View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4243_low_7 (Length: 317)
Name: NF4243_low_7
Description: NF4243
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4243_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 28960444 - 28960690
Alignment:
| Q |
1 |
atgatgttgaaaaaatgtcctatggttcttctcctgcaggttcaccacctcaccaaaattttcactactatctttcttctcctattcaccactcccgtga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
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| T |
28960444 |
atgatgttgaaaaaatgtcctatggttcttctcctgcaggttcaccacctcaccaaaattttcactactatctttcttcccctattcaccactctcgtga |
28960543 |
T |
|
| Q |
101 |
atcttctacttctcgttactctgcttccttgaaaaaccctaggatttcttcttcttggaagaagctgaataatagaaatggtggtgatgatcttgatgaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
28960544 |
atcttctacttctcgttactctgcttccttgaaaaaccctaggatttcttcttcttggaagaagctaaataatagaaatggtggtgatgatcttgatgaa |
28960643 |
T |
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| Q |
201 |
gaagatgaggatgatgaaggtgtttatgattctgggaggaatgttag |
247 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28960644 |
gaagatgaggatgatgaaggtgtttatgattctgggaggaatgttag |
28960690 |
T |
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