View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4248_low_13 (Length: 265)
Name: NF4248_low_13
Description: NF4248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4248_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 26147751 - 26147499
Alignment:
| Q |
1 |
caggttcgaaacaatttggaattttttaaatcttggtaaaagttttgaacggctttgggagagaaatggaaaagaaaagtgacaataaataaatgccata |
100 |
Q |
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| T |
26147751 |
caggttcgaaacaatttggaattttttaaatcttggtaaaagtttagaacggctttgggagagaaatggaaaggaaaagtgacaataaataaatgccata |
26147652 |
T |
|
| Q |
101 |
aatgtatgataagcatgataattgtggtatgttcctttaaatattagaaaattctaaacgaagtttctttttgatgtcttttcagtattttatgtaacaa |
200 |
Q |
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|||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
26147651 |
aatgtatgttaagcatgataattgtggtatgttcctttaaataatagaaaattctaaacgaagtttctatttgatgtcttttcagtattttatgtaacaa |
26147552 |
T |
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| Q |
201 |
actctatgctaaaaacaaaaggaaaatatttaaaatcaagctactataatctg |
253 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
26147551 |
actctatgctaaaaacaaaagtaaaatatttaaaatcaagctactataatctg |
26147499 |
T |
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