View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4246_low_30 (Length: 220)
Name: NF4246_low_30
Description: NF4246
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4246_low_30 |
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Alignment Details
Target: chr3 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 17 - 197
Target Start/End: Original strand, 44882466 - 44882646
Alignment:
| Q |
17 |
cataggtagataatgggagctgacgagattgaagaaatttctgacaatatagaactcattggtggtggtataactgaaagggtacctcagaatggttcat |
116 |
Q |
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| T |
44882466 |
cataggtagataatgggagctgacgagattgaagaaatttctgacaatatagaactcattggtggtggtataactgaaagggtacctcagaatggttcat |
44882565 |
T |
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| Q |
117 |
tgagtggacgtttcaacaaaatggtaagcagaagtaaagttaagataagctcgaaggaacaagatgaagaagaaaatgaat |
197 |
Q |
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| T |
44882566 |
tgagtggacgtttcaacaaaatggtaagcagaagaaaagttaagataagctcgaaggaacaaaatgaagaagaaaatgaat |
44882646 |
T |
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