View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4242_low_1 (Length: 513)

Name: NF4242_low_1
Description: NF4242
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4242_low_1
NF4242_low_1
[»] chr2 (72 HSPs)
chr2 (100-497)||(6173890-6174320)
chr2 (15-90)||(6175042-6175117)
chr2 (295-385)||(83971-84061)
chr2 (280-385)||(9986116-9986222)
chr2 (295-385)||(20046872-20046962)
chr2 (280-385)||(27248925-27249031)
chr2 (280-385)||(36234199-36234305)
chr2 (281-385)||(4228324-4228429)
chr2 (281-385)||(21570183-21570288)
chr2 (295-385)||(30420870-30420960)
chr2 (280-385)||(7015485-7015591)
chr2 (295-385)||(8806067-8806157)
chr2 (280-385)||(8971402-8971508)
chr2 (280-385)||(22421929-22422035)
chr2 (280-385)||(31580429-31580535)
chr2 (280-375)||(4193048-4193144)
chr2 (295-374)||(33228778-33228857)
chr2 (283-385)||(40625834-40625937)
chr2 (295-385)||(7558653-7558743)
chr2 (295-385)||(21132033-21132123)
chr2 (280-385)||(25087237-25087342)
chr2 (280-385)||(34600415-34600521)
chr2 (295-385)||(41431229-41431319)
chr2 (280-360)||(3725406-3725487)
chr2 (283-383)||(38575263-38575363)
chr2 (283-385)||(27949627-27949730)
chr2 (319-385)||(40659746-40659812)
chr2 (280-385)||(2808247-2808352)
chr2 (295-385)||(3268625-3268715)
chr2 (295-352)||(45128426-45128483)
chr2 (322-373)||(17319533-17319584)
chr2 (295-362)||(9374353-9374420)
chr2 (330-385)||(31788655-31788710)
chr2 (280-377)||(4778960-4779061)
chr2 (295-372)||(12236848-12236925)
chr2 (396-489)||(18681386-18681478)
chr2 (281-385)||(30923250-30923355)
chr2 (400-460)||(29043993-29044053)
chr2 (330-374)||(29173563-29173607)
chr2 (338-385)||(17151623-17151670)
chr2 (295-374)||(24461653-24461731)
chr2 (338-377)||(38445373-38445412)
chr2 (295-374)||(41712579-41712658)
chr2 (295-374)||(4100545-4100622)
chr2 (335-377)||(17248998-17249040)
chr2 (315-385)||(27477349-27477419)
chr2 (320-386)||(32197567-32197633)
chr2 (299-385)||(36324055-36324141)
chr2 (428-477)||(4472282-4472331)
chr2 (320-385)||(39641121-39641186)
chr2 (425-477)||(25504581-25504633)
chr2 (295-371)||(37613916-37613992)
chr2 (330-377)||(5427715-5427762)
chr2 (335-374)||(18763678-18763717)
chr2 (330-377)||(36942968-36943015)
chr2 (335-377)||(35220535-35220577)
chr2 (340-377)||(281005-281042)
chr2 (295-372)||(459066-459142)
chr2 (336-385)||(4903997-4904046)
chr2 (432-477)||(22884807-22884852)
chr2 (394-499)||(31902083-31902187)
chr2 (333-374)||(32678939-32678980)
chr2 (338-374)||(4041448-4041484)
chr2 (429-477)||(4975085-4975133)
chr2 (429-477)||(4992993-4993041)
chr2 (429-477)||(7696301-7696349)
chr2 (337-385)||(8809478-8809526)
chr2 (301-373)||(23903554-23903626)
chr2 (280-343)||(26025270-26025334)
chr2 (337-385)||(31128638-31128686)
chr2 (337-385)||(32913441-32913489)
chr2 (338-374)||(33585589-33585625)
[»] chr6 (50 HSPs)
chr6 (280-385)||(8497165-8497271)
chr6 (280-385)||(12653141-12653247)
chr6 (295-385)||(25064433-25064523)
chr6 (283-385)||(7875821-7875924)
chr6 (283-385)||(7880879-7880982)
chr6 (295-385)||(16419355-16419445)
chr6 (295-385)||(17237076-17237166)
chr6 (295-385)||(17334950-17335040)
chr6 (280-385)||(23947091-23947197)
chr6 (281-385)||(4088657-4088762)
chr6 (295-370)||(4984357-4984432)
chr6 (295-385)||(8196197-8196287)
chr6 (295-385)||(12059563-12059653)
chr6 (283-374)||(33740355-33740447)
chr6 (295-374)||(8027908-8027987)
chr6 (280-375)||(3173986-3174082)
chr6 (282-373)||(4468761-4468853)
chr6 (295-385)||(28634903-28634993)
chr6 (295-385)||(35001787-35001877)
chr6 (308-370)||(16892619-16892681)
chr6 (400-481)||(27774906-27774986)
chr6 (295-374)||(12168888-12168965)
chr6 (394-478)||(12794422-12794506)
chr6 (394-480)||(6946859-6946946)
chr6 (297-385)||(10228876-10228967)
chr6 (395-482)||(9224240-9224326)
chr6 (299-385)||(33110808-33110894)
chr6 (280-352)||(7028085-7028158)
chr6 (283-355)||(34489428-34489501)
chr6 (400-499)||(26215693-26215792)
chr6 (335-377)||(546229-546271)
chr6 (280-377)||(606402-606503)
chr6 (394-480)||(26534421-26534506)
chr6 (336-377)||(67852-67893)
chr6 (336-385)||(33053019-33053068)
chr6 (309-385)||(8518921-8518997)
chr6 (327-374)||(6957342-6957389)
chr6 (330-377)||(23128816-23128863)
chr6 (335-374)||(30776864-30776903)
chr6 (330-385)||(30894789-30894843)
chr6 (330-377)||(32327065-32327112)
chr6 (338-372)||(1933545-1933579)
chr6 (336-374)||(9341502-9341540)
chr6 (283-356)||(15612366-15612440)
chr6 (295-341)||(20619662-20619708)
chr6 (336-385)||(14174922-14174971)
chr6 (336-385)||(14179458-14179507)
chr6 (330-374)||(3913419-3913463)
chr6 (335-375)||(7515052-7515092)
chr6 (330-374)||(30493733-30493777)
[»] chr4 (69 HSPs)
chr4 (280-385)||(9528651-9528757)
chr4 (281-385)||(53616425-53616530)
chr4 (280-374)||(20569477-20569572)
chr4 (280-374)||(25274103-25274198)
chr4 (280-385)||(2115362-2115468)
chr4 (280-385)||(38706484-38706590)
chr4 (281-385)||(9645299-9645404)
chr4 (308-385)||(47417871-47417948)
chr4 (298-385)||(44947621-44947708)
chr4 (295-385)||(34024228-34024318)
chr4 (295-385)||(45227831-45227921)
chr4 (295-385)||(50766302-50766392)
chr4 (295-385)||(56199305-56199395)
chr4 (280-374)||(9284131-9284226)
chr4 (295-382)||(43444604-43444691)
chr4 (295-385)||(4644067-4644157)
chr4 (295-385)||(51318194-51318284)
chr4 (295-385)||(1532117-1532207)
chr4 (280-385)||(10359323-10359428)
chr4 (295-385)||(10389544-10389634)
chr4 (295-385)||(3335954-3336044)
chr4 (308-374)||(21090362-21090428)
chr4 (295-385)||(29966535-29966625)
chr4 (295-385)||(46990921-46991011)
chr4 (308-385)||(37188398-37188475)
chr4 (317-385)||(49410432-49410500)
chr4 (283-385)||(6973019-6973122)
chr4 (295-358)||(49680766-49680829)
chr4 (281-361)||(31381491-31381571)
chr4 (280-377)||(47320204-47320304)
chr4 (295-385)||(868372-868462)
chr4 (295-385)||(35261401-35261490)
chr4 (281-385)||(43153793-43153894)
chr4 (328-376)||(28857619-28857667)
chr4 (295-374)||(12265682-12265760)
chr4 (394-480)||(35851278-35851365)
chr4 (396-482)||(35800749-35800835)
chr4 (295-385)||(52097706-52097796)
chr4 (295-385)||(18138707-18138794)
chr4 (394-478)||(43373783-43373867)
chr4 (295-385)||(49125920-49126007)
chr4 (295-374)||(7273612-7273691)
chr4 (330-385)||(56040491-56040546)
chr4 (433-499)||(19432382-19432448)
chr4 (335-377)||(22611400-22611442)
chr4 (335-385)||(27652152-27652202)
chr4 (394-480)||(43077272-43077358)
chr4 (335-377)||(43510413-43510455)
chr4 (308-385)||(35964779-35964856)
chr4 (330-374)||(2520999-2521043)
chr4 (295-374)||(2624671-2624750)
chr4 (328-375)||(6155063-6155110)
chr4 (339-374)||(11299864-11299899)
chr4 (318-385)||(21554623-21554690)
chr4 (430-477)||(46487621-46487668)
chr4 (336-385)||(1621362-1621411)
chr4 (336-377)||(4142615-4142656)
chr4 (295-362)||(8670717-8670781)
chr4 (344-385)||(22301059-22301100)
chr4 (337-374)||(26633523-26633560)
chr4 (337-374)||(43095848-43095885)
chr4 (338-374)||(19853365-19853401)
chr4 (281-385)||(19896416-19896523)
chr4 (301-373)||(21364943-21365015)
chr4 (328-376)||(24736198-24736246)
chr4 (330-378)||(26090755-26090803)
chr4 (330-374)||(35348527-35348571)
chr4 (429-477)||(41117661-41117709)
chr4 (338-374)||(48257485-48257521)
[»] chr8 (50 HSPs)
chr8 (280-385)||(14906697-14906803)
chr8 (295-385)||(29777423-29777513)
chr8 (281-385)||(9619132-9619237)
chr8 (295-374)||(4809179-4809258)
chr8 (295-385)||(9498389-9498479)
chr8 (295-385)||(11267212-11267302)
chr8 (296-385)||(2656074-2656163)
chr8 (280-385)||(11725884-11725991)
chr8 (295-385)||(9072922-9073012)
chr8 (295-385)||(37565669-37565759)
chr8 (280-385)||(44099710-44099816)
chr8 (308-385)||(11464375-11464452)
chr8 (283-385)||(32724258-32724361)
chr8 (295-385)||(19876402-19876492)
chr8 (295-385)||(33896290-33896380)
chr8 (295-385)||(34612008-34612098)
chr8 (308-385)||(43192150-43192227)
chr8 (394-496)||(30235790-30235892)
chr8 (281-385)||(43889899-43890004)
chr8 (295-378)||(28240052-28240135)
chr8 (281-374)||(23851269-23851363)
chr8 (295-385)||(33342638-33342727)
chr8 (295-385)||(44578234-44578324)
chr8 (281-385)||(16794495-16794599)
chr8 (295-371)||(17949736-17949812)
chr8 (295-371)||(39152932-39153008)
chr8 (280-377)||(1236487-1236587)
chr8 (335-377)||(15344507-15344549)
chr8 (335-377)||(15433572-15433614)
chr8 (335-377)||(15524876-15524918)
chr8 (295-385)||(43135374-43135459)
chr8 (328-385)||(24099097-24099154)
chr8 (403-499)||(5214978-5215073)
chr8 (280-374)||(30568110-30568208)
chr8 (330-377)||(7883084-7883131)
chr8 (318-361)||(27746928-27746971)
chr8 (295-374)||(33299069-33299148)
chr8 (327-374)||(41060103-41060150)
chr8 (302-385)||(42447824-42447907)
chr8 (295-361)||(17430665-17430731)
chr8 (295-374)||(21237990-21238071)
chr8 (316-385)||(11197087-11197156)
chr8 (330-374)||(16928600-16928644)
chr8 (330-385)||(3673632-3673687)
chr8 (330-385)||(14544738-14544793)
chr8 (339-385)||(3240571-3240617)
chr8 (335-377)||(14585876-14585918)
chr8 (295-361)||(17427015-17427081)
chr8 (336-374)||(31013457-31013495)
chr8 (318-368)||(36568889-36568939)
[»] chr5 (55 HSPs)
chr5 (295-385)||(7241983-7242073)
chr5 (295-385)||(7247158-7247248)
chr5 (280-385)||(27266633-27266739)
chr5 (295-385)||(16981491-16981581)
chr5 (280-385)||(21060057-21060163)
chr5 (280-385)||(34881916-34882022)
chr5 (295-385)||(42580087-42580177)
chr5 (281-385)||(3271177-3271282)
chr5 (281-385)||(41184216-41184320)
chr5 (295-385)||(27752124-27752214)
chr5 (280-385)||(30298408-30298514)
chr5 (295-385)||(43148926-43149016)
chr5 (281-385)||(781587-781692)
chr5 (282-385)||(18677242-18677345)
chr5 (295-385)||(8771971-8772061)
chr5 (295-378)||(7150125-7150208)
chr5 (295-385)||(30299043-30299133)
chr5 (295-385)||(35475128-35475218)
chr5 (308-385)||(19259615-19259692)
chr5 (281-385)||(43008090-43008195)
chr5 (295-362)||(10649864-10649931)
chr5 (295-385)||(7886730-7886819)
chr5 (295-385)||(15571106-15571196)
chr5 (295-385)||(20257486-20257576)
chr5 (280-361)||(30371844-30371926)
chr5 (295-383)||(11768200-11768288)
chr5 (295-374)||(4954202-4954281)
chr5 (322-382)||(7612875-7612935)
chr5 (400-499)||(31721982-31722080)
chr5 (295-353)||(19280727-19280785)
chr5 (394-499)||(31742469-31742574)
chr5 (314-362)||(2057648-2057696)
chr5 (394-496)||(24436133-24436234)
chr5 (308-357)||(37483274-37483323)
chr5 (330-385)||(11976780-11976835)
chr5 (330-385)||(13422121-13422176)
chr5 (338-385)||(26877962-26878009)
chr5 (328-374)||(10332390-10332436)
chr5 (295-385)||(14726268-14726361)
chr5 (425-477)||(8731274-8731326)
chr5 (283-385)||(28235786-28235891)
chr5 (330-374)||(34945592-34945636)
chr5 (337-385)||(37985965-37986013)
chr5 (330-377)||(13007425-13007472)
chr5 (295-362)||(22978714-22978781)
chr5 (330-377)||(24229629-24229676)
chr5 (330-372)||(9113570-9113612)
chr5 (335-377)||(19103317-19103359)
chr5 (335-377)||(28540756-28540798)
chr5 (336-377)||(26825626-26825667)
chr5 (338-374)||(6011991-6012027)
chr5 (337-385)||(6217087-6217134)
chr5 (330-374)||(25980356-25980400)
chr5 (429-477)||(26045656-26045704)
chr5 (330-374)||(38597996-38598040)
[»] chr3 (55 HSPs)
chr3 (295-385)||(3848709-3848799)
chr3 (280-385)||(25162630-25162736)
chr3 (281-374)||(32607674-32607768)
chr3 (295-385)||(36906316-36906406)
chr3 (280-385)||(2342642-2342748)
chr3 (295-385)||(25631316-25631406)
chr3 (295-385)||(38440381-38440471)
chr3 (295-385)||(30648509-30648599)
chr3 (281-374)||(44907174-44907268)
chr3 (281-369)||(50611193-50611282)
chr3 (295-385)||(12116292-12116382)
chr3 (280-385)||(17237999-17238105)
chr3 (295-385)||(21916667-21916757)
chr3 (295-385)||(46934833-46934923)
chr3 (280-385)||(51202038-51202144)
chr3 (280-359)||(4178785-4178865)
chr3 (295-362)||(35498990-35499057)
chr3 (318-385)||(49552037-49552104)
chr3 (295-385)||(22803224-22803314)
chr3 (281-385)||(29503655-29503760)
chr3 (316-385)||(37169423-37169492)
chr3 (280-385)||(38854813-38854916)
chr3 (295-385)||(39917189-39917278)
chr3 (394-499)||(1652547-1652651)
chr3 (280-374)||(53807650-53807747)
chr3 (295-385)||(35175592-35175684)
chr3 (328-385)||(50194178-50194235)
chr3 (297-385)||(46178762-46178850)
chr3 (280-374)||(628715-628812)
chr3 (280-385)||(46979774-46979880)
chr3 (324-385)||(14464704-14464765)
chr3 (397-461)||(7966773-7966837)
chr3 (281-385)||(44959767-44959873)
chr3 (330-377)||(52922962-52923009)
chr3 (295-385)||(21488287-21488377)
chr3 (335-385)||(27856353-27856403)
chr3 (296-373)||(31794274-31794351)
chr3 (336-385)||(46304371-46304420)
chr3 (394-461)||(33753637-33753704)
chr3 (330-377)||(6954541-6954588)
chr3 (330-377)||(21313232-21313279)
chr3 (396-499)||(30935048-30935150)
chr3 (330-385)||(36461282-36461337)
chr3 (327-374)||(48199980-48200027)
chr3 (335-377)||(21289664-21289706)
chr3 (295-385)||(24396306-24396396)
chr3 (335-385)||(38142713-38142763)
chr3 (335-385)||(51487270-51487320)
chr3 (281-374)||(6910227-6910320)
chr3 (336-377)||(9998663-9998704)
chr3 (336-377)||(10108432-10108473)
chr3 (336-377)||(10229672-10229713)
chr3 (340-377)||(43488445-43488482)
chr3 (330-374)||(40556901-40556945)
chr3 (330-374)||(45568290-45568334)
[»] chr7 (56 HSPs)
chr7 (295-385)||(433481-433571)
chr7 (280-385)||(26492562-26492668)
chr7 (280-385)||(46822212-46822318)
chr7 (281-385)||(34773908-34774013)
chr7 (281-385)||(45198808-45198913)
chr7 (280-375)||(23085728-23085824)
chr7 (295-385)||(7640565-7640655)
chr7 (281-385)||(32684865-32684970)
chr7 (295-377)||(22927660-22927742)
chr7 (281-385)||(35495950-35496055)
chr7 (295-367)||(1485046-1485118)
chr7 (295-378)||(2843031-2843114)
chr7 (295-385)||(20116778-20116868)
chr7 (280-385)||(42066836-42066942)
chr7 (280-385)||(21266587-21266695)
chr7 (289-378)||(23786779-23786868)
chr7 (295-382)||(26583910-26583997)
chr7 (280-385)||(14627672-14627777)
chr7 (283-372)||(42311488-42311578)
chr7 (280-369)||(1448606-1448696)
chr7 (295-385)||(31235574-31235664)
chr7 (295-385)||(46339251-46339341)
chr7 (299-378)||(13592304-13592382)
chr7 (280-385)||(6559074-6559180)
chr7 (295-385)||(32521719-32521809)
chr7 (308-362)||(48208154-48208208)
chr7 (295-374)||(35261505-35261584)
chr7 (295-385)||(17611588-17611678)
chr7 (280-385)||(23425147-23425253)
chr7 (328-385)||(24351182-24351239)
chr7 (330-385)||(19404602-19404657)
chr7 (283-373)||(35667009-35667100)
chr7 (396-499)||(38485873-38485975)
chr7 (326-385)||(42408534-42408593)
chr7 (323-385)||(17222818-17222880)
chr7 (295-385)||(37849036-37849126)
chr7 (330-377)||(8001391-8001438)
chr7 (330-385)||(34899452-34899507)
chr7 (295-385)||(6002224-6002314)
chr7 (280-377)||(37837250-37837350)
chr7 (330-374)||(40993359-40993403)
chr7 (330-385)||(28407763-28407818)
chr7 (335-378)||(39707628-39707671)
chr7 (330-377)||(48316657-48316704)
chr7 (281-370)||(20083550-20083640)
chr7 (295-353)||(43369564-43369622)
chr7 (394-499)||(9350018-9350122)
chr7 (336-385)||(28476417-28476466)
chr7 (320-361)||(36143965-36144006)
chr7 (295-344)||(46818194-46818243)
chr7 (336-385)||(48208098-48208147)
chr7 (425-477)||(13312173-13312225)
chr7 (327-375)||(26610622-26610670)
chr7 (330-374)||(26623634-26623678)
chr7 (330-374)||(42978812-42978856)
chr7 (338-378)||(46918744-46918784)
[»] chr1 (66 HSPs)
chr1 (295-385)||(7342923-7343013)
chr1 (280-385)||(9686979-9687085)
chr1 (295-385)||(51868435-51868525)
chr1 (280-374)||(30879287-30879382)
chr1 (295-385)||(9172691-9172781)
chr1 (295-385)||(9180673-9180763)
chr1 (295-385)||(11454138-11454228)
chr1 (295-385)||(19715685-19715775)
chr1 (295-385)||(19723514-19723604)
chr1 (295-385)||(25406074-25406164)
chr1 (295-385)||(45805619-45805709)
chr1 (295-385)||(50165889-50165979)
chr1 (295-385)||(51872064-51872154)
chr1 (295-374)||(11709497-11709576)
chr1 (280-385)||(5324333-5324438)
chr1 (280-385)||(20266503-20266609)
chr1 (280-385)||(31837035-31837141)
chr1 (308-385)||(5701460-5701537)
chr1 (281-385)||(35584398-35584502)
chr1 (280-385)||(45425841-45425946)
chr1 (295-383)||(39987622-39987709)
chr1 (295-385)||(33291208-33291298)
chr1 (280-385)||(34519329-34519435)
chr1 (280-385)||(48217638-48217744)
chr1 (302-385)||(9919589-9919671)
chr1 (295-385)||(32676925-32677015)
chr1 (306-385)||(40880814-40880893)
chr1 (295-374)||(50271930-50272009)
chr1 (313-374)||(28035351-28035410)
chr1 (295-385)||(31130383-31130473)
chr1 (280-385)||(38520309-38520415)
chr1 (295-385)||(50148571-50148661)
chr1 (280-378)||(27914881-27914977)
chr1 (295-385)||(3871609-3871698)
chr1 (295-368)||(40646893-40646964)
chr1 (399-496)||(11839527-11839624)
chr1 (326-385)||(7997990-7998049)
chr1 (295-358)||(30818154-30818217)
chr1 (280-374)||(41081478-41081573)
chr1 (295-385)||(44637618-44637708)
chr1 (400-487)||(2987806-2987892)
chr1 (396-498)||(4652095-4652196)
chr1 (315-385)||(27872938-27873008)
chr1 (280-385)||(33816942-33817048)
chr1 (280-385)||(33876412-33876518)
chr1 (335-377)||(44543472-44543514)
chr1 (328-385)||(47133095-47133152)
chr1 (336-384)||(15431517-15431565)
chr1 (283-374)||(24583153-24583247)
chr1 (283-374)||(24583349-24583443)
chr1 (335-374)||(49627116-49627155)
chr1 (335-385)||(31919181-31919231)
chr1 (330-382)||(4413309-4413361)
chr1 (394-482)||(37582408-37582495)
chr1 (327-374)||(39927377-39927424)
chr1 (322-385)||(48365583-48365646)
chr1 (338-377)||(49504448-49504487)
chr1 (326-377)||(50730823-50730874)
chr1 (339-377)||(7836650-7836688)
chr1 (328-385)||(32678986-32679041)
chr1 (335-385)||(36775560-36775610)
chr1 (321-374)||(5600968-5601021)
chr1 (280-340)||(14545721-14545782)
chr1 (337-374)||(44915842-44915879)
chr1 (337-377)||(29738516-29738556)
chr1 (429-477)||(34775212-34775260)
[»] scaffold0443 (1 HSPs)
scaffold0443 (295-385)||(4402-4492)
[»] scaffold0146 (1 HSPs)
scaffold0146 (280-385)||(16094-16200)
[»] scaffold0003 (1 HSPs)
scaffold0003 (295-385)||(361589-361679)
[»] scaffold0022 (1 HSPs)
scaffold0022 (281-385)||(83212-83316)
[»] scaffold0014 (1 HSPs)
scaffold0014 (281-375)||(201148-201243)
[»] scaffold0311 (1 HSPs)
scaffold0311 (295-385)||(8888-8978)
[»] scaffold0495 (1 HSPs)
scaffold0495 (297-385)||(5595-5686)
[»] scaffold0009 (1 HSPs)
scaffold0009 (330-385)||(57933-57988)
[»] scaffold0136 (1 HSPs)
scaffold0136 (330-377)||(9887-9934)
[»] scaffold0445 (1 HSPs)
scaffold0445 (330-385)||(1533-1588)
[»] scaffold0113 (1 HSPs)
scaffold0113 (295-374)||(36480-36559)
[»] scaffold0884 (1 HSPs)
scaffold0884 (330-372)||(1818-1860)
[»] scaffold0017 (1 HSPs)
scaffold0017 (336-385)||(32598-32647)
[»] scaffold0372 (1 HSPs)
scaffold0372 (301-373)||(9467-9539)


Alignment Details
Target: chr2 (Bit Score: 178; Significance: 9e-96; HSPs: 72)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 178; E-Value: 9e-96
Query Start/End: Original strand, 100 - 497
Target Start/End: Complemental strand, 6174320 - 6173890
Alignment:
Q  100 tactcctttagatactaattcaggaaactaatataaaaacattatatgggaaagtggtgaaaaataatatattcaag------aaagtaaaataattgtt 193  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  6174320 tactcctttagatactaattcaggaaactaatataaaaacattatatgggaaagtggtgaaaaataatatattcaacgttttaaaagtaaaataattgtt 6174221  T
Q  194 gttttcaataaacaatttctannnnnnnnn------aacgagtgttttagtgacatcggttgatatgactcattgtatannnnnnnnnnnnn------ga 281  Q
    ||||||||| |||||||| ||               ||| |||||||||| |||||||||||||||||| |||||||||                   ||    
T  6174220 gttttcaatgaacaatttttattttttgttttttctaactagtgttttagagacatcggttgatatgacccattgtatatatttttttttttttttttga 6174121  T
Q  282 caaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||    
T  6174120 caaaaacaaaatttattcatttattcaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatcca 6174021  T
Q  382 agtt---------------tggtgggttccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcc 466  Q
    ||||               || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| |    
T  6174020 agttaataacatccaagtttgatgggttccttatgggtgctgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccacctatatacgatgtc 6173921  T
Q  467 tttagtttgtactttccgtaacactggtctc 497  Q
    |||||||||||||||||||||||||||||||    
T  6173920 tttagtttgtactttccgtaacactggtctc 6173890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 15 - 90
Target Start/End: Complemental strand, 6175117 - 6175042
Alignment:
Q  15 gtaatttcttgtcataatttaaataattgtttaaatgatacattaaattatattaggaaaatgttaaaagagtatt 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6175117 gtaatttcttgtcataatttaaataattgtttaaatgatacattaaattatattaggaaaatgttaaaagagtatt 6175042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 83971 - 84061
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  83971 tattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 84061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 9986116 - 9986222
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  9986116 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacat 9986215  T
Q  379 tcaagtt 385  Q
     ||||||    
T  9986216 ccaagtt 9986222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 20046872 - 20046962
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  20046872 tattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaaatcacagcatccaagtt 20046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 27248925 - 27249031
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  27248925 gacaaaaacaaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacat 27249024  T
Q  379 tcaagtt 385  Q
     ||||||    
T  27249025 ccaagtt 27249031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 36234305 - 36234199
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||    
T  36234305 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacat 36234206  T
Q  379 tcaagtt 385  Q
     ||||||    
T  36234205 ccaagtt 36234199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 4228429 - 4228324
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||     
T  4228429 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatc 4228330  T
Q  380 caagtt 385  Q
    ||||||    
T  4228329 caagtt 4228324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 21570183 - 21570288
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||    
T  21570183 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggctgaatctgcgaacaaacttacagcatt 21570282  T
Q  380 caagtt 385  Q
    ||||||    
T  21570283 caagtt 21570288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 30420960 - 30420870
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  30420960 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 30420870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 7015485 - 7015591
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||| ||| ||| ||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| |||||||||||||||    
T  7015485 gacaaaaacaaaatgatatttattcattcaaatcgagagattacatcattcaacacagctaaaaacgtaacgaatgaatctgcgaacaaactcacagcat 7015584  T
Q  379 tcaagtt 385  Q
     ||||||    
T  7015585 ccaagtt 7015591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 8806157 - 8806067
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||| ||||||    
T  8806157 tattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaatctcacaacatccaagtt 8806067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 8971402 - 8971508
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  ||| |||| ||| ||||||||||||||||||||||||||||||||| || ||||||||||||| |||| |||||||||||||||    
T  8971402 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatcattcaacaccgctaagaatgtaaaggatgaatatgcgaacaaactcacagcat 8971501  T
Q  379 tcaagtt 385  Q
     ||||||    
T  8971502 ccaagtt 8971508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 22422035 - 22421929
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||  |||||||| |||||||||||||||||||||||||||| | |||||||||||||||    
T  22422035 gacaaaaacaaaatgatattcattcattcaaatcgagagattatgtcattcaataccgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcat 22421936  T
Q  379 tcaagtt 385  Q
     ||||||    
T  22421935 ccaagtt 22421929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 31580429 - 31580535
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||| |||    
T  31580429 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattgtacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacatcat 31580528  T
Q  379 tcaagtt 385  Q
     ||||||    
T  31580529 ccaagtt 31580535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 4193144 - 4193048
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||| ||||||||    
T  4193144 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacgccgctaaaaacgtaaaggatgaatctccgaacacactcacag 4193048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 33228778 - 33228857
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  33228778 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaacggatgaatctgcgaacaaactcaca 33228857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 40625834 - 40625937
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    |||||||||||  |||||||  ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| | ||||||    
T  40625834 aaaaacaaaatgatattcatccattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaatgatgaatctgcgaacaaactcataacattca 40625933  T
Q  382 agtt 385  Q
    ||||    
T  40625934 agtt 40625937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 7558743 - 7558653
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||||||| ||||| ||||||    
T  7558743 tattcattcattcaaatcgagagattacatcatttaacaccactaaaaacgtaaaggatgaatttgcgaacaaactcatagcatccaagtt 7558653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 21132123 - 21132033
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||| |||||    
T  21132123 tattcattcattcaaatcgaaaaattacatcattcaacaccgctaaaaacgtaagggatgaatctgcgaacaaactcacaacatttaagtt 21132033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 25087342 - 25087237
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||| || ||||||||||||||||||||| | ||||||||||| |||    
T  25087342 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccact-aaaacgtaaaggatgaatctgggaacaaactcacatcat 25087244  T
Q  379 tcaagtt 385  Q
     ||||||    
T  25087243 ccaagtt 25087237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 34600521 - 34600415
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  ||| |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||| || |||    
T  34600521 gacaaaaacaaaatgatatccattcattcaaatcgagagattacatcgttcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcgcatcat 34600422  T
Q  379 tcaagtt 385  Q
     ||||||    
T  34600421 ccaagtt 34600415  T

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Target: chr2; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 41431319 - 41431229
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||| | ||||||||| ||| ||||||    
T  41431319 tattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggataaatctgcgaataaactcacaacatccaagtt 41431229  T

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Target: chr2; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 280 - 360
Target Start/End: Complemental strand, 3725487 - 3725406
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctg 360  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  3725487 gacaaaaacaaaatgatattcatttattcaaatcgagagattacatcatttaacaccactaaaaacgtaaaggatgaatctg 3725406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 38575263 - 38575363
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||| ||    
T  38575263 aaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgct-aaaacataaaggatgaatctgcgaacaaactcacaacatcca 38575361  T
Q  382 ag 383  Q
    ||    
T  38575362 ag 38575363  T

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Target: chr2; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 27949730 - 27949627
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    |||||||||||  |||||||| ||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||| || ||||||||||| ||| ||    
T  27949730 aaaaacaaaatgatattcattcatttaaatcgagatattatatcattcaacaccgctaaaaacgtaaatgatgaatctccgaacaaactcacaacatcca 27949631  T
Q  382 agtt 385  Q
    ||||    
T  27949630 agtt 27949627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 40659746 - 40659812
Alignment:
Q  319 ttacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  40659746 ttacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 40659812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 2808247 - 2808352
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||  ||||||||||| |||||||||||||||||||||||||| | || |||||||| |||    
T  2808247 gacaaaaacaaaatgatattcattcattcaaatcgagagattgtatcattcaacatcgctaaaaacgtaaaggatgaatctgtgaac-aactcacatcat 2808345  T
Q  379 tcaagtt 385  Q
     ||||||    
T  2808346 ccaagtt 2808352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 3268625 - 3268715
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||  |||| || ||||||||  ||||||||||||||| ||||||    
T  3268625 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatataaatgacgaatctgcaaacaaactcacagcatccaagtt 3268715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 295 - 352
Target Start/End: Complemental strand, 45128483 - 45128426
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaagga 352  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  45128483 tattcattaattcaaatcgagagattacatcattcaacaccgctaaaaacataaagga 45128426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 17319584 - 17319533
Alignment:
Q  322 catcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 373  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  17319584 catcattcaacaccggtaaaaacgtaaaggatgaatctgcgaacaaactcac 17319533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 9374353 - 9374420
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 362  Q
    |||||||| ||| ||||||| ||| ||||||||||||||| |||||||||||||| ||||||| ||||    
T  9374353 tattcattcattcaaatcgacagagtacatcattcaacacggctaaaaacgtaaatgatgaatatgcg 9374420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 31788710 - 31788655
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  31788710 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagcatccaagtt 31788655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 4779061 - 4778960
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    ||||||||||||| | |||||||| ||| ||||||| ||| |||||||  | ||| || ||||||||||||||||| |||||||||| ||||||||||||    
T  4779061 gacaaaaacaaaactatattcattcattcaaatcgatagagtacatcaaatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacag 4778962  T
Q  376 ca 377  Q
    ||    
T  4778961 ca 4778960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 12236848 - 12236925
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 372  Q
    |||||||| ||| |||| ||||||||| |||||||| ||| |||||||| |||||| ||||||||||| | |||||||    
T  12236848 tattcattcatttaaattgagagattatatcattcagcactgctaaaaatgtaaagaatgaatctgcgaataaactca 12236925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 396 - 489
Target Start/End: Original strand, 18681386 - 18681478
Alignment:
Q  396 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaaca 489  Q
    ||||||||||||||| |||| ||| ||| | || || |||||||| |||||||||| ||||||||||  || ||||||||||||||| ||||||    
T  18681386 cttatgggtgttgattgcagaggtttctttgttagtatttgttttcgggtgttccgcctatatacgacacc-ttagtttgtactttctgtaaca 18681478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 30923250 - 30923355
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| |||| || ||| ||||||||| ||||  ||||||| ||||||  ||||||||||| ||||||| ||| ||||    
T  30923250 acaaaaacaaaatgatattcattcattcaaattgatagagtacatcatttaacattgctaaaatcgtaaataatgaatctgcgaacaaacttacaacatt 30923349  T
Q  380 caagtt 385  Q
    ||||||    
T  30923350 caagtt 30923355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 29044053 - 29043993
Alignment:
Q  400 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatac 460  Q
    |||||||||||||||||||||||| | ||||| ||||||||  ||||||||| ||||||||    
T  29044053 tgggtgttgatcgcaggggtgtctttgttggtttttgttttcaggtgttccgcctatatac 29043993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 29173563 - 29173607
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| |||||||||||||||||||||||||||| |||||||||||    
T  29173563 aacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 29173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 385
Target Start/End: Complemental strand, 17151670 - 17151623
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||||    
T  17151670 taaaaacgtaaagggtgaatatgcggacaaactcacaacattcaagtt 17151623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 24461731 - 24461653
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||| || ||| ||||| || ||||| |||||||||||||||||||||| ||||| |||||||||||    
T  24461731 tattcattcattcaaattgatagaatacataat-caacatcgctaaaaacgtaaaggatgaacctgcgaacaaactcaca 24461653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 377
Target Start/End: Complemental strand, 38445412 - 38445373
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  38445412 taaaaacgtaaaggatgaatctgcgaacaaactcacagca 38445373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 41712579 - 41712658
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||| || | |||||||||||||||| | ||||||| ||||| ||| |||||||| |||||||||||    
T  41712579 tattcattcatttaaattgaaaaattacatcattcaacatcactaaaaatgtaaatgataaatctgcgaacaaactcaca 41712658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 4100622 - 4100545
Alignment:
Q  295 tattcatttattaaaatcgagagattacat-cattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| ||||||| ||||||||| ||   |||| ||||||||||||||||| |||||||||| |||||||||||    
T  4100622 tattcattcattcaaatcgatagattacataca---aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 4100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 17248998 - 17249040
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||||| |||||||||||| ||||||||||||||    
T  17248998 cgctaaaaacgtaaatgatgaatctgcgaacaaactcacagca 17249040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 27477419 - 27477349
Alignment:
Q  315 gagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||||  | |||||| ||||| |||||||||||| ||| ||||||| ||| ||||||    
T  27477419 gagattacatcattcaacattgttaaaaatgtaaatgatgaatctgcgaacatactcacaacatccaagtt 27477349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 32197567 - 32197633
Alignment:
Q  320 tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagttt 386  Q
    ||||||||||||||||||||||||  || ||||| ||| |||| ||||||||||| ||| |||||||    
T  32197567 tacatcattcaacaccgctaaaaatatataggataaatatgcgaacaaactcacaacatccaagttt 32197633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 299 - 385
Target Start/End: Complemental strand, 36324141 - 36324055
Alignment:
Q  299 catttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| |||| || | |||||||||||||||| || ||||||||||| ||||||||  ||| ||||| ||||| ||| ||||||    
T  36324141 catttattcaaattgatatattacatcattcaacatcgttaaaaacgtaacggatgaatacgcgaacaaattcacaacatccaagtt 36324055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 428 - 477
Target Start/End: Original strand, 4472282 - 4472331
Alignment:
Q  428 tggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    |||||||| |||| || |||||||||||||||||| ||||||||||||||    
T  4472282 tggtgtttattttcggatgttccgtctatatacgacgcctttagtttgta 4472331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 39641121 - 39641186
Alignment:
Q  320 tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||   |||||||||||||| |||||| |||| ||||||||||| ||| ||||||    
T  39641121 tacatcattcaacaatactaaaaacgtaaagaatgaatttgcgaacaaactcacatcatccaagtt 39641186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 477
Target Start/End: Complemental strand, 25504633 - 25504581
Alignment:
Q  425 ttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||||||| |||||||||||| ||||||||||||  |||||| |||||||    
T  25504633 ttttggtgtttatttttgggtgtttcgtctatatacggcgccttttgtttgta 25504581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 37613916 - 37613992
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactc 371  Q
    |||||||  ||| ||||||| ||| ||||  |||||||| ||||||||  |||||||||||||||||| ||||||||    
T  37613916 tattcatccattcaaatcgatagagtacactattcaacatcgctaaaatagtaaaggatgaatctgcgaacaaactc 37613992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 5427715 - 5427762
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| |||||||| |||||||| |||||||||| ||||||||||||||    
T  5427715 aacatcgctaaaagcgtaaagggtgaatctgcgaacaaactcacagca 5427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 18763717 - 18763678
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  18763717 cgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 18763678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 36942968 - 36943015
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| |||||||||| ||| ||||||||||    
T  36942968 aacatcgctaaaaacgtaaagggtgaatctgcgaacatactcacagca 36943015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 35220577 - 35220535
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||    
T  35220577 cgctaaaaacgtaaagggtgaatatgcgaacaaactcacagca 35220535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Complemental strand, 281042 - 281005
Alignment:
Q  340 aaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  281042 aaaacgtaaagggtgaatctgcgaacaaactcacagca 281005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 459066 - 459142
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 372  Q
    |||||||| ||| ||||||| ||| || ||||||||||||| |||||||| |||| ||| ||||| || |||||||||    
T  459066 tattcattcattcaaatcgatagagtatatcattcaacaccactaaaaacataaaagat-aatctacgaacaaactca 459142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 4903997 - 4904046
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||| ||||||| || ||||||||||| ||| ||||||    
T  4903997 gctaaaaacgtaaaggctgaatctacgaacaaactcacaacatccaagtt 4904046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 477
Target Start/End: Complemental strand, 22884852 - 22884807
Alignment:
Q  432 gtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    |||| |||| |||||||||| |||||||||| ||||||||||||||    
T  22884852 gtttattttcgggtgttccgcctatatacgacgcctttagtttgta 22884807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 31902187 - 31902083
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactgg 493  Q
    ||||||| |||||||||||||||| || ||   |||||||| ||||| ||||||||   |||||||||  | ||||  ||||||||||| ||||||| ||    
T  31902187 tccttattggtgttgatcgcagggttgccttggttggtgttagttttcgggtgttctacctatatacggcg-ctttgatttgtactttctgtaacaccgg 31902089  T
Q  494 tctctg 499  Q
    ||||||    
T  31902088 tctctg 31902083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 32678939 - 32678980
Alignment:
Q  333 accgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||| |||| |||||||||||| |||||||||||    
T  32678939 accgctaaaaacataaatgatgaatctgcgaacaaactcaca 32678980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 4041448 - 4041484
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||| |||||||||| |||||||||||    
T  4041448 taaaaacgtaaagggtgaatctgcgaacaaactcaca 4041484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 4975085 - 4975133
Alignment:
Q  429 ggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||| |||| |||||||| | |||||||||| ||||||||||||||    
T  4975085 ggtgtttattttcgggtgttcagcctatatacgacgcctttagtttgta 4975133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 4992993 - 4993041
Alignment:
Q  429 ggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||| |||| |||||||| | |||||||||| ||||||||||||||    
T  4992993 ggtgtttattttcgggtgttcagcctatatacgacgcctttagtttgta 4993041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 7696301 - 7696349
Alignment:
Q  429 ggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||| ||||||||||||||| ||||||||| | ||||| |||||||    
T  7696301 ggtgtttatttttgggtgttccgcctatatacggttccttttgtttgta 7696349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 8809526 - 8809478
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||| |||| ||||||| ||||||||||| ||| ||||||    
T  8809526 ctaaaaacgtaaaagatggatctgcgaacaaactcacaacatccaagtt 8809478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 373
Target Start/End: Complemental strand, 23903626 - 23903554
Alignment:
Q  301 tttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 373  Q
    |||||| |||| || |||||||||||||||| | || |||||| | ||||||||| | |||| ||||||||||    
T  23903626 tttattcaaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcac 23903554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 280 - 343
Target Start/End: Original strand, 26025270 - 26025334
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaa 343  Q
    ||||||||||||||  |||||||| ||| |||| ||||||||| |||||||||||  ||||||||    
T  26025270 gacaaaaacaaaatgatattcattcattcaaattgagagattatatcattcaacattgctaaaaa 26025334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 31128638 - 31128686
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||| ||||||||| |||||||| ||||||||||| ||| ||||||    
T  31128638 ctaaaaatgtaaaggattaatctgcgaacaaactcacaacatccaagtt 31128686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 32913489 - 32913441
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| ||||||||||||||||||| ||| ||||||| ||| ||||||    
T  32913489 ctaaaatcgtaaaggatgaatctgcgaacatactcacaacatccaagtt 32913441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 33585589 - 33585625
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||||||||| |||| |||||||||||    
T  33585589 taaaaacgtaaaggatgaatatgcgaacaaactcaca 33585625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 1e-36; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 8497271 - 8497165
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  8497271 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcat 8497172  T
Q  379 tcaagtt 385  Q
     ||||||    
T  8497171 ccaagtt 8497165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 12653247 - 12653141
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||    
T  12653247 gacaaaaacaaaatgatattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtacaggatgaatctgcgaacaaactcacaacat 12653148  T
Q  379 tcaagtt 385  Q
     ||||||    
T  12653147 ccaagtt 12653141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 25064523 - 25064433
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  25064523 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 25064433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 7875821 - 7875924
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||    
T  7875821 aaaaacaaaatgatattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaagtcacagcatcca 7875920  T
Q  382 agtt 385  Q
    ||||    
T  7875921 agtt 7875924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 7880879 - 7880982
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    |||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||| ||    
T  7880879 aaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaagtcacagcatcca 7880978  T
Q  382 agtt 385  Q
    ||||    
T  7880979 agtt 7880982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 16419445 - 16419355
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| || |||||||    
T  16419445 tattcatttattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacaacaatcaagtt 16419355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 17237076 - 17237166
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||    
T  17237076 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacacactcacaacatccaagtt 17237166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 17335040 - 17334950
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  17335040 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagtt 17334950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 23947091 - 23947197
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||    
T  23947091 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacgccgctaaaaacgtaaaggatgaatctacgaacaaactcacaacat 23947190  T
Q  379 tcaagtt 385  Q
     ||||||    
T  23947191 ccaagtt 23947197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 4088762 - 4088657
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| |||| |||||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  4088762 acaaaaacaaaatgatattcattcattcaaattgagagattatttcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 4088663  T
Q  380 caagtt 385  Q
    ||||||    
T  4088662 caagtt 4088657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 370
Target Start/End: Original strand, 4984357 - 4984432
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaact 370  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4984357 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaact 4984432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 8196197 - 8196287
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| ||||||||||| ||||||    
T  8196197 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatttgcgaacacactcacagcatccaagtt 8196287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 12059563 - 12059653
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  12059563 tattcattcatttaaatcaagagattatatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 12059653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 283 - 374
Target Start/End: Original strand, 33740355 - 33740447
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||  |||||||| ||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  33740355 aaaaacaaaataatattcattcatttaaatcaagagattacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 33740447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 8027908 - 8027987
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  8027908 tattcattcattcaaatcgagagattacattattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcaca 8027987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 280 - 375
Target Start/End: Original strand, 3173986 - 3174082
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    ||||||||||||||  ||||| || ||| ||||||| | ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  3173986 gacaaaaacaaaataatattcgttcattcaaatcgaaaaattacatcattcaacaccgctaagaacgtaaaggatgaatctgcgaacaaactcacag 3174082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 4468853 - 4468761
Alignment:
Q  282 caaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 373  Q
    ||||||||||||  |||||||| ||| |||||||||| ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||    
T  4468853 caaaaacaaaatgatattcattcatttaaatcgagagtttacatcattcaacaccgctaaaagtgtaaaggatgaatctgcgaacaaactcac 4468761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 28634903 - 28634993
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| || ||||||||||||||| |||||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  28634903 tattcattcattcaaatcgataggttacatcattcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagtt 28634993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 35001877 - 35001787
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| | |||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  35001877 tattcattcattcaaatcaaaagattacatcattcaacatcgctaaaaacgtaaaggattaatctgcgaacaaactcacaacatccaagtt 35001787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 370
Target Start/End: Original strand, 16892619 - 16892681
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaact 370  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||| |||||||    
T  16892619 aaatcgagagattacatcattcaacaccactaaaaacgtaaatgatgattctgcgaacaaact 16892681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 400 - 481
Target Start/End: Original strand, 27774906 - 27774986
Alignment:
Q  400 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtacttt 481  Q
    ||||||||||||| ||| |||||| | ||||||||||||||||| |||||| ||||||||||| ||| ||||||||||||||    
T  27774906 tgggtgttgatcgtaggagtgtctttgttggtgtttgtttttggatgttccatctatatacgacgcc-ttagtttgtacttt 27774986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 12168965 - 12168888
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||||||||  |||||||||||||||||||||||||| ||||||||||||||||  | |||||||||    
T  12168965 tattcattcattcaaatcgaga--ttacatcattcaacaccgctaaaaacttaaaggatgaatctgctaataaactcaca 12168888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 394 - 478
Target Start/End: Original strand, 12794422 - 12794506
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtac 478  Q
    ||||| ||||||||||||||||  |||||| | |||||||| ||||| || |||||||||||||||||  |||||||||||||||    
T  12794422 tccttttgggtgttgatcgcagatgtgtctttgttggtgttcgttttcggatgttccgtctatatacggcgcctttagtttgtac 12794506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 394 - 480
Target Start/End: Complemental strand, 6946946 - 6946859
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtg-tttgtttttgggtgttccgtctatatacgatgcctttagtttgtactt 480  Q
    ||||||||||||||||||||| |||||||| | |||||| |||||||| | ||||||| ||||||||||  |||||| ||||||||||    
T  6946946 tccttatgggtgttgatcgcaagggtgtctttgttggtgttttgttttcgagtgttccatctatatacggcgccttttgtttgtactt 6946859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 10228967 - 10228876
Alignment:
Q  297 ttcatttattaaaatcgagagat---tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| ||| ||||||||||||   || |||||||||||||| |||||||||||||||||||| |||| ||||||| |||| || ||||||    
T  10228967 ttcattcattcaaatcgagagataattatatcattcaacaccgttaaaaacgtaaaggatgaatttgcgaacaaacttacagtatccaagtt 10228876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 395 - 482
Target Start/End: Original strand, 9224240 - 9224326
Alignment:
Q  395 ccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttc 482  Q
    ||||||||| ||||||||||||| ||||| | ||||||||| |||| ||||||||| |||||||||||  ||||| | ||||||||||    
T  9224240 ccttatggg-gttgatcgcagggatgtctttgttggtgtttattttcgggtgttccttctatatacgacaccttttggttgtactttc 9224326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 299 - 385
Target Start/End: Complemental strand, 33110894 - 33110808
Alignment:
Q  299 catttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||| |||||||| ||||| |||||||||||| || ||||||||||||||||||| |||  | ||||||||| ||| ||||||    
T  33110894 cattcattcaaatcgagtgattatatcattcaacactgccaaaaacgtaaaggatgaatatgcaaataaactcacaacatccaagtt 33110808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 280 - 352
Target Start/End: Complemental strand, 7028158 - 7028085
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaagga 352  Q
    ||||||||||||||  |||||||| ||| |||||||||||||| |||||||||||||||| |||| | ||||||    
T  7028158 gacaaaaacaaaatgatattcattcattcaaatcgagagattatatcattcaacaccgctgaaaatgcaaagga 7028085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 355
Target Start/End: Complemental strand, 34489501 - 34489428
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatga 355  Q
    |||||||||||  |||| ||| ||| ||||||| ||||||||| |||||| |||||||||||||||||||||||    
T  34489501 aaaaacaaaatgatatttattcattcaaatcgatagattacattattcaaaaccgctaaaaacgtaaaggatga 34489428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 400 - 499
Target Start/End: Complemental strand, 26215792 - 26215693
Alignment:
Q  400 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtctctg 499  Q
    |||||||||| ||| ||||| ||| | ||||||||||||||  |||| ||||  |||||||  |||||||| |||||| |||| |||||| |||||||||    
T  26215792 tgggtgttgaccgctggggtatctttattggtgtttgttttcaggtggtccgcatatatacagtgcctttaatttgtattttctgtaacattggtctctg 26215693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 546271 - 546229
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||| |||||||||||||| ||||||||||||||    
T  546271 cgctaaaaacgtataggatgaatctgcgaacaaactcacagca 546229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 606503 - 606402
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    ||||||||||||||  |||||||| ||| ||||||| ||| |||||||  | ||| || || |||||||||||||| |||||||||| ||||||||||||    
T  606503 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcagatacaaacatcgttaaaaacgtaaagggtgaatctgcgaacaaactcacag 606404  T
Q  376 ca 377  Q
    ||    
T  606403 ca 606402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 480
Target Start/End: Complemental strand, 26534506 - 26534421
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactt 480  Q
    ||||| |||||||| || |||||||||||| | |||||  |||||||  ||||||||| |||||||||| |||||| ||||||||||    
T  26534506 tccttttgggtgtttattgcaggggtgtctttgttggt-attgttttcaggtgttccgcctatatacgacgccttttgtttgtactt 26534421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 67852 - 67893
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||| |||||||||| ||||||||||||||    
T  67852 gctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 67893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 33053019 - 33053068
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||| ||||| |||| ||||||||||||||| ||||||    
T  33053019 gctaaaaacgtaaagggtgaatatgcgaacaaactcacagcatccaagtt 33053068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 385
Target Start/End: Original strand, 8518921 - 8518997
Alignment:
Q  309 aatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||| ||||||||||||| | ||||||||||| | ||||||||| | |||  |||||| ||||||||||    
T  8518921 aatcaagagattgcatcattcaacacggttaaaaacgtaaggaatgaatctgtgaacactctcacaccattcaagtt 8518997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 6957389 - 6957342
Alignment:
Q  327 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||| ||||||||||||||||| |||||||| | |||||||||||    
T  6957389 ttcaacatcgctaaaaacgtaaagggtgaatctgtgaacaaactcaca 6957342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 23128863 - 23128816
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||| ||||||| |||||||||| ||||||||||||||    
T  23128863 aacatcgctaaaaatgtaaagggtgaatctgcgaacaaactcacagca 23128816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 30776903 - 30776864
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  30776903 cgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 30776864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 30894843 - 30894789
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| |||||||||||||||||||||||||||  | ||||||||||||| ||||||    
T  30894843 aacatcgctaaaaacgtaaaggatgaatctgc-aataaactcacagcatccaagtt 30894789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 32327065 - 32327112
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| ||||| |||| ||||||||||||||    
T  32327065 aacatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagca 32327112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 338 - 372
Target Start/End: Original strand, 1933545 - 1933579
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactca 372  Q
    ||||||||||||||||||||||||| |||||||||    
T  1933545 taaaaacgtaaaggatgaatctgcgaacaaactca 1933579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 9341502 - 9341540
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  9341502 gctaaaaacgtaaagggtgaatctgcgaacaaactcaca 9341540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 15612366 - 15612440
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaa 356  Q
    |||||||||| | |||||||| ||| | ||||| | | |||||||||||||||| ||||||||||||| ||||||    
T  15612366 aaaaacaaaactatattcattcattcagatcgataaagtacatcattcaacaccactaaaaacgtaaaagatgaa 15612440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 20619708 - 20619662
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaa 341  Q
    |||||||| ||| ||||| |||||||| |||||||||||||||||||    
T  20619708 tattcattcatttaaatcaagagattatatcattcaacaccgctaaa 20619662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 14174922 - 14174971
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||| | |||||||||| ||||||||||| || |||||||    
T  14174922 gctaaaaacgtaaaaggtgaatctgcgaacaaactcacatcactcaagtt 14174971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 14179458 - 14179507
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||| | |||||||||| ||||||||||| || |||||||    
T  14179458 gctaaaaacgtaaaaggtgaatctgcgaacaaactcacatcactcaagtt 14179507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 3913419 - 3913463
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| || ||||||| |||||||||||    
T  3913419 aacatcgctaaaaacgtaaagggtgcatctgcgaacaaactcaca 3913463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 335 - 375
Target Start/End: Original strand, 7515052 - 7515092
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    ||||||||||||||||| ||||| |||| ||||||||||||    
T  7515052 cgctaaaaacgtaaagggtgaatttgcgaacaaactcacag 7515092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 30493777 - 30493733
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||| ||||| |||||    
T  30493777 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaattcaca 30493733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 1e-36; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 9528651 - 9528757
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  9528651 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacat 9528750  T
Q  379 tcaagtt 385  Q
    |||||||    
T  9528751 tcaagtt 9528757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 53616425 - 53616530
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||     
T  53616425 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatc 53616524  T
Q  380 caagtt 385  Q
    ||||||    
T  53616525 caagtt 53616530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 20569572 - 20569477
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  20569572 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 20569477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 25274198 - 25274103
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25274198 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 25274103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 2115362 - 2115468
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| ||    
T  2115362 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcacagtat 2115461  T
Q  379 tcaagtt 385  Q
     ||||||    
T  2115462 ccaagtt 2115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 38706484 - 38706590
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||    
T  38706484 gacaaaaacaaaatcatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacatcat 38706583  T
Q  379 tcaagtt 385  Q
     ||||||    
T  38706584 ccaagtt 38706590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 9645299 - 9645404
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||| ||| ||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||     
T  9645299 acaaaaacaaaataatatttattcattcaaatcgagagattacatcattcaacaccgcaaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 9645398  T
Q  380 caagtt 385  Q
    ||||||    
T  9645399 caagtt 9645404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 308 - 385
Target Start/End: Complemental strand, 47417948 - 47417871
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  47417948 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcattcaagtt 47417871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 298 - 385
Target Start/End: Complemental strand, 44947708 - 44947621
Alignment:
Q  298 tcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  44947708 tcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 44947621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 34024228 - 34024318
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  34024228 tattcattcattcaaatcgagagattacaccattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 34024318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 45227831 - 45227921
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||    
T  45227831 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagtt 45227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 50766302 - 50766392
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||    
T  50766302 tattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtagatgatgaatctacgaacaaactcacagcattcaagtt 50766392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 56199395 - 56199305
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  56199395 tattcattcattcaaatcgagagatcacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 56199305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 9284226 - 9284131
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||    
T  9284226 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctacgaacaaactcaca 9284131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 382
Target Start/End: Complemental strand, 43444691 - 43444604
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 382  Q
    |||||||| ||| |||| |||||||||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||    
T  43444691 tattcattcattcaaattgagagattacatcattcaacaccgttaagaacgtaaaggatgaatctgcgaacaaactcacagcattcaa 43444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 4644157 - 4644067
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||| ||| ||||||    
T  4644157 tattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctgcgaacaagctcacaacatccaagtt 4644067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 51318284 - 51318194
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  51318284 tattcattcatttaaatcgagagattacatcattcaacactgctaaaaacgtaaaggatgaatctgtgaacaaactcacatcatccaagtt 51318194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 1532207 - 1532117
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| |||||| ||| ||||||    
T  1532207 tattcattcattcaaatcgagagattacgtcattcaacaccgctaaaaacataaaggatgaatctgcgaacaagctcacaacatccaagtt 1532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 10359323 - 10359428
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||  |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||    
T  10359323 gacaaaaacaaaatgatattcattcatccaaatcgagagattacatcattcaacaccgctaaaaacgtaaa-gatgaatttgcgaacaaactcacatcat 10359421  T
Q  379 tcaagtt 385  Q
     ||||||    
T  10359422 ccaagtt 10359428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 10389544 - 10389634
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||| |||||||||||||||||||| |||||||||||||  || ||||||||||||||| ||||||    
T  10389544 tattcattcattcaaatcgagagattacaccattcaacaccgctaaaaacataaaggatgaatccacgaacaaactcacagcatccaagtt 10389634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 3335954 - 3336044
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| | ||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||    
T  3335954 tattcattcattcaaatcaatagagtacatcattcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcaaaacattcaagtt 3336044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 374
Target Start/End: Complemental strand, 21090428 - 21090362
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  21090428 aaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcaca 21090362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 29966625 - 29966535
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| ||| |||||||||||||||| || ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  29966625 tattcattcatttaaatcaagaaattacatcattcaacatcgttaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 29966535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 46990921 - 46991011
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| ||| ||||||||||||| || ||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  46990921 tattcattcattcaaatcgatagagtacatcattcaacgccactaaaaacgtaaatgatgaatctgcgaacaaactcacaacattcaagtt 46991011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 37188398 - 37188475
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| ||| ||||||||||| ||||||    
T  37188398 aaatcgagagattacatcattcaacaccgctaaaaacgcaaaagataaatctgcgaacacactcacagcatccaagtt 37188475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 49410500 - 49410432
Alignment:
Q  317 gattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||| ||||||    
T  49410500 gattacatcattcaacaccgctaaaaacgtaaaggatgaatcagcgaacaaactcacatcatccaagtt 49410432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 6973122 - 6973019
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    |||||||||||  |||||||| ||| |||| ||||| |||||||||||||||||| |||||| || ||||||||||||| | ||||||||| ||||| ||    
T  6973122 aaaaacaaaatgatattcattcatttaaattgagaggttacatcattcaacaccgttaaaaatgtgaaggatgaatctgtgaacaaactcatagcatcca 6973023  T
Q  382 agtt 385  Q
    ||||    
T  6973022 agtt 6973019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 358
Target Start/End: Complemental strand, 49680829 - 49680766
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatc 358  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  49680829 tattcattcatttaaatcgagaggttacatcattcaacaccgctaaaaacgtaaaggataaatc 49680766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 281 - 361
Target Start/End: Original strand, 31381491 - 31381571
Alignment:
Q  281 acaaaaacaaaat-ttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 361  Q
    ||||||| ||||| |||||| || ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  31381491 acaaaaataaaatcttattcgttcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaa-gatgaatctgc 31381571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 47320204 - 47320304
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 376  Q
    ||||||||||||||| |||||||| ||| ||||||| ||| |||||||   |||| | |||||||||||||||| ||||||||||| |||||||||||||    
T  47320204 gacaaaaacaaaattatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaagaatgaatctgcgaacaaactcacagc 47320303  T
Q  377 a 377  Q
    |    
T  47320304 a 47320304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 868462 - 868372
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||  || |||||||||||||| |||||| ||||||||||||||| |||||| |||||||| | ||||| |||||  |||||||||    
T  868462 tattcattcgtttaaatcgagagattatatcatttaacaccgctaaaaacataaaggttgaatctgtgaacaaaatcacaatattcaagtt 868372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 35261490 - 35261401
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||  || |||||||||||||||  |||||||||||||||||||||||||  ||||||||||| ||| ||||||    
T  35261490 tattcattcattcaaatcgat-gagtacatcattcaacacttctaaaaacgtaaaggatgaatctgcaaacaaactcacaacatccaagtt 35261401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 43153793 - 43153894
Alignment:
Q  281 acaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattc 380  Q
    |||||||||||   |||| ||| ||| ||||||||||||| |||||||||| | |||||||||||||||||||||||   || ||||||||||| ||| |    
T  43153793 acaaaaacaaatgatatttattcattcaaatcgagagattgcatcattcaatatcgctaaaaacgtaaaggatgaat---cgaacaaactcacaacatcc 43153889  T
Q  381 aagtt 385  Q
    |||||    
T  43153890 aagtt 43153894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 28857667 - 28857619
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 376  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  28857667 tcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacagc 28857619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 12265760 - 12265682
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| ||||||| || ||||||||||||||| |||||||||||| || |||||||||| | |||||||||||    
T  12265760 tattcattcattcaaatcgataggttacatcattcaacatcgctaaaaacgt-aatgatgaatctgtgaacaaactcaca 12265682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 394 - 480
Target Start/End: Original strand, 35851278 - 35851365
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtg-tttgtttttgggtgttccgtctatatacgatgcctttagtttgtactt 480  Q
    ||||| |||||||||||||||||||||||| | ||| || |||||||||  |||||||||||||||| | ||||||| || |||||||    
T  35851278 tccttttgggtgttgatcgcaggggtgtctttattgatgttttgtttttatgtgttccgtctatatatggtgccttttgtgtgtactt 35851365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 482
Target Start/End: Original strand, 35800749 - 35800835
Alignment:
Q  396 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttc 482  Q
    ||||||||||||||||||| |||| | |   ||||||||||||||| ||||||||||||||||||   ||| ||| |||||||||||    
T  35800749 cttatgggtgttgatcgcatgggtattttcgttggtgtttgtttttcggtgttccgtctatatacagcgccgttattttgtactttc 35800835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 52097706 - 52097796
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| | ||| |||||||||| | ||||||||||||||||||| ||||| |||| | ||||||||| ||| ||||||    
T  52097706 tattcattcattcaaatcaacagagtacatcattcgataccgctaaaaacgtaaagggtgaatatgcgaataaactcacaacatccaagtt 52097796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 18138707 - 18138794
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| | | | |||||||||||||||||||||||||||||||   || |||||| ||||||||||| ||| ||||||    
T  18138707 tattcattcattcaaatcaataaagtacatcattcaacaccgctaaaaacgtaaag---gagtctgcgaacaaactcacaacatccaagtt 18138794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 478
Target Start/End: Complemental strand, 43373867 - 43373783
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtac 478  Q
    |||||||| ||||||||| || |||||||| | ||||  |||||||| ||||||| || |||||||| | |||||||||||||||    
T  43373867 tccttatgtgtgttgatcacatgggtgtctttgttgggttttgttttcgggtgtttcgcctatatacaacgcctttagtttgtac 43373783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 49125920 - 49126007
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| | | | |||||||||||||||||||||||||||||||   || |||||| ||||||||||| ||| ||||||    
T  49125920 tattcattcattcaaatcaataaagtacatcattcaacaccgctaaaaacgtaaag---gagtctgcgaacaaactcacaacatccaagtt 49126007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 7273612 - 7273691
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||| || ||| || || ||||||||||| |||||||||||| ||| |||||||| |||||||||||    
T  7273612 tattcattcattcaaattgatagagtatattattcaacaccgttaaaaacgtaaatgataaatctgcgaacaaactcaca 7273691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 56040491 - 56040546
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||||||||||| ||||||||||  |||||||||||||| ||||||    
T  56040491 aacatcgctaaaaacgtaaagggtgaatctgcgagcaaactcacagcatccaagtt 56040546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 433 - 499
Target Start/End: Original strand, 19432382 - 19432448
Alignment:
Q  433 tttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtctctg 499  Q
    |||||||| || |||||||||||||||||  |||||| |||||||| ||| ||||||||||| ||||    
T  19432382 tttgttttcggatgttccgtctatatacggcgccttttgtttgtaccttctgtaacactggtatctg 19432448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 22611442 - 22611400
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  22611442 cgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 22611400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 27652202 - 27652152
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||| |||||||||||||| ||||||||||| || |||||||    
T  27652202 cgctaaaaacgtataggatgaatctgcgaacaaactcacaacactcaagtt 27652152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 480
Target Start/End: Original strand, 43077272 - 43077358
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactt 480  Q
    ||||| || ||||||||||||||||||||| | ||||||||| ||||  ||||||| | |||||||||| |  ||| ||||||||||    
T  43077272 tccttttgagtgttgatcgcaggggtgtctttgttggtgtttattttcaggtgttctgcctatatacgacgtattttgtttgtactt 43077358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 43510455 - 43510413
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||||||| |||||||||| ||||||||||||||    
T  43510455 cgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 43510413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 35964779 - 35964856
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||| |||  ||| |||||||||||||||||||||||||| |||| | |||| |||| |||||| ||| ||||||    
T  35964779 aaatcgatagaggacaccattcaacaccgctaaaaacgtaaagaatgagtttgcgaacaatctcacaacatccaagtt 35964856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 2521043 - 2520999
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  2521043 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 2520999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 2624750 - 2624671
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||| |||||||||||  || |||| |||||||| ||||||||||  ||||| |||||| |||| |||||||||||    
T  2624750 tatttattcattaaaatcgatggagtacaccattcaacgccgctaaaaaaataaagaatgaatttgcgaacaaactcaca 2624671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 6155063 - 6155110
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    |||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  6155063 tcaacatcgctaaaaacataaagggtgaatctgcgaacaaactcacag 6155110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 374
Target Start/End: Original strand, 11299864 - 11299899
Alignment:
Q  339 aaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||||||||||||| |||||||||||    
T  11299864 aaaaacgtaaaggatgaatctgcgaacaaactcaca 11299899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 21554623 - 21554690
Alignment:
Q  318 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||| ||||||  ||||||||| |||||||||||| |||| |||||||||  |||| ||||||    
T  21554623 attacatcaatcaacattgctaaaaacataaaggatgaatatgcgaacaaactcattgcatccaagtt 21554690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 430 - 477
Target Start/End: Original strand, 46487621 - 46487668
Alignment:
Q  430 gtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    |||||| |||| || ||||||| |||||||||||||||||||||||||    
T  46487621 gtgtttattttcggatgttccgcctatatacgatgcctttagtttgta 46487668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 1621362 - 1621411
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||| ||| |||||||||| ||||||||||| ||| ||||||    
T  1621362 gctaaaaacgtatagggtgaatctgcgaacaaactcacaacatccaagtt 1621411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 4142615 - 4142656
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||| ||||||| |||||||||| ||||||||||||||    
T  4142615 gctaaaaatgtaaagggtgaatctgcgaacaaactcacagca 4142656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 8670781 - 8670717
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 362  Q
    |||||||| ||| ||||||| |||||||||||   |||| ||||||||||||||| | ||||||||||    
T  8670781 tattcattcattcaaatcgatagattacatca---aacatcgctaaaaacgtaaaaggtgaatctgcg 8670717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 385
Target Start/End: Complemental strand, 22301100 - 22301059
Alignment:
Q  344 cgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||| ||||||||||| ||| ||||||    
T  22301100 cgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 22301059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Original strand, 26633523 - 26633560
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  26633523 ctaaaaacgtaaagggtgaatctgcgaacaaactcaca 26633560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 43095885 - 43095848
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  43095885 ctaaaaacgtaaatgatgaatctgcgaacaaactcaca 43095848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 19853365 - 19853401
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||| |||||||||| |||||||||||    
T  19853365 taaaaacgtaaagggtgaatctgcgaacaaactcaca 19853401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 19896416 - 19896523
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||  |||||||| ||| ||||  | ||| ||||||||  |||||| || |||||||||||| | |||||||||| ||||||||| | ||    
T  19896416 acaaaaacaaaatgatattcattcatttaaattaatagaatacatcataatcaacatcgttaaaaacgtaaatggtgaatctgcgaacaaactcatatca 19896515  T
Q  378 ttcaagtt 385  Q
    | ||||||    
T  19896516 tccaagtt 19896523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 21364943 - 21365015
Alignment:
Q  301 tttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 373  Q
    |||||| |||| || |||||||||||||||| | || |||||| | ||||||||| | |||| ||||||||||    
T  21364943 tttattcaaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcac 21365015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Original strand, 24736198 - 24736246
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 376  Q
    ||||||||| |||||| ||||||||||||| || | |||||||||||||    
T  24736198 tcaacaccgttaaaaatgtaaaggatgaatttgtgaacaaactcacagc 24736246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 378
Target Start/End: Original strand, 26090755 - 26090803
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||| ||||||||||||||||||||||||||   ||||| |||||||||    
T  26090755 aacaacgctaaaaacgtaaaggatgaatctgtaaacaaattcacagcat 26090803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 35348571 - 35348527
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||  |||||||||||    
T  35348571 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcaca 35348527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Complemental strand, 41117709 - 41117661
Alignment:
Q  429 ggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||| |||| |||||||||| ||||||||||||||| | |||||||    
T  41117709 ggtgtttattttcgggtgttccgcctatatacgatgcctcttgtttgta 41117661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 48257485 - 48257521
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||| |||||||||| |||||||||||    
T  48257485 taaaaacgtaaagggtgaatctgcgaacaaactcaca 48257521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 14906697 - 14906803
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  14906697 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaggat 14906796  T
Q  379 tcaagtt 385  Q
     ||||||    
T  14906797 ccaagtt 14906803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 29777513 - 29777423
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  29777513 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 29777423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 9619132 - 9619237
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    ||||||| |||||| |||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||     
T  9619132 acaaaaataaaattatattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 9619231  T
Q  380 caagtt 385  Q
    ||||||    
T  9619232 caagtt 9619237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 4809258 - 4809179
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4809258 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 4809179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 9498389 - 9498479
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  9498389 tattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcatccaagtt 9498479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 11267302 - 11267212
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  11267302 tattcattcattcaaatcgagagattacatcattcgacaccgctaaaaacgtaaaggatgaaactgcgaacaaactcacagcatccaagtt 11267212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 296 - 385
Target Start/End: Complemental strand, 2656163 - 2656074
Alignment:
Q  296 attcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||    
T  2656163 attcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatttgcgaacaaactcacagcatccaagtt 2656074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 11725991 - 11725884
Alignment:
Q  280 gacaaaaacaaaatt--tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||| |  |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||    
T  11725991 gacaaaaacaaaaatgatattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacatca 11725892  T
Q  378 ttcaagtt 385  Q
    | ||||||    
T  11725891 tccaagtt 11725884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 9073012 - 9072922
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |  |||||||||||||| ||||||    
T  9073012 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgtgagcaaactcacagcatccaagtt 9072922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 37565669 - 37565759
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||  |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  37565669 tattcattcatgcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagtt 37565759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 44099710 - 44099816
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||    
T  44099710 gacaaaaacaaaatgatatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgctaacaaactcacaacat 44099809  T
Q  379 tcaagtt 385  Q
     ||||||    
T  44099810 ccaagtt 44099816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 385
Target Start/End: Complemental strand, 11464452 - 11464375
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| ||||||    
T  11464452 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaactcacatcatccaagtt 11464375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 385
Target Start/End: Original strand, 32724258 - 32724361
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattca 381  Q
    ||||| |||||| |||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||| ||    
T  32724258 aaaaataaaattatattcattcatttgaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctacgaacaaactcacaacatcca 32724357  T
Q  382 agtt 385  Q
    ||||    
T  32724358 agtt 32724361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 19876492 - 19876402
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| ||||||    
T  19876492 tatttattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacatactcacagcatccaagtt 19876402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 33896380 - 33896290
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||| ||||||    
T  33896380 tatttattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaaaaaactcacaacatccaagtt 33896290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 34612098 - 34612008
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||||||||||||||||||||||||| |||| | |||||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  34612098 tattcattcattaaaatcgagagattacatcattgaacatcactaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagtt 34612008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 43192150 - 43192227
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| | ||| ||||||    
T  43192150 aaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcagaacatccaagtt 43192227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 394 - 496
Target Start/End: Complemental strand, 30235892 - 30235790
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactgg 493  Q
    ||||| ||||||||||||||| |||||||| | |||||||||||||| || ||||||| |||||||||  ||||||||||||||| ||| ||||||| ||    
T  30235892 tccttttgggtgttgatcgcaagggtgtctttgttggtgtttgttttcggatgttccgcctatatacggagcctttagtttgtaccttctgtaacaccgg 30235793  T
Q  494 tct 496  Q
    |||    
T  30235792 tct 30235790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 43889899 - 43890004
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| |||| |||||||||||| ||||||||  ||||||||||||||||||||||||||  ||||| |||||||||     
T  43889899 acaaaaacaaaatgatattcattcatttaaattgagagattacattattcaacaatgctaaaaacgtaaaggatgaatctgcaaacaaaatcacagcatc 43889998  T
Q  380 caagtt 385  Q
    ||||||    
T  43889999 caagtt 43890004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 378
Target Start/End: Complemental strand, 28240135 - 28240052
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||||||| ||| ||||||| || |||| |||||||||| |||||||||||||||||||||||||| | |||||||||||||||    
T  28240135 tattcattcattcaaatcgataggttacgtcattcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcacagcat 28240052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 23851269 - 23851363
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||  || ||||| ||| |||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||| |||||||||||    
T  23851269 acaaaaacaaaatgataatcattcattcaaatcgagagattacatcattcaacaccactaaaaaagtaaaagataaatctgcgaacaaactcaca 23851363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 33342727 - 33342638
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| | ||||||||| |||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||    
T  33342727 tattcattcattcaaatcaatagattacattattcaacaccgctaaaat-gtaaatgatgaatctgcgaacaaactcacagcattcaagtt 33342638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 44578324 - 44578234
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||||||| |  |||||| ||| ||| ||||||    
T  44578324 tattcatttattcaaatcgagagattacatcattcaacactgttaaaaacgcaaaggatgaatctgtgatcaaacttacatcatccaagtt 44578234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 16794599 - 16794495
Alignment:
Q  281 acaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattc 380  Q
    |||||| |||||  |||||||| ||| ||||||| | |||||||||||||| |||| |||||  |||||||||||||||||| ||||||||||| ||| |    
T  16794599 acaaaatcaaaaaatattcattcattcaaatcgatatattacatcattcaagaccgataaaatagtaaaggatgaatctgcgaacaaactcacaacatcc 16794500  T
Q  381 aagtt 385  Q
    |||||    
T  16794499 aagtt 16794495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 371
Target Start/End: Complemental strand, 17949812 - 17949736
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactc 371  Q
    |||||||| ||| |||| |||| |||| |||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  17949812 tattcattcattcaaattgagaaattatatcattcaacaccgctaaaaacgtgaagggtgaatctgcgaacaaactc 17949736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 295 - 371
Target Start/End: Original strand, 39152932 - 39153008
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactc 371  Q
    |||||||| ||| ||||||| | | ||||| ||||||||| ||||||||||||||||||||||||||| ||||||||    
T  39152932 tattcattcattcaaatcgataaagtacattattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaactc 39153008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 1236487 - 1236587
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 376  Q
    ||||||||||||||  |||||||| ||| ||||||| ||| |||||||   |||| |  ||||||||||||||||||||||||||| |||||||||||||    
T  1236487 gacaaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagattgctaaaaacgtaaaggatgaatctgcgaacaaactcacagc 1236586  T
Q  377 a 377  Q
    |    
T  1236587 a 1236587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 15344549 - 15344507
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15344549 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15344507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 15433614 - 15433572
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15433614 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15433572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 15524918 - 15524876
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  15524918 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 15524876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 43135374 - 43135459
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||     ||||||||||||||||||||||| ||||||| |||| ||| ||||||| ||| ||||||    
T  43135374 tattcattcattcaaatcgagagatta-----ttcaacaccgctaaaaacgtaaatgatgaatttgcgaacatactcacaacatccaagtt 43135459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 24099097 - 24099154
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||||| ||| ||||||    
T  24099097 tcaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagtt 24099154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 499
Target Start/End: Complemental strand, 5215073 - 5214978
Alignment:
Q  403 gtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtctctg 499  Q
    |||||||||| |||||||||| | || | ||||||||| ||||||| || |||||||||  ||||| ||||||||||||| ||||||  ||||||||    
T  5215073 gtgttgatcgtaggggtgtctttgttagagtttgttttcgggtgtttcgcctatatacggcgcctt-agtttgtactttctgtaacatcggtctctg 5214978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 30568110 - 30568208
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattca---acaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||| |||| || ||||||||||||  |   ||| ||||||||||||||||| |||||||||| |||||||||||    
T  30568110 gacaaaaacaaaatgatattcattcattcaaattgatagattacatcatatacaaacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 30568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 7883084 - 7883131
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  7883084 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 7883131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 27746928 - 27746971
Alignment:
Q  318 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 361  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  27746928 attacatcattcaataccgctaaaaacgtaaatgatgaatctgc 27746971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 33299148 - 33299069
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||| || ||| |||| || ||| |||||||||||||||| ||||||  ||||| |||||||||||| |||||||||||    
T  33299148 tattctttcatttaaattgatagaatacatcattcaacacccctaaaattgtaaatgatgaatctgcgaacaaactcaca 33299069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 41060103 - 41060150
Alignment:
Q  327 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||| | |||||||||||||||||||||||||| |||||||||||    
T  41060103 ttcaacatcactaaaaacgtaaaggatgaatctgcgaacaaactcaca 41060150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 385
Target Start/End: Original strand, 42447824 - 42447907
Alignment:
Q  302 ttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||| ||||| | |||||||||||||||| ||  |||||||||||||| |||||| || | ||||||||||| ||| ||||||    
T  42447824 ttattcaaatctaaagattacatcattcaatactactaaaaacgtaaagaatgaatatgtgaacaaactcacaacatccaagtt 42447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 17430665 - 17430731
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 361  Q
    |||||||| |||  ||| || |||||| ||||||||||| ||||||||||||||||||| |||||||    
T  17430665 tattcattgatttgaattgatagattatatcattcaacatcgctaaaaacgtaaaggataaatctgc 17430731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 21238071 - 21237990
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||| || ||| ||||||||  |||||| ||||||||||||||||| |||||||| | |||||||||||    
T  21238071 tattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaagggtgaatctgtgaacaaactcaca 21237990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 11197156 - 11197087
Alignment:
Q  316 agattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||  | |||||||||||| ||| ||||||   ||||||||||||||| ||||||    
T  11197156 agattacatcattcaacattgttaaaaacgtaaatgataaatctgtaaacaaactcacagcatccaagtt 11197087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 16928600 - 16928644
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  16928600 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 16928644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 3673687 - 3673632
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||||||||||| |||| ||||  ||||||||||||||| ||||||    
T  3673687 aacaacgctaaaaacgtaaagggtgaaactgcaaacaaactcacagcatccaagtt 3673632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 14544738 - 14544793
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| |||||||||||||| ||||||||||||  ||||||||||| ||| ||||||    
T  14544738 aacatcgctaaaaacgtaatggatgaatctgcaaacaaactcacaccatccaagtt 14544793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 3240617 - 3240571
Alignment:
Q  339 aaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||||||||| | ||||||||| ||| ||||||    
T  3240617 aaaaacgtaaaggatgaatctgcgaataaactcacaacatccaagtt 3240571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 14585918 - 14585876
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||    
T  14585918 cgctaaaaacgtatagggtgaatctgcgaacaaactcacagca 14585876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 361
Target Start/End: Original strand, 17427015 - 17427081
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 361  Q
    |||||||| |||  ||| || ||||||||  |||||||| ||||||||||||||||||| |||||||    
T  17427015 tattcattcatttgaattgatagattacaatattcaacatcgctaaaaacgtaaaggataaatctgc 17427081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 336 - 374
Target Start/End: Original strand, 31013457 - 31013495
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  31013457 gctaaaaacgtaaagggtgaatctgcgaacaaactcaca 31013495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 368
Target Start/End: Complemental strand, 36568939 - 36568889
Alignment:
Q  318 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaa 368  Q
    |||||| |||||||||  |||||||||||||| ||||||| ||||||||||    
T  36568939 attacaacattcaacattgctaaaaacgtaaaagatgaatttgcggacaaa 36568889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 3e-34; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 7242073 - 7241983
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7242073 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 7241983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 7247248 - 7247158
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7247248 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 7247158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 27266633 - 27266739
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  ||||| || ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  27266633 gacaaaaacaaaatggtattcgttcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcat 27266732  T
Q  379 tcaagtt 385  Q
     ||||||    
T  27266733 ccaagtt 27266739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 16981581 - 16981491
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  16981581 tattcatttattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaactcacaacatccaagtt 16981491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 21060057 - 21060163
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||| |||    
T  21060057 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacatactcacaacat 21060156  T
Q  379 tcaagtt 385  Q
     ||||||    
T  21060157 ccaagtt 21060163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 34882022 - 34881916
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||| |||    
T  34882022 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacataaaggatgaatctgcaaacaaactcacaacat 34881923  T
Q  379 tcaagtt 385  Q
     ||||||    
T  34881922 ccaagtt 34881916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 42580177 - 42580087
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||    
T  42580177 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctataaacaaactcacagcattcaagtt 42580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 3271177 - 3271282
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  || ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||     
T  3271177 acaaaaacaaaatgataatcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcataacatc 3271276  T
Q  380 caagtt 385  Q
    ||||||    
T  3271277 caagtt 3271282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 41184216 - 41184320
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  ||| |||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||     
T  41184216 acaaaaacaaaatgatatgcattcattcaaatcgagagattacatcatt-aacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatc 41184314  T
Q  380 caagtt 385  Q
    ||||||    
T  41184315 caagtt 41184320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 27752214 - 27752124
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||| ||||||    
T  27752214 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctacgaacatactcacagcatccaagtt 27752124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 30298514 - 30298408
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||||| ||| ||||||| |||    
T  30298514 gacaaaaacaaaatgatattcatttatttaaatcgagagactatatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacatactcacaacat 30298415  T
Q  379 tcaagtt 385  Q
     ||||||    
T  30298414 ccaagtt 30298408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 43149016 - 43148926
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  43149016 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 43148926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 781692 - 781587
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | ||||||| |||     
T  781692 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtgaaggatgaatctgcgaatatactcacaacatc 781593  T
Q  380 caagtt 385  Q
    ||||||    
T  781592 caagtt 781587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 282 - 385
Target Start/End: Original strand, 18677242 - 18677345
Alignment:
Q  282 caaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattc 380  Q
    ||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||| ||| |    
T  18677242 caaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgt-aaggatgaatctgcgaacaaacacacaacatcc 18677340  T
Q  381 aagtt 385  Q
    |||||    
T  18677341 aagtt 18677345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 8771971 - 8772061
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||  ||||||||| ||||| ||||||    
T  8771971 tattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatttgcaaacaaactcatagcatccaagtt 8772061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 7150125 - 7150208
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||||||| ||| |||||||||||||| |||||||||||||||||||||||||||| |  |||||||| |||||||||||||||    
T  7150125 tattcattcattcaaatcgagagattatatcattcaacaccgctaaaaacgtaaagaacaaatctgcgaacaaactcacagcat 7150208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 30299133 - 30299043
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||| ||||||    
T  30299133 tattcattcatttaaatcgagatattaaatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacatactcagaacatccaagtt 30299043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 35475128 - 35475218
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||||||| ||| ||||||    
T  35475128 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatatacgaacatactcacaacatccaagtt 35475218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 385
Target Start/End: Original strand, 19259615 - 19259692
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||| ||||||| |||||||||||||||| || |||||||| ||||||||||||||| ||||||    
T  19259615 aaatcgagagattacatcgttcaacatcgctaaaaacgtaaagaataaatctgcgaacaaactcacagcatccaagtt 19259692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 43008090 - 43008195
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| || | ||||||||| | |||     
T  43008090 acaaaaacaaaataatattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggataaatttgagaacaaactcataacatc 43008189  T
Q  380 caagtt 385  Q
    ||||||    
T  43008190 caagtt 43008195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 362
Target Start/End: Complemental strand, 10649931 - 10649864
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 362  Q
    |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||    
T  10649931 tattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaatgatgaatctgcg 10649864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 7886730 - 7886819
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||||||| || ||||||    
T  7886730 tattcattcattcaaat-gagagattacatcattcaacaccgctaagaacgtaaaagatgaatctgtgaacaaactcacagtatccaagtt 7886819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 15571196 - 15571106
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| | |||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||| ||| ||||||    
T  15571196 tattcattcattcaaatccatagattacatcattcaacaccactaaaaacataatggatgaatctgcgaacaaactcacaacatccaagtt 15571106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 20257486 - 20257576
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| |||||| ||||||||||| ||||||||||||||| |||||||||| | ||||||||||| ||| ||||||    
T  20257486 tattcattaattcaaatcgatagattatatcattcaacatcgctaaaaacgtaaatgatgaatctgtgaacaaactcacatcatccaagtt 20257576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 280 - 361
Target Start/End: Complemental strand, 30371926 - 30371844
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 361  Q
    ||||||||||||||  |||||||| ||| |||| |||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  30371926 gacaaaaacaaaatgatattcattcattcaaatagagagattacatcattaaacaccgctaaaaacgtaagggatgaatctgc 30371844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 11768288 - 11768200
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaag 383  Q
    |||||||| ||||||||||| |  |||||| |||||||| ||||||||||||| |||||||||||||| ||||||||||| ||| ||||    
T  11768288 tattcattcattaaaatcgatatgttacattattcaacatcgctaaaaacgtataggatgaatctgcgaacaaactcacatcatccaag 11768200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 4954281 - 4954202
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||| ||| |||||||||||||||||| ||||||||||||||||| ||||||||||||| || | |||||||||||    
T  4954281 tatttattcattcaaatcgagagattacatcgttcaacaccgctaaaaatgtaaaggatgaatatgtgaacaaactcaca 4954202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 382
Target Start/End: Original strand, 7612875 - 7612935
Alignment:
Q  322 catcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 382  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||||||||||| |||||||    
T  7612875 catcattcaacaccgctaaaaacgtaaaagatgaatttgcgaacaaactcacaacattcaa 7612935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 400 - 499
Target Start/End: Original strand, 31721982 - 31722080
Alignment:
Q  400 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtctctg 499  Q
    |||||||||||| || ||||| || | || ||||||||||| ||||||||||||||||||||  ||| ||||||||||||||| ||||||  ||||||||    
T  31721982 tgggtgttgatcacatgggtgcctttgttagtgtttgttttcgggtgttccgtctatatacggcgcc-ttagtttgtactttctgtaacatcggtctctg 31722080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 19280727 - 19280785
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggat 353  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||    
T  19280727 tattcattcattcaaatcgagagattacattattcaacaccgctaaaaacataaaggat 19280785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 31742469 - 31742574
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactgg 493  Q
    ||||||||||| ||||||||| ||| |||| |   |||||||||||| |||||||||| |||||||||  |||||| ||||||||||   ||||||| ||    
T  31742469 tccttatgggttttgatcgcaagggagtctttgcaggtgtttgttttcgggtgttccgcctatatacggcgccttttgtttgtacttcttgtaacaccgg 31742568  T
Q  494 tctctg 499  Q
    ||||||    
T  31742569 tctctg 31742574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 314 - 362
Target Start/End: Original strand, 2057648 - 2057696
Alignment:
Q  314 agagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 362  Q
    ||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  2057648 agagaatacatcattcaacaccgctaaaaacgtaaaggatgaatgtgcg 2057696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 394 - 496
Target Start/End: Original strand, 24436133 - 24436234
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactgg 493  Q
    |||||||| |||||||||| ||| |||||| | || ||||||||||| || ||||||| ||||||| || | | |||||||||||||||| |||||| ||    
T  24436133 tccttatgagtgttgatcgtaggagtgtctttgttagtgtttgttttcggatgttccgactatatatgacgtc-ttagtttgtactttccataacaccgg 24436231  T
Q  494 tct 496  Q
    |||    
T  24436232 tct 24436234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 37483323 - 37483274
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaat 357  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||||    
T  37483323 aaatcgatagattacatcattcaacatcgctaaaaacataaaggatgaat 37483274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 11976780 - 11976835
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  11976780 aacatcgctaaaaatgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 11976835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 13422176 - 13422121
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||| ||| ||||||    
T  13422176 aacatcgctaaaaacgtaaaggatgaatatgcgaacaaactcacaacatccaagtt 13422121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 338 - 385
Target Start/End: Original strand, 26877962 - 26878009
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  26877962 taaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 26878009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 374
Target Start/End: Original strand, 10332390 - 10332436
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||| |||||||||||||||||||||||||| | |||||||||||    
T  10332390 tcaacatcgctaaaaacgtaaaggatgaatctgtgaacaaactcaca 10332436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 14726268 - 14726361
Alignment:
Q  295 tattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| |||||||||||  | ||| || | ||||||||||||||| |||||||| | ||||||||||||||| ||||||    
T  14726268 tattcattcattcaaatcgatagattacatcagatacaaacatcactaaaaacgtaaagggtgaatctgtgaacaaactcacagcatccaagtt 14726361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 8731274 - 8731326
Alignment:
Q  425 ttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||||||| |||||||||||| ||||||||||||  |||||| |||||||    
T  8731274 ttttggtgtttatttttgggtgtttcgtctatatacggcgccttttgtttgta 8731326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 28235891 - 28235786
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaaca---ccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||||||||||  |||||||| ||  |||| |||||||| ||||||||||||   |||||||||  ||||| |||||||||||| ||||||||||| |||    
T  28235891 aaaaacaaaatgatattcattcatataaattgagagattgcatcattcaacaataccgctaaaat-gtaaatgatgaatctgcgaacaaactcacaacat 28235793  T
Q  379 tcaagtt 385  Q
     ||||||    
T  28235792 ccaagtt 28235786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 34945636 - 34945592
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  34945636 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 34945592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 385
Target Start/End: Original strand, 37985965 - 37986013
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  37985965 ctaaaaacgtaaaagatgaatctgcaaacaaactcacatcattcaagtt 37986013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 13007472 - 13007425
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  13007472 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagca 13007425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 22978714 - 22978781
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 362  Q
    |||||||| |||  |||||| | | ||||||||||||||| ||||| |||||||||||||||| ||||    
T  22978714 tattcattcattctaatcgataaagtacatcattcaacactgctaataacgtaaaggatgaatttgcg 22978781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 24229629 - 24229676
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||  |||||||||| ||||||||||||||    
T  24229629 aacatcgctaaaaacgtaaagagtgaatctgcgaacaaactcacagca 24229676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 9113570 - 9113612
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 372  Q
    |||| ||||||||||||||||| |||||||||| |||||||||    
T  9113570 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 9113612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 19103317 - 19103359
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||| |||||||||||||| ||||||||| ||||    
T  19103317 cgctaaaaacgtataggatgaatctgcgaacaaactcatagca 19103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 28540756 - 28540798
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||    
T  28540756 cgctaaaaacgtatagggtgaatctgcgaacaaactcacagca 28540798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 26825667 - 26825626
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  26825667 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 26825626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 374
Target Start/End: Original strand, 6011991 - 6012027
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||| |||||||||| |||||||||||    
T  6011991 taaaaacgtaaagggtgaatctgcgaacaaactcaca 6012027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 385
Target Start/End: Complemental strand, 6217134 - 6217087
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||| ||||| |||||||||| |||||||||||||| |||||||    
T  6217134 ctaaaaacgcaaagg-tgaatctgcgaacaaactcacagcactcaagtt 6217087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 25980400 - 25980356
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||  |||||||||||    
T  25980400 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcaca 25980356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Complemental strand, 26045704 - 26045656
Alignment:
Q  429 ggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||| ||||||| |||||||||||||||||  |||||| |||||||    
T  26045704 ggtgtttatttttggatgttccgtctatatacggcgccttttgtttgta 26045656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 38598040 - 38597996
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| ||||| |||| |||||||||||    
T  38598040 aacatcgctaaaaacgtaaagggtgaatttgcgaacaaactcaca 38597996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 3e-34; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 3848709 - 3848799
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  3848709 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 3848799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 25162736 - 25162630
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||    
T  25162736 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatccgcgaacaaactcacaacat 25162637  T
Q  379 tcaagtt 385  Q
     ||||||    
T  25162636 ccaagtt 25162630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 281 - 374
Target Start/End: Complemental strand, 32607768 - 32607674
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  32607768 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 32607674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 36906406 - 36906316
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  36906406 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 36906316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 2342748 - 2342642
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||| || |||||||||||| |||||||||||||||||||| |||||||||||||||    
T  2342748 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcgtttaacaccgctaaagacgtaaaggatgaatctgcgaacaaactcacagcat 2342649  T
Q  379 tcaagtt 385  Q
     ||||||    
T  2342648 ccaagtt 2342642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 25631316 - 25631406
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||| ||||||    
T  25631316 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 25631406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 38440381 - 38440471
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  38440381 tattcattcattcaaatcgaaagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgagcaaactcacagcatccaagtt 38440471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 30648509 - 30648599
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||| ||| ||||||    
T  30648509 tattcattcattcaaatcgagagattacataattcaacaccgctaaaaacataaaggatgaatctgcgaacaaactcacaacatccaagtt 30648599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 44907174 - 44907268
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||  |||||||| ||| ||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  44907174 acaaaaacaaaatgatattcattcattcaaatcgagatattacatcattcaacaacgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 44907268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 369
Target Start/End: Original strand, 50611193 - 50611282
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaac 369  Q
    |||||||||||||  |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50611193 acaaaaacaaaatgatattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaac 50611282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 12116382 - 12116292
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  | ||||||||||| ||| ||||||    
T  12116382 tattcattcattcaaatcgagagattacatcattcaacatcgctaaaaacgtaaaggatgaatctaagaacaaactcacaacatccaagtt 12116292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 17238105 - 17237999
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |||    
T  17238105 gacaaaaacaaaatgatattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggaagaatcagcgaacaaactcacatcat 17238006  T
Q  379 tcaagtt 385  Q
     ||||||    
T  17238005 ccaagtt 17237999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 21916757 - 21916667
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| ||| ||||||    
T  21916757 tattcatttatccaaatcgagatattacatcattcaacaccgctaaaaatgtaaaggatgaatctgagaacaaactcacatcatccaagtt 21916667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 46934923 - 46934833
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||| || ||||||||||| ||| ||||||    
T  46934923 tattcattcattcaaatcgagagattgcatcattcaacatcgctaaaaacgtaaaggatgaatctacgaacaaactcacaacatccaagtt 46934833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 51202038 - 51202144
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||| ||| ||| ||||||||||||||||| ||| | |||||||||||||||||| |||||||||||| |||||||||||||||    
T  51202038 gacaaaaacaaaatgatatttattcattcaaatcgagagattacattatttatcaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacagcat 51202137  T
Q  379 tcaagtt 385  Q
     ||||||    
T  51202138 ccaagtt 51202144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 280 - 359
Target Start/End: Complemental strand, 4178865 - 4178785
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatct 359  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4178865 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacactgctaaaaacgtaaaggatgaatct 4178785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 295 - 362
Target Start/End: Original strand, 35498990 - 35499057
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 362  Q
    |||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35498990 tattcattcattcaaatcgagggattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 35499057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 385
Target Start/End: Original strand, 49552037 - 49552104
Alignment:
Q  318 attacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  49552037 attacatcattcaacactgctaaaaacgtaaaggatgaatctgcgaacaaacttacagcatccaagtt 49552104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 22803314 - 22803224
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| || ||||||||||||||| ||||||||||||||||||| ||| || | ||||||||||||||| ||||||    
T  22803314 tattcattcatttaaatcgataggttacatcattcaacatcgctaaaaacgtaaaggataaatttgtgaacaaactcacagcatccaagtt 22803224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 29503760 - 29503655
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| ||||| | ||||||||| |||||||||||||||||| ||||||||||||| |||| ||| |||||||| ||     
T  29503760 acaaaaacaaaatgatattcattcattcaaatcaatagattacattattcaacaccgctaaaaatgtaaaggatgaatatgcgaacatactcacagaatc 29503661  T
Q  380 caagtt 385  Q
    ||||||    
T  29503660 caagtt 29503655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 37169492 - 37169423
Alignment:
Q  316 agattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| | ||||||||    
T  37169492 agattacatcattcaacaccgctaaaaacgtaaaggatgaatccgcgaagaaactcacaaccttcaagtt 37169423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 38854813 - 38854916
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||| |||||||   |||||||||||||||||||||||| |||| | ||||||||| |||    
T  38854813 gacaaaaacaaaatgatattcattcattcaaatcgagagattacgtcattca---ccgctaaaaacgtaaaggatgaatatgcgaaaaaactcacatcat 38854909  T
Q  379 tcaagtt 385  Q
     ||||||    
T  38854910 ccaagtt 38854916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 39917189 - 39917278
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||| || |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||||| | | ||||||||| ||| ||||||    
T  39917189 tattctttcattaaaattgagagatta-atcattcaacacctctaaaaacgtaaaggatgaatctgtgaataaactcacaacatccaagtt 39917278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 394 - 499
Target Start/End: Complemental strand, 1652651 - 1652547
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactgg 493  Q
    |||||||| |||||||||||| |||||||| | | ||||||| |||  |||||||||| |||||||||| ||||||||||||||||||| || |||  ||    
T  1652651 tccttatgagtgttgatcgcaagggtgtctttgtgggtgtttatttc-gggtgttccgcctatatacgacgcctttagtttgtactttctgtgacatcgg 1652553  T
Q  494 tctctg 499  Q
    ||||||    
T  1652552 tctctg 1652547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 53807650 - 53807747
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||||||||| | ||| |||||||   |||| | |||||||||||||||||||||||||||| |||||||||||    
T  53807650 gacaaaaacaaaatgatattcattcattaaaatcaatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 53807747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 35175684 - 35175592
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| || ||| ||||||||  |||||| ||||||||||||||| |||||||||||| ||||||||||| || |||||||    
T  35175684 tattcattcattcaaattgatagaatacatcataatcaacatcgctaaaaacgtaaaagatgaatctgcgaacaaactcacaacactcaagtt 35175592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 50194178 - 50194235
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  50194178 tcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 50194235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 46178850 - 46178762
Alignment:
Q  297 ttcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| ||| ||||||| | |||| |||||||||||||| |||||||||||| ||| || ||||| ||||||||||| ||| ||||||    
T  46178850 ttcattcattcaaatcgatatattatatcattcaacaccgttaaaaacgtaaaagataaaactgcgaacaaactcacatcatccaagtt 46178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 628715 - 628812
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||| |||| || ||| |||||||   |||| | |||||||||||||||||||||||||||| |||||||||||    
T  628715 gacaaaaacaaaatgatattcattcattcaaattgatagaatacatcaaaatcaagatcgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 628812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 46979774 - 46979880
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||| | | |||||| |||||||| || ||| ||||| |||||||| | ||||||||||||||||| |||||||  ||||||||| | |||    
T  46979774 gacaaaaacaaaactattttcattcattaaaattgatagagtacattattcaacagcactaaaaacgtaaaggattaatctgcaaacaaactcataacat 46979873  T
Q  379 tcaagtt 385  Q
     ||||||    
T  46979874 ccaagtt 46979880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 14464765 - 14464704
Alignment:
Q  324 tcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||||||| | ||| ||||||    
T  14464765 tcattcaacaccgttaaaaacgtaacggatgaatctgcgaacaaactcagaacatccaagtt 14464704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 461
Target Start/End: Complemental strand, 7966837 - 7966773
Alignment:
Q  397 ttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacg 461  Q
    |||||||||| |||||||  ||||||| | || ||||||||||| ||||||||||||||||||||    
T  7966837 ttatgggtgtggatcgcaaaggtgtctttgtttgtgtttgttttcgggtgttccgtctatatacg 7966773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 44959767 - 44959873
Alignment:
Q  281 acaaaaacaaaatttattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||| ||||||| ||| ||||||| ||| |||||||  | ||| || ||||||||||||||||| |||||||||  | ||||||||||||    
T  44959767 acaaaaacaaaatt-attcattcattcaaatcgatagaatacatcagatacaaacatcgctaaaaacgtaaagggtgaatctgcaaataaactcacagca 44959865  T
Q  378 ttcaagtt 385  Q
    | ||||||    
T  44959866 tccaagtt 44959873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 52922962 - 52923009
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  52922962 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 52923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 21488377 - 21488287
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||| ||||| | ||| || |||||| |||| | |||||||  | ||||||||||||||| | |||||||||| |||||||||    
T  21488377 tattcatttattcaaatcaatagagtatatcatttaacatcactaaaaattttaaggatgaatctgcgaataaactcacagtattcaagtt 21488287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 27856403 - 27856353
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  27856403 cgctaaaaacgtaaaagatgaatctgcgaacaaactcacatcatccaagtt 27856353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 296 - 373
Target Start/End: Complemental strand, 31794351 - 31794274
Alignment:
Q  296 attcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 373  Q
    ||||||| ||| ||||||| ||| ||||| |||||| | |||||||||||||||| ||||| ||||| | ||||||||    
T  31794351 attcattcatttaaatcgatagaatacattattcaatatcgctaaaaacgtaaagaatgaacctgcgaataaactcac 31794274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 46304371 - 46304420
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||| |||||||||| ||||||||||| || |||||||    
T  46304371 gctaaaaacgtaaagggtgaatctgcgaacaaactcacaacactcaagtt 46304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 33753637 - 33753704
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtg-tttgtttttgggtgttccgtctatatacg 461  Q
    ||||| ||||||||||||||| |||||||||| |||||| ||| ||||| ||||||| |||||||||||    
T  33753637 tccttttgggtgttgatcgca-gggtgtctctattggtgttttatttttaggtgttctgtctatatacg 33753704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 6954541 - 6954588
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| |||||||||  ||||||||||||||    
T  6954541 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacagca 6954588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Complemental strand, 21313279 - 21313232
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||| ||||||| ||||||| || ||||||||||||||    
T  21313279 aacaccgctaaaaatgtaaagggtgaatctccgaacaaactcacagca 21313232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 499
Target Start/End: Complemental strand, 30935150 - 30935048
Alignment:
Q  396 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtc 495  Q
    |||| ||||||||||  ||||| ||||| | |||||||||||||| ||||||| ||  |||||||||  || |||||||||| |||| |||| || ||||    
T  30935150 cttaagggtgttgattacagggttgtctttgttggtgtttgttttcgggtgtttcgcttatatacgacacc-ttagtttgtattttcagtaagaccggtc 30935052  T
Q  496 tctg 499  Q
    ||||    
T  30935051 tctg 30935048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 36461282 - 36461337
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||| ||||||| |||||||||  |||||||||||||| |||||||    
T  36461282 aacatcgctaaaaatgtaaagggtgaatctgctaacaaactcacagcactcaagtt 36461337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Complemental strand, 48200027 - 48199980
Alignment:
Q  327 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||| ||||||||||||||||| ||||| |||| |||||||||||    
T  48200027 ttcaacatcgctaaaaacgtaaagggtgaatttgcgaacaaactcaca 48199980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 377
Target Start/End: Original strand, 21289664 - 21289706
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||    
T  21289664 cgctaaaaacgtatagggtgaatctgcgaacaaactcacagca 21289706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 24396306 - 24396396
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| || ||| |||||||||||| |  ||||||||| |||| ||||||| || | |||||| |||| ||||||||||    
T  24396306 tattcattaattcaaattgatagagtacatcattcaatattgctaaaaacttaaatgatgaatttgtgtacaaacacacaacattcaagtt 24396396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 38142763 - 38142713
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||| ||||||| ||||| |||  ||||||||||||||||||||||    
T  38142763 cgctaaaaatgtaaagggtgaatatgcaaacaaactcacagcattcaagtt 38142713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 51487320 - 51487270
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||| |||||||||| ||||| ||||| || |||||||    
T  51487320 cgctaaaaacgtaaagggtgaatctgcgaacaaattcacaacactcaagtt 51487270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 374
Target Start/End: Original strand, 6910227 - 6910320
Alignment:
Q  281 acaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||  | |||||| ||| ||||| | ||| || ||  ||||||||||||| ||||||||||||| ||| || | |||||||||||    
T  6910227 acaaaaacaaaaaatgttcattcattcaaatcaatagagtatattgttcaacaccgctataaacgtaaaggataaatttgtgaacaaactcaca 6910320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 9998704 - 9998663
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  9998704 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 9998663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 10108473 - 10108432
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  10108473 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 10108432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 377
Target Start/End: Complemental strand, 10229713 - 10229672
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||| ||||||| || ||||||||||||||    
T  10229713 gctaaaaacgtaaagggtgaatctacgaacaaactcacagca 10229672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 377
Target Start/End: Original strand, 43488445 - 43488482
Alignment:
Q  340 aaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  43488445 aaaacgtaaatgatgaatctgcgaacaaactcacagca 43488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 40556945 - 40556901
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| |||||||||| |||||| |||||||||| |||||||||||    
T  40556945 aacatcgctaaaaacataaagggtgaatctgcgaacaaactcaca 40556901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 45568290 - 45568334
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||| | |||||||||    
T  45568290 aacatcgctaaaaacgtaaagggtgaatctgcgaataaactcaca 45568334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 6e-32; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 433481 - 433571
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  433481 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 433571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 26492668 - 26492562
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  26492668 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaagatgaatctgtgaacaaactcacagcat 26492569  T
Q  379 tcaagtt 385  Q
     ||||||    
T  26492568 ccaagtt 26492562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 46822318 - 46822212
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||| ||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  46822318 gacaaaaacaaaatgatattaattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaacaaactcacagcat 46822219  T
Q  379 tcaagtt 385  Q
     ||||||    
T  46822218 ccaagtt 46822212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 34774013 - 34773908
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||||||||     
T  34774013 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcaaacaaactcacagcatc 34773914  T
Q  380 caagtt 385  Q
    ||||||    
T  34773913 caagtt 34773908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 45198808 - 45198913
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||     
T  45198808 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacatactcacaacatc 45198907  T
Q  380 caagtt 385  Q
    ||||||    
T  45198908 caagtt 45198913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 280 - 375
Target Start/End: Complemental strand, 23085824 - 23085728
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    |||||||| |||||| |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  23085824 gacaaaaataaaattatattgattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacag 23085728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 7640565 - 7640655
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  7640565 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatccaagtt 7640655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 281 - 385
Target Start/End: Complemental strand, 32684970 - 32684865
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||     
T  32684970 acaaaaacaaaatgatattcattcattcaaatcgagagactacatcattcaacaccgctaaaaacgtaaaggatgaatctacgaacaaacttacagcatc 32684871  T
Q  380 caagtt 385  Q
    ||||||    
T  32684870 caagtt 32684865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 295 - 377
Target Start/End: Original strand, 22927660 - 22927742
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||    
T  22927660 tattcattaattcaaatcgagagattacatcattcaacaccgctaaaaatgtaaaggatgaatttgcgaacaaactcacagca 22927742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 35495950 - 35496055
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||| | ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||     
T  35495950 acaaaaacaaaatgatattcaatcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaagggatgaatctacgaacaaactcacatcatc 35496049  T
Q  380 caagtt 385  Q
    ||||||    
T  35496050 caagtt 35496055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 367
Target Start/End: Original strand, 1485046 - 1485118
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaa 367  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1485046 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaa 1485118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 295 - 378
Target Start/End: Original strand, 2843031 - 2843114
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||    
T  2843031 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatatgtgaacaaactcacagcat 2843114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 20116868 - 20116778
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||| | ||||||||||| ||| ||||||    
T  20116868 tattcattcattcaaatcgagagattacatcattccacaccgctaaaaacgtaaatgatgaatctgtgaacaaactcacaacatccaagtt 20116778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 42066836 - 42066942
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| || ||| |||| ||| ||||||| |||    
T  42066836 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaataaatatgcgaacatactcacaacat 42066935  T
Q  379 tcaagtt 385  Q
     ||||||    
T  42066936 ccaagtt 42066942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 21266695 - 21266587
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagaga--ttacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 376  Q
    ||||||||||||||  |||||||| ||| |||||||||||  ||||| ||||||||||||||||||||||||| |||||||||| | |||||||||||||    
T  21266695 gacaaaaacaaaatgatattcattcattcaaatcgagagagattacaccattcaacaccgctaaaaacgtaaatgatgaatctgtgaacaaactcacagc 21266596  T
Q  377 attcaagtt 385  Q
    || ||||||    
T  21266595 atccaagtt 21266587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 289 - 378
Target Start/End: Complemental strand, 23786868 - 23786779
Alignment:
Q  289 aaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||| |||||||| ||| || | |||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  23786868 aaaatatattcattcattcaattagagagattacatcattcaacacagctaaaaacgtaaatgatgaatctgcgaacaaactcacagcat 23786779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 295 - 382
Target Start/End: Complemental strand, 26583997 - 26583910
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 382  Q
    |||||||| ||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||||| | || ||||||||||||||    
T  26583997 tattcattcattcaaatcgtgagattacatcattcaacatcgttaaaaacgtaaaggatgaatctgcgaataagctcacagcattcaa 26583910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 14627672 - 14627777
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||||||||||  |||||||| |||||||||||||||||| |||| ||||| |||||||||    
T  14627672 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcatttgacaccgct-aaaacgtaaaggatgaatatgcgaacaaaatcacagcat 14627770  T
Q  379 tcaagtt 385  Q
     ||||||    
T  14627771 ccaagtt 14627777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 372
Target Start/End: Complemental strand, 42311578 - 42311488
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 372  Q
    |||||||||||  |||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||| |||| |||||||||    
T  42311578 aaaaacaaaatgatattcatttattcaaatcgagagattacattattcaacactgctagaaacgtaaaggatgaatttgcgaacaaactca 42311488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 280 - 369
Target Start/End: Original strand, 1448606 - 1448696
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaac 369  Q
    ||||||||||||||  |||||||| ||| ||||||||| |||| |||||||||||||||| ||||| ||||||||||||||||| ||||||    
T  1448606 gacaaaaacaaaatgatattcattcattcaaatcgagatattatatcattcaacaccgctgaaaacctaaaggatgaatctgcgaacaaac 1448696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 31235574 - 31235664
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||| ||||||| || ||||||||||||| | |||||||||||||||| |||||| || | ||||||||||||||| ||||||    
T  31235574 tattcatttattcaaatcgataggttacatcattcaatatcgctaaaaacgtaaagaatgaatttgtgaacaaactcacagcatccaagtt 31235664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 46339341 - 46339251
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||| || ||| ||||| ||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  46339341 tattctttcattcaaatcaagagattacatcattcaacactgttaaaaacgtaaaggatgaatctgtgaacaaactcacatcatccaagtt 46339251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 299 - 378
Target Start/End: Original strand, 13592304 - 13592382
Alignment:
Q  299 catttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||| ||||||||||| ||| ||||| ||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  13592304 cattcattaaaatcgatagagtacat-attcaacactgctaaaaatgtaaaggatgaatctgcgaacaaactcacagcat 13592382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 6559180 - 6559074
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||| ||||||||| ||||||||||||  ||||||||||||| ||||||| || | ||||||||| |||||    
T  6559180 gacaaaaacaaaatgatattcattcatttaaattgagagattatatcattcaacactactaaaaacgtaaatgatgaatatgtgaacaaactcatagcat 6559081  T
Q  379 tcaagtt 385  Q
     ||||||    
T  6559080 ccaagtt 6559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 32521719 - 32521809
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||  |||||||||||||||||||| ||||| |||||||||||||| || | ||||||||||| ||| ||||||    
T  32521719 tattcattcattcaaatcgatggattacatcattcaacaccgttaaaatcgtaaaggatgaatttgtgaacaaactcacaacatccaagtt 32521809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 48208208 - 48208154
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 362  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  48208208 aaattgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcg 48208154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 295 - 374
Target Start/End: Complemental strand, 35261584 - 35261505
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||| || ||| ||||||||| |||||| |||||||| ||||||||||||||||| |||||||||||    
T  35261584 tattcattcattcaaattgatagagtacatcatttaacaccactaaaaacataaaggatgaatctgcgaacaaactcaca 35261505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 17611678 - 17611588
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| || ||| ||||||||||||||  ||||||||| ||| ||||||||||||| ||||||||||| ||| ||||||    
T  17611678 tattcattcattcaaattgatagagtacatcattcaacattgctaaaaacataagggatgaatctgcgaacaaactcacaacatccaagtt 17611588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 23425147 - 23425253
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||  ||||||||||| |||||||| ||||||||||||||| |||||||||  | ||| ||| |||||||    
T  23425147 gacaaaaacaaaatgatattcattcattcaaattaagagattacattattcaacatcgctaaaaacgtaaatgatgaatctatgaacatactaacagcat 23425246  T
Q  379 tcaagtt 385  Q
     ||||||    
T  23425247 ccaagtt 23425253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 24351239 - 24351182
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| |||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  24351239 tcaacatcgctaaaaacgtaaaggatgaatctgcgaacaaactcatagcatccaagtt 24351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 19404602 - 19404657
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||||| ||||||    
T  19404602 aacatcgctaaaaatgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 19404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 373
Target Start/End: Original strand, 35667009 - 35667100
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 373  Q
    |||||||||||  |||||||| ||| ||||| ||||| || | ||||||||||||||||||||||||| ||||||| || | ||||||||||    
T  35667009 aaaaacaaaatgatattcattcattcaaatcaagagaatataccattcaacaccgctaaaaacgtaaatgatgaatttgtgaacaaactcac 35667100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 396 - 499
Target Start/End: Original strand, 38485873 - 38485975
Alignment:
Q  396 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtc 495  Q
    |||||||||||||||||||| | | | | | |||||||||||||| |||||||||| |||| ||||| ||| ||||||| ||||||| |||||||  |||    
T  38485873 cttatgggtgttgatcgcagagttttttttgttggtgtttgttttcgggtgttccgcctatttacgacgcc-ttagtttatactttctgtaacaccagtc 38485971  T
Q  496 tctg 499  Q
    ||||    
T  38485972 tctg 38485975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 42408593 - 42408534
Alignment:
Q  326 attcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| || |||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  42408593 attcaatacggctaaaaacgtaaaagatgaatctgcgaacaaactcacagcatccaagtt 42408534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 17222818 - 17222880
Alignment:
Q  323 atcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| ||||||||||||||  ||||||||||||||||| ||||||||||| ||| ||||||    
T  17222818 atcatttaacaccgctaaaaatataaaggatgaatctgcgaacaaactcacaacatccaagtt 17222880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 37849126 - 37849036
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| | ||||| |  ||||||||||||||||| |||||| || |||||||  ||||||||||||||| ||||||    
T  37849126 tattcattcattcaaatcgataaattacttatttcaacaccgctaaaaatgtaaagaataaatctgcaaacaaactcacagcatccaagtt 37849036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 8001391 - 8001438
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  8001391 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 8001438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 34899452 - 34899507
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||| ||| ||||||    
T  34899452 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacaacatccaagtt 34899507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 6002314 - 6002224
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| || |||||| |||||||| || |||||||||||| ||| |||||| | | ||||||||| ||| ||||||    
T  6002314 tattcattcattcaaatcgataggttacattattcaacatcgttaaaaacgtaaatgataaatctgtgaataaactcacatcatccaagtt 6002224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 280 - 377
Target Start/End: Original strand, 37837250 - 37837350
Alignment:
Q  280 gacaaaaacaaaatttattcatttattaaaatcgagagattacatca--ttcaa-caccgctaaaaacgtaaaggatgaatctgcggacaaactcacagc 376  Q
    ||||||||||||   |||||||| ||| ||||||| ||| |||||||  | ||| || ||||||||||||||||| ||||| |||| |||||||||||||    
T  37837250 gacaaaaacaaacgatattcattcattcaaatcgatagagtacatcagatacaaacatcgctaaaaacgtaaagggtgaatatgcgaacaaactcacagc 37837349  T
Q  377 a 377  Q
    |    
T  37837350 a 37837350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 40993403 - 40993359
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||| |||||||||||    
T  40993403 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcaca 40993359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 28407763 - 28407818
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| |||||||||| |||||| | |||||||| ||||||||||||||| ||||||    
T  28407763 aacatcgctaaaaacataaagggtaaatctgcgaacaaactcacagcatccaagtt 28407818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 335 - 378
Target Start/End: Complemental strand, 39707671 - 39707628
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  39707671 cgctaaaaatgaaaaggatgaatctgcgaacaaactcacagcat 39707628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 48316657 - 48316704
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| |||||||||| |||||| |||||||||| ||||||||||||||    
T  48316657 aacatcgctaaaaacctaaagggtgaatctgcgaacaaactcacagca 48316704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 370
Target Start/End: Complemental strand, 20083640 - 20083550
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaact 370  Q
    |||||||||||||  |||| ||| ||| ||||||| | | ||||||||| |||| ||||| ||| ||||| |||||||||||| |||||||    
T  20083640 acaaaaacaaaatgatatttattcattcaaatcgatatagtacatcatttaacatcgctacaaatgtaaatgatgaatctgcgaacaaact 20083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 353
Target Start/End: Original strand, 43369564 - 43369622
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggat 353  Q
    |||||||| ||| |||| || |||||||||||||||| | |||| ||||||||||||||    
T  43369564 tattcattcatttaaattgatagattacatcattcaatatcgctgaaaacgtaaaggat 43369622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 499
Target Start/End: Original strand, 9350018 - 9350122
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactgg 493  Q
    |||||||||| |||||| |||||||||||| | |||||| || |||   ||||||||| |||||||||  ||| || |||||||||||  ||||||| |     
T  9350018 tccttatgggggttgattgcaggggtgtctttgttggtgattttttccaggtgttccgcctatatacggcgcc-ttggtttgtactttttgtaacaccga 9350116  T
Q  494 tctctg 499  Q
    ||||||    
T  9350117 tctctg 9350122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 28476466 - 28476417
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||| | |||||||||  |||||||||||||| |||||||    
T  28476466 gctaaaaacgtaaatggtgaatctgcaaacaaactcacagcactcaagtt 28476417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 361
Target Start/End: Complemental strand, 36144006 - 36143965
Alignment:
Q  320 tacatcattcaacaccgctaaaaacgtaaaggatgaatctgc 361  Q
    ||||||||||||||||||||||||| ||||  ||||||||||    
T  36144006 tacatcattcaacaccgctaaaaacataaataatgaatctgc 36143965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 295 - 344
Target Start/End: Original strand, 46818194 - 46818243
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaac 344  Q
    |||||||  ||| ||||||| ||||||||||||||||||||| |||||||    
T  46818194 tattcataaattcaaatcgatagattacatcattcaacaccgttaaaaac 46818243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Complemental strand, 48208147 - 48208098
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||||||||||| | | ||||||| ||| ||||||    
T  48208147 gctaaaaacgtaaaggatgaatctgcgaaaatactcacaacatccaagtt 48208098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 477
Target Start/End: Original strand, 13312173 - 13312225
Alignment:
Q  425 ttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    |||||| |||| |||| |||||||||| |||||||| | ||||||||||||||    
T  13312173 ttttggcgtttattttcgggtgttccgcctatatacaaagcctttagtttgta 13312225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 375
Target Start/End: Original strand, 26610622 - 26610670
Alignment:
Q  327 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    ||||||| || |||||||||||| | |||||||||| ||||||||||||    
T  26610622 ttcaacatcgttaaaaacgtaaaaggtgaatctgcgaacaaactcacag 26610670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 26623634 - 26623678
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| |||| |||||||||||| |||||||||| |||||||||||    
T  26623634 aacatcgcttaaaacgtaaagggtgaatctgcgaacaaactcaca 26623678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 374
Target Start/End: Complemental strand, 42978856 - 42978812
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||||||||||||||||| |||||||||| || ||||||||    
T  42978856 aacatcgctaaaaacgtaaagggtgaatctgcgaacgaactcaca 42978812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 46918784 - 46918744
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||||||  |||||||||||||||| |||||||||||||||    
T  46918784 taaaaacaaaaaggatgaatctgcgaacaaactcacagcat 46918744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 6e-32; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 7343013 - 7342923
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7343013 tattcattcattcaaatcgagagattacatcactcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 7342923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 9686979 - 9687085
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||    
T  9686979 gacaaaaacaaaatgatattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcat 9687078  T
Q  379 tcaagtt 385  Q
     ||||||    
T  9687079 ccaagtt 9687085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 51868435 - 51868525
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||    
T  51868435 tattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatttgcgaacaaactcacagcatccaagtt 51868525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 280 - 374
Target Start/End: Complemental strand, 30879382 - 30879287
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  30879382 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaagaatgaatctgcgaacaaactcaca 30879287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 9172781 - 9172691
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  9172781 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 9172691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 9180763 - 9180673
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  9180763 tattcattcattcaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 9180673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 11454228 - 11454138
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  11454228 tatttattcattcaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 11454138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 19715685 - 19715775
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  19715685 tattcattcatttaaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaataaactcacagcatccaagtt 19715775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 19723604 - 19723514
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| ||||||    
T  19723604 tattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaataaactcacagcatccaagtt 19723514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 25406074 - 25406164
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||    
T  25406074 tattcattcattcaaatcgagatattacatcattcaacaccgctaaaaacgtaaaagatgaatctgcgaacaaactcacagcatccaagtt 25406164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 45805619 - 45805709
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  45805619 tattcattcattcaaatcgagagattacatcattcaacaccgttaaaaacgtaaaggatgaatctgcgaacaaactcacatcatccaagtt 45805709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 50165889 - 50165979
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||    
T  50165889 tattcattcatttaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgtgaacaaactcacaacatccaagtt 50165979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 51872154 - 51872064
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  51872154 tattcattcattcaaattgagagattacatccttcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacagcatccaagtt 51872064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 11709497 - 11709576
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  11709497 tattcattcattcaaatcgagagattacatcattcaacaccactaaaaacgtaaaggatgaatctgcgaacaaactcaca 11709576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 5324333 - 5324438
Alignment:
Q  280 gacaaaaacaaaat-ttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    |||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| || |||||||| |||    
T  5324333 gacaaaaacaaaatgttattcattcatttaaatcgagagattacatcattcaacatcgctaaaaacgtaaagcatgaatctgcgaac-aactcacaacat 5324431  T
Q  379 tcaagtt 385  Q
     ||||||    
T  5324432 ccaagtt 5324438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 20266609 - 20266503
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||| |||    
T  20266609 gacaaaaacaaaatgatattcattcattcaaatcgagagattacattattcaacaccactaaaaacgtaaaggatgaatctgcgaataaactcacaacat 20266510  T
Q  379 tcaagtt 385  Q
     ||||||    
T  20266509 ccaagtt 20266503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 31837141 - 31837035
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||||||| |||||||| |||||||||||| ||    
T  31837141 gacaaaaacaaaatgatattcattcatttaaatcgagagattatatcattcaacaccgctaaaaatgtaaaggataaatctgcgaacaaactcacagtat 31837042  T
Q  379 tcaagtt 385  Q
     ||||||    
T  31837041 ccaagtt 31837035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 385
Target Start/End: Complemental strand, 5701537 - 5701460
Alignment:
Q  308 aaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||    
T  5701537 aaattgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagtt 5701460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 35584398 - 35584502
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| |||||||||||||||||||||||| |||||| |||||||||||||||||| |||| |||||||||||||||     
T  35584398 acaaaaacaaaatgatattcattcattcaaatcgagagattacatcattcaataccgct-aaaacgtaaaggatgaatttgcgaacaaactcacagcatc 35584496  T
Q  380 caagtt 385  Q
    ||||||    
T  35584497 caagtt 35584502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 45425841 - 45425946
Alignment:
Q  280 gacaaaaacaaaatttattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||| |||||||| ||| |||| |||||||||||||||| || | ||||||||||||||| |||||||||||| | |||||||||||||     
T  45425841 gacaaaaacaaaatatattcattcattcaaattgagagattacatcatttaatatcgctaaaaacgtaaatgatgaatctgcgaataaactcacagcatc 45425940  T
Q  380 caagtt 385  Q
    ||||||    
T  45425941 caagtt 45425946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 295 - 383
Target Start/End: Complemental strand, 39987709 - 39987622
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaag 383  Q
    |||||||| ||| |||| || | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39987709 tattcattcattcaaattgataaattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc-gacaaactcacagcattcaag 39987622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 33291208 - 33291298
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||  |||||||||||| |||||||||||  ||||||||||||||| ||||||    
T  33291208 tattcattcatttaaatcgagagattacatcattcaacaccaataaaaacgtaaatgatgaatctgctaacaaactcacagcatccaagtt 33291298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 34519435 - 34519329
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||||||| ||||||||||| ||  |||||||||||||||||||||||||||||| |||||||||||| ||    
T  34519435 gacaaaaacaaaatgatattcattcattcaaatcgagggattacatcatccattaccgctaaaaacgtaaaggatgaatctgcgaacaaactcacaggat 34519336  T
Q  379 tcaagtt 385  Q
     ||||||    
T  34519335 ccaagtt 34519329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Complemental strand, 48217744 - 48217638
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||| ||||| |||||||| ||||||||||||| |||| ||||||||||| |||    
T  48217744 gacaaaaacaaaatgatattcattcattcaaatcgagagattacatcatttaacactgctaaaaatgtaaaggatgaatttgcgaacaaactcacaacat 48217645  T
Q  379 tcaagtt 385  Q
     ||||||    
T  48217644 ccaagtt 48217638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 302 - 385
Target Start/End: Complemental strand, 9919671 - 9919589
Alignment:
Q  302 ttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||    
T  9919671 ttattcaaatcgagagattacatcattcaa-accgctaaaaatgtaaaggataaatctgcgaacaaactcacagcatccaagtt 9919589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 32676925 - 32677015
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||| ||| ||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| ||| ||||||    
T  32676925 tatttattcattcaaatcaagagattacatcattcaacaccactaaaaacgtaaaagatgaatctgcgaacaaactcacatcatccaagtt 32677015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 385
Target Start/End: Original strand, 40880814 - 40880893
Alignment:
Q  306 taaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||| || |||||||||||||||||||||||| |||| ||||||| ||||||||||| ||| ||||||    
T  40880814 taaaatcgagagattatattattcaacaccgctaaaaacgtaaatgatgcatctgcgaacaaactcacaacatccaagtt 40880893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 50271930 - 50272009
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||| ||| ||| ||||||||| |||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||    
T  50271930 tatttattcattcaaatcgagatattacatcattcaacaccgctaaaaaggtaacggatgaatctgcgaacaaactcaca 50272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 28035410 - 28035351
Alignment:
Q  313 gagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  28035410 gagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgc--acaaactcaca 28035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 31130383 - 31130473
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||| || ||||||||||||||| ||||||||| ||||||||||||| || | ||||||||||||||| ||||||    
T  31130383 tattcattcattcaaatcgacaggttacatcattcaacatcgctaaaaatgtaaaggatgaatatgtgaacaaactcacagcatccaagtt 31130473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 38520309 - 38520415
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||| |||| |||||||||||||||| | ||||||||||||||||||||| || | ||||||||||| |||    
T  38520309 gacaaaaacaaaatcatattcattcatttaaattgagaaattacatcattcaacatcactaaaaacgtaaaggatgaatttgtgaacaaactcacaacat 38520408  T
Q  379 tcaagtt 385  Q
     ||||||    
T  38520409 ccaagtt 38520415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 50148661 - 50148571
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||| || ||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||||| |  |||||||| ||| ||||||    
T  50148661 tattctttcattcaaatcgagagattacatcattcaacatcgctaaaaatgtaaaggatgaatctgcgaaacaactcacaacatccaagtt 50148571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 378
Target Start/End: Original strand, 27914881 - 27914977
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||   || |||||||||||||||    
T  27914881 gacaaaaacaaaatgatattcattcattcaaatcaagatattacatcattcaacaccgctaaaaatgtaaaggatgaat---cgaacaaactcacagcat 27914977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 3871698 - 3871609
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||||| ||||  || ||||||||||| ||| ||||||    
T  3871698 tattcattcattcaaatcgagagattacatcattaaacaccgctaaaaacataaaggat-aatcaacgaacaaactcacaacatccaagtt 3871609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 368
Target Start/End: Complemental strand, 40646964 - 40646893
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaa 368  Q
    |||||||| ||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||| |||||    
T  40646964 tattcattcattcaaatcgagagattaa--cattcaacaccgctaaaaacgtaaaggatgaatctgcgaacaaa 40646893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 399 - 496
Target Start/End: Original strand, 11839527 - 11839624
Alignment:
Q  399 atgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtct 496  Q
    ||||||||||||||||||  ||| | | ||||  |||||||||||||||||||  | ||||||| ||||||||||||||||||| ||||||| |||||    
T  11839527 atgggtgttgatcgcaggaatgtatttgttgggatttgtttttgggtgttccgcttttatacgacgcctttagtttgtactttctgtaacacaggtct 11839624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 7998049 - 7997990
Alignment:
Q  326 attcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||    
T  7998049 attcaacaccgctaaaaacgtaaaggatgaatctgcaaacaaactcacatcatccaagtt 7997990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 295 - 358
Target Start/End: Original strand, 30818154 - 30818217
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatc 358  Q
    |||||||| ||| ||||| ||| |||||||||||||||||||||||||| ||||||||||||||    
T  30818154 tattcattaattcaaatcaagaaattacatcattcaacaccgctaaaaatgtaaaggatgaatc 30818217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 280 - 374
Target Start/End: Original strand, 41081478 - 41081573
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||  |||||||| ||| ||||||| ||| ||||||||||||||  ||||||||||||||  ||||||||| | |||||||||||    
T  41081478 gacaaaaacaaaatgatattcattcattcaaatcgatagagtacatcattcaacagtgctaaaaacgtaaaacatgaatctgtgaacaaactcaca 41081573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 44637708 - 44637618
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| |||  |||||| ||| ||||| ||||||||| ||||||| ||||||||||| ||||||| | ||||||||||||| ||||||    
T  44637708 tattcattcattccaatcgatagagtacattattcaacacagctaaaatcgtaaaggatggatctgcgaataaactcacagcatccaagtt 44637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 400 - 487
Target Start/End: Complemental strand, 2987892 - 2987806
Alignment:
Q  400 tgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaa 487  Q
    ||||||||||| |||||||||| | | |||||||||||||| || ||||||| |||||||||  ||| ||||||||||||||| ||||    
T  2987892 tgggtgttgattgcaggggtgtttttgttggtgtttgttttcggatgttccgcctatatacggcgcc-ttagtttgtactttcggtaa 2987806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 396 - 498
Target Start/End: Original strand, 4652095 - 4652196
Alignment:
Q  396 cttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttccgtaacactggtc 495  Q
    |||||||||||||||| ||||| | | | | ||||||||||||||  ||||||||| ||||||||| || | |||||||||||||||  |||||| ||||    
T  4652095 cttatgggtgttgatcacagggttttttttgttggtgtttgttttcaggtgttccgcctatatacggtgtc-ttagtttgtactttctataacaccggtc 4652193  T
Q  496 tct 498  Q
    |||    
T  4652194 tct 4652196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 315 - 385
Target Start/End: Complemental strand, 27873008 - 27872938
Alignment:
Q  315 gagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||| || ||||||  | |||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  27873008 gagattacaccaatcaacaatgttaaaaacgtaaatgatgaatctgcgaacaaactcacaacattcaagtt 27872938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 33816942 - 33817048
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  | |||||| ||| ||||| | | ||| |||||||||| || ||||||||| ||||||||||||| ||| ||||||||||| |||    
T  33816942 gacaaaaacaaaatgatcttcattcattcaaatcaaaatatttcatcattcaatactgctaaaaacataaaggatgaatccgcgaacaaactcacatcat 33817041  T
Q  379 tcaagtt 385  Q
     ||||||    
T  33817042 ccaagtt 33817048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 33876412 - 33876518
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  | |||||| ||| ||||| | | ||| |||||||||| || ||||||||| ||||||||||||| ||| ||||||||||| |||    
T  33876412 gacaaaaacaaaatgatcttcattcattcaaatcaaaatatttcatcattcaatactgctaaaaacataaaggatgaatccgcgaacaaactcacatcat 33876511  T
Q  379 tcaagtt 385  Q
     ||||||    
T  33876512 ccaagtt 33876518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 335 - 377
Target Start/End: Complemental strand, 44543514 - 44543472
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  44543514 cgctaaaaacgtaaaggatgaatctgcgaacaaactcacagca 44543472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 47133152 - 47133095
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||| ||| ||||||    
T  47133152 tcaacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacaacatccaagtt 47133095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 15431517 - 15431565
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagt 384  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| |||||    
T  15431517 gctaaaaacgtaaaggatgaatctgcgaacaaactcacaacatccaagt 15431565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 283 - 374
Target Start/End: Complemental strand, 24583247 - 24583153
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||  |||||||| ||| ||||||| ||| |||||||   |||| | |||||||||||||||||||||||||| | |||||||||||    
T  24583247 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaacgtaaaggatgaatctgtgaacaaactcaca 24583153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 283 - 374
Target Start/End: Complemental strand, 24583443 - 24583349
Alignment:
Q  283 aaaaacaaaatt-tattcatttattaaaatcgagagattacatcat--tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||  |||||||| ||| ||||||| ||| |||||||   |||| | ||||||||| |||||||||||||||||| |||||||||||    
T  24583443 aaaaacaaaatgatattcattcattcaaatcgatagaatacatcagaatcaagatcgctaaaaatgtaaaggatgaatctgcgaacaaactcaca 24583349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 49627155 - 49627116
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  49627155 cgctaaaaacgtaaaggatgaatctgcgaacaaactcaca 49627116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 385
Target Start/End: Complemental strand, 31919231 - 31919181
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||||||||||||||| |||||||| || ||| ||||||    
T  31919231 cgctaaaaacgtaaaggatgaatctgcgaacaaactcgcaacatccaagtt 31919181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 4413361 - 4413309
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaa 382  Q
    |||| |||||||||||||||||||||||||| | ||||| |||||||| ||||    
T  4413361 aacatcgctaaaaacgtaaaggatgaatctgtgaacaaattcacagcactcaa 4413309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 394 - 482
Target Start/End: Original strand, 37582408 - 37582495
Alignment:
Q  394 tccttatgggtgttgatcgcaggggtgtctcttttggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgtactttc 482  Q
    ||||||||| ||||||||| | |||||||| | ||| ||||| |||| |||||||||||| |||||||  | | |||||||||||||||    
T  37582408 tccttatggttgttgatcgtaagggtgtctttgttgatgtttattttcgggtgttccgtcaatatacgtcgtc-ttagtttgtactttc 37582495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 374
Target Start/End: Original strand, 39927377 - 39927424
Alignment:
Q  327 ttcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||| |||||||||| |||||||||||| |||| |||||||||||    
T  39927377 ttcaacatcgctaaaaacataaaggatgaatatgcgaacaaactcaca 39927424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 385
Target Start/End: Original strand, 48365583 - 48365646
Alignment:
Q  322 catcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||| |||| ||||||||| ||| ||| ||| |||| ||||||||||||||| ||||||    
T  48365583 catcattcagcaccactaaaaacgcaaatgattaatatgcgaacaaactcacagcatccaagtt 48365646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 338 - 377
Target Start/End: Original strand, 49504448 - 49504487
Alignment:
Q  338 taaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||||||||| |||||||||| ||||||||||||||    
T  49504448 taaaaacgtaaagggtgaatctgcgaacaaactcacagca 49504487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 377
Target Start/End: Complemental strand, 50730874 - 50730823
Alignment:
Q  326 attcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||||| ||||||||||||||| ||||||| || | ||||||||||||||    
T  50730874 attcaacatcgctaaaaacgtaaatgatgaatatgtgaacaaactcacagca 50730823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 339 - 377
Target Start/End: Original strand, 7836650 - 7836688
Alignment:
Q  339 aaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  7836650 aaaaacataaaggatgaatctgcgaacaaactcacagca 7836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 385
Target Start/End: Original strand, 32678986 - 32679041
Alignment:
Q  328 tcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||| ||| ||||||    
T  32678986 tcaacatcgctaaaaacgta--ggatgaatctgcgaacaaactcacaacatccaagtt 32679041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 385
Target Start/End: Original strand, 36775560 - 36775610
Alignment:
Q  335 cgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    ||||||||||||| ||| |||||||||| ||||||||||| ||| ||||||    
T  36775560 cgctaaaaacgtatagggtgaatctgcgaacaaactcacaacatccaagtt 36775610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 321 - 374
Target Start/End: Complemental strand, 5601021 - 5600968
Alignment:
Q  321 acatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    |||||||||||||  |||||||| |||||  ||||||||||| |||||||||||    
T  5601021 acatcattcaacattgctaaaaatgtaaataatgaatctgcgaacaaactcaca 5600968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 340
Target Start/End: Complemental strand, 14545782 - 14545721
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaa 340  Q
    ||||||||||||||  ||||||||  || |||| ||||||||||||||||||| ||||||||    
T  14545782 gacaaaaacaaaatgatattcattcgttcaaatagagagattacatcattcaataccgctaa 14545721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 374
Target Start/End: Complemental strand, 44915879 - 44915842
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  44915879 ctaaaaacgtaaaggatgaatatgcgaacaaactcaca 44915842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 29738516 - 29738556
Alignment:
Q  337 ctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    ||||||||||||||| |||||||||| || |||||||||||    
T  29738516 ctaaaaacgtaaagggtgaatctgcgaacgaactcacagca 29738556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 429 - 477
Target Start/End: Original strand, 34775212 - 34775260
Alignment:
Q  429 ggtgtttgtttttgggtgttccgtctatatacgatgcctttagtttgta 477  Q
    ||||||| |||| |||||||||| |||||||||  ||||||||||||||    
T  34775212 ggtgtttattttcgggtgttccgcctatatacggcgcctttagtttgta 34775260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 4492 - 4402
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||| ||| ||||||    
T  4492 tattcattcatttaaatcaagagattacatcattcaacaccgctaaaaacgtaagggatgaatctgcaaacaaactcacaacatccaagtt 4402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 59; Significance: 9e-25; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 280 - 385
Target Start/End: Original strand, 16094 - 16200
Alignment:
Q  280 gacaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcat 378  Q
    ||||||||||||||  |||||||| ||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| |||    
T  16094 gacaaaaacaaaatgatattcattcattcaaattgagatattacatcattcaacaccgctaaaaacgtaaaggaagaatcagcgaacaaactcacatcat 16193  T
Q  379 tcaagtt 385  Q
     ||||||    
T  16194 ccaagtt 16200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 295 - 385
Target Start/End: Original strand, 361589 - 361679
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||| ||| ||||||    
T  361589 tattcattcattcatattgagagattacatcattcaacaccgctaaaaacgtaaaggataaatctgcgaacacactcacaacatccaagtt 361679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 281 - 385
Target Start/End: Original strand, 83212 - 83316
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcatt 379  Q
    |||||||||||||  |||||||| ||| ||||| |||||||||||||||||| | ||||||||||||||| |||||||||||| ||||||||||| |||     
T  83212 acaaaaacaaaatgatattcattcattcaaatcaagagattacatcattcaa-atcgctaaaaacgtaaatgatgaatctgcgaacaaactcacaacatc 83310  T
Q  380 caagtt 385  Q
    ||||||    
T  83311 caagtt 83316  T

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Target: scaffold0014 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 281 - 375
Target Start/End: Original strand, 201148 - 201243
Alignment:
Q  281 acaaaaacaaaatt-tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacag 375  Q
    |||||||||||||  |||||||| ||| ||||||| |||||||||||||||||||| ||||||| ||||||||||||| || | ||| ||||||||    
T  201148 acaaaaacaaaatgatattcattcattcaaatcgatagattacatcattcaacaccactaaaaatgtaaaggatgaatttgtgaacatactcacag 201243  T

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Target: scaffold0311 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 295 - 385
Target Start/End: Complemental strand, 8978 - 8888
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||| | |||| ||||||||||||| || | |||||||| ||| || ||||||    
T  8978 tattcattcattcaaatcgagagattacatcattcaacaccgtttaaaatgtaaaggatgaatatgtgaacaaactcgcagtatccaagtt 8888  T

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Target: scaffold0495 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 297 - 385
Target Start/End: Complemental strand, 5686 - 5595
Alignment:
Q  297 ttcatttattaaaatcgagagat---tacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||| ||| ||||||||||||   || |||||||||||||| |||||||||||||||||||| |||| ||||||| |||| || ||||||    
T  5686 ttcattcattcaaatcgagagataattatatcattcaacaccgttaaaaacgtaaaggatgaatttgcgaacaaacttacagtatccaagtt 5595  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 385
Target Start/End: Original strand, 57933 - 57988
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||||||||||||| |||||||| ||||||||||||||| ||||||    
T  57933 aacatcgctaaaaacgtaaaggataaatctgcgaacaaactcacagcatccaagtt 57988  T

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Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 377
Target Start/End: Original strand, 9887 - 9934
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagca 377  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||    
T  9887 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactcacagca 9934  T

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Target: scaffold0445 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 385
Target Start/End: Complemental strand, 1588 - 1533
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||| ||||||||||||||||| |||||||||  ||||||||||| ||| ||||||    
T  1588 aacatcgctaaaaacgtaaagggtgaatctgcaaacaaactcacaacatccaagtt 1533  T

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Target: scaffold0113 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 374
Target Start/End: Original strand, 36480 - 36559
Alignment:
Q  295 tattcatttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcaca 374  Q
    ||||| || ||| |||| || ||| ||| |||||||||| ||||||||||||||| ||||||||  || |||||||||||    
T  36480 tattctttcattcaaattgatagagtacttcattcaacatcgctaaaaacgtaaatgatgaatcaacgaacaaactcaca 36559  T

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Target: scaffold0884 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 330 - 372
Target Start/End: Original strand, 1818 - 1860
Alignment:
Q  330 aacaccgctaaaaacgtaaaggatgaatctgcggacaaactca 372  Q
    |||| ||||||||||||||||| |||||||||| |||||||||    
T  1818 aacatcgctaaaaacgtaaagggtgaatctgcgaacaaactca 1860  T

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Target: scaffold0017 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 32598 - 32647
Alignment:
Q  336 gctaaaaacgtaaaggatgaatctgcggacaaactcacagcattcaagtt 385  Q
    |||||||||||||||| |||||||| | ||||||||||| || |||||||    
T  32598 gctaaaaacgtaaagggtgaatctgggaacaaactcacaacactcaagtt 32647  T

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Target: scaffold0372 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 301 - 373
Target Start/End: Original strand, 9467 - 9539
Alignment:
Q  301 tttattaaaatcgagagattacatcattcaacaccgctaaaaacgtaaaggatgaatctgcggacaaactcac 373  Q
    |||||| |||| || |||||||||||||||| | || |||||| | ||||||||| | |||| ||||||||||    
T  9467 tttattcaaattgatagattacatcattcaagatcgttaaaaatggaaaggatgagtttgcgaacaaactcac 9539  T

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