24735680 tgcaatcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 24735769  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||| ||| | ||| | ||||||||| ||  || ||  ||  ||| |||| |||||||||||| ||||||||||||||||  || | ||| ||    
T  24735770 tcaatcttgttataaatcatcctctaatctttagtagacacctaaaggtactgaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgac 24735869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 21318462 - 21318265
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 131  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||| ||||||          ||||||||    
T  21318462 cacttagttctgggagtgctcgcgaggcgagtgcatctgctcgccatggcgagtacaagccagaattcgaactaaggttgtt----------ccaggttc 21318373  T
Q  132 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 231  Q
     |||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| |||| || |||||||||||||||||| ||||    
T  21318372 catcttgttctaagtcatcctctaatctttactgaacatctaaaggtactcaaaagcatctaaggttcaactcgaaggtcaaaaatacagatttcgacat 21318273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 211
Target Start/End: Complemental strand, 24716365 - 24716188
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| |||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   | | ||       |||     
T  24716365 ctcaattgcactcggctctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac---attggt-------tatt 24716276  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 211  Q
    ||||||||||||||||| ||||| ||| | ||||||||||||  |||||  || |||||||| |||||||||||||  ||||||||||    
T  24716275 ccaggttcaatctcgttttaagtcatcctctaatctttaataaacatcttaaggcactcaaaaacatctaaggttcatctcaaaagtc 24716188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 32 - 106
Target Start/End: Original strand, 15477883 - 15477957
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  15477883 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaa 15477957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 18855289 - 18855207
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||    
T  18855289 gcactcagttctggaagtgctcacgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgtt 18855207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 23187353 - 23187435
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| ||||||    
T  23187353 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgtt 23187435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 23598616 - 23598791
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||||||| |||||| ||          ||||    
T  23598616 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtataagccagaattccaactaaggttgttcta----------ggtt 23598705  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  23598706 caatctcgttctaaatcattttctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 23598791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 61094 - 61175
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  61094 cactcagttctggaagtgctcgcgaggcgggagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 61175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 19928329 - 19928248
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||    
T  19928329 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccgactaaggttgtt 19928248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 24175093 - 24175267
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||||||    
T  24175093 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggttcaat 24175182  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    || ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  24175183 cttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 24175267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 35 - 218
Target Start/End: Complemental strand, 24655162 - 24654989
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||    
T  24655162 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ccaggttcaat 24655073  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 218  Q
    || ||||||||| ||| | ||||||||||||  || |   || ||||||||  |||||||||||| ||||||||||| ||||||    
T  24655072 cttgttctaagtcatcctctaatctttaatacacaacgaaaggcactcaaaagcatctaaggttcaactcaaaagtccaaaata 24654989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 40428753 - 40428929
Alignment:
Q  31 gcactcagtt-ctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||  |||||| | |||||||| ||||||          || |||    
T  40428753 gcactcagtttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacttgccagatttccaactaaggttgtt----------ccgggt 40428842  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||||||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||    
T  40428843 tcaatctcgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaa 40428929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 19688585 - 19688502
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||| | |||||||| ||||||    
T  19688585 tgcactcagttctggaagtgctcgcgatgcgagagcatctgcttgtcatggcgagtacaagccagatttccaactaaggttgtt 19688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 24658032 - 24658139
Alignment:
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    ||||||| |||||||||||||||||||| ||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||| ||| |||    
T  24658032 caatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaattcaaca 24658131  T
Q  231 tgctctct 238  Q
    ||||||||    
T  24658132 tgctctct 24658139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 25961358 - 25961287
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||    
T  25961358 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaa 25961287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 12901339 - 12901278
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12901339 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 12901278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 24649636 - 24649697
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24649636 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 24649697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 24870173 - 24870347
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          | |||||||||    
T  24870173 tcagttctggaagtgctcatgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ctaggttcaat 24870262  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    || ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  24870263 cttgttctaaatcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 24870347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 27379259 - 27379198
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27379259 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27379198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 27383305 - 27383244
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27383305 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27383244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 27602076 - 27602137
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27602076 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27602137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 26125484 - 26125543
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26125484 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcca 26125543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 41667230 - 41667289
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41667230 ctcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagcca 41667289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 24628305 - 24628244
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  24628305 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 24628244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 41530836 - 41530775
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  41530836 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacatgcca 41530775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 22811761 - 22811708
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgag 62  Q
    ||||||||||   |||| ||||||||||||||||||||||||||||||||||||    
T  22811761 acagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggcgag 22811708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Original strand, 24503402 - 24503450
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||||    
T  24503402 aagtgctcgggaggcgagagtatctactcgccatggcgagtacaagcca 24503450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 23071769 - 23071733
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  23071769 gctcgcgaggcgagagcctctgctcgccatggcgagt 23071733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 27197172 - 27197219
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||||||||||||||||||||||||   || |||||||||||||||||    
T  27197172 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 27197219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 32451736 - 32451685
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  32451736 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 32451685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Complemental strand, 22134020 - 22133986
Alignment:
Q  51 tcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||| |||||||||||||||||||    
T  22134020 tcgcgaggcgagagcctctgctcgccatggcgagt 22133986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 62
Target Start/End: Original strand, 27263552 - 27263582
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgag 62  Q
    |||||||||||||||||||||||||||||||    
T  27263552 cactcagttctggaagtgctcgcgaggcgag 27263582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 37806 - 37765
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  37806 cactcaaaagcatctaaggttccactcaaaagtcaaaaatac 37765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 19928192 - 19928155
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  19928192 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 19928155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22460880 - 22460843
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22460880 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22460843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 23187491 - 23187528
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23187491 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23187528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 23286288 - 23286329
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  23286288 cagacactcaaaagcatctaaggttcaactcaaaagtcaaaa 23286329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 26125619 - 26125656
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26125619 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26125656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 28291981 - 28291940
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  28291981 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 28291940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 41667365 - 41667402
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  41667365 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 41667402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 37924 - 37888
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  37924 gctcgcgaggcgagagcctctgctcgccgtggcgagt 37888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 10101473 - 10101417
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  10101473 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 10101417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 27753892 - 27753940
Alignment:
Q  53 gcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    ||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  27753892 gcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 27753940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 31756231 - 31756267
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  31756231 gctcgcgaggcgagagcctctactcgccatggcgagt 31756267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 172; Significance: 2e-92; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 21640 - 21425
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  21640 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 21541  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||     
T  21540 ccagattcaatctcgttctaagttatcatttaatctttactatgcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaa 21441  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  21440 ttcaacatgctctctg 21425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 29532 - 29317
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  29532 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 29433  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| ||||||||||||| ||||||||||||||||||||||     
T  29432 ccagattcaatctcgttctaagttatcatttaatctttactatgcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaa 29333  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  29332 ttcaacatgctctctg 29317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 166; Significance: 6e-89; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 15668 - 15901
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  15668 gacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacta 15767  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  || ||  || |||||||| ||||||||||||| |||||    
T  15768 atgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaccacctttaggcactcaaaaacatctaaggttcaactca 15867  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||||||||||||||||    
T  15868 aaagtcaaaaatacagaattctacatgctctctg 15901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 9 - 238
Target Start/End: Original strand, 27093 - 27322
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    |||||||||| | ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  27093 acagatcgcaatatcctcacttgcactcagttctggaaatgcttgcgaggcaagagcatctgctcgccatggcgaatacaagccagaattccaactaaag 27192  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||| ||||||||    
T  27193 ttgttctaagctataccaggttaaatctcgttctaagttatcatttaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactcaaaa 27292  T
Q  209 gtcaaaaatacagatttctacatgctctct 238  Q
    || ||||||||||| ||| |||||||||||    
T  27293 gtaaaaaatacagaattcaacatgctctct 27322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 97)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 9703534 - 9703767
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  9703534 gacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacta 9703633  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  || ||  || |||||||| ||||||||||||| |||||    
T  9703634 atgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaccacctttaggcactcaaaaacatctaaggttcaactca 9703733  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||||||||||||||||    
T  9703734 aaagtcaaaaatacagaattctacatgctctctg 9703767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 10508918 - 10508701
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||| |||  ||    
T  10508918 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagccagattcccaactaatgttgttataagtta 10508819  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 221  Q
     | ||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||    
T  10508818 aatcaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacag 10508719  T
Q  222 atttctacatgctctctg 239  Q
    | ||||||||||||||||    
T  10508718 aattctacatgctctctg 10508701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 17137897 - 17137682
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  17137897 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 17137798  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||| |||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||||||||||     
T  17137797 ccaggttcaatctcattctaagtcatcatctaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaa 17137698  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  17137697 ttcaacatgctctctg 17137682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 11880536 - 11880753
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||    
T  11880536 tcctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaatgttgttctaagcta 11880635  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 221  Q
     ||||||||||||||| |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| ||||||||||||||| |||||    
T  11880636 aaccaggttcaatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaagtacag 11880735  T
Q  222 atttctacatgctctctg 239  Q
    | ||||||||||||||||    
T  11880736 aattctacatgctctctg 11880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 18154693 - 18154479
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18154693 catgcgacacagatcgcatttccctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 18154594  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| |  |||||| ||   || |||| |||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||     
T  18154593 aacaatggttgttctaggttaaaccaagttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttca 18154494  T
Q  201 actcaaaagtcaaaa 215  Q
    |||||||||||||||    
T  18154493 actcaaaagtcaaaa 18154479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 12187299 - 12187514
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||| |    
T  12187299 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaa 12187398  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
     ||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| ||||||     
T  12187399 tcaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaactacagaa 12187498  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||| ||||||    
T  12187499 ttcaacatgttctctg 12187514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 12321576 - 12321361
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |    
T  12321576 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 12321477  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
     ||||||||||||| ||||| |||||||| ||||||||||||  |||||  || |||||||| || |||||||||| ||||||||||||||||||||||     
T  12321476 tcaggttcaatctcattctaggttatcatctaatctttaataaacatctttaggcactcaaaaacgtctaaggttcaactcaaaagtcaaaaatacagaa 12321377  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  12321376 ttcgacatgctctctg 12321361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 24054736 - 24054950
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | | ||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| |    
T  24054736 gacacagatcgcaatattctcactttcactcagttctggaagtgctcgcaagacgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 24054835  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||   || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||    
T  24054836 aagttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactca 24054935  T
Q  206 aaagtcaaaaataca 220  Q
    |||||||||| ||||    
T  24054936 aaagtcaaaactaca 24054950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 19649336 - 19649127
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |    
T  19649336 gacacagatcgcaatatcctcacttacactcggttctggaagtgctcgcgagacgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 19649237  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   || ||||||||||||||| ||||||||||||||||||| ||||||| |||||| ||| |||||||| ||||||||||||| |||||    
T  19649236 aggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatatttaataggcatcttcaggcactcaaaaacatctaaggttcaactca 19649137  T
Q  206 aaagtcaaaa 215  Q
    ||||||||||    
T  19649136 aaagtcaaaa 19649127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 14430167 - 14430379
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||| ||| ||||    
T  14430167 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaacca 14430266  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    ||||||||||| |||||| | ||||| ||||||||||||  |||||| || ||||||||  |||||||||||  ||||||||||||||| |||||| |||    
T  14430267 ggttcaatctcattctaaatcatcatctaatctttaataaacatctcaaggcactcaaaagcatctaaggtttaactcaaaagtcaaaattacagaattc 14430366  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  14430367 aacatgctctctg 14430379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 2760413 - 2760628
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | | ||||||  |||||||  || ||| |    
T  2760413 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatgacgagtacaagccatatttccaactccagttgttcgaagctaaa 2760512  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||||||||| | ||||| ||||||||| ||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||  |     
T  2760513 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaa 2760612  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  2760613 ttcaacatgctctctg 2760628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 15211759 - 15211928
Alignment:
Q  69 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 168  Q
    ||||||||||||||||||||||| ||||||||||||||||||  | | | ||| ||||||||||||||| |||||||||||||||||||| || |||  |    
T  15211759 tgctcgccatggcgagtacaagctagaatcccaactaaagttaatctgagctaaaccaggttcaatctcattctaagttatcatttaatcatttataaac 15211858  T
Q  169 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    ||||  || ||||||||  |||||||||||| ||||||||||||| | |||||| ||| |||||||||||    
T  15211859 atctttaggcactcaaaagcatctaaggttcaactcaaaagtcaagagtacagaattcaacatgctctct 15211928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 30 - 216
Target Start/End: Complemental strand, 48593285 - 48593109
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||          ||||||    
T  48593285 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggtcgtt----------ccaggt 48593196  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||| ||||||| | ||  | ||||||||| || ||| ||  ||  ||||||||||||| ||||||| ||||||||||||||||    
T  48593195 tcaatcttgttctaaatcattctctaatctttagtaggcacctaaaggtactcaaagacatccaaggttcaactcaaaagtcaaaaa 48593109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 11312925 - 11313124
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  11312925 tgcactcagttctggaagtgctcccgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 11313014  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    |||||||  ||| || | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  11313015 tcaatctttttcaaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 11313114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 16438862 - 16438779
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16438862 gcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgttt 16438779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 6801490 - 6801572
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  6801490 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgtt 6801572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 15580968 - 15581168
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||         ||||||    
T  15580968 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttt---------ccaggt 15581058  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| |||||||   ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||||||||  |||| ||| ||    
T  15581059 tcaatcttgttctaaaacatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 15581158  T
Q  230 atgctctctg 239  Q
    ||||||||||    
T  15581159 atgctctctg 15581168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 22 - 113
Target Start/End: Complemental strand, 18895 - 18804
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18895 tcctcaatagcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 18804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 11987489 - 11987572
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||    
T  11987489 tgcactcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt 11987572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 13635298 - 13635215
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||    
T  13635298 tgcactcagttctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacaagccagattcccaactaaggttgtt 13635215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 216
Target Start/End: Original strand, 13149433 - 13149607
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 131  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||||    
T  13149433 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttc 13149522  T
Q  132 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  13149523 aatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 13149607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 15728603 - 15728684
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  15728603 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 15728684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 239
Target Start/End: Original strand, 26292673 - 26292871
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          |||||||    
T  26292673 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggtt 26292762  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    ||||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||    
T  26292763 caatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgaca 26292862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 12318404 - 12318487
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  12318404 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatagcgagtacaagccagattcccaactaaggttgtt 12318487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 14217192 - 14217274
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  14217192 gcactcagttctggaagtgctcgcgaggtgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 14217274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 18557249 - 18557323
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18557249 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacta 18557323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 9593622 - 9593698
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  9593622 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaactaa 9593698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 9644585 - 9644661
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  9644585 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagatttccaactaa 9644661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 13462039 - 13462114
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  13462039 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggtgagtacaagccagaattccaactaa 13462114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 16724459 - 16724377
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||    
T  16724459 gcactcagttctgaaagtgctcgcgaggcgagagcatcagctcgccatggcgagttcaagccagaattccaactaaggttgtt 16724377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 17701473 - 17701391
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||| ||||||    
T  17701473 gcactcagttctgaaagtgctcgcgaggcgagagcatcagctcgccatggcgagttcaagccagaattccaactaaggttgtt 17701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 15605101 - 15604902
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||| || ||||||| ||||||          ||||||    
T  15605101 tgcactcagttctagaagtggtcacgaggcaagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgtt----------ccaggt 15605012  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | |||| |||| ||  || ||  ||  |||||||  |||||||||||| |||||||||||||||   |||| ||| ||    
T  15605011 tcaatcttgttctaaatcatcctctaatatttagtaaacacctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaagctcagaattcgac 15604912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 8917704 - 8917779
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| || |||||    
T  8917704 gcactcagttctggaagtgctcgcgaggcaagagcatcagctcgccattgcgagtacaagccagaattcctactaa 8917779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 9445982 - 9445904
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||| | |||||||| ||||||    
T  9445982 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactttccagatttccaactaaggttgtt 9445904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 12718948 - 12719009
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12718948 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 12719009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 12723859 - 12723920
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12723859 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 12723920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 16907027 - 16906966
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16907027 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 16906966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 18279683 - 18279744
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18279683 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 18279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 18283646 - 18283707
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  18283646 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 18283707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 16275772 - 16275851
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||   |||||||||| ||||||    
T  16275772 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcaagtacaagccaacttcccaactaaggttgtt 16275851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 20569420 - 20569342
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| |  ||||||| ||||||    
T  20569420 tcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagattttcaactaaggttgtt 20569342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 11262615 - 11262688
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  11262615 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 11262688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 11548086 - 11548013
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  11548086 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 11548013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 11554682 - 11554609
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  11554682 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 11554609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 12692782 - 12692855
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  12692782 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 12692855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 12715144 - 12715205
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  12715144 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagcca 12715205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 14953484 - 14953557
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  14953484 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 14953557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 16114521 - 16114582
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  16114521 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagcca 16114582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 16117674 - 16117735
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  16117674 cactcaattctggaagtgctcgcgaggcgagagcatttgctcgccgtggcgagtacaagcca 16117735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 93
Target Start/End: Original strand, 35151894 - 35151945
Alignment:
Q  42 tggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35151894 tggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagcca 35151945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 14959450 - 14959523
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  14959450 tctgaaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 14959523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 25039029 - 25038956
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||   |||||||||| ||||||    
T  25039029 tctggaagtgctcgcgaggcgagagtatctactcaccatggcgagtacaagccaacttcccaactaatgttgtt 25038956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 105
Target Start/End: Original strand, 42205394 - 42205466
Alignment:
Q  33 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||||||  ||||||||||||||| ||||||||||||||| ||||  |||||||| |||||||    
T  42205394 actcagttctggaagtgtccgcgaggcgagagcaactgctcgccatggcgcgtacttgccagaattccaacta 42205466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 238
Target Start/End: Original strand, 16583550 - 16583709
Alignment:
Q  69 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 168  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||          ||||||||||||| ||||||| | ||  | ||||||||| ||  |    
T  16583550 tgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttcaatcttgttctaaatcattctctaatctttagtagac 16583639  T
Q  169 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    | ||  ||  |||||||| |||||||||||| ||||||||||||||||  || | ||| |||||||||||    
T  16583640 acctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgacatgctctct 16583709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 3272173 - 3272288
Alignment:
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||| ||||||| | ||| | ||||||||| ||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||  |     
T  3272173 ccaggttcaatcttgttctaaatcatcctctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaa 3272272  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  3272273 ttcaacatgctctctg 3272288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 13635159 - 13635099
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  13635159 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 13635099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 98
Target Start/End: Complemental strand, 15143843 - 15143795
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatc 98  Q
    |||||||||||||||| |||||||||||||||||||||| | |||||||    
T  15143843 ctcgcgaggcgagagcctctgctcgccatggcgagtacaggtcagaatc 15143795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 18302489 - 18302529
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  18302489 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 18302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 11995737 - 11995696
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||| ||||||||||||| |||||||||||||||||||    
T  11995737 cactcaaaaacatctaaggttcaactcaaaagtcaaaaatac 11995696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 34201221 - 34201266
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||||||  |||||||||||| |||||||||||||||||||    
T  34201221 cagacactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 34201266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 31 - 68
Target Start/End: Original strand, 39722544 - 39722581
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatc 68  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  39722544 gcactcaattctggaagtgctcgcgaggcgagagcatc 39722581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 4318365 - 4318317
Alignment:
Q  39 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||||||||||||||||||||||   || |||||||||||||||||    
T  4318365 ttctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 4318317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 17701335 - 17701275
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||  ||||||||||||    
T  17701335 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaatttgacatgctctctg 17701275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 28505107 - 28505071
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  28505107 gctcgcgaggcgagagcctctgctcgccatggcgagt 28505071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 44116820 - 44116872
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  44116820 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 44116872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 2832114 - 2832075
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||| ||||    
T  2832114 agtgctcgcgaggcgagagcctctgctcgccatggtgagt 2832075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 39267455 - 39267416
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||| |||||||||||| |||||||||||||||||||    
T  39267455 agtgctcccgaggcgagagcctctgctcgccatggcgagt 39267416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 40443703 - 40443754
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  40443703 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 40443754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 18531531 - 18531581
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 90  Q
    |||||||||||||||||||||||||    | ||||||||||||||||||||    
T  18531531 tctggaagtgctcgcgaggcgagagttcttactcgccatggcgagtacaag 18531581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Original strand, 26212427 - 26212469
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||    
T  26212427 cactcaaaggcatctaaggttcaactcaaaagtcaaaattaca 26212469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 28504980 - 28504938
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||    
T  28504980 cactcaaaaacatctaaggttcaactcaaaagtcaaaattaca 28504938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 11080 - 11043
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  11080 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 11043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 18748 - 18711
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18748 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 2831985 - 2831948
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  2831985 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 2831948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 6801628 - 6801665
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  6801628 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 6801665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 9593761 - 9593798
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9593761 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 9593798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 9644724 - 9644761
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9644724 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 9644761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 9751229 - 9751192
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  9751229 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 9751192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 11987628 - 11987665
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  11987628 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 11987665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 11995837 - 11995800
Alignment:
Q  48 tgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  11995837 tgctcgcgaggcgagagcctctgcttgccatggcgagt 11995800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 15728740 - 15728777
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15728740 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15728777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 16275907 - 16275944
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16275907 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16275944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 16724321 - 16724284
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16724321 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16724284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 27847523 - 27847482
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  27847523 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 27847482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 35152021 - 35152058
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  35152021 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 35152058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 38227795 - 38227844
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 99  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||    
T  38227795 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 38227844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 40443819 - 40443860
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  40443819 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 40443860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 33385 - 33441
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  33385 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 33441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 68060 - 68096
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  68060 gctcgcgaggcgagagcctctactcgccatggcgagt 68096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 70593 - 70537
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  70593 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 70537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 74702 - 74646
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  74702 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 74646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 810940 - 810900
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| ||| |||||||||||||||    
T  810940 aagtactcgcgaggcgagagcctctactcgccatggcgagt 810900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 9389380 - 9389332
Alignment:
Q  172 tccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    |||||||||||||| ||||| ||||||| ||| ||||||||||| ||||    
T  9389380 tccagacactcaaaaacatccaaggttcaacttaaaagtcaaaagtaca 9389332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 9389502 - 9389466
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  9389502 gctcgcgaggcgagagcctctactcgccatggcgagt 9389466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 9751356 - 9751320
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  9751356 gctcgcgaggcgagagcctctgctcaccatggcgagt 9751320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 12318543 - 12318603
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||  ||||||| |||| ||||||||||||||||  |||| ||| ||||||||||||    
T  12318543 actcaaaagcatctaatgttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 12318603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 34201098 - 34201134
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  34201098 gctcgcgaggcaagagcctctgctcgccatggcgagt 34201134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 162; Significance: 1e-86; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 13569779 - 13570012
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  13569779 gacacggatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacta 13569878  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  || ||  || |||||||| ||||||||||||| |||||    
T  13569879 atgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaccacctttaggcactcaaaaacatctaaggttcaactca 13569978  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||||||||||||||||    
T  13569979 aaagtcaaaaatacagaattctacatgctctctg 13570012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 15094040 - 15094273
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  15094040 gacacagatcgcaatatcctaacttgcactcagttttggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaacta 15094139  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||||||||||||||||||| ||| |||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||    
T  15094140 aagttgttctaagctataccaggttcaatctcattccaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactca 15094239  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||||||||||| ||||    
T  15094240 aaagtcaaaaatacagaattctacatgctttctg 15094273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 15124990 - 15124773
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||| ||| |||    
T  15124990 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagccagattcccaactaatgttgttctaagcta 15124891  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 221  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||||||||| ||||||| ||||||| |||||    
T  15124890 aaccaggttcaatctcgttctaagttatcatttaatctttaataggcatcttcaggcactcaaaaatatctaaggttcgactcaaaggtcaaaagtacag 15124791  T
Q  222 atttctacatgctctctg 239  Q
    | || |||||||||||||    
T  15124790 agttatacatgctctctg 15124773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 44675899 - 44676132
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||    
T  44675899 gacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatggggagtactagccagattcccaacta 44675998  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||    
T  44675999 atgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactca 44676098  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||| ||| ||||||||||||||||    
T  44676099 aaagtcaaaaatatagaattctacatgctctctg 44676132  T

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Target: chr4; HSP #5
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 12570306 - 12570521
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |    
T  12570306 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 12570405  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||  ||||||| ||||| ||||||||||||   ||||  || |||||||| ||||||||||||| ||||| ||||||||||||||||     
T  12570406 ccaggttcaatctcactctaagtcatcatctaatctttaataaatatctttaggcactcaaaaacatctaaggttcaactcacaagtcaaaaatacagaa 12570505  T
Q  224 ttctacatgctctctg 239  Q
    ||||||||||||||||    
T  12570506 ttctacatgctctctg 12570521  T

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Target: chr4; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 15121655 - 15121422
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  15121655 gacacagatcgcaaagttctcacttgcactcaattctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattcccaacta 15121556  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||    
T  15121555 aagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactca 15121456  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||| | ||| ||||||||||||    
T  15121455 aaagtcaaaaatacataattcaacatgctctctg 15121422  T

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Target: chr4; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 23843745 - 23843979
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||    
T  23843745 gacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaacta 23843844  T
Q  106 aagttgttttaaactataccaggttc-aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactc 204  Q
    | |||||| ||| ||| ||||||||| |||||| ||| |||||||||||||||| |||||   |||||  || |||||||| ||||||||||||| ||||    
T  23843845 atgttgttctaagctaaaccaggttcaaatctcattccaagttatcatttaatcattaatgaacatctttaggcactcaaaaacatctaaggttcaactc 23843944  T
Q  205 aaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||| |||||| ||||||||||||||||    
T  23843945 aaaagtcaaaagtacagaattctacatgctctctg 23843979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 16356784 - 16356572
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||| ||| ||| ||||    
T  16356784 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccagcttaagttgttctaagctaaacca 16356685  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||| |||    
T  16356684 ggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaattc 16356585  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  16356584 aacatgctctctg 16356572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 16487927 - 16487697
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16487927 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaag 16487828  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    | ||| ||| ||| | |||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||| ||||| |||||||||||  ||||||||    
T  16487827 tggttctaagctaaaacaggttcaatctcgttctaaatcatcatctaatctttaataaacatctttaggcacccaaaggcatctaaggtttaactcaaaa 16487728  T
Q  209 gtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||| ||| ||||||||||||    
T  16487727 gtcaaaaatacagaattcgacatgctctctg 16487697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 36133791 - 36133592
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  36133791 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 36133702  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||||| ||| | |||||||||  | ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  36133701 tcaatcttgttctaagtcatcctctaatctttagcaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcaac 36133602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 19757427 - 19757347
Alignment:
Q  33 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19757427 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 19757347  T

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Target: chr4; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 19782379 - 19782459
Alignment:
Q  33 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19782379 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 19782459  T

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Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 80 - 239
Target Start/End: Complemental strand, 16348470 - 16348311
Alignment:
Q  80 gcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagaca 179  Q
    |||||||||||||||||| ||| || |||||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||   ||||  || ||    
T  16348470 gcgagtacaagccagaattccagcttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaatatcttaaggca 16348371  T
Q  180 ctcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||  |||||||||||| ||||||||||||||| |||||| ||| ||||||||||||    
T  16348370 ctcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattcaacatgctctctg 16348311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 17152315 - 17152233
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  17152315 gcactcagttctggaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 17152233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 18237170 - 18237345
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||          |||||||    
T  18237170 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt----------ccaggtt 18237259  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  18237260 caatctcgttctaaatcattctataatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 18237345  T

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Target: chr4; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 23139548 - 23139630
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  23139548 gcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 23139630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 26243493 - 26243411
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26243493 gcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 26243411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 45938425 - 45938507
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  45938425 gcacttagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 45938507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 113
Target Start/End: Complemental strand, 16678415 - 16678335
Alignment:
Q  33 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16678415 actcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgtt 16678335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 9556809 - 9556890
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  9556809 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 9556890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 11250389 - 11250211
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  11250389 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 11250300  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  11250299 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 11250211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 1951590 - 1951514
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  1951590 tgcactcagttctggaagtgctcgcgaagcgagagcatctgctcgccatggcgagtacaagccagattcccaactaa 1951514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 15353134 - 15352957
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||  ||||||          |||||||    
T  15353134 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactatggttgtt----------ccaggtt 15353045  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 218  Q
    |||||| ||||||||| ||| |  |||||||||||   | ||  ||  |||||||| |||||||||||| ||||||||||| ||||||    
T  15353044 caatcttgttctaagtcatcctcaaatctttaatacataactaaaggtactcaaaggcatctaaggttcaactcaaaagtccaaaata 15352957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 3413078 - 3413156
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  3413078 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 3413156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 16243220 - 16243146
Alignment:
Q  39 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16243220 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 16243146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 236
Target Start/End: Original strand, 2015057 - 2015251
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 131  Q
    |||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| ||||||          ||||||||    
T  2015057 cactcaattctggaagtgctcgcgaggcgagagcgtctgctcaccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttc 2015146  T
Q  132 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 231  Q
    |||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||    
T  2015147 aatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgacat 2015246  T

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Target: chr4; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 16351672 - 16351498
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||          ||| |||||||||||    
T  16351672 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggt----------tattccaggttcaat 16351583  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    || ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  16351582 cttgttctaaatcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 16351498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 18222205 - 18222124
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  18222205 cactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgtt 18222124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 43255990 - 43255927
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43255990 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 43255927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 9530711 - 9530793
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||| |||||||||  |||||||||||||||| |||||||||| |||||||| ||||||    
T  9530711 gcactcagttctggaagtgctcgcgaggtgagagcatcatctcgccatggcgagtataagccagaattccaactaaggttgtt 9530793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 25555798 - 25555972
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | |||||||   |||||          |||||||||||    
T  25555798 tcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatgattgtt----------ccaggttcaat 25555887  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    || ||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||| ||||||| |||||||    
T  25555888 cttgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactaaaaagtccaaaatac 25555972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 28569271 - 28569190
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  28569271 cactcaattctggaagtgctcacgaagcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 28569190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 18602569 - 18602491
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| || ||||||    
T  18602569 tcagttttggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagctagaattccaaccaaggttgtt 18602491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 27534303 - 27534365
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  27534303 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 27534365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 4561160 - 4561099
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4561160 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 4561099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 5756764 - 5756703
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5756764 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 5756703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 33742657 - 33742718
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33742657 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 33742718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 17047763 - 17047702
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  17047763 cactcaaagacatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 17047702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 18609154 - 18609085
Alignment:
Q  44 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| || ||||||    
T  18609154 gaagtgctcgcgaggcgagagcaccagctcgccatggcgagtacaagccagaattccaaccaaggttgtt 18609085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 23838720 - 23838793
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  23838720 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 23838793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 14708459 - 14708400
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14708459 ctcaattcaggaaatgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 14708400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 42997275 - 42997216
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  42997275 ctcaattctggaagtgctcgcgaggcgagagcatctgttcgccatggcgagtacgagcca 42997216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 14679249 - 14679302
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  14679249 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcca 14679302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 14685458 - 14685511
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  14685458 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcca 14685511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 41385564 - 41385491
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |   |||||||||| ||||||    
T  41385564 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcgaacttcccaactaatgttgtt 41385491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 35614226 - 35614298
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||| || || || || |||||||||||||    
T  35614226 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtaccagaca-aaaccaaactaaagttgtt 35614298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 22634023 - 22633983
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  22634023 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 22633983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 3332197 - 3332236
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  3332197 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 3332236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 7089191 - 7089242
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  7089191 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 7089242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 13812618 - 13812579
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  13812618 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 13812579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 17047879 - 17047828
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  17047879 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 17047828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 24029053 - 24029092
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  24029053 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 24029092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 13812492 - 13812451
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  13812492 cagacactcaaaggcatctaaggttcaactcaaaagtcaaaa 13812451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 24029183 - 24029220
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||||||||||||||||||| |||||||||||||||    
T  24029183 cactcaaagacatctaaggttcaactcaaaagtcaaaa 24029220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 12774309 - 12774349
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  12774309 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 12774349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 3096957 - 3097008
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  3096957 ctcgcgaggcgagagcctctgctcgccttggcgagttcaggtcagaatccca 3097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Original strand, 15190631 - 15190670
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagtaca 88  Q
    ||||||||||||||||| ||| ||||||||||||||||||    
T  15190631 gctcgcgaggcgagagcctctactcgccatggcgagtaca 15190670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 20157099 - 20157060
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| ||||| |||||||||||||    
T  20157099 agtgctcgcgaggcgagagcctctgcacgccatggcgagt 20157060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 44102525 - 44102560
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||| |||||||||||||||||||    
T  44102525 ctcgcgaggcgagagcctctgctcgccatggcgagt 44102560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 44928729 - 44928694
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||| |||||||||||||||||||    
T  44928729 ctcgcgaggcgagagcctctgctcgccatggcgagt 44928694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 1951451 - 1951414
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  1951451 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 1951414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 12522375 - 12522424
Alignment:
Q  44 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||| ||||| |||| ||  |||||||||||||||||||    
T  12522375 gaagtgctcgcgaggtgagagtatctactttccatggcgagtacaagcca 12522424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 13844977 - 13845018
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||||||||| ||||||||||||| ||| |||||||||||    
T  13844977 cagacactcaaaaacatctaaggttcaacttaaaagtcaaaa 13845018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 14052992 - 14052951
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  14052992 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 14052951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 14708324 - 14708287
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  14708324 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 14708287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 16243090 - 16243053
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16243090 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16243053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 18222068 - 18222031
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18222068 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18222031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 23139686 - 23139723
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23139686 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23139723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 26243355 - 26243318
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26243355 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26243318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 27534441 - 27534482
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||    
T  27534441 actcaaagacatctaaggttcaactcaaaagtcgaaattaca 27534482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 28569134 - 28569097
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  28569134 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 28569097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 43255850 - 43255813
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  43255850 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 43255813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 45938563 - 45938600
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  45938563 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 45938600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 8846688 - 8846724
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  8846688 gctcgcgaggcgagagcctctactcgccatggcgagt 8846724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 15099664 - 15099700
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  15099664 gctcgcgaggcgagagcctctactcgccatggcgagt 15099700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 219
Target Start/End: Original strand, 17053478 - 17053514
Alignment:
Q  183 aaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||| |||||||||||| |||||||||||||||||||    
T  17053478 aaaggcatctaaggttcaactcaaaagtcaaaaatac 17053514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 17810550 - 17810606
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  17810550 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 17810606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 21815108 - 21815068
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaag 90  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  21815108 ctcgcgaggcgagagcctctactcgccatggcgagttcaag 21815068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 21818530 - 21818490
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaag 90  Q
    |||||||||||||||| ||| ||||||||||||||| ||||    
T  21818530 ctcgcgaggcgagagcctctactcgccatggcgagttcaag 21818490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 158; Significance: 4e-84; HSPs: 86)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 23201636 - 23201869
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  23201636 gacacagatcgcaatatcctcacttgcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccagattcccaacta 23201735  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| || |||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||    
T  23201736 atgttgttataagctaaaccaggttcaatctcattataagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactca 23201835  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| |||||| ||||||||||||||||    
T  23201836 aaagtcaaaagtacagaattctacatgctctctg 23201869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 6 - 238
Target Start/End: Original strand, 37724171 - 37724403
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |    
T  37724171 gacacagatcgcaatctcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaccagccagattcccaacaa 37724270  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| |||  || ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||    
T  37724271 atgttgttctaagttaaaccaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactca 37724370  T
Q  206 aaagtcaaaaatacagatttctacatgctctct 238  Q
    |||||||||| |||||| |  ||||||||||||    
T  37724371 aaagtcaaaattacagaatcttacatgctctct 37724403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 22032601 - 22032816
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||| |    
T  22032601 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaa 22032700  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||||||||||     
T  22032701 ccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaa 22032800  T
Q  224 ttctacatgctctctg 239  Q
    ||| || || ||||||    
T  22032801 ttcaacgtgttctctg 22032816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 23501197 - 23500964
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||    
T  23501197 gacacagatcgcaacattctcactttcactcagttctggaagtgctcgcgaggtgagagcatctgctcgccatggcgagtacaagcaagattcccaacta 23501098  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| |||||||||||||||| |||||| ||||||||||| ||||||| |||||| ||| |||||||| ||||||||||||| |||||    
T  23501097 atgttgttctaagctaaaccaggttcaatctcggtctaagctatcatttaatatttaataagcatcttcaggcactcaaaaacatctaaggttcaactca 23500998  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||| |  |||||||| ||||||||||||||||    
T  23500997 aaagttaggaatacagaattctacatgctctctg 23500964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 14079415 - 14079648
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||    
T  14079415 gacacagatcgcaacatcctcacttgcactcagttctagaagtgctcgcgaggcgagagcatttgctcgccatggcgagtactagccagattcccaacta 14079514  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| |||||   ||| |  || |||||||| ||||||||||||  |||||    
T  14079515 atgttgttctaagctaaaccaggttcaatctcattctaagttatcattaaatcattaattaacatatttaggcactcaaaaacatctaaggttgaactca 14079614  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||||||||||||||||    
T  14079615 aaagtcaaaaatacagaattctacatgctctctg 14079648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 18769838 - 18769623
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| ||| ||| |    
T  18769838 ctcacttgcgctcagttctggaagtgctcgcgacgcgagagcatctgctcgccacggcgagtacaagccagaatcctaactaaaattgttctaagctaaa 18769739  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||| ||||||||||||||||||     
T  18769738 ccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaacttaaaagtcaaaaatacagaa 18769639  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||| ||||||    
T  18769638 ttcaacatgttctctg 18769623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 23512374 - 23512604
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||    
T  23512374 gacacagatcgcaacatcctaacatgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaacta 23512473  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||    
T  23512474 aagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactca 23512573  T
Q  206 aaagtcaaaaatacagatttctacatgctct 236  Q
    |||||| |||||||||| ||| |||||||||    
T  23512574 aaagtcgaaaatacagaattcaacatgctct 23512604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 26704328 - 26704542
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  26704328 catgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagattccc 26704427  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| |  |||||| ||   || ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||| |||||     
T  26704428 aacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaatatctagggttca 26704527  T
Q  201 actcaaaagtcaaaa 215  Q
    |||||||||||||||    
T  26704528 actcaaaagtcaaaa 26704542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 26974061 - 26974275
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  26974061 catgcgacacagatcacattttccttacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagattccc 26974160  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| |  |||||| ||   || ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| | ||||| |||||     
T  26974161 aacaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaatatctagggttca 26974260  T
Q  201 actcaaaagtcaaaa 215  Q
    |||||||||||||||    
T  26974261 actcaaaagtcaaaa 26974275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 39 - 239
Target Start/End: Original strand, 21887124 - 21887324
Alignment:
Q  39 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcg 138  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| | |||||||| ||||     
T  21887124 ttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaagcaggttcattctca 21887223  T
Q  139 ttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    |||||||||||||||||||||||||||  |||||  || |||||||| ||||||||||||| ||||||||||||||| |||||| ||| |||||||||||    
T  21887224 ttctaagttatcatttaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaagtacagaattcaacatgctctct 21887323  T
Q  239 g 239  Q
    |    
T  21887324 g 21887324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 21366497 - 21366286
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| | ||    
T  21366497 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaatca 21366398  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  21366397 ggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 21366298  T
Q  227 tacatgctctct 238  Q
     |||||||||||    
T  21366297 aacatgctctct 21366286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 20805814 - 20806047
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||| | ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||     
T  20805814 gacacagatcgcaacatcctaatttgcattcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactc 20805913  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  ||| |||||||| |||||    
T  20805914 aagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatataaggttcaactca 20806013  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| |||||| ||| ||||||||||||    
T  20806014 aaagtcaaaattacagaattcaacatgctctctg 20806047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 24 - 164
Target Start/End: Original strand, 23572364 - 23572504
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||| |    
T  23572364 ctcacttgcactcagttctggaagtgcgcgcgaggcgagagcatctgctcgccatggggagtacaagccagaatcccaactaaagttgttctaagctaaa 23572463  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaat 164  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  23572464 ccaggttcaatctcattctaagttatcatttaatctttaat 23572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 238
Target Start/End: Original strand, 31342399 - 31342602
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||   |||||||| |||||| ||| |||  |||||||||||    
T  31342399 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagttcagcccagatctccaactaaggttgttctaagctaagccaggttcaat 31342498  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgct 234  Q
    ||| ||||| ||||||||||||||||  |||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||||| ||  |||||||    
T  31342499 ctcattctaggttatcatttaatcttctataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaacacagaatttgacatgct 31342598  T
Q  235 ctct 238  Q
    ||||    
T  31342599 ctct 31342602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 17410724 - 17410923
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  17410724 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 17410813  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||||| ||||||||| ||  || ||  ||  |||| ||| | |||||||||| ||||||||||||||||  |||| ||| ||    
T  17410814 tcaatcttgttctaaatcatcatctaatctttagtagacacctaaaggtactccaaggcgtctaaggttcaactcaaaagtcaaaaactcagaattcgac 17410913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 30 - 215
Target Start/End: Complemental strand, 20910629 - 20910454
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  20910629 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 20910540  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  ||||||||||||||||||||| |||||||||||||||    
T  20910539 tcaatcttgttctaattcatcctctaatctttagtagacacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaa 20910454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 30 - 216
Target Start/End: Complemental strand, 23535418 - 23535242
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||          ||||||    
T  23535418 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagattcccaactaaggttgtt----------ccaggt 23535329  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||||||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  23535328 tcaatctcgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 23535242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 21340595 - 21340513
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21340595 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 21340513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 26665959 - 26665877
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26665959 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 26665877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 26937556 - 26937474
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26937556 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 26937474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 239
Target Start/End: Complemental strand, 17918979 - 17918781
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||          |||| ||    
T  17918979 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactaaggttgtt----------ccagttt 17918890  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    |||||| ||||||| | ||| | ||||||||||||  || ||  || ||||||||  |||||||||||| ||||||||||||||| |||| | ||| |||    
T  17918889 caatcttgttctaaatcatcctctaatctttaatacacaactaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcgaca 17918790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 18356604 - 18356687
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18356604 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 18356687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 16674430 - 16674605
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||          |||||||    
T  16674430 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaactaaggttgtt----------ccaggtt 16674519  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  16674520 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 16674605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 20232828 - 20232910
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  20232828 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcctaactaaggttgtt 20232910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 216
Target Start/End: Complemental strand, 24532876 - 24532701
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||    
T  24532876 gcactcagttctaaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaggtt 24532787  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||   ||||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  24532786 caatctcgttctaaatcattccttaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 24532701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 12028393 - 12028215
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  12028393 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 12028304  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  12028303 caatcttgttctaaatcatcctctaatctttaatagacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 12028215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 18774482 - 18774565
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  18774482 gcacccagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgttt 18774565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 42805698 - 42805781
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  42805698 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagccagaattccaactaaggttgttt 42805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 17718263 - 17718185
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  17718263 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgtt 17718185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 25229233 - 25229151
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  25229233 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttt 25229151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 25293389 - 25293307
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||    
T  25293389 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgttt 25293307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 21885016 - 21884935
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  21885016 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 21884935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 23451634 - 23451707
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23451634 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 23451707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 23463139 - 23463212
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 103  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23463139 tgcactcagttctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 23463212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 35 - 219
Target Start/End: Original strand, 24222170 - 24222344
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||    
T  24222170 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ccaggttcaat 24222259  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    || ||||||| | ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  24222260 cttgttctaaatcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 24222344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 239
Target Start/End: Complemental strand, 26742574 - 26742376
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||| || || |||||||||||||||||| |||||||||||||||||||||||||| | |||||||| ||||||          ||||| |    
T  26742574 gcactcagttctgaaaatggtcgcgaggcgagagcatcagctcgccatggcgagtacaagccagatttccaactaaggttgtt----------ccaggct 26742485  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    |||||||||||||| | || || |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| || ||||    
T  26742484 caatctcgttctaaatcattatctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattttaca 26742385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 1858805 - 1858732
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 103  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  1858805 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaatccagaattccaac 1858732  T

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Target: chr5; HSP #38
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 4036499 - 4036580
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||| |||||||| ||||||    
T  4036499 cactcagttctggaagtgctcgcgaggcgaaagcatcaactcgccatggcgagtacaagccagaattccaactaaggttgtt 4036580  T

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Target: chr5; HSP #39
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 23458878 - 23458951
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 103  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23458878 tgcactcagttcttgaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 23458951  T

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Target: chr5; HSP #40
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 26172743 - 26172824
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| ||||||    
T  26172743 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttccctactaaggttgtt 26172824  T

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Target: chr5; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 18784336 - 18784408
Alignment:
Q  42 tggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  18784336 tggacgtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaatcccaactaaggttgttt 18784408  T

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Target: chr5; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 26680868 - 26681045
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  26680868 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 26680957  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 218  Q
    || ||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||||    
T  26680958 cattcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaata 26681045  T

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Target: chr5; HSP #43
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 218
Target Start/End: Original strand, 26952475 - 26952652
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  26952475 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 26952564  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 218  Q
    || ||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||||    
T  26952565 cattcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaata 26952652  T

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Target: chr5; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 21873516 - 21873595
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||| || | |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21873516 gacacagatctcaatatcctaacttgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagt 21873595  T

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Target: chr5; HSP #45
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 19472546 - 19472465
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||  | |||||||| ||||||    
T  19472546 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagccagctttccaactaaggttgtt 19472465  T

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Target: chr5; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 123133 - 123070
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccag 94  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  123133 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccag 123070  T

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Target: chr5; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 20296127 - 20296188
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20296127 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 20296188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 21295082 - 21295009
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  21295082 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 21295009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 25535275 - 25535348
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  25535275 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 25535348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 22757414 - 22757458
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  22757414 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 22757458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 15441773 - 15441720
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  15441773 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcca 15441720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 23337107 - 23337060
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||    
T  23337107 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtac 23337060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 239
Target Start/End: Original strand, 23572510 - 23572559
Alignment:
Q  190 tctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  23572510 tctaaggttcaactcaaaagtcaaaaatacagaattcgacatgctctctg 23572559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 22120002 - 22119963
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  22120002 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 22119963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 22760026 - 22760141
Alignment:
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||||| ||     
T  22760026 ccaggttcaatcttgttctaaatcatcctctaatctttagtacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatacggaa 22760125  T
Q  224 ttctacatgctctctg 239  Q
     || ||||||||||||    
T  22760126 atcaacatgctctctg 22760141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 24554820 - 24554893
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||  ||||||||| |||| |||||||| |||||||| |||||   |||||||||| ||||||    
T  24554820 tctggaagtgctcgtaaggcgagagtatctactcgccattgcgagtactagccaacttcccaactaatgttgtt 24554893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 19660644 - 19660608
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  19660644 gctcgcgaggcgagagcctctgctcgccatggcgagt 19660608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 11581051 - 11581016
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||| |||||||||||||||||||    
T  11581051 ctcgcgaggcgagagcctctgctcgccatggcgagt 11581016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Complemental strand, 14359638 - 14359591
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||||||||||||||||||||||||   || |||||||||||||||||    
T  14359638 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 14359591  T

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Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 22107180 - 22107129
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||||||| |||| || | ||||||||||    
T  22107180 ctcgcgaggcgagagcctctgctcgccatggtgagttcaggtcagaatccca 22107129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 24767146 - 24767107
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  24767146 agtgctcgcgaggcgagagcctctgctcgccatgacgagt 24767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 31 - 62
Target Start/End: Original strand, 33409506 - 33409537
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgag 62  Q
    ||||||||||||||||||||||||||||||||    
T  33409506 gcactcagttctggaagtgctcgcgaggcgag 33409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 19660516 - 19660474
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    ||||||||  |||||||||||| ||||||||||||||||||||    
T  19660516 cactcaaaagcatctaaggttcaactcaaaagtcaaaaataca 19660474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 4036636 - 4036673
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  4036636 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 4036673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 17718129 - 17718092
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  17718129 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 17718092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 18356743 - 18356780
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18356743 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18356780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 18784463 - 18784500
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18784463 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18784500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 19669338 - 19669379
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||||||||| |||||||||| || |||||||||||||||    
T  19669338 cagacactcaaaaacatctaaggatcaactcaaaagtcaaaa 19669379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 21292660 - 21292619
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  21292660 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 21292619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 21340457 - 21340420
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21340457 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21340420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 21482894 - 21482931
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21482894 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21482931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 21884879 - 21884842
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21884879 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21884842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 22119872 - 22119811
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||| |||||||||||| |||||||||||||||  ||| | || | |||||||||||    
T  22119872 cactcaaaggcatctaaggttcaactcaaaagtcaaaatcacaaaattttgcatgctctctg 22119811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 25229096 - 25229059
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  25229096 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 25229059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 25293252 - 25293215
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  25293252 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 25293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 26172880 - 26172917
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26172880 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26172917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 26665821 - 26665784
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26665821 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26665784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 26937418 - 26937381
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  26937418 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 26937381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 33409622 - 33409659
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  33409622 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 33409659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 42805836 - 42805873
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  42805836 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 42805873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 5888982 - 5888946
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  5888982 gctcgcgaggcgagagcctctactcgccatggcgagt 5888946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 15236608 - 15236552
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  15236608 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 15236552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 21565858 - 21565894
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||| |||||||||||||||||||    
T  21565858 gctcacgaggcgagagcctctgctcgccatggcgagt 21565894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 115
Target Start/End: Complemental strand, 22410418 - 22410342
Alignment:
Q  39 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtttt 115  Q
    |||||||  |||||||||||||||||    | ||||||||||||||||| |  |||| |||||||||| ||||||||    
T  22410418 ttctggacttgctcgcgaggcgagagttcttactcgccatggcgagtaccactcagattcccaactaatgttgtttt 22410342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 22959340 - 22959304
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22959340 gctcgcgaggcgagagcctctactcgccatggcgagt 22959304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 25744035 - 25744071
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  25744035 gctcgcgaggcgagagcctctactcgccatggcgagt 25744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 18490 - 18275
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  18490 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 18391  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||| |||||||||||| |||||||||| |||||| ||||     
T  18390 ccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaggcatctaaggttcaactcaaaagtaaaaaatgcagaa 18291  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  18290 ttcgacatgctctctg 18275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 73)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 19899362 - 19899592
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  19899362 gacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactagccagattcccaacta 19899461  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||    
T  19899462 atgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactca 19899561  T
Q  206 aaagtcaaaaatacagatttctacatgctct 236  Q
    ||||||||||||||||| |||||||||||||    
T  19899562 aaagtcaaaaatacagaattctacatgctct 19899592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 17353789 - 17353556
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  17353789 gacacaaatcgcaatatcctcacttgcactcagttctgcaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 17353690  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||| |||| ||   || || |||||||||||||||| ||||||||||||||||||||||| |||||| |||  ||||||| ||||||||||||| |||||    
T  17353689 aagctgttctaggttaaactaggttcaatctcgttcaaagttatcatttaatctttaataggcatcttcagggactcaaaaacatctaaggttcaactca 17353590  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||||||||||||||||    
T  17353589 aaagtcaaaaatacagaattctacatgctctctg 17353556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 20465873 - 20465658
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |    
T  20465873 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagaatcccaactaaagctgttctaagctaaa 20465774  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||||||||||| ||||| |||||||||||   |||||  || ||||||||  |||||||||||| ||||||||||||||||||||||     
T  20465773 ccaggttcaatctcgttctaagtcatcatctaatctttaattaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaa 20465674  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  20465673 ttcaacatgctctctg 20465658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 16185011 - 16185228
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||| | |    
T  16185011 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaagttgttctaagcca 16185110  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 221  Q
     ||||||||||||||| |||||||||||||||||||||||||||  |||||  || |||||||| ||||||| ||||| |||||||||||||||||||||    
T  16185111 aaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaaacatctatggttcaactcaaaagtcaaaaatacag 16185210  T
Q  222 atttctacatgctctctg 239  Q
    | ||| ||||||||||||    
T  16185211 aattcaacatgctctctg 16185228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 21168573 - 21168340
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  21168573 gacacagatcgcaacatcctcacttgcactcagatcaggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacta 21168474  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||||||||  || ||| ||||||||||||||| |||||||||||||| ||||||||||||  |||||  || |||||||| || |||||||||| |||||    
T  21168473 aagttgttcaaagctaaaccaggttcaatctcattctaagttatcatctaatctttaataaacatctttaggcactcaaaaacttctaaggttcaactca 21168374  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||| || |||||||||    
T  21168373 aaagtcaaaaatacagaattcaacctgctctctg 21168340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 28 - 239
Target Start/End: Complemental strand, 23776664 - 23776452
Alignment:
Q  28 cttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccag 127  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| ||| ||| |||||    
T  23776664 cttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgcgatagcgagtacaagccagattcccaactaaagttgttctaagctaaaccag 23776565  T
Q  128 gttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatct-aaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||| |||||||||||||||||||||||||||  |||||  || |||||||| |||||| ||||||| |||||||||||||||||||||| |||    
T  23776564 gttcaatctcattctaagttatcatttaatctttaataatcatctttaggcactcaaaaacatctaaaggttcaactcaaaagtcaaaaatacagaattc 23776465  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  23776464 aacatgctctctg 23776452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 21389309 - 21389091
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||| ||||    
T  21389309 catgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaagcgagagcatctgctcaccttggcgagtacaagccagattccc 21389210  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| |  |||||| |||  || ||||||||||||||| |||||||||||||| ||||||||| || |||||| ||| ||||||||  ||||||||||||     
T  21389209 aacaatggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatctttattaagcatcttcaggcactcaaaagcatctaaggttca 21389110  T
Q  201 actcaaaagtcaaaaatac 219  Q
    |||||||||||||||||||    
T  21389109 actcaaaagtcaaaaatac 21389091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 31 - 239
Target Start/End: Original strand, 377570 - 377778
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||| ||| ||||||||    
T  377570 gcactcagttctggaagtgctcgcgagacgagagcatctgctcgccatggcgagtacaagccagaattccaactaaagttattctaagctaaaccaggtt 377669  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    ||||||| ||||||||||| ||||||||||||| |  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||| ||| |||    
T  377670 caatctcattctaagttataatttaatctttaacaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaattcgaca 377769  T
Q  231 tgctctctg 239  Q
    |||||||||    
T  377770 tgctctctg 377778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 24756006 - 24756221
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| |    
T  24756006 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaa 24756105  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||  ||||||| ||||| ||||||||| |    ||||  || |||||||| ||||||||||||| |||||||||| |||||||||||     
T  24756106 ccaggttcaatctcactctaagtcatcatctaatctttatttaatatctttaggcactcaaaaacatctaaggttcaactcaaaagtaaaaaatacagaa 24756205  T
Q  224 ttctacatgctctctg 239  Q
    | ||||||||||||||    
T  24756206 tcctacatgctctctg 24756221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 30643140 - 30642910
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |  |||||||||    
T  30643140 acagatcgcaacatcctaacttgcattcaattctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattttcaactaaag 30643041  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| ||||||||    
T  30643040 ttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaa 30642941  T
Q  209 gtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||| ||| ||||||||||||    
T  30642940 gtcaaaaatacagaattcgacatgctctctg 30642910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 19976712 - 19976947
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||| |||||||||    
T  19976712 gacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtactagtcagattcccaacta 19976811  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||| | |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||    
T  19976812 atgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactca 19976911  T
Q  206 aaagt--caaaaatacagatttctacatgctctctg 239  Q
    |||||   ||||||||| | ||||||||||||||||    
T  19976912 aaagtaaaaaaaatacaaaattctacatgctctctg 19976947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 22010513 - 22010298
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||| ||| ||| |    
T  22010513 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaa 22010414  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||||||||| | ||||| ||||||||| ||  |||||  || ||||||||  |||||||||||| ||| ||||||||||||||||||     
T  22010413 ccaggttcaatctcgttctaaatcatcatctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactaaaaagtcaaaaatacagaa 22010314  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  22010313 ttcaacatgctctctg 22010298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 15602848 - 15602636
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||    
T  15602848 acttgcattaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaacca 15602749  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||| ||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  15602748 ggttcaatcttgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 15602649  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  15602648 aacatgctctctg 15602636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 15611300 - 15611088
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||    
T  15611300 acttgcattaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaacca 15611201  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||| ||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  15611200 ggttcaatcttgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 15611101  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  15611100 aacatgctctctg 15611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 19259432 - 19259221
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||| ||| ||| ||||    
T  19259432 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaatacaagccagaattccaactaaggttgttctaagctaaacca 19259333  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||| |||||| |||||||| ||||||||||||||||||  |||||  || ||||||||| |||||||||||| ||||||||||||||| |  ||| |||    
T  19259332 ggtttaatctcattctaagtcatcatttaatctttaataaacatctttaggcactcaaag-catctaaggttcaactcaaaagtcaaaattcaagaattc 19259234  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  19259233 aacatgctctctg 19259221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 19983360 - 19983595
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||||| |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| |||||||||    
T  19983360 gacacagatcgcaacatcctcatttgcactcagttttggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtactagtcagattcccaacta 19983459  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||| | |||||||||||||||||||| ||||||  |||||  || |||||||| ||||||||||||| |||||    
T  19983460 atgttgttctaagctaaaccaggttcaatcccattctaagttatcatttaatcattaataaacatctttaggcactcaaaaacatctaaggttcaactca 19983559  T
Q  206 aaagt--caaaaatacagatttctacatgctctctg 239  Q
    |||||   ||||||||||| ||||||||||||||||    
T  19983560 aaagtaaaaaaaatacagaattctacatgctctctg 19983595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 21395839 - 21395630
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  21395839 catgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgcttgccttggcgagtacaagccagattccc 21395740  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| |  |||||| |||  ||  |||||||||||||| |||||||||||||| ||||||||| || |||||| ||| ||||||||  ||||||||||||     
T  21395739 aacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctttattaagcatcttcaggcactcaaaagcatctaaggttca 21395640  T
Q  201 actcaaaagt 210  Q
    ||||||||||    
T  21395639 actcaaaagt 21395630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 21790332 - 21790123
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  21790332 catgcgacacagatcgcattttcctcacttgcactcagttctggacgtgctcgcgaggcgagagcatctgcttgccttggcgagtacaagccagattccc 21790233  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| |  |||||| |||  ||  |||||||||||||| |||||||||||||| ||||||||| || |||||| ||| ||||||||  ||||||||||||     
T  21790232 aacaatggttgttctaagttaacccaggttcaatctcattctaagttatcatataatctttattaagcatcttcaggcactcaaaagcatctaaggttca 21790133  T
Q  201 actcaaaagt 210  Q
    ||||||||||    
T  21790132 actcaaaagt 21790123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 29 - 210
Target Start/End: Complemental strand, 17926536 - 17926355
Alignment:
Q  29 ttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 128  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| |||  || ||||||    
T  17926536 ttgcattcagttctgggagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccataattccaacttaagttgttctaagataaaccagg 17926437  T
Q  129 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagt 210  Q
    |||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||    
T  17926436 ttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagt 17926355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 6 - 238
Target Start/End: Complemental strand, 16410107 - 16409875
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||| | ||||| ||||||||| | |||||||| | |||||||||||||||||||||||||||| ||||||||||| |||||||    
T  16410107 gacacagatcgcaacatcctaatttgcattcagttctgaaggtgctcgccaagcgagagcatctgctcgccatggcgagttcaagccagaattccaacta 16410008  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||||| || ||| ||| ||||||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||    
T  16410007 aagttattctaagctaaaccaggttcaatctcattctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactca 16409908  T
Q  206 aaagtcaaaaatacagatttctacatgctctct 238  Q
    |||||||||| |||  | ||| |||||||||||    
T  16409907 aaagtcaaaattacgaaattcaacatgctctct 16409875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 31 - 215
Target Start/End: Complemental strand, 20856252 - 20856068
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||| ||| ||| ||||||||    
T  20856252 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattgcaactaaggttgttctaagctaaaccaggtt 20856153  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||| ||| ||| | ||||| |||||||||||   |||||  || ||||||||  |||||||||||| |||||||| ||||||    
T  20856152 caatcttgttttaaatcatcatctaatctttaatggacatctaaaggcactcaaaagcatctaaggttcaactcaaaattcaaaa 20856068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 16861155 - 16860956
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |||   ||| | ||       ||| ||||||    
T  16861155 tgcactcagttctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagcaagaattcca---aaaatggt-------tattccaggt 16861066  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||  | ||| ||    
T  16861065 tcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaattcaac 16860966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 15538726 - 15538808
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15538726 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 15538808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 24434065 - 24433983
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24434065 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 24433983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 63 - 239
Target Start/End: Complemental strand, 16412064 - 16411888
Alignment:
Q  63 agcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatcttta 162  Q
    ||||||||||||||||||||||| ||||||||||| ||| |||| |||||| ||| ||| || |||||||||||  | |||  |||||||||||||||||    
T  16412064 agcatctgctcgccatggcgagttcaagccagaattccacctaaggttgttctaagctaaactaggttcaatctgatcctacattatcatttaatcttta 16411965  T
Q  163 atatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||  |||||  || |||||||| |||| |||||||| ||||||||||||||| |||| | ||| ||||||||||||    
T  16411964 atacacatcttaaggcactcaaaaacatttaaggttcaactcaaaagtcaaaattacaaaattcaacatgctctctg 16411888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 15532166 - 15532248
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  15532166 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcggcatggcgagtacaagccagaatcccaactaaggttgtt 15532248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 216
Target Start/End: Complemental strand, 39094769 - 39094594
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| |||||||          | ||||    
T  39094769 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgttt----------cgggtt 39094680  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| ||||    
T  39094679 caatctcgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaa 39094594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 16231304 - 16231105
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||| ||||||          ||||||    
T  16231304 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagattctcaactaaggttgtt----------ccaggt 16231215  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||  | ||||||||| ||  || ||   |  ||||||||||||||||||||| | ||||||||| ||||  |||| ||| ||    
T  16231214 tcaatcttgttctaaatcattctctaatctttagtagacacctaagggtactcaaagacatctaaggttcaaatcaaaagtcgaaaactcagaattcgac 16231115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 17828411 - 17828336
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17828411 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaataacaactaa 17828336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 22028834 - 22028917
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||| ||||||    
T  22028834 tgcactcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtactagccagattcccaactaaggttgtt 22028917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 23834450 - 23834533
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||| ||||||    
T  23834450 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatcgcgagtacaagccagattctcaactaaggttgtt 23834533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 30308582 - 30308500
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||| ||||||    
T  30308582 gcactcagttctggaagtgctcgcgaggcgagagcattagctcgccatggcgagtacaagccagaattccaactaaggttgtt 30308500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 22113555 - 22113474
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  22113555 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 22113474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 22135058 - 22134977
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  22135058 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 22134977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 23846842 - 23846761
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||    
T  23846842 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacttaggttgtt 23846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 18619756 - 18619838
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||| ||| ||||||    
T  18619756 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatgacgagtacaagccagaattccaagtaaggttgtt 18619838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 22166208 - 22166127
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  22166208 cactcaattctggaagtgcttgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 22166127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 21161910 - 21161838
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 78  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21161910 gacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccat 21161838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 33 - 113
Target Start/End: Original strand, 22045138 - 22045218
Alignment:
Q  33 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||||| ||||||    
T  22045138 actcaggtctggaagtgctcgcgaggcgagagcatctgctcgccatgacaagtacaagccagattcccaactaaggttgtt 22045218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 43252092 - 43252153
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43252092 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 43252153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 17055214 - 17055155
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  17055214 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgactacaagcca 17055155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 21161834 - 21161735
Alignment:
Q  139 ttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    |||||||||||||| ||||||||||||  |||||  || |||||||| || |||||||||| |||||||||||||||||||||| ||| || ||||||||    
T  21161834 ttctaagttatcatctaatctttaataaacatctttaggcactcaaaaacttctaaggttcaactcaaaagtcaaaaatacagaattcaacctgctctct 21161735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32598959 - 32599018
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32598959 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaagcca 32599018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 32605491 - 32605550
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  32605491 ctcaattctggaagtgctcgcaaggcgagagcatctgctcgccatggcgagtacaagcca 32605550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 20527736 - 20527809
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  20527736 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 20527809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 21972411 - 21972350
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  21972411 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtacaggcca 21972350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 21976496 - 21976435
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||    
T  21976496 cactcaattctggaagtgctcgcggggcgagagcatctgctcgccgtggcgagtacaggcca 21976435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 25362830 - 25362770
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  25362830 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctct 25362770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 19278110 - 19278050
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  19278110 cactcaattctgaaagtgctcgcgaggcgagagcatctgctcgccgtggc-agtacaagcca 19278050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 21918807 - 21918756
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  21918807 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 21918756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 23252452 - 23252393
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||||||||||    
T  23252452 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctct 23252393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 21249695 - 21249732
Alignment:
Q  48 tgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||| |||||||||||||||||||    
T  21249695 tgctcgcgaggcgagagcctctgctcgccatggcgagt 21249732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 5866083 - 5866047
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  5866083 gctcgcgaggcgagagcctctgctcgccatggcgagt 5866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 17141228 - 17141264
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  17141228 gctcgcgaggcgagagcctctgctcgccatggcgagt 17141264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 22028973 - 22029033
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||  |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  22028973 actcaaaagcatctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 22029033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 22045274 - 22045334
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||| |||||||||||| ||||||| ||||||||  |||| ||| ||||||||||||    
T  22045274 actcaaaggcatctaaggttcaactcaaaggtcaaaaactcagaattcgacatgctctctg 22045334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 41598499 - 41598551
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  41598499 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 41598551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 19905783 - 19905830
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||||||||||||||||||||||||   || |||||||||||||||||    
T  19905783 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 19905830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 22057773 - 22057824
Alignment:
Q  188 catctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  22057773 catctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 22057824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 25362943 - 25362896
Alignment:
Q  54 cgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||| ||||||||||||||||||| || | ||||||||||    
T  25362943 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 25362896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 5865956 - 5865915
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  5865956 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 5865915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 15532304 - 15532341
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15532304 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15532341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 15538864 - 15538901
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15538864 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15538901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 21255533 - 21255570
Alignment:
Q  48 tgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  21255533 tgctcgcgaggcgagagccgctgctcgccatggcgagt 21255570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22113418 - 22113381
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22113418 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22113381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22134921 - 22134884
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22134921 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22134884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 22166071 - 22166034
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  22166071 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 22166034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 23834589 - 23834626
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23834589 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23834626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 24433927 - 24433890
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  24433927 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 24433890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 32599094 - 32599131
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  32599094 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 32599131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 32605626 - 32605663
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  32605626 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 32605663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 22875380 - 22875432
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| |||||||| |||||||||| || | |||| ||||||    
T  22875380 ctcgcgaggcgagagcctctgctcgtcatggcgagttcaggtcagattcccaa 22875432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 39834146 - 39834182
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  39834146 gctcgcgaggcgagagcctctactcgccatggcgagt 39834182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 21714812 - 21715026
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21714812 catgcgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 21714911  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| || |||||| ||   || ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| |||||||||||||     
T  21714912 aacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttca 21715011  T
Q  201 actcaaaagtcaaaa 215  Q
    |||||||||||||||    
T  21715012 actcaaaagtcaaaa 21715026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 42865063 - 42864830
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  42865063 gacacagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactagccagattcccaacta 42864964  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| |||||||||||||||||||| ||||||  || ||  || |||||||| ||||||||||||| |||||    
T  42864963 atgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatcattaataaacaactttaggcactcaaaaacatctaaggttcaactca 42864864  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||||||||||||||||    
T  42864863 aaagtcaaaaatacagaattctacatgctctctg 42864830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 22831235 - 22830997
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||   | |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  22831235 catgcgacacagatcgcaacattctcaattgcactcagttcaggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctc 22831136  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||||||||||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| |||||||||||||     
T  22831135 aactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttca 22831036  T
Q  201 actcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  22831035 actcaaaagtcaaaaatacagaattcaacatgctctctg 22830997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 6 - 235
Target Start/End: Complemental strand, 21787894 - 21787665
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||| |||||  || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  21787894 gacacaggtcgcaaatttctcacttgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccagattcccaacta 21787795  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||| |||||||||||||| ||||||||| ||  |||||  || |||||||| ||||||||||||| |||||    
T  21787794 atgttgttataagctaaaccaggttcaatctcattctaagttatcatataatctttattaaacatctttaggcactcaaaaacatctaaggttcaactca 21787695  T
Q  206 aaagtcaaaaatacagatttctacatgctc 235  Q
     |||||||||||||||| ||| ||||||||    
T  21787694 caagtcaaaaatacagaattcaacatgctc 21787665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 18181973 - 18181743
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  18181973 gacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcaaggcgagagcatctgctcgccatagcgagtacaagccagaattccaacta 18181874  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| ||||||||||||| |||||||||| ||||| ||||| ||||||  |||||  || ||||||||  |||||||||||| |||||    
T  18181873 aagttgttctaagctaaaccaggttcaatcccgttctaagtcatcatctaatcattaataaacatctttaggcactcaaaagcatctaaggttcaactca 18181774  T
Q  206 aaagtcaaaaatacagatttctacatgctct 236  Q
    ||||||||||||||| | ||| |||||||||    
T  18181773 aaagtcaaaaatacaaaattcgacatgctct 18181743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 22468548 - 22468339
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||||||||    
T  22468548 gacacatatcgcaataccctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcttcatgtcgagtacaagccagattcccaacta 22468449  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| |||  || ||| ||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||    
T  22468448 atgttgttctaagttaaacctggttcaatctctttctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactca 22468349  T
Q  206 aaagtcaaaa 215  Q
    ||||||||||    
T  22468348 aaagtcaaaa 22468339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 231
Target Start/End: Original strand, 6152117 - 6152347
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||   |||| || |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6152117 catgcgacacagatcgcaacatcctaacatgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatccc 6152216  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||||||| ||||| ||| ||| |||||||||||||   |||||||||||||||||||||||||||  |||||  || ||||||||  || |||||||||     
T  6152217 aactaaaattgttctaagctaaaccaggttcaatcctattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcaactaaggttca 6152316  T
Q  201 actcaaaagtcaaaaatacagatttctacat 231  Q
    ||||||| |||||||||||||| ||| ||||    
T  6152317 actcaaaggtcaaaaatacagaattcaacat 6152347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 21022923 - 21023138
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||| ||| |    
T  21022923 ctcactagtactgagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccagaatcccaactaaggttgttctaagctaaa 21023022  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||| |||||||| ||||| ||||||||||||  |||||   | ||||||||  ||| |||||||| ||||||||||||||| ||||||     
T  21023023 ccaggttcaatctcattctaagtcatcatctaatctttaataaacatcttttggcactcaaaagcatttaaggttcaactcaaaagtcaaaattacagaa 21023122  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  21023123 ttcaacatgctctctg 21023138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 29 - 239
Target Start/End: Complemental strand, 3472755 - 3472545
Alignment:
Q  29 ttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 128  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||||    
T  3472755 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaaccagg 3472656  T
Q  129 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 228  Q
    ||||||||| |||||| | ||||| ||||||||||||  |||||     ||||||||  |||||||||||| ||||||||||||||| |||  | ||| |    
T  3472655 ttcaatctcattctaaatcatcatctaatctttaataaacatcttatagcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaattcaa 3472556  T
Q  229 catgctctctg 239  Q
    |||||||||||    
T  3472555 catgctctctg 3472545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 44 - 239
Target Start/End: Complemental strand, 22432597 - 22432402
Alignment:
Q  44 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttcta 143  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||| ||||| |||||||| ||||||    
T  22432597 gaagtgctcgcgaggcgaaagcatctgctcgccatggcgaggacaggccagaatcccaactaaagttgttctaagctaaaccagattcaatcttgttcta 22432498  T
Q  144 agttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||  | ||| ||||||||||||    
T  22432497 agtcatcatctaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacttaattcaacatgctctctg 22432402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 36819137 - 36818938
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  36819137 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 36819048  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | |||||||||||| ||| ||  ||  |||||||| ||| |||||||| ||||||||||||||||  |||| ||| ||    
T  36819047 tcaatcttgttctaaatcatcctctaatctttaataggcacctaaaggtactcaaaggcatttaaggttcaactcaaaagtcaaaaactcagaattcgac 36818948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 8761460 - 8761280
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| ||| |||  |||||||    
T  8761460 gcactcagttctggaagtgttcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattttcaactaaagttgttctaagctaatccaggtt 8761361  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 211  Q
    |||||| ||||||| | ||| | ||||||||||||  | |||  || ||||||||  |||||||||||| |||||||||||    
T  8761360 caatcttgttctaaatcatcctctaatctttaatacacgtctaaaggcactcaaaagcatctaaggttcaactcaaaagtc 8761280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 21305591 - 21305790
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||          ||||||    
T  21305591 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgtt----------ccaggt 21305680  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  ||||  || ||    
T  21305681 tcaatcttgttctaaatcatcctctaatctttagtaaacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaactcgac 21305780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 12647147 - 12647322
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          ||| |||    
T  12647147 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaagtt 12647236  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||   ||||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  12647237 caatctcgttctaaatcattccttaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 12647322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 16080273 - 16080197
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  16080273 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaa 16080197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 218
Target Start/End: Complemental strand, 45489571 - 45489394
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  45489571 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactcgccagatttccaactaaggttgtt----------ccaggtt 45489482  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaata 218  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||||||||||    
T  45489481 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaaata 45489394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 238
Target Start/End: Complemental strand, 20228636 - 20228440
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 131  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          ||||||||    
T  20228636 cactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttc 20228547  T
Q  132 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 231  Q
    |||||| |||||| | ||  |||||||  || || ||| ||  ||| |||||||| ||||||||||||  |||||||||||||||  |||| ||| ||||    
T  20228546 aatctcattctaaatcattctttaatcaatagtaggcacctaaagatactcaaaggcatctaaggttcatctcaaaagtcaaaaactcagaattcgacat 20228447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 216
Target Start/End: Original strand, 33797810 - 33797986
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| ||||||          ||||||    
T  33797810 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaattcccaactaaggttgtt----------ccaggt 33797899  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||| ||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  33797900 tcaatcttgttctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 33797986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 46975745 - 46975827
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  46975745 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagaaagaatcccaactaaggttgtt 46975827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 103
Target Start/End: Complemental strand, 17678416 - 17678343
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaac 103  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17678416 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaac 17678343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 18882645 - 18882820
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||||          |||||||    
T  18882645 gcactcagttcttgaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccaaaatcccaactaaggttgtt----------ccaggtt 18882734  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  18882735 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 18882820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 20091325 - 20091229
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    ||||||||||||| | |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| || | |||||||||||    
T  20091325 gacacagatcgcaatatcctcatttgcactcagttctggaagtgctcgcgaggtgagaacatctgctcgccatggcgagttcaggtcagaatcccaa 20091229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 216
Target Start/End: Original strand, 19212144 - 19212320
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||| ||||||          ||||||    
T  19212144 tgcactcagttttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattctcaactaaggttgtt----------ccaggt 19212233  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||||||||||| | ||  | |||||  || ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  19212234 tcaatctcgttctaattcattctctaatcaatagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 19212320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 23819126 - 23819052
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||    
T  23819126 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattcctactaa 23819052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 24782929 - 24782730
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          ||||||    
T  24782929 tgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggt 24782840  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||| ||| ||  |||||  ||  |||||||  |||||||||||| |||||||||| |||||  || | ||| ||    
T  24782839 tcaatcttgttctaactcatcctctaatcattagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagttaaaaactcaaaattcgac 24782740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 20138364 - 20138443
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||| ||||||    
T  20138364 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagtcagattcccaactaaggttgtt 20138443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 87
Target Start/End: Complemental strand, 22449100 - 22449037
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22449100 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 22449037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 45310194 - 45310016
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  45310194 gcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 45310105  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  45310104 caatcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 45310016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 21615718 - 21615777
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21615718 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 21615777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 16375284 - 16375223
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16375284 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 16375223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 21407635 - 21407696
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  21407635 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 21407696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 52639821 - 52639882
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  52639821 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 52639882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 33049911 - 33049833
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||  |||||| | |||||||| ||||||    
T  33049911 tcagttctggaagtgctcgcgaggcgagagcatctgcttgccatggcgattacttgccagatttccaactaaggttgtt 33049833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 21438081 - 21438154
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  21438081 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 21438154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 23763498 - 23763571
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  23763498 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 23763571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 18393791 - 18393613
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||| |||||  |||||||||||||||||||||| ||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  18393791 gcactccgttctataagtgctcgcgaggcgagagcaactgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 18393702  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  18393701 caatcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 18393613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 21162078 - 21162118
Alignment:
Q  48 tgctcgcgaggcgagagcatctgctcgccatggcgagtaca 88  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  21162078 tgctcgcgaggcgagagcctctgctcgccatggcgagtaca 21162118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 19063807 - 19063880
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||   || ||||||||||||||||| || ||  |||| |||||| ||||||    
T  19063807 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtaccagtcaatatccaaactaatgttgtt 19063880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 19111697 - 19111770
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||   || ||||||||||||||||| || ||  |||| |||||| ||||||    
T  19111697 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtaccagtcaatatccaaactaatgttgtt 19111770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 433322 - 433374
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  433322 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 433374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 20918916 - 20918952
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  20918916 gctcgcgaggcgagagcctctgctcgccatggcgagt 20918952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 21754346 - 21754386
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  21754346 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 21754386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 38801081 - 38801041
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaata 218  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  38801081 cactcaaagacatctaaagttcaactcaaaagtcaaaaata 38801041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 19105040 - 19105087
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||||||||||||||||||||||||   || |||||||||||||||||    
T  19105040 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 19105087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 33681325 - 33681359
Alignment:
Q  51 tcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||| |||||||||||||||||||    
T  33681325 tcgcgaggcgagagcctctgctcgccatggcgagt 33681359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 20138499 - 20138536
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  20138499 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 20138536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 20525032 - 20524987
Alignment:
Q  42 tggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||||||||||||||||||||||   || |||||||||||||||||    
T  20525032 tggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 20524987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 21615853 - 21615890
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21615853 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21615890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 21754477 - 21754518
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||| |||||||||| || |||||||||||||||||||    
T  21754477 cactcaaaaacatctaaggatcaactcaaaagtcaaaaatac 21754518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 1011001 - 1011057
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  1011001 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 1011057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 16080134 - 16080074
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||| |||| || |||| ||||||||||||||||  |||| ||| ||||||||||||    
T  16080134 actcaaaggcatccaatgttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 16080074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 20637164 - 20637200
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  20637164 gctcgcgaggcgagagcctctactcgccatggcgagt 20637200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 50210019 - 50209967
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| |||||||||| |||||||| || | |||||| ||||    
T  50210019 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaa 50209967  T

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Target: scaffold0131 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 36720 - 36934
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36720 catgcgacacagatcgtattttcctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 36819  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| || |||||| |||  || ||||||||||||||| |||||||||||||| |||||||||||| |||||| ||| |||||||| |||||||||||||     
T  36820 aacaaaggttgttctaagttaaaccaggttcaatctcattctaagttatcatataatctttaataagcatcttcaggcactcaaaaacatctaaggttca 36919  T
Q  201 actcaaaagtcaaaa 215  Q
    |||||||||||||||    
T  36920 actcaaaagtcaaaa 36934  T

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Target: scaffold0101 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 8809 - 8576
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  8809 gacacaggtcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 8710  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   || || |||||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||| ||||||||||||| |||||    
T  8709 atgttgttctaggttaaactaggttcaatctcgttctaagttatcatttaatctttaataggcatcttcagggactcaaaaacatctaaggttcaactca 8610  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    || ||||||||||| || || |||||||||||||    
T  8609 aaggtcaaaaataccgaattttacatgctctctg 8576  T

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Target: scaffold0004 (Bit Score: 146; Significance: 5e-77; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 70063 - 70272
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  70063 gacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 70162  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | | |||| ||   || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||    
T  70163 aggctgttctaggttaaaccaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactca 70262  T
Q  206 aaagtcaaaa 215  Q
    ||||||||||    
T  70263 aaagtcaaaa 70272  T

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Target: scaffold0004; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 10413 - 10214
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  10413 tgcactcatttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 10324  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  10323 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 10224  T

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Target: scaffold0004; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Complemental strand, 58237 - 58164
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  58237 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 58164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 12173068 - 12173285
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  12173068 tcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaataccaactaaagttgttctaagcta 12173167  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 221  Q
     ||||||||||||||| |||||||| ||||| ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||||||||||||||||    
T  12173168 aaccaggttcaatctcattctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacag 12173267  T
Q  222 atttctacatgctctctg 239  Q
    | ||| ||||||||||||    
T  12173268 aattcgacatgctctctg 12173285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 15060553 - 15060791
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||   |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15060553 catgcgacacagatcgcaacatcctaacttgcaatcagtcctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattcc 15060652  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    |||||| |||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  ||||||||||||     
T  15060653 aactaaggttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttca 15060752  T
Q  201 actcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||| |||||| ||| ||||||||||||    
T  15060753 actcaaaagtcaaaattacagaattcaacatgctctctg 15060791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 215
Target Start/End: Complemental strand, 15877680 - 15877471
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  15877680 gacactgatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 15877581  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   || ||||||||||||||||| ||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||    
T  15877580 aggttgttctaggttaaaccaggttcaatctcgtcctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactca 15877481  T
Q  206 aaagtcaaaa 215  Q
    ||||||||||    
T  15877480 aaagtcaaaa 15877471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 16369692 - 16369907
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |    
T  16369692 ctcacttgcactcagttctggaagtgctcgcgaggcgaaagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttctaagctaaa 16369791  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||  |||||||||||||||||||||||||||  |||||  |  ||||||||  |||||||||||| ||||||| ||||||| ||||||     
T  16369792 ccaggttcaatcttattctaagttatcatttaatctttaataaacatctttatgcactcaaaagcatctaaggttcaactcaaaggtcaaaattacagaa 16369891  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  16369892 ttcaacatgctctctg 16369907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 12496542 - 12496754
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||    
T  12496542 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaacca 12496641  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  12496642 ggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 12496741  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  12496742 aacatgctctctg 12496754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 856420 - 856635
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||| ||| ||| |    
T  856420 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccaaagcgagtacaagccagaataccaactaaaattgttctaagctaaa 856519  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
     ||||||||||||| |||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||| ||||||||||||||||||     
T  856520 acaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactaaaaagtcaaaaatacagaa 856619  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||| ||||||    
T  856620 ttcaacatgttctctg 856635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 14878357 - 14878124
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||| | |||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  14878357 gacacagatcgcaatatcctcaatcgcactcggttctggaagtgctctcgaggcgagaacatctgctcgccatggcgagtacgagccagaattccaacta 14878258  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||||| || ||| ||| |||||||||||||||  ||||||| ||||| ||||||||||||  |||||  || |||||||| |||| |||||||| |||||    
T  14878257 aagttattctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaaacatataaggttcaactca 14878158  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||| ||||||||||||    
T  14878157 aaagtcaaaaatacagaattcgacatgctctctg 14878124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 23408699 - 23408907
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |    
T  23408699 gacacagatcgcaatatcctcacttgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcaagattcccaacaa 23408798  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
      |||||| ||   || ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||| | | ||||||||||| |||||    
T  23408799 tggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcata-atatctaaggttcaactca 23408897  T
Q  206 aaagtcaaaa 215  Q
    ||||||||||    
T  23408898 aaagtcaaaa 23408907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 322876 - 323088
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| ||| ||| ||||    
T  322876 acttgcatttagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagaattccaacttaagttgttctaagctaaacca 322975  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||||||||||| | ||||| ||||||||||||  |||||  |  ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  322976 ggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaacgcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 323075  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  323076 aacatgctctctg 323088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 18383748 - 18383536
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||| ||| ||| ||||    
T  18383748 acttgcattcagttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgttctaagctaaacca 18383649  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    ||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  18383648 ggttcaatctcattctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 18383549  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  18383548 aacatgctctctg 18383536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 24 - 235
Target Start/End: Complemental strand, 26190843 - 26190632
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| |    
T  26190843 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactcaagttgttataagctaaa 26190744  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||| ||||||||| | ||| | ||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||| |     
T  26190743 ccaggttcaatcttgttctaagtcagcatcttatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaacacataa 26190644  T
Q  224 ttctacatgctc 235  Q
    ||| ||||||||    
T  26190643 ttcaacatgctc 26190632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 15051777 - 15052015
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||| ||   |||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  15051777 catgcgacacagatcacaacatcctaacttgcattcagtcctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattcc 15051876  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
     ||||| |||||| ||| |||  |||||||||||||| ||||||||||| |||||||||||||||  |||||  || ||||||||  ||||||||||||     
T  15051877 gactaaggttgttctaagctaatccaggttcaatctcattctaagttataatttaatctttaataaacatctttaggcactcaaaagcatctaaggttca 15051976  T
Q  201 actcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| |||| |||||| ||| ||||||||||||    
T  15051977 actcaaaagttaaaattacagaattcaacatgctctctg 15052015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 29 - 239
Target Start/End: Complemental strand, 11298358 - 11298148
Alignment:
Q  29 ttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 128  Q
    ||||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| |||||||| ||| ||| ||||||    
T  11298358 ttgcattcaattctggaagtgctcgcgaggcgagagcatctgatcgccatggcgagtacaagccagatttccaactcaagttgttctaagctaaaccagg 11298259  T
Q  129 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 228  Q
    |||||||| ||||||| | | ||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||| ||| |    
T  11298258 ttcaatcttgttctaaatcagcatctaatctttaataaacatctaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagaattcaa 11298159  T
Q  229 catgctctctg 239  Q
    |||||||||||    
T  11298158 catgctctctg 11298148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 12037787 - 12037596
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||  || ||  |    
T  12037787 ctcaattgcactcagttctggaagtgctcgcgaggcgagagcatcggctcgccatggcgagtacaagccagaattccaactaatgttgttcaaagcttaa 12037688  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||||||||||| ||||||||  |||| ||||||||||||||||||| ||| |||||||| ||||||||||||  ||||| | |||||||    
T  12037687 ccaggttcaatctcattctaagtcttcatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggtttaactcacatgtcaaaa 12037596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 23077330 - 23077097
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||||| ||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||      
T  23077330 gacacagatcgcaaaatcctcaattgaaatcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacct 23077231  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| || ||||||||||||  |||  || ||||| ||||||||||||  |||||  || ||||||||  |||| ||||||| |||||    
T  23077230 aagttgttctaagctaaactaggttcaatctcactctgtgtcatcatctaatctttaataaacatcttaaggcactcaaaagcatccaaggttcaactca 23077131  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||| ||||||||||||    
T  23077130 aaagtcaaaaatacagaattcaacatgctctctg 23077097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 19725761 - 19725531
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  19725761 acagatcgcaacatcctaacttgtattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagtcagaatcccaactaagg 19725662  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||||| ||| ||| |||||||||||||||||||||  | ||||| ||||||||| |   |||||  || ||| ||||  ||| |||||||| ||||||||    
T  19725661 ttgttctaagctaaaccaggttcaatctcgttctagatcatcatctaatctttattcaacatcttaaggcacacaaaagcatttaaggttcaactcaaaa 19725562  T
Q  209 gtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||| |||  | ||| ||||||||||||    
T  19725561 gtcaaaattacgaaattcaacatgctctctg 19725531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 22 - 239
Target Start/End: Complemental strand, 23052913 - 23052696
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||     
T  23052913 tcctcacttgcattcaattctgcaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaagctt 23052814  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 221  Q
     || || ||||||||| ||||||||   ||| |||| |||||||||||||  ||| |||||||| ||||||||||||| ||||| | |||||||  |||     
T  23052813 aactagtttcaatctcattctaagtctccatctaatatttaatatgcatcatcaggcactcaaaaacatctaaggttcaactcacaggtcaaaatcacaa 23052714  T
Q  222 atttctacatgctctctg 239  Q
    | ||| ||||||||||||    
T  23052713 aattcaacatgctctctg 23052696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 236
Target Start/End: Original strand, 11851842 - 11852067
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||    
T  11851842 acagatcgcaacatcctaacttgcacttagttctggaagtgcttacgaggcgagagcatctgatcgccatggcgagttcaagccagaattccaactaaag 11851941  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||   ||||  || ||||||||  |||||||||||| ||| ||||    
T  11851942 ttgttataagcta-accaggttcaatctcgttctaaatcatcatctaatctttaata-aaatcttaaggcactcaaaagcatctaaggttcaactgaaaa 11852039  T
Q  209 gtcaaaaatacagatttctacatgctct 236  Q
    || |||| |||  | ||| |||||||||    
T  11852040 gttaaaattacgaaattcaacatgctct 11852067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 17524949 - 17524794
Alignment:
Q  83 agtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactc 182  Q
    ||||||||||||| |||| ||||| |||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||  || ||  || |||||    
T  17524949 agtacaagccagattccctactaatgttgttttaaactaaaccaggttcaatctcattctaatttatcatttaatctttaataaccacctttaggcactc 17524850  T
Q  183 aaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    ||| ||||||||||||| ||||||||||||||||||| || |||||||||||||||    
T  17524849 aaaaacatctaaggttcaactcaaaagtcaaaaatactgaattctacatgctctct 17524794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 239
Target Start/End: Complemental strand, 326992 - 326794
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          |||||||    
T  326992 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggtt 326903  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    |||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||    
T  326902 caatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgaca 326803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 83 - 238
Target Start/End: Complemental strand, 321789 - 321634
Alignment:
Q  83 agtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactc 182  Q
    |||||| || ||| |||||||||| |||||| ||| ||| ||||||||||||||| |||||||||||||||||| ||||||||  |||||  || |||||    
T  321789 agtacaggctagattcccaactaatgttgttctaagctaaaccaggttcaatctcattctaagttatcatttaacctttaataaacatctttaggcactc 321690  T
Q  183 aaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    ||| ||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  321689 aaaaacatctaaggttcaactcaaaagtcaaaaatacagaattctacatgctctct 321634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 7793175 - 7792976
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  7793175 tgcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 7793086  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  || | ||| ||    
T  7793085 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgac 7792986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 15482939 - 15483138
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||          ||||||    
T  15482939 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccaaactaaggttgtt----------ccaggt 15483028  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||  | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  15483029 tcaatcttgttctaaatcattctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 15483128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 235
Target Start/End: Complemental strand, 15849914 - 15849719
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||          ||||||    
T  15849914 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaccaaggttgtt----------ccaggt 15849825  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||| ||| || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  15849824 tcaatcttgttctaaatcatcctctaatcattagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 15849725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 20461329 - 20461130
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||          ||||||    
T  20461329 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcctaactaaggttgtt----------ccaggt 20461240  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | | ||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  20461239 tcaatcttgttctaaatcatcctctgatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 20461140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 11863060 - 11863215
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||||||| || ||||||| ||  |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  11863060 acagatcgcaacatcctaacttgcactcaattttggaagtacttacgaggcgagagcatctgctcgccatggcgagttcaagccagaattccaactaaag 11863159  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaata 165  Q
    | ||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||    
T  11863160 tagttctaagcta-accaggttcaatctcgttctaaatcatcatctaatctttaata 11863215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 33 - 219
Target Start/End: Complemental strand, 1982636 - 1982460
Alignment:
Q  33 actcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttca 132  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          |||||||||    
T  1982636 actcagttctggaagtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttca 1982547  T
Q  133 atctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||| ||||||| | ||| | ||||||||| ||  |||||  ||  ||||||| ||||||||||||| ||||||||||| |||||||    
T  1982546 atcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaaacatctaaggttcaactcaaaagtccaaaatac 1982460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 1598308 - 1598226
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1598308 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 1598226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 17242250 - 17242425
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||    
T  17242250 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaggtt 17242339  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  17242340 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 17242425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 31097383 - 31097184
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||| || |||          ||||||    
T  31097383 tgcactcagttctggaagtgctcgcgaggcggtagcatctgctcgccatggcgagtacaagccagattcccaactaaggtcgtt----------ccaggt 31097294  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||  | ||||||||| || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  31097293 tcaatcttgttctaaatcattctctaatctttagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 31097194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 38814662 - 38814744
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38814662 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 38814744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 16797883 - 16797800
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  16797883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 16797800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 37 - 239
Target Start/End: Complemental strand, 3402777 - 3402585
Alignment:
Q  37 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatct 136  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||||    
T  3402777 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactacggttgtt----------ccaggttcaatct 3402688  T
Q  137 cgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctct 236  Q
     ||||||||| ||| | ||||||||||||  || ||  || ||||||||  |||||||||||| ||||||||||||||| |||| | ||| ||| |||||    
T  3402687 tgttctaagtcatcctctaatctttaatacacaactaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcgacaagctct 3402588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 16808710 - 16808627
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  16808710 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagcttcccaactaaggttgtt 16808627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 15941732 - 15941658
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15941732 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacta 15941658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 11594967 - 11594789
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||          |||||||    
T  11594967 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt----------ccaggtt 11594878  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  11594877 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 11594789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 95
Target Start/End: Original strand, 16910034 - 16910105
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 95  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16910034 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 16910105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 3833952 - 3834127
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||          ||||    
T  3833952 gcactcaaatctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaaccaaggttgttcta----------ggtt 3834041  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  ||||||||||||||||||||| ||||||||||||||||    
T  3834042 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaaa 3834127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 11300339 - 11300257
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  11300339 gcactcaattctggatgtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 11300257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 2897652 - 2897569
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||    
T  2897652 tgcactaagttctggaagtgctcgcgaggcgagagcatctgctcgtcatgtcgagtacaagccagattcccaactaaggttgtt 2897569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 42326222 - 42326304
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||    
T  42326222 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt 42326304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 16697071 - 16697152
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||||||    
T  16697071 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagctttccaactaaggttgtt 16697152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 16690498 - 16690579
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||  | |||||||| ||||||    
T  16690498 cactcacttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtaaaagccagctttccaactaaggttgtt 16690579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 20723288 - 20723361
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||    
T  20723288 tctggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagccagcttcccaactaatgttgtt 20723361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 7109981 - 7110042
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7109981 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 7110042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 7113916 - 7113977
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7113916 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 7113977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 11855015 - 11855088
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  11855015 cactcagttctggatttgctcgcgaggtgagagcatctgctcgccatggcgagtacaagccagcttcccaacta 11855088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 22337002 - 22337063
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22337002 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 22337063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 27409470 - 27409409
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27409470 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 27409409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 11557208 - 11557132
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttg 111  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||||| | |||||||| ||||    
T  11557208 tcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacttgccagatttccaactaaggttg 11557132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 15617656 - 15617717
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||    
T  15617656 cactcaattctggaagtgctcgcgaggcaagagcatctgctcgccgtggcgagtacaagcca 15617717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 22321947 - 22322008
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22321947 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 22322008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 24188064 - 24188137
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  24188064 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 24188137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 55149256 - 55149338
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||  ||||||||||||||||||||||||| |||| ||||||||||||||||||| |||   |||||||||| ||||||    
T  55149256 gcactcaaatctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaatccaacttcccaactaatgttgtt 55149338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 28950007 - 28950068
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||| || |||||||||||||||||||| ||||||||||||||||    
T  28950007 cactcaattctggaagtgctcacggggcgagagcatctgctcgccgtggcgagtacaagcca 28950068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 17525004 - 17524951
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggc 59  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  17525004 gacacagatcgcaatatcctcacttgcactcagttttggaagtgctcgcgaggc 17524951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 839533 - 839583
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 90  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  839533 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaag 839583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 16862979 - 16862926
Alignment:
Q  60 gagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||| ||||||    
T  16862979 gagagcatctgctcgccatggcgagtacaagccaaatccccaactaaggttgtt 16862926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 28350980 - 28350935
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||    
T  28350980 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagt 28350935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 3389763 - 3389719
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgc 75  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  3389763 gcacttagttctggaagtgctcgcaaggcgagagcatctgctcgc 3389719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 215
Target Start/End: Complemental strand, 3389691 - 3389600
Alignment:
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||||||| |||||| || ||| | ||||||||||||  || ||  || ||||||||  |||||||||||| |||||||||||||||    
T  3389691 ccaggttcaatcttgttctatgtcatcctctaatctttaatacacaactaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaa 3389600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 12340064 - 12340103
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  12340064 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 12340103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 1644493 - 1644453
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  1644493 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 1644453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 12852174 - 12852134
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  12852174 aagtgctcgcgaggcaagagcctctgctcgccatggcgagt 12852134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 13210138 - 13210098
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  13210138 aagtgctcgcgaggcgagagcctctactcgccatggcgagt 13210098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 16690635 - 16690675
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  16690635 actcaaaggcatctaaggttcaactcaaaagtcaaaaatac 16690675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 16697208 - 16697248
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||| |||||||||||| |||||||||||||||||||    
T  16697208 actcaaaggcatctaaggttcaactcaaaagtcaaaaatac 16697248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 17248092 - 17248040
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  17248092 ctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 17248040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 30030266 - 30030306
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaa 214  Q
    ||||||||||||| |||||||||||| ||||||||||||||    
T  30030266 cagacactcaaaggcatctaaggttcaactcaaaagtcaaa 30030306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 32307979 - 32308019
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  32307979 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 32308019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 49667894 - 49667854
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  49667894 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 49667854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 14665917 - 14665956
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  14665917 agtgctcgcgaggcgagagcctctgctcgccattgcgagt 14665956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 14669072 - 14669111
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  14669072 agtgctcgcgaggtgagagcctctgctcgccatggcgagt 14669111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 14735430 - 14735469
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||| ||||||    
T  14735430 agtgctcgcgaggcgagagcctctgctcgccattgcgagt 14735469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 20698243 - 20698192
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  20698243 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 20698192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 26687201 - 26687252
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  26687201 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 26687252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 30030153 - 30030188
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||| |||||||||||||||||||    
T  30030153 ctcgcgaggcgagagcctctgctcgccatggcgagt 30030188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 20698130 - 20698084
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    ||||||||||||  |||||||||||| ||||||||||||||| ||||    
T  20698130 cagacactcaaaagcatctaaggttcaactcaaaagtcaaaattaca 20698084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 4588494 - 4588457
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  4588494 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 4588457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 7986001 - 7986046
Alignment:
Q  48 tgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||    
T  7986001 tgctcgcgaggcgagagtacctactcgccatggcgagttcaagcca 7986046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 12340194 - 12340231
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  12340194 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 12340231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 13210007 - 13209966
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  13210007 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 13209966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 14179764 - 14179805
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  14179764 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 14179805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 14666047 - 14666084
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  14666047 cactcaacgacatctaaggttcaactcaaaagtcaaaa 14666084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 14669202 - 14669239
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  14669202 cactcaacgacatctaaggttcaactcaaaagtcaaaa 14669239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 14735560 - 14735597
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  14735560 cactcaacgacatctaaggttcaactcaaaagtcaaaa 14735597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 15941594 - 15941557
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15941594 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15941557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 16333460 - 16333532
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||| |   || ||||||||||||||||| || ||||| |  |||||||||||||    
T  16333460 tctggaagtgctcgcgaggcgagggttcctactcgccatggcgagtaccagacagaa-caaaactaaagttgtt 16333532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 16797744 - 16797707
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16797744 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16797707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 60 - 101
Target Start/End: Original strand, 16809724 - 16809765
Alignment:
Q  60 gagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||||||||||||| || | ||||||||||    
T  16809724 gagagcatctgctcgccatggcgagttcaggtcagaatccca 16809765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 239
Target Start/End: Complemental strand, 17674255 - 17674194
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||  |||||||||||| ||||||||||||||| |||  | ||| ||||||||||||    
T  17674255 cactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaattcaacatgctctctg 17674194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 38814800 - 38814837
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  38814800 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 38814837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 11165357 - 11165301
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  11165357 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 11165301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 217
Target Start/End: Complemental strand, 11557129 - 11557037
Alignment:
Q  125 caggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaat 217  Q
    |||||||||||| ||||||| | ||| | ||||||||||||  |||||   |  |||||||  |||||||||||| ||||||||||| |||||    
T  11557129 caggttcaatcttgttctaaatcatcctctaatctttaataaacatctatgggtactcaaaagcatctaaggttcaactcaaaagtccaaaat 11557037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 12934121 - 12934081
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||  |||||||||||||||||||    
T  12934121 aagtactcgcgaggcgagagtctctgctcgccatggcgagt 12934081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 30066227 - 30066283
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  30066227 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 30066283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 6370 - 6603
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  6370 gacacagatcgcaacatcctcacttgcacacagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagccagattcccaacta 6469  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  ||  |  ||  ||||||| ||||||||||||| |||||    
T  6470 aagttgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacaaatttaggaactcaaaaacatctaaggttcaactca 6569  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||| | ||| ||||||||||||    
T  6570 aaagtcaaaaatacaaaattcaacatgctctctg 6603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 142; Significance: 1e-74; HSPs: 6)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 239
Target Start/End: Complemental strand, 34766 - 34529
Alignment:
Q  2 atgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||| || ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34766 atgtgacaaaggtcgcaatgttctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccca 34667  T
Q  102 actaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttcta 201  Q
    |||||||||||| ||| ||| |||||||||||||||  ||||||| ||||| |||||||||| |   ||||  || |||||||| ||||||||||||| |    
T  34666 actaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttaaaaaaaatcttaaggcactcaaaaacatctaaggttcaa 34567  T
Q  202 ctcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||| |||||||||||||||| ||||||||||||||||    
T  34566 ctcacaagtcaaaaatacagaattctacatgctctctg 34529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 230
Target Start/End: Complemental strand, 41405 - 41181
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   | |||||||||||||||||||  |||||||| ||||| || ||||||||||||||||||||||||||||||||| |||||||||    
T  41405 gacacagatcgcaaagttctcacttgcactcagttctaaaagtgctcacgaggtgaaagcatctgctcgccatggcgagtacaagccagattcccaacta 41306  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| || ||||||||||||  ||||||| ||||| ||||||||||||   ||||  || ||||||||  |||||||||||| |||||    
T  41305 aagttgttctaagctaaactaggttcaatctcactctaagtcatcatctaatctttaataaatatctttaggcactcaaaatcatctaaggttcaactca 41206  T
Q  206 aaagtcaaaaatacagatttctaca 230  Q
     |||||||||||||||| |||||||    
T  41205 caagtcaaaaatacagaattctaca 41181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 64131 - 64213
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  64131 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 64213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 76015 - 76097
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  76015 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaatcctaactaaggttgtt 76097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 64269 - 64306
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  64269 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 64306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 76153 - 76190
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  76153 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 76190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 142; Significance: 1e-74; HSPs: 81)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 19863243 - 19863456
Alignment:
Q  2 atgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19863243 atgtgacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccca 19863342  T
Q  102 actaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttcta 201  Q
    || || |||||| ||   || || |||||||||||| ||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |    
T  19863343 acaaaggttgttctaggttaaacaaggttcaatctcattctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaa 19863442  T
Q  202 ctcaaaagtcaaaa 215  Q
    ||||||||||||||    
T  19863443 ctcaaaagtcaaaa 19863456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 22432519 - 22432733
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |    
T  22432519 gacacagatcgcaatatactaacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaa 22432618  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||||||||  |   || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||| ||||||||||||| |||||    
T  22432619 aagttgttcaaggttaaactaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcatgcactcaaaaacatctaaggttcaactca 22432718  T
Q  206 aaagtcaaaaataca 220  Q
    |||||||||| ||||    
T  22432719 aaagtcaaaactaca 22432733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 25642035 - 25641802
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||| |    
T  25642035 gacacagttcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagttcaagccagattcccaacaa 25641936  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   || || ||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||||| |||||    
T  25641935 aggttgttctatgttaaactaggttcaatctcgttctaagttatcatttaatctttaatatacatcttcaggcactcaaaaacatctaaggttcaactca 25641836  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||| ||| |||| | |  |||||||||||||    
T  25641835 aaagtccaaactacaaaatcttacatgctctctg 25641802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 21739879 - 21739641
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    ||||||||||||||||||   | |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  21739879 catgtgacacagatcgcaacattctcaattgtactcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagattccc 21739780  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    |||||| |||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||| ||  |||||  || |||||||| |||||||||||||     
T  21739779 aactaatgttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttagtaaacatctttaggcactcaaaaacatctaaggttca 21739680  T
Q  201 actcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||||| ||||| ||| ||||||||||||    
T  21739679 actcaaaagtcaaaaaaacagaattcaacatgctctctg 21739641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 220
Target Start/End: Original strand, 22439069 - 22439283
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | | ||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| || |    
T  22439069 gacacagatcgcaatattctcacttgcactcagttgtggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagattccctacaa 22439168  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||   || || ||||||||||||||| ||||||||||||||| ||||||||| ||||| ||| |||||||| ||||||||||||| |||||    
T  22439169 aagttgttctaggttaaactaggttcaatctcgttataagttatcatttaagctttaatatacatcttcaggcactcaaaaacatctaaggttcaactca 22439268  T
Q  206 aaagtcaaaaataca 220  Q
    |||||||||| ||||    
T  22439269 aaagtcaaaattaca 22439283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 21834739 - 21834509
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| ||||||||||    
T  21834739 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctactcgccatggtgattacaagccagaattccaactaaag 21834640  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||||| ||| ||| | |||||||||||||||||||| | ||||| ||||||||||||  ||| |  || ||||||||  |||||||||||| ||||||||    
T  21834639 ttgttctaagctaaatcaggttcaatctcgttctaaatcatcatctaatctttaataaacatttttaggcactcaaaagcatctaaggttcaactcaaaa 21834540  T
Q  209 gtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||| ||| ||||||||||||    
T  21834539 gtcaaaaatacagaattcaacatgctctctg 21834509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 27 - 239
Target Start/End: Complemental strand, 16523234 - 16523022
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| ||| ||| ||||    
T  16523234 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacttaagttgttctaagctaaacca 16523135  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    | |||||||||||||||| | || || ||||||||||||  |||||  || | ||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  16523134 gattcaatctcgttctaaatcattatctaatctttaataaacatcttaaggcgctcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 16523035  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  16523034 aacatgctctctg 16523022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 18907370 - 18907609
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||   | |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| | ||    
T  18907370 catgcgacacagatcgcaacattctcatttgcactctgttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgaaatcaagccagatttcc 18907469  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttcta-agttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttc 199  Q
    ||||||||||||| ||| |||  |||||||||||||| |||||  ||||||| |||||||||||||  |||||  ||  ||||||| |||||||||||||    
T  18907470 aactaaagttgttctaagctaagccaggttcaatctcattctagggttatcagttaatctttaatacacatctgaaggtactcaaaaacatctaaggttc 18907569  T
Q  200 tactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
     ||||||| || ||||||||||| ||| ||||||||||||    
T  18907570 aactcaaaggtaaaaaatacagaattcgacatgctctctg 18907609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 24 - 205
Target Start/End: Complemental strand, 22059577 - 22059396
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| | | |||| |||||| ||| ||| |    
T  22059577 ctcaattgcactcagttctagaagtgcttgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattcaacctaatgttgttctaagctaaa 22059478  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    ||||||||||||| ||||||| | || || ||||||||||||||||||| ||| |||||||| ||||||||||||| |||||    
T  22059477 ccaggttcaatcttgttctaaatcattatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactca 22059396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 18180780 - 18180965
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| |||||||| ||  ||| |||||||    
T  18180780 tgcattcagttctggaagtgctcgcgaggcgagagcatctgctctccatggcgagtacaagccagatttccaactcaagttgttctatgctaaaccaggt 18180879  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||| |||| |||||| | ||| | ||||||||||||  |||||  || |||||||| ||||||||||||| |||||||||||||||    
T  18180880 tcactctcattctaaatcatcctctaatctttaataaacatcttaaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 18180965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 15041384 - 15041169
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||| ||||||||||| | |||||||||||||||||||||| ||||||||||||||| |||| ||||||| | ||||||| ||   ||      
T  15041384 ctcacttgcactcaattctggaagtggttgcgaggcgagagcatctgctcgtcatggcgagtacaagtcagattcccaacaatagttgttctaggttaat 15041285  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||| |||||||||||||| ||| ||||| ||  ||||| ||| |||||||| |||||||||||   ||||||||||||||| |||| |     
T  15041284 ccaggttcaatctcattctaagttatcatctaacctttattaaacatcttcaggcactcaaaaacatctaaggtataactcaaaagtcaaaattacaaaa 15041185  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  15041184 ttcaacatgctctctg 15041169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 17804474 - 17804673
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  17804474 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 17804563  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  17804564 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 17804663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 16965167 - 16964957
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||| ||||   |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | ||    
T  16965167 catgcgacacagatcacattaaactcacttgcactaagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacaagccagacttcc 16965068  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    |||     ||||| ||   ||  |||||| ||||||||| |||||||||| |  | |||||| || |||||| ||| ||||||||| ||||||||||||     
T  16965067 aacattgattgttctaggttaatccaggtccaatctcgtcctaagttatcttcaattctttattaagcatcttcaggcactcaaagccatctaaggttca 16964968  T
Q  201 actcaaaagtc 211  Q
    |||||||||||    
T  16964967 actcaaaagtc 16964957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 22429859 - 22429660
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||          ||||||    
T  22429859 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccagctaaggttgtt----------ccaggt 22429770  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  || |||||| |  |||||||||||| ||||||||||||||||  |||| ||| ||    
T  22429769 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggcactcagaagcatctaaggttcaactcaaaagtcaaaaactcagaattcgac 22429670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 16924736 - 16924526
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||    
T  16924736 catgcgacacagatcgcattaaactcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttcc 16924637  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    |||     || || ||   ||  |||||| |||||| || ||||||||||||  | |||||| || |||||| |||  |||||||| ||||||||||||     
T  16924636 aacattgattattctaggttaatccaggtccaatcttgtcctaagttatcatcaattctttattaagcatcttcaggaactcaaaggcatctaaggttca 16924537  T
Q  201 actcaaaagtc 211  Q
    ||| |||||||    
T  16924536 actaaaaagtc 16924526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 6 - 100
Target Start/End: Original strand, 19873389 - 19873483
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19873389 gacacagatcgcaatatccttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 19873483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 216
Target Start/End: Complemental strand, 5616642 - 5616467
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||          |||||||    
T  5616642 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt----------ccaggtt 5616553  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  5616552 caatctcgttctaaatcattctataatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 5616467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 12496586 - 12496668
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  12496586 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 12496668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 214
Target Start/End: Complemental strand, 22405873 - 22405709
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttat 149  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| | ||| || |||||||| ||| ||| || ||||||||||||||||||| | ||    
T  22405873 ctcgcgaggcgaaagcatctgctcgccatggcgagtacaacccagatttccatctcaagttgttctaagctaaacaaggttcaatctcgttctaaatcat 22405774  T
Q  150 catttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaa 214  Q
    |||  |||||||| ||  |||||| || ||||| ||  |||||||||||| ||||||||||||||    
T  22405773 catccaatctttattaaacatctcaaggcactctaaagcatctaaggttcaactcaaaagtcaaa 22405709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 12706966 - 12707048
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  12706966 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgtt 12707048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 215
Target Start/End: Complemental strand, 27415771 - 27415596
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  27415771 tgcactcaattctggaagtgctcgcgaggcgagagcatccgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 27415682  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| ||||||| | ||| | |||| | || ||  || ||  ||  ||||||||||||||||||||| |||||||||||||||    
T  27415681 tcaatcttgttctaattaatcctctaatatctagtagacacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaa 27415596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 1587558 - 1587477
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  1587558 cactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaaggttgtt 1587477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 19663046 - 19663221
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||          |||||||    
T  19663046 gcactcagttttggaagtgctcgcgaggcgatagcatctgctcgccatggcgagtacaagccagaatcccaacaaaggttgtt----------ccaggtt 19663135  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  19663136 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 19663221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 22592628 - 22592550
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||    
T  22592628 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatttcaactaaggttgtt 22592550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 31 - 239
Target Start/End: Original strand, 1644983 - 1645181
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||||          |||||||    
T  1644983 gcactcaattctggatgtgctcgcgaggcgagagcatttgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggtt 1645072  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    ||||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| ||| |||||||| ||||||||||||||||  |||| ||| |||    
T  1645073 caatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatataaggttcaactcaaaagtcaaaaactcagaattcgaca 1645172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 16741484 - 16741548
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16741484 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 16741548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 6 - 102
Target Start/End: Complemental strand, 22334743 - 22334647
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||  | | |||||||||||    
T  22334743 gacacagatcgcaatatcctcacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtttaggtcagaatcccaa 22334647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 35 - 219
Target Start/End: Complemental strand, 19790603 - 19790429
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||| | |||||||  ||||||          |||||||||||    
T  19790603 tcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ccaggttcaat 19790514  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    || ||||||||| ||| | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||| ||||||| |||||||    
T  19790513 cttgttctaagtcatcctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactaaaaagtccaaaatac 19790429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 23657248 - 23657070
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  23657248 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 23657159  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||| | ||||| ||||||| | ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  23657158 caatcttgttctaaatcatcatctaatcttaagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 23657070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 27567436 - 27567355
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | |||||||| ||||||    
T  27567436 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaaggttgtt 27567355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 20803377 - 20803306
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  20803377 tcagttatggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaactaa 20803306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 21702568 - 21702647
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||| ||||||    
T  21702568 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaatttccaactaaggttgtt 21702647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 14472548 - 14472630
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||    
T  14472548 gcactcaattctggatgtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccaaattcccaactaaggttgtt 14472630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 18955591 - 18955509
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||| |||  ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| ||||||    
T  18955591 gcactcaattcgagaagtgctcgcgaggcgagagcatctgctcgtcatggcgagtacaagccagattcccaactaaggttgtt 18955509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 20907809 - 20907631
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||| | |||||||  ||||||          | |||||    
T  20907809 gcactcagttctggaagtgctcgtgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactatggttgtt----------ctaggtt 20907720  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||||| ||| | |||||| |||||  |||||  ||  | |||||  |||||||||||| ||||||||||| |||||||    
T  20907719 caatcttgttctaagtcatcctctaatctataatacacatctaaaggtattcaaaagcatctaaggttcaactcaaaagtccaaaatac 20907631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 27553435 - 27553265
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  |||||| | |||||||| ||||||          |||||||    
T  27553435 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgtgtacttgccagatttccaactaaggttgtt----------ccaggtt 27553346  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 211  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  ||||||| ||||| ||||||| |||||||||||    
T  27553345 caatcttgttctaaatcatcctctaatctttagtaaacatctaaaggtactcaaaaacatccaaggttcaactcaaaagtc 27553265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 32 - 239
Target Start/End: Complemental strand, 9482120 - 9481923
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 131  Q
    |||||| ||||||||||||||||||||||||||||| |||||| |||||| ||||||||||||  |||||||||| ||||||          ||||||||    
T  9482120 cactcaattctggaagtgctcgcgaggcgagagcatatgctcgtcatggcaagtacaagccaggttcccaactaaggttgtt----------ccaggttc 9482031  T
Q  132 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 231  Q
    |||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| |||||||| |||||||  |||| ||| ||||    
T  9482030 aatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaactcaaaaactcagaattcgacat 9481931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 25766997 - 25766914
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||| |||||||| |||  ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  25766997 tgcaatcagttctagaatggctcgtgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 25766914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 15894263 - 15894185
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    ||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||| || | |||||||||||    
T  15894263 ctcacttgcactcagttctggaagtgctcgcgaggtgagagactctgctcgccatggcgagttcaggtcagaatcccaa 15894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 22863224 - 22863286
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22863224 gcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 22863286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 25135492 - 25135438
Alignment:
Q  39 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25135492 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 25135438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 8244140 - 8244201
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8244140 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 8244201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 11567142 - 11567203
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  11567142 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 11567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 19870870 - 19870931
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  19870870 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 19870931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 23395348 - 23395409
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23395348 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 23395409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 211
Target Start/End: Complemental strand, 16929421 - 16929242
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||| |  |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||   | ||||| ||   ||  ||||||     
T  16929421 gcactcagttttcaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccagacttccaacattaattgttctaggttaatccaggtc 16929322  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtc 211  Q
    ||||||| | | ||||||||||  | |||||| || |||||| ||| ||||| ||| |||||||||||  |||||||||||    
T  16929321 caatctcatcccaagttatcatcaattctttattaagcatcttcaggcactc-aaggcatctaaggtttaactcaaaagtc 16929242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 12618671 - 12618610
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  12618671 cactcaattctggaagtgctcgcgaggcgagagcatctgctcaccgtggcgagtacaagcca 12618610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 18917093 - 18917012
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||| |||||||||||||||||||| |||||||||||| |||||||||||||||| | | |||||||| ||||||    
T  18917093 cactcaattctagaagtgctcgcgaggcgagaacatctgctcgccgtggcgagtacaagccaaatttccaactaaggttgtt 18917012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 23990200 - 23990261
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  23990200 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgtcgtggcgagtacaagcca 23990261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 31164704 - 31164611
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccag 94  Q
    |||| ||||||| |||||||   |||||||||||||| |||||||||| |||||||||| || |||| ||||| ||||||||||||||||||||    
T  31164704 catgcgacacaggtcgcattaaactcacttgcactcaattctggaagtactcgcgaggcaagggcatatgctcaccatggcgagtacaagccag 31164611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 25928584 - 25928635
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagc 91  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| |||||    
T  25928584 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagc 25928635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 49 - 101
Target Start/End: Complemental strand, 18821627 - 18821575
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    ||||||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  18821627 gctcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 18821575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 20803242 - 20803182
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  20803242 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcaacatgctctctg 20803182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 21939695 - 21939734
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  21939695 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 21939734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 34369792 - 34369742
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 90  Q
    ||||||||||||||||||||||||| |  | ||||||||||||||||||||    
T  34369792 tctggaagtgctcgcgaggcgagagtacatactcgccatggcgagtacaag 34369742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 102
Target Start/End: Complemental strand, 29808695 - 29808638
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||| |||||||||||||||| ||||||||||||||||||| || | |||| ||||||    
T  29808695 aagtactcgcgaggcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 29808638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 25766858 - 25766798
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||| |||||||||||| ||||||||||||||||  |||| ||  ||||||||||||    
T  25766858 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaatttgacatgctctctg 25766798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 28496284 - 28496244
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  28496284 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 28496244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 16372146 - 16372193
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||||||||||||||||||||||||   || |||||||||||||||||    
T  16372146 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 16372193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 20360767 - 20360716
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| || |||||||||||||||| || | ||||||||||    
T  20360767 ctcgcgaggcgagagcctcagctcgccatggcgagttcaggtcagaatccca 20360716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 87
Target Start/End: Original strand, 22331727 - 22331774
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    |||||||||||||||||||||||||   || |||||||||||||||||    
T  22331727 tctggaagtgctcgcgaggcgagagttcctactcgccatggcgagtac 22331774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 88
Target Start/End: Complemental strand, 31155205 - 31155166
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagtaca 88  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  31155205 gctcgcgaggcgagagcctctgctcgccatggagagtaca 31155166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 113
Target Start/End: Complemental strand, 2685121 - 2685087
Alignment:
Q  79 ggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||| ||||||    
T  2685121 ggcgagtacaagccagaatcccaactaaggttgtt 2685087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 22831932 - 22831974
Alignment:
Q  177 acactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||||  |||||||||||| |||||||||||||||||||    
T  22831932 acactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 22831974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 25603193 - 25603143
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 99  Q
    |||| |||||||||||| |||||||||||||| |||| |||| ||||||||    
T  25603193 gctcacgaggcgagagcctctgctcgccatggtgagttcaagtcagaatcc 25603143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 25611531 - 25611481
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 99  Q
    ||||||||||||||||| ||||||| ||||||||||| || | ||||||||    
T  25611531 gctcgcgaggcgagagcctctgctctccatggcgagttcaggtcagaatcc 25611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 25629161 - 25629123
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtaca 88  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  25629161 ctcgcgaggcgagagcctctgctcgccacggcgagtaca 25629123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 87
Target Start/End: Complemental strand, 34298441 - 34298395
Alignment:
Q  41 ctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||||||| |||||||||||  |||| |||||||||||||||||    
T  34298441 ctggaagtgcttgcgaggcgagattatctactcgccatggcgagtac 34298395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 1561745 - 1561786
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  1561745 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 1561786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 1587421 - 1587384
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  1587421 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 1587384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 2685031 - 2684994
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  2685031 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 2684994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 12707104 - 12707141
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  12707104 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 12707141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 15894109 - 15894072
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  15894109 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 15894072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 16741623 - 16741660
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  16741623 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 16741660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 16920323 - 16920282
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  16920323 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 16920282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 21702703 - 21702740
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  21702703 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 21702740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 25611402 - 25611365
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  25611402 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 25611365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 4185630 - 4185594
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  4185630 gctcgcgaggcgagagcctctactcgccatggcgagt 4185594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 4668020 - 4667984
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  4668020 gctcgcgaggcgagagcctctactcgccatggcgagt 4667984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 22080544 - 22080508
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  22080544 gctcgcgaggcgagagcctctactcgccatggcgagt 22080508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 214
Target Start/End: Complemental strand, 22334561 - 22334525
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaa 214  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  22334561 cactcaaaggcatctaaggttcaactcaaaagtcaaa 22334525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 139; Significance: 8e-73; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 175029 - 175243
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||||    
T  175029 catgcgacacagatcgcattttcctcacttggactcggttctggaagtgctcgcgaggtgagagcatctgctcgcaatggcgagtacaagccagattccc 175128  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| || |||||| ||   || ||||||||||||||| ||||||||||||||||||||| ||||| |||||||||| |||||||| |||||||||||||     
T  175129 aacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctctaataggcatctccaggcactcaaaaacatctaaggttca 175228  T
Q  201 actcaaaagtcaaaa 215  Q
    |||||||||||||||    
T  175229 actcaaaagtcaaaa 175243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 124899 - 124950
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  124899 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 124950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 18507 - 18740
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||| |||||| | |||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||    
T  18507 gacacatatcgcaatatcctcacttgcactcagttctggaagcgctcgtgaggcgagagcatttgctcgccatggcgagtacaagccagattccaaacta 18606  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | | |||| ||| ||| ||||||||||||||| |||||||||||||||||||||||||||  |||||  || |||||||| ||||||||||||| |||||    
T  18607 atgatgttctaagctaaaccaggttcaatctcattctaagttatcatttaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactca 18706  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||| |  ||||||||||||||||    
T  18707 aaagtcaaaaatacggtattctacatgctctctg 18740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 76998 - 76917
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||| || ||||||    
T  76998 cactcaattctggaagtgctcgcgaggcgagagcatctgcttgccatggcgagtacaagccagcttcccaacgaaggttgtt 76917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 6 - 206
Target Start/End: Original strand, 32701 - 32901
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| |||||||||    
T  32701 gacacagatcgcgatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcaacatgtcgagtacaagccagattcccaacta 32800  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||    
T  32801 atgttgttctaagctaaaccaggttcaatctcgttctaagttatcatttaatctttaataggcatcttcaggcactcaaaaacatctaaggttcaactca 32900  T
Q  206 a 206  Q
    |    
T  32901 a 32901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 8778 - 8839
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8778 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 8839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 220
Target Start/End: Original strand, 20245 - 20464
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||| ||||    
T  20245 catgcgacacagattacattatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaactcagattccc 20344  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||| || |||||| ||   || ||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||     
T  20345 aacaaaggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaataggcatctccaggcactcaaaaacatctaaggttca 20444  T
Q  201 actcaaaagtcaaaaataca 220  Q
    ||||||||||||||| ||||    
T  20445 actcaaaagtcaaaactaca 20464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 136; Significance: 5e-71; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 13043 - 13258
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| || ||| ||| |    
T  13043 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacgagccataatcccaactaaagttattctaagctaaa 13142  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    |||||||||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||| |     
T  13143 ccaggttcaatctcattctatgttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacataa 13242  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  13243 ttcaacatgctctctg 13258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 61439 - 61378
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  61439 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 61378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 65348 - 65294
Alignment:
Q  39 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  65348 ttctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgaatacaagcca 65294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 6935 - 6697
Alignment:
Q  1 catgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccc 100  Q
    |||| |||||||||||||   | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6935 catgcgacacagatcgcaacattctcaattgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccc 6836  T
Q  101 aactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttct 200  Q
    ||||||||||||| ||| ||| |||||||||||||||  ||||||| ||||| ||||||||| |    ||||  || |||||||| |||||||||||||     
T  6835 aactaaagttgttctaagctaaaccaggttcaatctcactctaagtcatcatctaatctttatttattatctttaggcactcaaaaacatctaaggttca 6736  T
Q  201 actcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||||||||||||| ||| ||||||||||||    
T  6735 actcaaaagtcaaaaatacagaattcgacatgctctctg 6697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 134; Significance: 7e-70; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 48316 - 48103
Alignment:
Q  2 atgtgacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    ||||||||||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  48316 atgtgacacagatcgcaatattcttacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattccta 48217  T
Q  102 actaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttcta 201  Q
    || |  |||||| ||   || ||||||||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||      
T  48216 acaatggttgttctaggttaaaccaggttcaatctcattctaagttatcatttaatctttaatatacatcttcagacactcaaaaacatctaaggttcat 48117  T
Q  202 ctcaaaagtcaaaa 215  Q
    ||||||||||||||    
T  48116 ctcaaaagtcaaaa 48103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 19582 - 19616
Alignment:
Q  51 tcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||| |||||||||||||||||||    
T  19582 tcgcgaggcgagagcctctgctcgccatggcgagt 19616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 134; Significance: 7e-70; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 14939 - 15171
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  14939 gacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccatcta 15038  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| |||||||||||||||| ||||||||||||| | ||||||||||  |||||  || |||||||| ||||||||||||| |||||    
T  15039 aagttgttctaagctaaaccaggttcaatctcg-tctaagttatcatcttatctttaataaacatctttaggcactcaaaaacatctaaggttcaactca 15137  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||| ||||| | ||| ||| ||||||||||||    
T  15138 aaagtaaaaaaaatagaattcaacatgctctctg 15171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 23954 - 24189
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  23954 gacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagactcccaacta 24053  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| ||||||||||||||||| |||||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||  |||||    
T  24054 aagttgttctaagctaaaccaggttcaatctcgt-ctaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggtttaactca 24152  T
Q  206 aaagtcaaaaata---cagatttctacatgctctctg 239  Q
    ||||| ||||| |   |||| ||| ||||||||||||    
T  24153 aaagtaaaaaaaaaaacagaattcaacatgctctctg 24189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #3
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 39378 - 39613
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||| ||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||    
T  39378 gacacagattgcagtatcctcactggcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagactcccaacta 39477  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| ||||||||||||||||| |||||||||||| ||||||||||||  |||||  || |||||||| ||||||||||||  |||||    
T  39478 aagttgttctaagctaaaccaggttcaatctcgt-ctaagttatcatctaatctttaataaacatctttaggcactcaaaaacatctaaggtttaactca 39576  T
Q  206 aaagtcaaaaata---cagatttctacatgctctctg 239  Q
    ||||| ||||| |   |||| ||| ||||||||||||    
T  39577 aaagtaaaaaaaaaaacagaattcaacatgctctctg 39613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 27 - 239
Target Start/End: Original strand, 1778 - 1990
Alignment:
Q  27 acttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactatacca 126  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||    
T  1778 acttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaagttgttctaagctaaacca 1877  T
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||||| |||||| |||    
T  1878 ggttcaatctcgttctaaatcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacagaattc 1977  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  1978 aacatgctctctg 1990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 13911 - 13696
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||| ||| |    
T  13911 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaagttggtctaagctaaa 13812  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||  | ||||| ||||| ||||||||||||   ||||  || |||||||| || |||||||||| |||||||||||||||||||| |     
T  13811 ccaggttcaatctcactataagtcatcatctaatctttaataaatatctttaggcactcaaaaacctctaaggttcaactcaaaagtcaaaaatacaaaa 13712  T
Q  224 ttctacatgctctctg 239  Q
    ||||||||||||||||    
T  13711 ttctacatgctctctg 13696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 18305 - 18072
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  18305 gacacaaatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtactagccagattcccaacta 18206  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | ||| || ||| ||| |||||||||||| || ||||||||||||||| |||  ||||||  |||||  || |||||||| ||||||||||||| ||||     
T  18205 atgttattctaagctaaaccaggttcaatttcattctaagttatcattaaattattaataaacatctttaggcactcaaaaacatctaaggttcaactct 18106  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| || ||| ||||||||||||||||    
T  18105 aaagtcaaaattatagaattctacatgctctctg 18072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 130; Significance: 2e-67; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 65645 - 65412
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||| |||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||| |    
T  65645 gacaaagatcgcaatatcctcacttgcactcagttctggaagtgctcacgaggcgagagcatctgctcgccatggcgagtacaagccagatccccaacaa 65546  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   || |||||||||||||| ||||||||||||||||||||||||||||   |||| ||| |||||||| ||||||||||||| |||||    
T  65545 aggttgttctaggttaaaccaggttcaatcttgttctaagttatcatttaatctttaataaatatcttcaggcactcaaaaacatctaaggttcaactca 65446  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| |||| | |  |||||||||||||    
T  65445 aaagtcaaaactacaaaatcttacatgctctctg 65412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 53842 - 54041
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  53842 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 53931  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||  |||| ||| ||    
T  53932 tcaatcttgttctaaatcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcaac 54031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 2161 - 2376
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||| ||| |    
T  2161 ctcacttgcactcagttctcgaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaatcccaactaaaattgttctaagctaaa 2260  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||  |||| ||| |||||||||||||||||  |||||  || ||||||||  |||||||||||| ||||||| ||||||||||||||     
T  2261 ccaggttcaatctcagtctaggttctcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaggtcaaaaatacagaa 2360  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||| ||||||    
T  2361 ttcaacatgttctctg 2376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0615 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0615
Description:

Target: scaffold0615; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 1918 - 1703
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||| ||| |    
T  1918 ctcatttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaactaaagttgttctaagctaaa 1819  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||||||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||| ||||||| |||| |     
T  1818 ccaggttcaatctcgttctaaatcatcatctaatctttaatacacatcttaaggcactcaaaagcatctaaggttcaactcaaaggtcaaaattacaaaa 1719  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  1718 ttcgacatgctctctg 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 3128 - 3339
Alignment:
Q  28 cttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccag 127  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||| ||| |||||    
T  3128 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagaattccaacttaagttgttctaagctaaaccag 3227  T
Q  128 gttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttct 227  Q
    || ||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||  |||     
T  3228 gtgcaatctcattctaggttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacaggattca 3327  T
Q  228 acatgctctctg 239  Q
    ||||||||||||    
T  3328 acatgctctctg 3339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 28 - 239
Target Start/End: Original strand, 6794 - 7005
Alignment:
Q  28 cttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccag 127  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||| |||||||| ||| ||| |||||    
T  6794 cttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggaaagtacaagccagaattccaacttaagttgttctaagctaaaccag 6893  T
Q  128 gttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttct 227  Q
    || ||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||| | |||     
T  6894 gtgcaatctcattctaggttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaaaacaaaattca 6993  T
Q  228 acatgctctctg 239  Q
    ||||||||||||    
T  6994 acatgctctctg 7005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 1607 - 1845
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |    
T  1607 gacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatgacgagtacaagccagactcccaacaa 1706  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||   |  |||||||||||| || |||||||||||| ||||||||||||||  ||||| ||| |||||||| ||||||||||||| |||||    
T  1707 aggttgttctaggtttaaccaggttcaatgtctttctaagttatcctttaatctttaataaacatcttcaggcactcaaaaacatctaaggttcaactca 1806  T
Q  206 aaagtcaaaaatacagatttctacatgctctctgctcct 244  Q
    |||||||||| |||  | |  ||||||||||||| ||||    
T  1807 aaagtcaaaattacgaaatcttacatgctctctggtcct 1845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 15973 - 16009
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  15973 gctcgcgaggcgagagcctctgctcgccatggcgagt 16009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 16201 - 15968
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||    ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || |    
T  16201 gacacagatcgcaacaacctcacttgcactcaattctggaagtgctcgcgaggcgagggcatctgctcgccatggcgagtacaagccagattccctacca 16102  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    | |||||| ||| ||| ||| ||||||||||| ||||||  |||||||||||||||||||  |||||  || |||||||| ||||||||||||| |||||    
T  16101 atgttgttctaagctaaacctggttcaatctcattctaaactatcatttaatctttaataaacatctttaggcactcaaaaacatctaaggttcaactca 16002  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||| ||||||||||| ||| ||||||||||||    
T  16001 aaagtaaaaaatacagaattcaacatgctctctg 15968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 24 - 239
Target Start/End: Original strand, 4712 - 4927
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||| ||| |    
T  4712 ctcacttgaactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaatcccaaataaagttgttctaagctaaa 4811  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  ||| |||||||| ||||||||||||||| ||||||     
T  4812 ccaggttcaatcttgttctaagtcatcatctaatctttaataaacatctttaggcactcaaaagcatttaaggttcaactcaaaagtcaaaattacagaa 4911  T
Q  224 ttctacatgctctctg 239  Q
     |  ||||||||||||    
T  4912 cttcacatgctctctg 4927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 24 - 238
Target Start/End: Original strand, 7575 - 7789
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| |||||  || ||| |    
T  7575 ctcacttgcactcagttttggaagtgctcgcgaggcgagagcatttgctcgccacggcgagtccaagccagaatcccaactaaaattgttccaagctaaa 7674  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||  ||||||||||||||||||||||||||  |||||  || ||||||||  |||||||||||| ||||||| ||||||||||||||     
T  7675 ccaggttcaatctcagtctaagttatcatttaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactcaaaggtcaaaaatacagaa 7774  T
Q  224 ttctacatgctctct 238  Q
    ||| ||||| |||||    
T  7775 ttcaacatgttctct 7789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 238
Target Start/End: Original strand, 660 - 889
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||| |||    
T  660 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcaccatggcgagtacaagccagatttccaactcaag 759  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||||| ||||||| |||||||||||||||||||||| | ||||| ||||||||||||  ||||   ||  |||||||  |||||||||||| ||||||||    
T  760 ttgttctaaactaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaacatcattaggtactcaaaagcatctaaggttcaactcaaaa 859  T
Q  209 gtcaaaaatacagatttctacatgctctct 238  Q
    ||||||| |||||| ||| |||||||||||    
T  860 gtcaaaattacagaattcaacatgctctct 889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 122; Significance: 1e-62; HSPs: 2)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 5872 - 6081
Alignment:
Q  29 ttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 128  Q
    ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||  || ||| ||||||    
T  5872 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaactaaggttgttcgaagctaaaccagg 5971  T
Q  129 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 228  Q
    |||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||||| ||| |    
T  5972 ttcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaacacagaattcga 6071  T
Q  229 catgctctct 238  Q
    ||||||||||    
T  6072 catgctctct 6081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 29 - 238
Target Start/End: Original strand, 7067 - 7276
Alignment:
Q  29 ttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 128  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||  || ||| ||||||    
T  7067 ttgcattcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattacaactaaagttgttcaaagctaaaccagg 7166  T
Q  129 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 228  Q
    |||||||| ||||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||| ||||| ||| |    
T  7167 ttcaatcttgttctaagtcatcatctaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaacacagaattcga 7266  T
Q  229 catgctctct 238  Q
    ||||||||||    
T  7267 catgctctct 7276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0412 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0412
Description:

Target: scaffold0412; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 236
Target Start/End: Complemental strand, 6261 - 6038
Alignment:
Q  13 atcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgt 112  Q
    |||||| | |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||    
T  6261 atcgcaatatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaaaattccaacttaagttgt 6162  T
Q  113 tttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtca 212  Q
    | ||| ||| |||| |||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| ||||||||||||    
T  6161 tctaagctaaaccaagttcaatctcattctaaatcatcatctaatctttaataaacatctgaaggcactcaaaagcatctaaggttcaactcaaaagtca 6062  T
Q  213 aaaatacagatttctacatgctct 236  Q
    ||| |||||| ||| |||||||||    
T  6061 aaagtacagaattcaacatgctct 6038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 15521 - 15298
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||| || | |||||||||||||| |||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||| |    
T  15521 gacacagatcacaatatcctcacttgcactaagttctagaagtgatcgcgaggcgagagcatctgcttgccatggcgagtacaagccagattcccaacaa 15422  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||          |||||||||||||||||||||||||||||||||||||||  |||||  |  |||||||| ||||||||||||| |||||    
T  15421 aagttgttcta----------ggttcaatctcgttctaagttatcatttaatctttaatagacatctttaagcactcaaaaacatctaaggttcaactca 15332  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||| ||||||||||| ||||||||||||||||    
T  15331 aaagtaaaaaatacagaattctacatgctctctg 15298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 126 - 239
Target Start/End: Complemental strand, 10553 - 10440
Alignment:
Q  126 aggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagattt 225  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| ||  |||||||| ||||||||||||| |||||||||||||||||||||| ||    
T  10553 aggttcaatctcgttctaagttttcatttaatctttaataggcatcttcaagcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacagaatt 10454  T
Q  226 ctacatgctctctg 239  Q
    ||||||||||||||    
T  10453 ctacatgctctctg 10440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 22 - 215
Target Start/End: Complemental strand, 6145 - 5952
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| ||     
T  6145 tcctcacttgcattcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgttctaagctt 6046  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
     |||||||||||||||  |||||||  |||| ||||||||||||||||||| ||| |||||||| ||||||||||||| ||||| | |||||||    
T  6045 aaccaggttcaatctcaatctaagtcttcatctaatctttaatatgcatcttcaggcactcaaaaacatctaaggttcaactcacaggtcaaaa 5952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 46579 - 46346
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||| |||||||||||||||||||||||||||||||| |||||||| || || ||||||||||||||||||||| ||| |||||    
T  46579 gacacagatcgcaacatcctaacttgcactcagttctggaagtgctcgcgaggagagagcatttggtcaccatggcgagtacaagccagattcctaacta 46480  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| |||| ||||||||||  ||||||| ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||    
T  46479 aagttgttctaagctaaaccaagttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcactcaaaagcatctaaggttcaactca 46380  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||| | ||| ||||||||||||    
T  46379 aaagtcaaaaatacataattcaacatgctctctg 46346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 24 - 237
Target Start/End: Complemental strand, 23501 - 23288
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||| |    
T  23501 ctcacttgcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagaacaagccagattcccaactaaagttgttctaagctaaa 23402  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||||||||||||||  ||||||| ||||| ||||||||||||  |||||  ||  ||| ||| | ||||| ||||| ||||||||||||||| ||||||     
T  23401 ccaggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggtactaaaaaatatctatggttcaactcaaaagtcaaaagtacagaa 23302  T
Q  224 ttctacatgctctc 237  Q
    ||| ||||||||||    
T  23301 ttcaacatgctctc 23288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 38289 - 38119
Alignment:
Q  69 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 168  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||| ||| || | ||||||||||  ||||||| ||||| ||||||||||||  |    
T  38289 tgctcgccatggcgagtacaagccagattcccaactaaagttgttctaagctaaactatgttcaatctcactctaagtcatcatgtaatctttaataaac 38190  T
Q  169 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||  ||  ||||||| |||| || ||||| ||||||||||||||| |||||| ||| ||||||| ||||    
T  38189 atctttaggtactcaaaaacatatatggttcaactcaaaagtcaaaagtacagaattcaacatgctttctg 38119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 38331 - 38283
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgc 54  Q
    |||||||||||||   | |||||||||||| ||||||||||||||||||    
T  38331 gacacagatcgcaaagttctcacttgcacttagttctggaagtgctcgc 38283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0425 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0425
Description:

Target: scaffold0425; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 440 - 657
Alignment:
Q  22 tcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaacta 121  Q
    |||| |||||||||||||||| |||||||| |||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  440 tcctaacttgcactcagttctagaagtgcttgcgaggagagagcatctactcgccatggcgagtacaagccagaattccaactaaagttgttctaagcta 539  T
Q  122 taccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacag 221  Q
     |||||||||||||||||||||||| ||| | ||| | ||||||  |||||  |  ||||||||  |||||| ||||| |||||||||||||||||||||    
T  540 aaccaggttcaatctcgttctaagtcatcgtctaaccattaataaacatctttatgcactcaaaagcatctagggttcaactcaaaagtcaaaaatacag 639  T
Q  222 atttctacatgctctctg 239  Q
    | ||| ||||||||||||    
T  640 aattcaacatgctctctg 657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 16949 - 16740
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||| ||| ||| |||| ||    
T  16949 tgcactcggttcttgaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacatgccagattcccaactaaggttgttctaagctaaaccaagt 16850  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||||| ||||| |||| |||||||  |||||  || ||||||||  |||||||| ||| |||||||||||||||| ||||| ||||||    
T  16849 tcaatcttgttctaagtcatcatctaatatttaataaacatcttaaggcactcaaaagcatctaagcttcaactcaaaagtcaaaaacacagaattctac 16750  T
Q  230 atgctctctg 239  Q
    ||||||||||    
T  16749 atgctctctg 16740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 44 - 215
Target Start/End: Original strand, 26706 - 26877
Alignment:
Q  44 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttcta 143  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |  |||||| ||   || ||||||||||||||| |||||    
T  26706 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaatggttgttctaggttaaaccaggttcaatctcattcta 26805  T
Q  144 agttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  26806 agttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 26877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold1895
Description:

Target: scaffold1895; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 239
Target Start/End: Complemental strand, 1037 - 867
Alignment:
Q  69 tgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgc 168  Q
    ||||||||||||||||||| ||||||| |||||||||| |||||| ||| ||| || |||||||||||| ||||||||||||||||||||||||||| ||    
T  1037 tgctcgccatggcgagtactagccagattcccaactaatgttgttctaagctaaactaggttcaatctcattctaagttatcatttaatctttaataggc 938  T
Q  169 atctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||| ||| |||||||| ||||||||||||| |||||||||||||||||||| | ||||||||||||||||    
T  937 atcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaatacataattctacatgctctctg 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1895; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 1079 - 1031
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgc 54  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  1079 gacacagatcgcaatatcctcacttgcactcagttctggaagtgctcgc 1031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 111; Significance: 4e-56; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 239
Target Start/End: Complemental strand, 21418 - 21188
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |    
T  21418 acagatcgcaacatcctaacttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccacggcgagtacaagccagaattccaactaagg 21319  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaa 208  Q
    ||| | ||| ||| ||||||||||||||| | |||  ||||||||||||| ||||||  |||||  ||  ||| ||| ||||||||||||| ||||||||    
T  21318 ttgctctaagctaaaccaggttcaatctcatcctacattatcatttaatccttaatacacatcttaaggtactaaaaaacatctaaggttcaactcaaaa 21219  T
Q  209 gtcaaaaatacagatttctacatgctctctg 239  Q
    || ||||||| ||| ||| ||||||||||||    
T  21218 gtaaaaaatatagaattcgacatgctctctg 21188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 48 - 85
Target Start/End: Complemental strand, 80139 - 80102
Alignment:
Q  48 tgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||| ||||||||||||| |||||    
T  80139 tgctcgcgaggcgagagcctctgctcgccatgtcgagt 80102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 1160 - 1393
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||   |||| | ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||     
T  1160 gacacagatcgcaacatcctaatttgcattcagttctagaagtgctcgcgaggcgagaacatctgctcgccatggcgagtacaagccagatttccaactc 1259  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| | ||||||||||||| |||||| | ||||| ||||||||||||  |||||  || ||||||||  |||||||||||| |||||    
T  1260 aagttgttctaagctaaatcaggttcaatctcattctaaatcatcatctaatctttaatagacatcttaaggcactcaaaagcatctaaggttcaactca 1359  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||| || ||| ||| ||||||||||||    
T  1360 aaagtcaaaattatagaattcgacatgctctctg 1393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 239
Target Start/End: Complemental strand, 4785 - 4552
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||| |||||| | |||||| |||||||| ||| ||||| |||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||||    
T  4785 gacacaaatcgcaatgtcctcaattgcactcggttttggaaatgctcgcgaggcgagagcatcttctcaccatgacgagtacaagccagaattccaacta 4686  T
Q  106 aagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactca 205  Q
    |||||||| ||| ||| ||| |||||||||||  ||||||| ||||| ||||||||||||  |||||  || || ||||| | ||||||||||| |||||    
T  4685 aagttgttctaagctaaacccggttcaatctcactctaagtcatcatctaatctttaataaacatctttaggcattcaaaaatatctaaggttcaactca 4586  T
Q  206 aaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||||| ||| |||||| |||||    
T  4585 aaagtcaaaaatacagaattcaacatgcgctctg 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 102; Significance: 9e-51; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 30573 - 30364
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||  ||||||| ||| ||| |||||||    
T  30573 tgcactcagttctgtaagtgctcgcgaggcgagagcatctgctcgccatggcgagtataagccagatttccaactccagttgttctaagctaaaccaggt 30474  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||||||||||| | ||||| ||||||||| ||   ||||  || ||||||||  |||||||||||| ||||||||||||||| |||  | ||| ||    
T  30473 tcaatctcgttctaaatcatcatctaatctttattaaagatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaattacgaaattcaac 30374  T
Q  230 atgctctctg 239  Q
    ||||||||||    
T  30373 atgctctctg 30364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 2157 - 2216
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2157 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 2216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 2292 - 2329
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  2292 actcaaagacatctaaggttcaactcaaaagtcaaaaa 2329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 101; Significance: 4e-50; HSPs: 4)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 4011 - 4167
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||| |    
T  4011 acagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatggcgagtacaagctagattcccaactaatg 4110  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaata 165  Q
    ||||| ||| ||| ||||||||||||||| ||||||| |||||||||||| ||||||    
T  4111 ttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcattaata 4167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 9 - 165
Target Start/End: Original strand, 8442 - 8598
Alignment:
Q  9 acagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaag 108  Q
    ||||||||||   |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||| |||||||||| |    
T  8442 acagatcgcaacatcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatttactcgccatggcgagtacaagctagattcccaactaatg 8541  T
Q  109 ttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaata 165  Q
    ||||| ||| ||| ||||||||||||||| ||||||| |||||||||||| ||||||    
T  8542 ttgttctaagctaaaccaggttcaatctcattctaagctatcatttaatcattaata 8598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 4181 - 4219
Alignment:
Q  201 actcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  4181 actcaaaagtcaaaagtacagaattctacatgctctctg 4219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 239
Target Start/End: Original strand, 8612 - 8650
Alignment:
Q  201 actcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  8612 actcaaaagtcaaaagtacagaattctacatgctctctg 8650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 98; Significance: 2e-48; HSPs: 5)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 37 - 222
Target Start/End: Complemental strand, 191102 - 190917
Alignment:
Q  37 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatct 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| ||   || ||||||||||||||    
T  191102 agttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaattttgttctaggttaaaccaggttcaatct 191003  T
Q  137 cgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacaga 222  Q
    | |||||||||||||||||||| ||  ||  |||||  || |||||||| ||||||||||||  |||||||||||||||| |||||    
T  191002 cattctaagttatcatttaatcatttctaaacatctttaggcactcaaaaacatctaaggttgaactcaaaagtcaaaaacacaga 190917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 30 - 222
Target Start/End: Complemental strand, 192812 - 192620
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||  ||||| ||   || |||||||    
T  192812 tgcacttagatctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaacaaagtttgttctaggttaaaccaggt 192713  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacaga 222  Q
    ||||||||  ||||||||||||||||||| ||  ||  |||||  || |||||||| ||||||||||||  |||||||||||||||| |||||    
T  192712 tcaatctcaatctaagttatcatttaatcatttctaaacatctttaggcactcaaaaacatctaaggttgaactcaaaagtcaaaaacacaga 192620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 56376 - 56457
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  56376 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 56457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 15056 - 14963
Alignment:
Q  126 aggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||||||||||||||||  |  | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  15056 aggttcaatctcgttctaagtctttctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 14963  T

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Target: scaffold0017; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 19578 - 19485
Alignment:
Q  126 aggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||||||||||||||||  |  | ||||||||||||  |||||  ||  |||||||  |||||||||||| ||||||||||| |||||||    
T  19578 aggttcaatctcgttctaagtctttctctaatctttaatacacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaaatac 19485  T

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Target: scaffold0327 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 29 - 239
Target Start/End: Original strand, 566 - 766
Alignment:
Q  29 ttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccagg 128  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |  ||| ||          |||||    
T  566 ttgcattcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagctagaattccaacaatggttatt----------ccagg 655  T
Q  129 ttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttcta 228  Q
    |||||||| ||||||||| ||||| ||||||||| ||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||||||||| |    
T  656 ttcaatcttgttctaagtcatcatctaatctttattaaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacagatttcaa 755  T
Q  229 catgctctctg 239  Q
    |||||||||||    
T  756 catgctctctg 766  T

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Target: scaffold0346 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0346
Description:

Target: scaffold0346; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 15374 - 15490
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| ||| |||||||    
T  15374 tgcactcagttctgaaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatttcaactaaagttgttctaagctaaaccaggt 15473  T
Q  130 tcaatctcgttctaagt 146  Q
    ||||||| |||||||||    
T  15474 tcaatcttgttctaagt 15490  T

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Target: scaffold0104 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 2122 - 2325
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||| |||||||| |||  || ||||||||||||    
T  2122 tcagttatggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaat 2221  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgct 234  Q
    |||||| ||| | ||||| ||||||||| ||  |||||  || |||| |||  |||||||||||| ||||||||||| || ||||||| ||| ||||| |    
T  2222 ctcgttttaaatcatcatctaatctttattaaacatcttaaggcacttaaaagcatctaaggttcaactcaaaagtc-aacatacagaattcaacatgtt 2320  T
Q  235 ctctg 239  Q
    |||||    
T  2321 ctctg 2325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 35 - 239
Target Start/End: Original strand, 9804 - 10007
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaat 134  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||| | |||||| |||||||| |||  || ||||||||||||    
T  9804 tcagttatggaagtgctcgcgaggcgagagcatctactcgccatggcgagtacaagtcagatttccaactcaagttgttctaagataaaccaggttcaat 9903  T
Q  135 ctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgct 234  Q
    |||||| ||| | ||||| ||||||||| ||  |||||  || |||| |||  |||||||||||| ||||||||||| || ||||||| ||| ||||| |    
T  9904 ctcgttttaaatcatcatctaatctttattaaacatcttaaggcacttaaaagcatctaaggttcaactcaaaagtc-aacatacagaattcaacatgtt 10002  T
Q  235 ctctg 239  Q
    |||||    
T  10003 ctctg 10007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 83; Significance: 2e-39; HSPs: 4)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 18461 - 18262
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||| ||||||          | ||||    
T  18461 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaaataaggttgtt----------ctaggt 18372  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||  | ||||||||||||  || ||  || |||||||| ||||||||||||| ||||||||||||||||  |||| ||  ||    
T  18371 tcaatcttgttctaaatcattctctaatctttaatagacacctaaaggcactcaaaaacatctaaggttcaactcaaaagtcaaaaactcagaatttgac 18272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 4822 - 4874
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    ||||||| |||||||| ||||||||||||||||||| || | |||| ||||||    
T  4822 ctcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 4874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 12404 - 12456
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    ||||||| |||||||| ||||||||||||||||||| || | |||| ||||||    
T  12404 ctcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 12456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 22356 - 22408
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    ||||||| |||||||| ||||||||||||||||||| || | |||| ||||||    
T  22356 ctcgcgaagcgagagcctctgctcgccatggcgagttcaggtcagattcccaa 22408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 83; Significance: 2e-39; HSPs: 3)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 19465 - 19664
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  19465 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 19554  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||  | ||||||||| ||  || ||  ||  ||||||||  ||||||||||| ||||||||||||||||  |||| ||| ||    
T  19555 tcaatcttgttctaaatcattctctaatctttagtagacacctaaaggtactcaaaggtatctaaggttcaactcaaaagtcaaaaactcagaattcgac 19654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 13181 - 13264
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13181 tgcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 13264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 62541 - 62600
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  62541 ctcaattctggaagtactcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 62600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 30 - 239
Target Start/End: Complemental strand, 66244 - 66045
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  66244 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 66155  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||| | ||| | |||||| || ||  || ||  ||  |||||||| |||||||||||| ||||||||||||||||   ||| ||| ||    
T  66154 tcaatcttgttctaaatcatcctctaatctatattagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaacttagaattcgac 66055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 72 - 239
Target Start/End: Complemental strand, 71343 - 71186
Alignment:
Q  72 tcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatc 171  Q
    |||||||||||||||||||||||| |||||||||| ||||||          ||||||||||||| ||||||| | ||| | |||||| || ||  || |    
T  71343 tcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggttcaatcttgttctaaatcatcctctaatctatattagacacc 71254  T
Q  172 tccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |  ||  |||||||| |||||||||||| ||||||||||||||||   ||| ||| ||||||||||||    
T  71253 taaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaacttagaattcgacatgctctctg 71186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 178974 - 179128
Alignment:
Q  61 agagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctt 160  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |  |||||| |||  || ||||||||||||||  ||||||||||||||||||||||    
T  178974 agagcatctgctagccatggcgagtacaagccagattcccaacaatggttgttctaagttaaaccaggttcaatcttattctaagttatcatttaatctt 179073  T
Q  161 taatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||| |||||| ||| |||| ||| ||||||||||| | |||||||||||||||    
T  179074 taataagcatcttcaggcactgaaaaacatctaaggtccaactcaaaagtcaaaa 179128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1326 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold1326
Description:

Target: scaffold1326; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 239
Target Start/End: Complemental strand, 1324 - 1119
Alignment:
Q  24 ctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactata 123  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| |  ||          |||     
T  1324 ctcacttgcacttagttctggaagtgctcgcgaggcgagagcatctgctcgctatggcgagtacaagccagaattccaacaatggt----------tatt 1235  T
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagat 223  Q
    ||| ||||||||| ||||||||| | ||| ||||||||||||  |||||  || ||||||||  ||||||| |||| ||||| ||||||||| ||||||     
T  1234 ccaagttcaatcttgttctaagtcaacatctaatctttaataaacatctaaaggcactcaaaagcatctaaagttcaactcacaagtcaaaactacagaa 1135  T
Q  224 ttctacatgctctctg 239  Q
    ||| ||||||||||||    
T  1134 ttcgacatgctctctg 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 10181 - 10356
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||          |||||||    
T  10181 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt----------ccaggtt 10270  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||    |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  10271 caatctcgttctaaatcattccctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 10356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 173567 - 173766
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  173567 tgcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 173656  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    |||||||| || ||| | ||| | ||||| ||| ||  || ||  ||  ||||||||||||||||||||| ||| ||||||||||||  |||| ||| ||    
T  173657 tcaatctcattataaatcatcctctaatcattagtagacacctaaaggtactcaaagacatctaaggttcaactaaaaagtcaaaaactcagaattcgac 173756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 422359 - 422285
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||| | |||||||    
T  422359 gcactctgttctggaagtgctcgcgagctgagagcatctgctcgccatggcgagtacttgccagatttccaacta 422285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 239
Target Start/End: Complemental strand, 35338 - 35140
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  | |||||||| ||||||          |||||||    
T  35338 gcactcagttctggaagtgctcgcgaggcgagagcatctcctcgccatggcgagtacaagccaggtttccaactaaggttgtt----------ccaggtt 35249  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    |||||| ||||||| | ||| | ||||||||| ||| |||||  ||  |||||||  |||||||||||| ||||||||||||||| |||| | ||| |||    
T  35248 caatcttgttctaaatcatcctctaatctttattatacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcgaca 35149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 78; Significance: 2e-36; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 31 - 239
Target Start/End: Complemental strand, 19845 - 19647
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||||          |||||||    
T  19845 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcaagtacaagccagattcccaactaaggttgtt----------ccaggtt 19756  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctaca 230  Q
    |||||| ||||||| | ||  | ||||||||| ||  || ||  |   |||||||| |||||||||||| ||||||||||||||||  |||| ||| |||    
T  19755 caatcttgttctaaatcattctctaatctttagtagacacctaaatgtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcagaattcgaca 19656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 32642 - 32601
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  32642 cagacactcaaaagcatctaaggttcgactcaaaagtcaaaa 32601  T

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Target: scaffold0120; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 46363 - 46404
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||||||  |||||||||||| |||||||||||||||    
T  46363 cagacactcaaaagcatctaaggttcgactcaaaagtcaaaa 46404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 228202 - 228119
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  228202 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 228119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 76; Significance: 3e-35; HSPs: 5)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 30 - 113
Target Start/End: Original strand, 96883 - 96966
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  96883 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 96966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 215
Target Start/End: Original strand, 71590 - 71765
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||          ||||||    
T  71590 tgcactcaattctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagattcccaactaaggttgtt----------ccaggt 71679  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| ||||||| | ||| | |||| | || ||  || ||  ||  ||||||||||||||||||||| |||||||||||||||    
T  71680 tcaatcttgttctaattaatcctctaatatctagtagacacctaaaggtactcaaagacatctaaggttcaactcaaaagtcaaaa 71765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 216
Target Start/End: Original strand, 139988 - 140163
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||||| ||          ||||    
T  139988 gcactcagttctggaagtgctcgcgaggcgagagcatatgctcgccatggcgagtacaagccagaattccaactaaggttgttcta----------ggtt 140077  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||||||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||    
T  140078 caatctcgttctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaa 140163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 413874 - 413803
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| | ||||||||    
T  413874 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacttgccagatttccaactaa 413803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 339757 - 339705
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| |||||||||| |||||||| || | |||| ||||||    
T  339757 ctcgcgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaa 339705  T

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Target: scaffold1461 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold1461
Description:

Target: scaffold1461; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 207 - 289
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  207 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1461; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 345 - 382
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  345 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 215
Target Start/End: Complemental strand, 19120 - 18945
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |  ||          ||| ||||||    
T  19120 tgcactcagttctggaagtgctcgcgaggcgagagcatcttctcgccatggcgagtacaagccagaattccaacaatggt----------tattccaggt 19031  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| ||||||||| ||||| ||||||||| |   |||||  || ||||||||  |||||||||||| |||||||||||||||    
T  19030 tcaatcttgttctaagtcatcatctaatctttagtgaacatctaaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaa 18945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 30 - 215
Target Start/End: Complemental strand, 15247 - 15072
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||          ||||||    
T  15247 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgtt----------ccaggt 15158  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||| ||||||| | ||| | ||||||||| ||  || ||  ||  |||||||| |||||||||||| |||||||||| ||||    
T  15157 tcaatcttgttctaattcatcctctaatctttagtagacacctaaaggtactcaaaggcatctaaggttcaactcaaaagtgaaaa 15072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 113
Target Start/End: Original strand, 9701 - 9780
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  9701 ctcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtacaagccagaatcccaactaaggttgtt 9780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 9836 - 9873
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  9836 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 9873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 80 - 239
Target Start/End: Original strand, 44391 - 44550
Alignment:
Q  80 gcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagaca 179  Q
    |||||||||||||||||| ||| || |||||||| ||| ||| |||||||||||||||||||||| | ||||| ||||||||||||   ||||  || ||    
T  44391 gcgagtacaagccagaattccagcttaagttgttctaagctaaaccaggttcaatctcgttctaaatcatcatctaatctttaataaatatcttaaggca 44490  T
Q  180 ctcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||  |||||||||||| ||||||||||||||| |||| | ||| ||||||||||||    
T  44491 ctcaaaagcatctaaggttcaactcaaaagtcaaaattacaaaattcaacatgctctctg 44550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 72; Significance: 7e-33; HSPs: 3)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 30 - 113
Target Start/End: Complemental strand, 2502 - 2419
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  2502 tgcactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 2419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 9627 - 9680
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  9627 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaggcca 9680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 2353 - 2304
Alignment:
Q  189 atctaaggttctactcaaaagtcaaaaatacagatttctacatgctctct 238  Q
    ||||||||||| ||||||||||||||||  |||| ||| |||||||||||    
T  2353 atctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctct 2304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 608 - 807
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||| |||          |||||    
T  608 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattt----------caggt 697  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| ||||||||||| ||| |||  | ||| ||    
T  698 tcaatcttgttctaagtcatcctctaatctttagtgaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaattacgaaattcaac 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 71; Significance: 3e-32; HSPs: 6)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 30 - 239
Target Start/End: Original strand, 45395 - 45594
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggt 129  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |  ||| |||          |||||    
T  45395 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacaatggttattt----------caggt 45484  T
Q  130 tcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctac 229  Q
    ||||||| ||||||||| ||| | ||||||||| |   |||||  ||  |||||||  |||||||||||| ||||||||||| ||| |||  | ||| ||    
T  45485 tcaatcttgttctaagtcatcctctaatctttagtgaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaattacgaaattcaac 45584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 105
Target Start/End: Original strand, 7222 - 7296
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| ||| |||||||    
T  7222 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccaaagcgagtacaagccaaaattccaacta 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 11129 - 11068
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11129 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcca 11068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 38646 - 38564
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    |||||| |||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||   | |||||||| |||||||    
T  38646 cactcaattcttgaagtgctcacgaggcgagaggatctgctcgccatggcgagtacaagccaactttccaactaaggttgttt 38564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 10992 - 10955
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  10992 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 10955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 38509 - 38472
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  38509 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 38472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 24796 - 24714
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  24796 gcactcagttctggaagtgctcgcgaggcgagagcgtctgctcgccatggcgagtacaagccagattcccaactaaggttgtt 24714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 13316 - 13240
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  13316 tgcactcagttctggaagtgctcgcgaggagagagcatctgctcgccatggcgagtacaagccagattcccaactaa 13240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 106
Target Start/End: Complemental strand, 3359 - 3283
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  3359 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatttccaactaa 3283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 11658 - 11740
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  11658 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagatccccaactaaggttgtt 11740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 36583 - 36665
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||    
T  36583 gcactcagttctagaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaattccaacttaggttgtt 36665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 36721 - 36757
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||||| |||||||||||| |||||||||||||||    
T  36721 actcaaaggcatctaaggttcaactcaaaagtcaaaa 36757  T

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Target: scaffold0130 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Complemental strand, 5828 - 5746
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||||||    
T  5828 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccggaattccaactaaggttgtt 5746  T

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Target: scaffold0010 (Bit Score: 67; Significance: 7e-30; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 23494 - 23576
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  23494 gcactcagttatggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagattctcaactaaggttgtt 23576  T

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Target: scaffold0010; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 113
Target Start/End: Original strand, 242344 - 242417
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||   |||||||||| ||||||    
T  242344 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagccaacttcccaactaatgttgtt 242417  T

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Target: scaffold0010; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 130221 - 130257
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  130221 gctcgcgaggcgagagcctctgctcgccatggcgagt 130257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 23632 - 23669
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  23632 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 23669  T

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Target: scaffold1220 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold1220
Description:

Target: scaffold1220; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 2079 - 2144
Alignment:
Q  30 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2079 tgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaga 2144  T

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Target: scaffold1220; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 2165 - 2277
Alignment:
Q  127 ggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttc 226  Q
    |||||||||| ||||||||| ||| | |||||||||||   |||||  ||  |||||||  |||||||||||| ||||||||||| ||| |||  | |||    
T  2165 ggttcaatcttgttctaagtcatcctctaatctttaatgaacatctaaaggtactcaaaagcatctaaggttcaactcaaaagtccaaattacgaaattc 2264  T
Q  227 tacatgctctctg 239  Q
     ||||||||||||    
T  2265 aacatgctctctg 2277  T

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Target: scaffold0585 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 9613 - 9694
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  9613 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagccagattcccaactaaggttgtt 9694  T

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Target: scaffold0064 (Bit Score: 65; Significance: 1e-28; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 123 - 239
Target Start/End: Complemental strand, 64398 - 64282
Alignment:
Q  123 accaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacaga 222  Q
    ||||||||||||||| ||||| |||||||||||||||||||||  |||||  || ||||||||  |||||||||||| |||||||||||||||||||| |    
T  64398 accaggttcaatctcattctatgttatcatttaatctttaataaacatcttaaggcactcaaaagcatctaaggttcaactcaaaagtcaaaaatacata 64299  T
Q  223 tttctacatgctctctg 239  Q
     ||| ||||||||||||    
T  64298 attcaacatgctctctg 64282  T

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Target: scaffold0064; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 174 - 219
Target Start/End: Original strand, 47413 - 47458
Alignment:
Q  174 cagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||||||  |||||||||||| ||||||||||||| |||||    
T  47413 cagacactcaaaagcatctaaggttcaactcaaaagtcaacaatac 47458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1552 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1552
Description:

Target: scaffold1552; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 635 - 713
Alignment:
Q  35 tcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| || ||||||    
T  635 tcagttctggaagtgctcgcgaggcgagagcatcagctcgccatggcgagtacaagccagaattccaacaaaggttgtt 713  T

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Target: scaffold0439 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 220
Target Start/End: Complemental strand, 2263 - 2084
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||  ||||||          |||||||    
T  2263 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccaggtttccaactacggttgtt----------ccaggtt 2174  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    |||||| || |||||| ||| | ||||||||||||  || ||  ||  |||||||  |||||||||||| || |||||||||||| ||||    
T  2173 caatcttgtactaagtcatcctctaatctttaatacacaactaaaggtactcaaaagcatctaaggttcaacgcaaaagtcaaaattaca 2084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 31 - 93
Target Start/End: Complemental strand, 10123 - 10061
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10123 gcactcggttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 10061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 10040 - 9944
Alignment:
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaataca 220  Q
    ||||||||||||| || |||||| ||| | ||||||||||||  || ||  ||  |||||||  |||||||||||| || |||||||||||| ||||    
T  10040 ccaggttcaatcttgtactaagtcatcctctaatctttaatacacaactaaaggtactcaaaagcatctaaggttcaacgcaaaagtcaaaattaca 9944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 4052 - 3874
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||  ||||||          |||||||    
T  4052 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaggccaggtttccaactacggttgtt----------ccaggtt 3963  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||| | ||| | ||||||||| ||  |||||  ||  |||||||  ||||||| |||| ||||||||||| |||||||    
T  3962 caatcttgttctaaatcatcctctaatctttagtagacatctaaaggtactcaaaagcatctaaagttcaactcaaaagtccaaaatac 3874  T

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Target: scaffold0555 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 6 - 102
Target Start/End: Original strand, 849 - 945
Alignment:
Q  6 gacacagatcgcattttcctcacttgcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    ||||||||||||| | |||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || | |||||||||||    
T  849 gacacagatcgcaatatcctcatttacactcagttctggaagtgctcacgaggcgagaacatctgctcgccatggcgagttcagggcagaatcccaa 945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 1021 - 1062
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  1021 cactcaaagacatctaaggttcaactcaaaagtcaaaaatac 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 32 - 239
Target Start/End: Original strand, 18633 - 18830
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggttc 131  Q
    |||||| |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| |||||||||| ||||||          ||||||||    
T  18633 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccttagcgagttcaagccagattcccaactaaggttgtt----------ccaggttc 18722  T
Q  132 aatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacat 231  Q
    |||||| |||||| | ||  | |||||  || || ||| ||  ||  |||||||| |||||||||||| ||||||||||||||||  || | ||| ||||    
T  18723 aatctcattctaaatcattctctaatcaatagtaggcacctaaaggtactcaaaggcatctaaggttcaactcaaaagtcaaaaactcataattcgacat 18822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 113
Target Start/End: Original strand, 8849 - 8931
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||| | |||||||| ||||||    
T  8849 gcactcagttctggaaatgctcgcgaggcgagagcatctcctcgccatggcgagtacttgccagatttccaactaaggttgtt 8931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 6085 - 6011
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaacta 105  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| ||| |||||||    
T  6085 gcactcagttctggaagtgctcgcgaggcgagagcatcagctcgccaaagcgagtacaagccaaaattccaacta 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Original strand, 2178 - 2239
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2178 cactcaattttggaagtgctcgcgaggcgagagcatctgctcgccatggtgagtacaagcca 2239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 2315 - 2352
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  2315 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 2352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 4928 - 4867
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4928 cactcaattctggaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 4867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 31 - 219
Target Start/End: Complemental strand, 192144 - 191966
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttttaaactataccaggtt 130  Q
    ||||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||| ||||     ||||||          |||||||    
T  192144 gcactcaattctggaagtgctcacgaggcgagagcatcagctcgccacggcgagtacaagccagaattccaatactggttgtt----------ccaggtt 192055  T
Q  131 caatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    |||||| ||||||||| ||  | ||||||||||||  |||||  ||  |||| || ||||||||||||| ||||||||||| |||||||    
T  192054 caatcttgttctaagtcattctctaatctttaatacacatctaaaggtactcgaaaacatctaaggttcaactcaaaagtccaaaatac 191966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 114
Target Start/End: Original strand, 15618 - 15698
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgttt 114  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||   | |||||||| |||||||    
T  15618 ctcaattctggaagtgctcgcgaggcgagagcatctgctcgccattgcgagtacaagccaactttccaactaaggttgttt 15698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 15759 - 15796
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  15759 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 15796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 7098 - 7042
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7098 gcactcagttctggaagtgctcgcgaggcaagagcatctgctcgccatggcgagtac 7042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 215
Target Start/End: Complemental strand, 36105 - 36034
Alignment:
Q  144 agttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    |||||||||||||||||||||| |||||| ||| |||||||| ||||||||||||| |||||||||||||||    
T  36105 agttatcatttaatctttaataagcatcttcaggcactcaaaaacatctaaggttcaactcaaaagtcaaaa 36034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 113
Target Start/End: Complemental strand, 18180 - 18106
Alignment:
Q  39 ttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaactaaagttgtt 113  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||| ||| |||||| ||||||    
T  18180 ttctggaagtgctcgcgaggtgagagcatcagctcgccatagcgagtacaagccagattcctaactaaggttgtt 18106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 18050 - 18013
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  18050 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 18013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 58545 - 58484
Alignment:
Q  32 cactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  58545 cactcaattctagaagtgctcgcgaggcgagagcatctgctcgccgtggcgagtacaagcca 58484  T

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Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 132963 - 133003
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  132963 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 133003  T

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Target: scaffold0034 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 93
Target Start/End: Complemental strand, 16488 - 16429
Alignment:
Q  34 ctcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    |||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||    
T  16488 ctcaattctggaagtgcttgcgaggcgagtgcatctgctcgccatggcgagtacaagcca 16429  T

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Target: scaffold0484 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 1345 - 1406
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  1345 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 1406  T

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Target: scaffold0165 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 3912 - 3973
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  3912 cactcaaagtcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 3973  T

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Target: scaffold0165; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 178 - 239
Target Start/End: Original strand, 7976 - 8037
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||||    
T  7976 cactcaaagtcatctaaggttcaactcaaaagtcaaaaatacagaattcaacatgctctctg 8037  T

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Target: scaffold0165; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 3795 - 3846
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||| ||||||| ||||||||||||||||||| || | ||||||||||    
T  3795 ctcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatccca 3846  T

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Target: scaffold0165; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 7859 - 7910
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||| ||||||| ||||||||||||||||||| || | ||||||||||    
T  7859 ctcgcgagacgagagcctctgctcgccatggcgagttcaggtcagaatccca 7910  T

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Target: scaffold0138 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 30026 - 29973
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  30026 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagtacaagcca 29973  T

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Target: scaffold0259 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Original strand, 10464 - 10517
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  10464 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcca 10517  T

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Target: scaffold0233 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 14359 - 14306
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||| |||||||    
T  14359 tctggaagtgctcgcgaggcgagagtatctactcgccatggcgagttcaagcca 14306  T

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Target: scaffold0192 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 10221 - 10261
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10221 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 10261  T

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Target: scaffold0192; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Original strand, 10352 - 10389
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  10352 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 10389  T

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Target: scaffold0124 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 24461 - 24421
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  24461 aagtgctcgcgaggcgagagcctctgctcgccatggcgagt 24421  T

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Target: scaffold1048 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1048
Description:

Target: scaffold1048; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 219
Target Start/End: Original strand, 1798 - 1893
Alignment:
Q  124 ccaggttcaatctcgttctaagttatcatttaatctttaatatgcatctccagacactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||||||| ||||||| |  || | ||||||||||||  |||||  ||  ||||||| ||||||||||||| ||||||||||| |||||||    
T  1798 ccaggttcaatcttgttctaaatcctcctctaatctttaataaacatctaaaggtactcaaaaacatctaaggttcaactcaaaagtccaaaatac 1893  T

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Target: scaffold0347 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Original strand, 340 - 379
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  340 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 379  T

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Target: scaffold0075 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 8103 - 8064
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  8103 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 8064  T

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Target: scaffold0075; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 215
Target Start/End: Complemental strand, 7973 - 7936
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaa 215  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  7973 cactcaaaggcatctaaggttcaactcaaaagtcaaaa 7936  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 207328 - 207289
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  207328 agtgctcgcgaggcgagagcctctgctcgccatggcgagt 207289  T

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Target: scaffold0016; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 207198 - 207160
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  207198 cactcaaaggcatctaaggttcaactcaaaagtcaaaaa 207160  T

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Target: scaffold0718 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 4821 - 4780
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  4821 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatac 4780  T

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Target: scaffold0490 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 2383 - 2424
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||| |||||||||||| |||||||||||||||||||    
T  2383 cactcaaaggcatctaaggttcaactcaaaagtcaaaaatac 2424  T

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Target: scaffold0405 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 9382 - 9322
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||| |||||||||||| ||||||||||||||||  || | ||| ||||||||||||    
T  9382 actcaaaggcatctaaggttcaactcaaaagtcaaaaactcaaaattcgacatgctctctg 9322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 253 - 301
Alignment:
Q  53 gcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    ||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  253 gcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 5029 - 5077
Alignment:
Q  53 gcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    ||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  5029 gcgaggcgagagcctctgctcgccatggcgagttcaggtcagaatccca 5077  T

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Target: scaffold0309 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 7041 - 7081
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaata 218  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  7041 cactcaaaggcatctaaggttcaactcaaaagtcaaaaata 7081  T

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Target: scaffold0305 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 101
Target Start/End: Original strand, 20716 - 20768
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    ||||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  20716 gctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 20768  T

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Target: scaffold0211 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 28620 - 28580
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  28620 aagtactcgcgaggcgagagcctctgctcgccatggcgagt 28580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 2251 - 2215
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2251 gctcgcgaggcgagagcctctgctcgccatggcgagt 2215  T

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Target: scaffold0142 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 7581 - 7541
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||||||| |||||| ||||||||||||    
T  7581 aagtgctcgcgaggcgagagcctctgcttgccatggcgagt 7541  T

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Target: scaffold0142; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 17095 - 17130
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||| |||||||||||||||||||    
T  17095 ctcgcgaggcgagagcctctgctcgccatggcgagt 17130  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 59309 - 59273
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||||||||||||    
T  59309 gctcgcgaggcgagagcctctgctcgccatggcgagt 59273  T

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Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 88
Target Start/End: Original strand, 40173 - 40209
Alignment:
Q  52 cgcgaggcgagagcatctgctcgccatggcgagtaca 88  Q
    |||||||||||||| |||||||||| |||||||||||    
T  40173 cgcgaggcgagagcctctgctcgccgtggcgagtaca 40209  T

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Target: scaffold1984 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 445 - 480
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||| |||||||||||||||||||    
T  445 ctcgcgaggcgagagcctctgctcgccatggcgagt 480  T

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Target: scaffold1842 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 856 - 805
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  856 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 805  T

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Target: scaffold0451 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 11481 - 11430
Alignment:
Q  188 catctaaggttctactcaaaagtcaaaaatacagatttctacatgctctctg 239  Q
    |||||||||||| ||||||||||||||||  |||| ||| ||||||||||||    
T  11481 catctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctctctg 11430  T

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Target: scaffold0292 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 3784 - 3835
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  3784 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 3835  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 12618 - 12579
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||| ||||||||||||| |||||||||||||||||||    
T  12618 agtgcttgcgaggcgagagcctctgctcgccatggcgagt 12579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 16406 - 16371
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||| |||||||||||||||||||    
T  16406 ctcgcgaggcgagagcctctgctcgccatggcgagt 16371  T

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Target: scaffold0175 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 13406 - 13457
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  13406 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 13457  T

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Target: scaffold0175; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 85
Target Start/End: Original strand, 34437 - 34471
Alignment:
Q  51 tcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||| |||||||||||||||||||    
T  34437 tcgcgaggcgagagcctctgctcgccatggcgagt 34471  T

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Target: scaffold0175; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 34562 - 34603
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  34562 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 34603  T

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Target: scaffold0166 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 85
Target Start/End: Complemental strand, 9643 - 9604
Alignment:
Q  46 agtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||||||||||||||||||| ||||||||||||| |||||    
T  9643 agtgctcgcgaggcgagagcctctgctcgccatgacgagt 9604  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 32378 - 32429
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||| ||| |||| ||||||||||    
T  32378 ctcgcgaggcgagagcctctgctcgccgtggcaagttcaagtcagaatccca 32429  T

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Target: scaffold0113; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 32495 - 32536
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  32495 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 32536  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Original strand, 52226 - 52277
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  52226 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 52277  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 101
Target Start/End: Complemental strand, 167786 - 167735
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatccca 101  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||||    
T  167786 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccca 167735  T

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Target: scaffold0051 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 90
Target Start/End: Original strand, 36994 - 37044
Alignment:
Q  40 tctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaag 90  Q
    |||||||||||||||||||||||||   || ||||||| ||||||||||||    
T  36994 tctggaagtgctcgcgaggcgagagttcctactcgccaaggcgagtacaag 37044  T

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Target: scaffold0839 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 83
Target Start/End: Complemental strand, 1883 - 1850
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcga 83  Q
    |||||||||||||||| |||||||||||||||||    
T  1883 ctcgcgaggcgagagcctctgctcgccatggcga 1850  T

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Target: scaffold0772 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 236
Target Start/End: Original strand, 6432 - 6489
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatacagatttctacatgctct 236  Q
    |||||||| | |||||||||| ||||||||||||||||  |||| ||| |||||||||    
T  6432 actcaaaggcgtctaaggttcaactcaaaagtcaaaaactcagaattcgacatgctct 6489  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 742 - 701
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  742 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 701  T

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Target: scaffold0427 (Bit Score: 30; Significance: 0.00000009; HSPs: 2)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 13926 - 13967
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  13926 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 13967  T

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Target: scaffold0427; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 13808 - 13844
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  13808 gctcgcgaggcgagagcctctgctcgccgtggcgagt 13844  T

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Target: scaffold0423 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 10951 - 10910
Alignment:
Q  178 cactcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||||  |||||||||||| |||||||||||||||||||    
T  10951 cactcaaaagcatctaaggttcaactcaaaagtcaaaaatac 10910  T

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Target: scaffold0285 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 12169 - 12206
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaa 216  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  12169 actcaaaggcatctaaggttcaactcaaaagtcaaaaa 12206  T

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Target: scaffold0256 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 24790 - 24741
Alignment:
Q  44 gaagtgctcgcgaggcgagagcatctgctcgccatggcgagtacaagcca 93  Q
    ||||||| ||||||||||||| | || ||| |||||||||||||||||||    
T  24790 gaagtgcccgcgaggcgagagtacctactcaccatggcgagtacaagcca 24741  T

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Target: scaffold0145 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 39075 - 39124
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcc 99  Q
    |||||||||||||||| |||||||||| |||||||| || | ||||||||    
T  39075 ctcgcgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 39124  T

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Target: scaffold1137 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 219
Target Start/End: Complemental strand, 1979 - 1939
Alignment:
Q  179 actcaaagacatctaaggttctactcaaaagtcaaaaatac 219  Q
    ||||||| |||||||||| || |||||||||||||||||||    
T  1979 actcaaaaacatctaaggatcaactcaaaagtcaaaaatac 1939  T

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Target: scaffold1137; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 2112 - 2072
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| |||||| ||||||||||||    
T  2112 aagtactcgcgaggcgagagcctctgcttgccatggcgagt 2072  T

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Target: scaffold0628 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 2613 - 2573
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| |||||||||||||||| ||| |||||||||||||||    
T  2613 aagtactcgcgaggcgagagcctctactcgccatggcgagt 2573  T

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Target: scaffold0525 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 3704 - 3648
Alignment:
Q  31 gcactcagttctggaagtgctcgcgaggcgagagcatctgctcgccatggcgagtac 87  Q
    ||||||| ||||||| ||||||||||||||||||    | |||||||||||||||||    
T  3704 gcactcaattctggatgtgctcgcgaggcgagagttcttactcgccatggcgagtac 3648  T

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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Original strand, 9390 - 9426
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  9390 gctcgcgaggcgagagcctctactcgccatggcgagt 9426  T

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Target: scaffold0413 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 15421 - 15369
Alignment:
Q  50 ctcgcgaggcgagagcatctgctcgccatggcgagtacaagccagaatcccaa 102  Q
    |||||||||||||||| ||||||||| ||||||||| || | |||| ||||||    
T  15421 ctcgcgaggcgagagcctctgctcgctatggcgagttcaggtcagattcccaa 15369  T

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Target: scaffold0150 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 85
Target Start/End: Original strand, 32393 - 32433
Alignment:
Q  45 aagtgctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    |||| ||||||||| |||||| |||||||||||||||||||    
T  32393 aagtactcgcgaggtgagagcctctgctcgccatggcgagt 32433  T

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Target: scaffold0125 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 45597 - 45561
Alignment:
Q  49 gctcgcgaggcgagagcatctgctcgccatggcgagt 85  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  45597 gctcgcgaggcgagagcctctactcgccatggcgagt 45561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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