View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4244_high_4 (Length: 458)
Name: NF4244_high_4
Description: NF4244
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4244_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 22 - 443
Target Start/End: Complemental strand, 3472991 - 3472570
Alignment:
| Q |
22 |
gaagttacacacgtacacatatgcataaaacaccaacgtttgataaccccacaacacaacactctctctcttctcaaaacactaccatccactctacgtt |
121 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |
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| T |
3472991 |
gaagttacacacgtacacatatgcataaaacaccaacgtttgataaccccacaacacaacactctctctcttcccaaaacactacaatccactctacgtt |
3472892 |
T |
|
| Q |
122 |
gcgtaacttcaccaaattcacatgcaaaatcaaactcatcttcatttcatttccatcatcttatacacatttatatttttactctttcttcattttccaa |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3472891 |
gcgtaacttcaccaaattcacatgcaaaatcaaactcatcttcatttcatttttatcatcttatacacatttatatttttactctttcttcattttccaa |
3472792 |
T |
|
| Q |
222 |
cacttacaaaccatgtgctcttcactgtcacatattaaccctaccctctcactctctctttgattcatcactctctcatggttcttactcttcatcatca |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3472791 |
cacttacaaaccatgtgctcttcactgtcacatattaaccctaccctctcactctctctttgattcatcactctctcatggttcttactcttcatcatca |
3472692 |
T |
|
| Q |
322 |
accatgcccaccttctcctctctccctaggtatcatcaatcactctaccaatttcattcttcaatatcatctttcaattgtttcacataattcaaacatt |
421 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3472691 |
accatgcccaccttctcctctctccctaggtatcatcaatcactctaccaatttcattcttcaatatcatctttcaattgtttcacataattcaaacatt |
3472592 |
T |
|
| Q |
422 |
aaattaaaatgcactctctctg |
443 |
Q |
| |
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|||||||||||||||||||||| |
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| T |
3472591 |
aaattaaaatgcactctctctg |
3472570 |
T |
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