View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4242_high_10 (Length: 232)
Name: NF4242_high_10
Description: NF4242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4242_high_10 |
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Alignment Details
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 39809605 - 39809454
Alignment:
| Q |
1 |
cccatcttctgtatgctaacctttgaagttcctctccttccacctacaaagtatgcctcattagtactctactagtttcaccaaacaaatcaagtgtttg |
100 |
Q |
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| T |
39809605 |
cccatcttctgtatgctaacctttgaagttcctctccttccacctacaaagtatgcctcattagtactctactagtttcaccaaacaaatcaagtgtttg |
39809506 |
T |
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| Q |
101 |
agctgaaacactcaaaaaatgtagaagactaattaagagttcaaactttggt |
152 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39809505 |
agctgaaacactcaaaaaatgtagaagactaattaagagttcaaactttggt |
39809454 |
T |
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