View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4248_low_16 (Length: 262)
Name: NF4248_low_16
Description: NF4248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4248_low_16 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 39245531 - 39245768
Alignment:
| Q |
11 |
cacagaccttagttttagccagcactataaatt-attgagacatagacaagtgttttgtttttcttgataaaacatagacaagtgttttagcttcatcat |
109 |
Q |
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| T |
39245531 |
cacacaccttagttttagccagcactataaatttattgagacatagacaagtgttttgtttttctttataaaacatagacaagtgttttagcttcatcat |
39245630 |
T |
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| Q |
110 |
tgaaacttaacatctttggaactcatagccaggaaatgaaaaccacgtatagtaaggaaacagtgactgatctgctagatggggagcaccttttcaatgt |
209 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
39245631 |
tgaaacttaacatctttggaactcatagccaggaaatgaaaaccacgtatagtaaggaaacagtgactgttctgctagatggggagcaccttttcaatgt |
39245730 |
T |
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| Q |
210 |
aaaaattaaaaattagctagccacactttgaccttttt |
247 |
Q |
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|||||||||||||||||||| |||||||||||||||| |
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| T |
39245731 |
gaaaattaaaaattagctagctacactttgaccttttt |
39245768 |
T |
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