View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4248_low_4 (Length: 555)

Name: NF4248_low_4
Description: NF4248
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4248_low_4
NF4248_low_4
[»] chr4 (57 HSPs)
chr4 (404-540)||(39912560-39912696)
chr4 (110-325)||(40723220-40723435)
chr4 (208-322)||(38698034-38698148)
chr4 (110-307)||(28590812-28591010)
chr4 (209-323)||(28589776-28589890)
chr4 (110-209)||(56085456-56085555)
chr4 (208-322)||(38695539-38695653)
chr4 (110-283)||(13165531-13165703)
chr4 (148-308)||(53435699-53435859)
chr4 (44-283)||(7707623-7707864)
chr4 (40-183)||(2312319-2312461)
chr4 (110-320)||(53432060-53432270)
chr4 (110-183)||(27850845-27850918)
chr4 (110-185)||(19750202-19750277)
chr4 (110-185)||(19789529-19789604)
chr4 (150-305)||(52963582-52963736)
chr4 (178-322)||(40724820-40724962)
chr4 (119-183)||(11968647-11968711)
chr4 (165-321)||(13533224-13533379)
chr4 (166-305)||(14524815-14524954)
chr4 (110-173)||(7053322-7053385)
chr4 (147-226)||(13166714-13166793)
chr4 (108-187)||(26496215-26496294)
chr4 (110-185)||(44498594-44498669)
chr4 (110-183)||(52240013-52240086)
chr4 (110-166)||(1519962-1520018)
chr4 (112-319)||(34326729-34326933)
chr4 (119-186)||(4871626-4871693)
chr4 (239-305)||(2162622-2162688)
chr4 (108-194)||(36845534-36845620)
chr4 (108-186)||(49896490-49896568)
chr4 (239-292)||(668412-668465)
chr4 (244-305)||(3921173-3921234)
chr4 (253-305)||(1190243-1190295)
chr4 (119-198)||(15449991-15450073)
chr4 (250-292)||(669693-669735)
chr4 (110-180)||(52138701-52138771)
chr4 (110-183)||(1794548-1794621)
chr4 (208-261)||(13531754-13531807)
chr4 (252-321)||(20625554-20625623)
chr4 (121-218)||(22069335-22069432)
chr4 (114-302)||(42810115-42810303)
chr4 (107-198)||(8682753-8682844)
chr4 (250-306)||(20620151-20620207)
chr4 (110-194)||(26629915-26629998)
chr4 (40-99)||(23202068-23202127)
chr4 (253-304)||(40792765-40792816)
chr4 (148-198)||(6348274-6348324)
chr4 (239-321)||(7053177-7053259)
chr4 (267-308)||(11115048-11115089)
chr4 (149-198)||(49342739-49342788)
chr4 (253-305)||(390230-390282)
chr4 (254-306)||(1588141-1588193)
chr4 (239-295)||(1829776-1829832)
chr4 (253-305)||(44501531-44501583)
chr4 (254-306)||(54865117-54865169)
chr4 (125-173)||(56157419-56157467)
[»] chr1 (48 HSPs)
chr1 (1-326)||(46318415-46318741)
chr1 (133-322)||(15746697-15746886)
chr1 (110-320)||(48096940-48097149)
chr1 (107-321)||(46467143-46467356)
chr1 (111-206)||(13147325-13147420)
chr1 (176-322)||(15743272-15743418)
chr1 (110-186)||(9226123-9226199)
chr1 (15-183)||(16964938-16965106)
chr1 (110-304)||(15072698-15072892)
chr1 (110-203)||(5612993-5613085)
chr1 (122-218)||(3617417-3617513)
chr1 (122-306)||(16963846-16964029)
chr1 (110-186)||(52078052-52078128)
chr1 (110-305)||(41873879-41874074)
chr1 (147-301)||(16123304-16123458)
chr1 (218-320)||(42244629-42244731)
chr1 (110-295)||(45584915-45585102)
chr1 (110-187)||(14478397-14478474)
chr1 (189-326)||(46468706-46468843)
chr1 (110-187)||(51445721-51445798)
chr1 (110-205)||(26286525-26286619)
chr1 (119-217)||(35943364-35943463)
chr1 (40-170)||(49801766-49801895)
chr1 (110-194)||(48527658-48527742)
chr1 (108-187)||(6049331-6049410)
chr1 (81-173)||(15232898-15232990)
chr1 (239-305)||(836230-836296)
chr1 (239-305)||(51042379-51042445)
chr1 (147-296)||(14470878-14471027)
chr1 (108-296)||(14477697-14477885)
chr1 (110-217)||(44999370-44999477)
chr1 (40-185)||(26802073-26802219)
chr1 (207-292)||(30535674-30535759)
chr1 (245-305)||(835258-835318)
chr1 (119-284)||(10722293-10722460)
chr1 (110-186)||(18821647-18821723)
chr1 (237-321)||(20064173-20064257)
chr1 (254-302)||(34352008-34352056)
chr1 (155-283)||(49802849-49802976)
chr1 (116-183)||(9485218-9485285)
chr1 (263-306)||(18818988-18819031)
chr1 (237-308)||(20069922-20069993)
chr1 (235-277)||(8027292-8027334)
chr1 (239-305)||(15071355-15071421)
chr1 (147-228)||(23091441-23091523)
chr1 (239-305)||(24499692-24499758)
chr1 (110-171)||(13894760-13894821)
chr1 (267-332)||(49619887-49619952)
[»] chr7 (36 HSPs)
chr7 (119-321)||(46201129-46201330)
chr7 (214-320)||(35105-35211)
chr7 (207-320)||(46202288-46202401)
chr7 (214-322)||(27750-27858)
chr7 (209-326)||(38539663-38539780)
chr7 (181-308)||(25533198-25533325)
chr7 (111-194)||(2414869-2414952)
chr7 (40-170)||(22537708-22537836)
chr7 (110-194)||(35295823-35295907)
chr7 (165-321)||(9662200-9662355)
chr7 (108-187)||(41328350-41328429)
chr7 (40-183)||(32255126-32255268)
chr7 (110-187)||(39981448-39981525)
chr7 (110-183)||(43460730-43460803)
chr7 (122-283)||(22336014-22336176)
chr7 (110-292)||(47060384-47060565)
chr7 (125-186)||(15992267-15992328)
chr7 (110-183)||(40811456-40811529)
chr7 (40-283)||(13564076-13564320)
chr7 (122-206)||(16755983-16756067)
chr7 (110-194)||(44372853-44372937)
chr7 (110-194)||(44381709-44381793)
chr7 (155-296)||(33779040-33779178)
chr7 (108-194)||(43441470-43441556)
chr7 (158-296)||(43459477-43459614)
chr7 (122-183)||(11502340-11502401)
chr7 (147-296)||(40509679-40509828)
chr7 (110-186)||(669297-669372)
chr7 (108-296)||(40508400-40508588)
chr7 (147-217)||(22115109-22115179)
chr7 (239-305)||(32602946-32603012)
chr7 (208-261)||(9660730-9660783)
chr7 (263-305)||(10942313-10942355)
chr7 (254-304)||(32256447-32256497)
chr7 (250-324)||(41328213-41328287)
chr7 (208-305)||(30333298-30333395)
[»] chr2 (37 HSPs)
chr2 (110-320)||(35903506-35903715)
chr2 (165-322)||(34147132-34147289)
chr2 (40-306)||(29219397-29219664)
chr2 (40-306)||(29332696-29332963)
chr2 (207-321)||(35904748-35904862)
chr2 (40-308)||(18616842-18617112)
chr2 (110-322)||(34513461-34513673)
chr2 (165-307)||(2277432-2277574)
chr2 (110-305)||(11547672-11547868)
chr2 (239-322)||(2276277-2276360)
chr2 (205-323)||(34148363-34148481)
chr2 (206-306)||(37956961-37957061)
chr2 (110-317)||(7753435-7753640)
chr2 (112-304)||(11317277-11317470)
chr2 (207-318)||(33995948-33996058)
chr2 (119-297)||(43033103-43033280)
chr2 (110-302)||(17459269-17459463)
chr2 (108-217)||(34467607-34467716)
chr2 (119-307)||(34512825-34513011)
chr2 (234-321)||(35061348-35061434)
chr2 (110-187)||(4920966-4921043)
chr2 (110-183)||(6030377-6030450)
chr2 (148-305)||(11315946-11316102)
chr2 (110-183)||(42641768-42641841)
chr2 (250-322)||(35061267-35061339)
chr2 (108-183)||(32469285-32469360)
chr2 (234-292)||(30749325-30749383)
chr2 (110-308)||(34463978-34464176)
chr2 (110-187)||(28611161-28611237)
chr2 (110-180)||(8320895-8320965)
chr2 (158-296)||(32470532-32470669)
chr2 (132-227)||(43034400-43034496)
chr2 (113-150)||(16290705-16290742)
chr2 (110-198)||(30749233-30749320)
chr2 (253-304)||(28561382-28561433)
chr2 (253-322)||(9474103-9474172)
chr2 (110-151)||(30748646-30748687)
[»] scaffold2071 (1 HSPs)
scaffold2071 (110-320)||(589-799)
[»] chr8 (43 HSPs)
chr8 (122-320)||(38696306-38696504)
chr8 (208-321)||(41743621-41743734)
chr8 (108-307)||(14840805-14841004)
chr8 (128-322)||(42877615-42877808)
chr8 (110-304)||(32798439-32798634)
chr8 (40-209)||(24192500-24192670)
chr8 (109-218)||(10669352-10669461)
chr8 (208-323)||(38697012-38697127)
chr8 (51-218)||(17455147-17455314)
chr8 (166-308)||(45394977-45395119)
chr8 (110-295)||(22551030-22551214)
chr8 (132-304)||(42872120-42872291)
chr8 (110-230)||(42098651-42098772)
chr8 (108-171)||(40437502-40437565)
chr8 (40-183)||(32695112-32695254)
chr8 (110-187)||(9854787-9854864)
chr8 (110-194)||(20180582-20180666)
chr8 (245-321)||(42878859-42878935)
chr8 (182-321)||(45437462-45437601)
chr8 (239-305)||(28418819-28418885)
chr8 (239-305)||(28420211-28420277)
chr8 (110-194)||(31845703-31845786)
chr8 (110-194)||(43202220-43202304)
chr8 (110-173)||(13117540-13117603)
chr8 (245-292)||(45396060-45396107)
chr8 (239-305)||(17702312-17702378)
chr8 (207-308)||(211605-211706)
chr8 (207-308)||(240550-240651)
chr8 (207-308)||(725228-725329)
chr8 (207-308)||(793905-794006)
chr8 (110-282)||(8571524-8571697)
chr8 (166-292)||(28735014-28735142)
chr8 (254-295)||(30787652-30787693)
chr8 (110-183)||(44076269-44076342)
chr8 (110-183)||(45281096-45281169)
chr8 (253-305)||(32797151-32797203)
chr8 (158-198)||(32797260-32797300)
chr8 (207-282)||(4810505-4810580)
chr8 (253-304)||(30786690-30786741)
chr8 (253-304)||(32693844-32693895)
chr8 (128-178)||(42878756-42878806)
chr8 (239-292)||(34504677-34504730)
chr8 (239-296)||(42870835-42870892)
[»] chr5 (37 HSPs)
chr5 (128-322)||(1010291-1010484)
chr5 (128-318)||(8521255-8521444)
chr5 (165-317)||(32757826-32757978)
chr5 (110-295)||(39603876-39604063)
chr5 (40-304)||(22047746-22048014)
chr5 (206-321)||(8523750-8523865)
chr5 (110-194)||(1102742-1102826)
chr5 (110-306)||(22308707-22308903)
chr5 (205-321)||(32759051-32759167)
chr5 (166-320)||(9169584-9169738)
chr5 (108-183)||(27705221-27705296)
chr5 (110-295)||(30859078-30859265)
chr5 (128-320)||(1009182-1009375)
chr5 (214-325)||(26047806-26047917)
chr5 (44-183)||(30910878-30911017)
chr5 (155-217)||(33173913-33173975)
chr5 (155-304)||(30857814-30857962)
chr5 (110-194)||(4127161-4127245)
chr5 (110-179)||(11262532-11262601)
chr5 (254-305)||(34899003-34899054)
chr5 (110-304)||(325094-325287)
chr5 (110-194)||(10735887-10735971)
chr5 (44-99)||(13520640-13520695)
chr5 (252-323)||(23334017-23334088)
chr5 (250-308)||(23325922-23325980)
chr5 (253-326)||(10978330-10978403)
chr5 (239-307)||(11846308-11846376)
chr5 (176-296)||(22049111-22049230)
chr5 (253-305)||(24503197-24503249)
chr5 (253-304)||(24509087-24509138)
chr5 (254-305)||(34894162-34894213)
chr5 (239-321)||(11796566-11796648)
chr5 (110-186)||(9220365-9220444)
chr5 (110-227)||(15548328-15548451)
chr5 (110-142)||(17420494-17420526)
chr5 (40-92)||(36898815-36898867)
chr5 (110-178)||(36898889-36898957)
[»] scaffold0011 (2 HSPs)
scaffold0011 (114-322)||(127429-127637)
scaffold0011 (205-322)||(128594-128711)
[»] scaffold1251 (1 HSPs)
scaffold1251 (165-322)||(1048-1205)
[»] chr3 (45 HSPs)
chr3 (119-317)||(20288141-20288339)
chr3 (40-305)||(3208497-3208763)
chr3 (119-302)||(28909524-28909705)
chr3 (128-322)||(3455550-3455745)
chr3 (110-296)||(42684898-42685084)
chr3 (239-305)||(37735319-37735385)
chr3 (40-170)||(26886421-26886551)
chr3 (110-186)||(10301066-10301142)
chr3 (110-183)||(38242423-38242496)
chr3 (110-194)||(14745108-14745192)
chr3 (40-203)||(34819122-34819288)
chr3 (40-183)||(35371043-35371187)
chr3 (108-187)||(49379833-49379912)
chr3 (122-183)||(10338873-10338934)
chr3 (40-183)||(27841545-27841690)
chr3 (207-308)||(43174711-43174812)
chr3 (110-282)||(53420352-53420525)
chr3 (119-186)||(48083359-48083426)
chr3 (110-185)||(53194520-53194595)
chr3 (113-187)||(13621051-13621125)
chr3 (239-305)||(18442265-18442331)
chr3 (239-305)||(19487339-19487405)
chr3 (40-151)||(41264490-41264601)
chr3 (239-305)||(50809434-50809500)
chr3 (239-305)||(50810871-50810937)
chr3 (239-305)||(50864927-50864993)
chr3 (239-305)||(50866362-50866428)
chr3 (122-183)||(10732048-10732109)
chr3 (119-230)||(20336574-20336685)
chr3 (122-184)||(53614192-53614254)
chr3 (119-228)||(36175353-36175461)
chr3 (267-323)||(20336693-20336749)
chr3 (165-305)||(38240919-38241058)
chr3 (253-304)||(3209982-3210033)
chr3 (244-322)||(43173882-43173960)
chr3 (110-152)||(54110192-54110233)
chr3 (253-302)||(12108034-12108083)
chr3 (110-219)||(20314672-20314781)
chr3 (253-294)||(53194921-53194962)
chr3 (239-284)||(55328342-55328387)
chr3 (239-279)||(5123383-5123423)
chr3 (110-178)||(12107887-12107954)
chr3 (253-305)||(38247527-38247579)
chr3 (253-305)||(40244200-40244252)
chr3 (257-305)||(41544675-41544723)
[»] chr6 (21 HSPs)
chr6 (158-303)||(7310291-7310435)
chr6 (209-308)||(16208534-16208633)
chr6 (15-282)||(29381542-29381810)
chr6 (40-283)||(5187459-5187703)
chr6 (246-325)||(7308491-7308570)
chr6 (15-183)||(17837752-17837920)
chr6 (108-308)||(23392224-23392425)
chr6 (110-183)||(7311632-7311705)
chr6 (110-187)||(11722917-11722994)
chr6 (155-283)||(32506979-32507107)
chr6 (239-305)||(233601-233667)
chr6 (40-170)||(18346588-18346717)
chr6 (253-305)||(232189-232241)
chr6 (253-305)||(6452562-6452614)
chr6 (110-186)||(11967348-11967424)
chr6 (235-307)||(12780538-12780610)
chr6 (235-307)||(12784717-12784789)
chr6 (254-306)||(35037145-35037197)
chr6 (255-304)||(7311777-7311826)
chr6 (117-218)||(15728830-15728931)
chr6 (110-198)||(32505788-32505876)
[»] scaffold0118 (1 HSPs)
scaffold0118 (110-305)||(43481-43678)
[»] scaffold0077 (1 HSPs)
scaffold0077 (110-183)||(54091-54164)
[»] scaffold0031 (2 HSPs)
scaffold0031 (110-304)||(123983-124175)
scaffold0031 (110-183)||(125138-125212)
[»] scaffold0078 (1 HSPs)
scaffold0078 (239-301)||(18829-18891)
[»] scaffold0034 (1 HSPs)
scaffold0034 (110-178)||(108654-108722)
[»] scaffold0019 (1 HSPs)
scaffold0019 (147-306)||(63076-63235)
[»] scaffold0219 (1 HSPs)
scaffold0219 (110-194)||(8099-8182)
[»] scaffold0201 (1 HSPs)
scaffold0201 (110-292)||(21153-21335)
[»] scaffold0013 (1 HSPs)
scaffold0013 (110-307)||(32583-32780)
[»] scaffold0128 (1 HSPs)
scaffold0128 (110-292)||(22014-22188)
[»] scaffold0114 (1 HSPs)
scaffold0114 (250-326)||(38532-38608)


Alignment Details
Target: chr4 (Bit Score: 129; Significance: 2e-66; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 404 - 540
Target Start/End: Original strand, 39912560 - 39912696
Alignment:
Q  404 gtaactgtcacacgacacccaaaacatggttgctttagacattttatcacaaacagtgctttctctccataattaagcggaaaagattctggctatgggt 503  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39912560 gtaactgtcacacgacacccaaaacatgggtgctttagacattttatcacaaacagtgctttctctccataattaagcggaaaagattctggttatgggt 39912659  T
Q  504 ctcacagaaaccattatttccttcctccttgacactg 540  Q
    |||||||||||||||||||||||||||||||||||||    
T  39912660 ctcacagaaaccattatttccttcctccttgacactg 39912696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 110 - 325
Target Start/End: Complemental strand, 40723435 - 40723220
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    ||||||||||| | ||| |||||||||||||||||| |||| || |||| |||||||||||||| |||| |||||||  |||||||||| |||  | |||    
T  40723435 atcaaacgattaacatttaaataattaataggatctatggtagaccactcttaaggttggtccaccatatacatttgaggttaaacttaacag-tatgga 40723337  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactg-aaaattatttaaaggaccaaatg 308  Q
    |||||||||| |||||||| | |  ||| |||| |||||||||||||||||| |||||||||||||||||||| || ||||||| |||  ||||||||||    
T  40723336 tttatttgaccgacggagataaacctaagggaccaaaacatgagttttattagttatgggaccaaaatgaaaattgcaaaattaattaggggaccaaatg 40723237  T
Q  309 ccctcttaagcctatat 325  Q
     ||| ||||||| ||||    
T  40723236 acctattaagccaatat 40723220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 208 - 322
Target Start/End: Original strand, 38698034 - 38698148
Alignment:
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||| || |||||||||||||||||||||    
T  38698034 gatttttttgacagacggagacacagttaaaggaccaaaacatgacttttattagatatgggaccaaaatgaaaattggaaattatttaaaggaccaaat 38698133  T
Q  308 gccctcttaagccta 322  Q
    | ||| |||||||||    
T  38698134 gacctattaagccta 38698148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 110 - 307
Target Start/End: Original strand, 28590812 - 28591010
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcata--gacatttggtgttaaacttaccagccaag 207  Q
    |||||||  |||| |||||||||||||||||||||| || || |||||| |||| |||||| || ||||  ||||||| | |||||| ||| | | |||     
T  28590812 atcaaacagtttatattaaaataattaataggatctatgatgaatcactcttaaagttggttcaccatatagacatttagggttaaatttaacgggcaaa 28590911  T
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
     |||||||||||  ||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||||||||| |||||||||    
T  28590912 -atttatttgaccaacgaagacacaattaaaggaccaaaacatgagttttattatttatgggaccaaaatgaaagctggaaattatttaagggaccaaat 28591010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 209 - 323
Target Start/End: Complemental strand, 28589890 - 28589776
Alignment:
Q  209 atttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    ||||||||||| |||||||||| | |||||| || ||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  28589890 atttatttgaccgacggagacataattaaagtaccaaaacataagttttaatacttatgggaccaaaatgaaaactgaaaattatttaagggatcaaatg 28589791  T
Q  309 ccctcttaagcctat 323  Q
     ||| |||| |||||    
T  28589790 acctattaaacctat 28589776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 56085555 - 56085456
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| |||||||| ||||| ||||||||||||| |||||| ||| ||||||||||    
T  56085555 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccatagacatttggggttaaagttaacagccaagga 56085456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 208 - 322
Target Start/End: Complemental strand, 38695653 - 38695539
Alignment:
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    ||||| ||||| ||||||||| ||||||||||||| ||||||||| ||||||||  ||||||| ||||||||||| |||||||||||||| |||||||||    
T  38695653 gatttttttgatagacggagagacagttaaaggaccaaaacatgatttttattagatatgggatcaaaatgaaaattgaaaattatttaagggaccaaat 38695554  T
Q  308 gccctcttaagccta 322  Q
      ||| |||||||||    
T  38695553 aacctattaagccta 38695539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 110 - 283
Target Start/End: Complemental strand, 13165703 - 13165531
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| ||||||||||||||||||||    ||| ||||||| |||| |||||||||||||| |||||| |||||  |||||||||| ||| ||||||    
T  13165703 atcaaacggtttaaattaaaataattaatgaagtctatggtggaccactcttaaggttggtccaccatagaaatttgaagttaaacttaacagtcaagga 13165604  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaac 283  Q
    ||||||||||| ||||||  | || | |||||| |||||   | |||||||| ||| |||||||||||||||||    
T  13165603 tttatttgacaaacggaggaaaagatgaaggacgaaaacgccatttttattaatta-gggaccaaaatgaaaac 13165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 148 - 308
Target Start/End: Original strand, 53435699 - 53435859
Alignment:
Q  148 ggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaa 247  Q
    |||||| |||| |||||||||||| | |||||||||||   |||||||||| | | ||||||||||||||||  ||||||  | | || | || | ||||    
T  53435699 ggtggaccactcttaaggttggtctaccatagacatttaaagttaaacttaaccgtcaaggatttatttgaccaacggaggtaaacttgaggggccaaaa 53435798  T
Q  248 catgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    |||||||||||||||||||||||||||||||||||||  |||||| |||| ||| ||||||    
T  53435799 catgagttttattacttatgggaccaaaatgaaaacttgaaattaattaagggatcaaatg 53435859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 283
Target Start/End: Complemental strand, 7707864 - 7707623
Alignment:
Q  44 gtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaataggat 143  Q
    |||||||||||||||| ||| ||||| ||||||| | |||||||||||||||||||        | |||||||| || ||||||||||||||||||||||    
T  7707864 gtgttgatggtacatcgtaagataaaatagacctgcctaatccaatggttctcttttaaagaaaaaatcaaacggttgaaattaaaataattaataggat 7707765  T
Q  144 ctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaagg 240  Q
    || ||||||| |||| |||||||||||| | || |||   ||||||||||||||  || | | | |||||||||||| || || |||  | |  | | ||    
T  7707764 ctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtc-aggatttatttggcaaacagaggaaaatgtgatgg 7707666  T
Q  241 actaaaacatgagttttattacttatgggaccaaaatgaaaac 283  Q
    |||||||| | | |||||||| || ||||||||||||||||||    
T  7707665 actaaaacgtcatttttattaattgtgggaccaaaatgaaaac 7707623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 2312319 - 2312461
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||||||| ||||| ||| |||   |||||||||||||||||||        | |||||||  |||||||||||||||||||||    
T  2312319 ttaggtgttggtggtacatcataagataaaataggcctgtctaatccaatggttctctttttaaaaaaa-atcaaacagtttaaattaaaataattaata 2312417  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||| ||||||| |||||||||| |||||||| |||||||||    
T  2312418 ggatctatggtggaccacttttaagattggtccaccatagacat 2312461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 110 - 320
Target Start/End: Complemental strand, 53432270 - 53432060
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| || ||||| ||| |||||||| | | | |||||   |||| |||| |||||| || ||||||||||||| |||||||||| | | || |||    
T  53432270 atcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccatagacatttggggttaaacttaaccgtcaggga 53432171  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgc 309  Q
    ||||||||||  ||| || || | || | |||| ||||||| |||||||||||||||||||||||||||||||||  |||||| |||| ||| |||| |     
T  53432170 tttatttgaccaacgaaggcaaacttgagggaccaaaacataagttttattacttatgggaccaaaatgaaaacttgaaattaattaagggatcaaacga 53432071  T
Q  310 cctcttaagcc 320  Q
    ||| |||||||    
T  53432070 cctattaagcc 53432060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 27850845 - 27850918
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  27850845 atcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacat 27850918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 19750202 - 19750277
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacattt 185  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||||| || ||||| |||||||||||    
T  19750202 atcaaacgatttaaattaaaataattaataggatctatggtggacaacttttaagatttgtccaccatagacattt 19750277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 19789604 - 19789529
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacattt 185  Q
    |||||||||||||||||||||||||||||||||||| |||||||  ||||||||| || ||||| |||||||||||    
T  19789604 atcaaacgatttaaattaaaataattaataggatctatggtggacaacttttaagatttgtccaccatagacattt 19789529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 52963736 - 52963582
Alignment:
Q  150 tggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaaca 249  Q
    |||| ||||||||||| ||||||| ||||||||||||| |||||| ||| ||| | || |||||||||||| ||||||| | | || | |||| ||||||    
T  52963736 tggaccacttttaaggctggtccaccatagacatttggagttaaagttaacagtcgag-atttatttgacaaacggagaaaaacttgagggaccaaaaca 52963638  T
Q  250 tgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |  | ||||||| || || ||||||||||||||||  |||||||||| ||||||||    
T  52963637 tacgatttattaattgtgagaccaaaatgaaaacttgaaattatttagaggaccaa 52963582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 178 - 322
Target Start/End: Original strand, 40724820 - 40724962
Alignment:
Q  178 agacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaat 277  Q
    ||||||||||  ||||||||| |   || |||||||||||||  ||||||||| | |||| |||| |||||||||||||||||| |  ||||| ||||||    
T  40724820 agacatttgggattaaacttaaccatcatggatttatttgactaacggagacaaacttaagggaccaaaacatgagttttattagt--tgggatcaaaat 40724917  T
Q  278 gaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
     ||||||| |||||| |||| |||||||||| ||| |||||||||    
T  40724918 aaaaactgcaaattaattaagggaccaaatgacctattaagccta 40724962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 11968711 - 11968647
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    ||||||||||||||||||||||||||| || |||| |||| ||||||||||||||||||||||||    
T  11968711 tttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcatagacat 11968647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 13533224 - 13533379
Alignment:
Q  165 gttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactt 264  Q
    ||||||||| ||||||||||||  |||||| ||| ||| |  ||||||||||||| |||||||||| |  | | |||| |||||||||||||| ||| ||    
T  13533224 gttggtccaccatagacatttgaagttaaatttaacagtct-ggatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagtt 13533322  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||| || || |||||||||  |||||| ||| ||||||||||| ||| ||||||||    
T  13533323 atggaactaagatgaaaacttgaaattaattagaggaccaaatgacctattaagcct 13533379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 166 - 305
Target Start/End: Original strand, 14524815 - 14524954
Alignment:
Q  166 ttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactta 265  Q
    |||||||||||||||||||||| |||||||||| |||  | |||||| |||| || ||||||  | |  |||  |||||||||||||||||||||| |||    
T  14524815 ttggtccatcatagacatttggggttaaacttaacagttagggatttttttg-caaacggagggaaaagtaagagactaaaacatgagttttattaatta 14524913  T
Q  266 tgggaccaaaatg-aaaactgaaaattatttaaaggaccaa 305  Q
    ||||| ||||||| ||||||  |||||| ||||||||||||    
T  14524914 tgggatcaaaatgaaaaacttgaaattaattaaaggaccaa 14524954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 7053385 - 7053322
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtcca 173  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||    
T  7053385 atcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattggtcca 7053322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 147 - 226
Target Start/End: Original strand, 13166714 - 13166793
Alignment:
Q  147 tggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacgga 226  Q
    |||||||||||| ||| |||||||||||||||||||||||  |||||||||| ||| |||||||||||||| || |||||    
T  13166714 tggtggatcactcttacggttggtccatcatagacatttgaagttaaacttaacagtcaaggatttatttggcaaacgga 13166793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 26496215 - 26496294
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||| || |||||| || |||||| |||||||||||||    
T  26496215 atatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacatttgg 26496294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 44498669 - 44498594
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacattt 185  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||| |||| ||||||||| |||| |||||||||||    
T  44498669 atcaaacggttttaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacattt 44498594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 52240086 - 52240013
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| ||||||||||||  ||||||||||||| ||||||| |||| |||||||||||||| |||||||||    
T  52240086 atcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacat 52240013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 1520018 - 1519962
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggt 166  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  1520018 atcaaacggtttaaattaaaataattaataggatctatggtggatcactttaaaggt 1519962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 319
Target Start/End: Complemental strand, 34326933 - 34326729
Alignment:
Q  112 caaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatt 211  Q
    ||||||||| ||||| |||||||||||||||||| | || || |||| |||| ||||||||| |||  | ||||||  ||||| ||| ||||   |||||    
T  34326933 caaacgattaaaatttaaataattaataggatctatagtagaccactcttaaagttggtccaccatgtatatttgggattaaatttaacagc--gggatt 34326836  T
Q  212 tatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccc 311  Q
    |||||||| |||  ||||| |  ||| |||| ||||||| |||||||||| ||||||||  || ||||||| | ||||||| |||  |||||||||| ||    
T  34326835 tatttgaccgacaaagacaaacctaagggaccaaaacataagttttatta-ttatgggattaagatgaaaattaaaaattaattaggggaccaaatgacc 34326737  T
Q  312 tcttaagc 319  Q
    | ||||||    
T  34326736 tattaagc 34326729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 4871693 - 4871626
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    |||||||||||||||||||||||||||  |||||| |||| || ||||||||||| ||||||||||||    
T  4871693 tttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccatagacatttg 4871626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 2162688 - 2162622
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||| |||| ||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||||    
T  2162688 ggaccaaaatatgagttttattagttatgggactaaaatgaaaactgaaaattaattagaggaccaa 2162622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 36845620 - 36845534
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||||  |||| ||||||||||||||||||| || ||||||| |||| |||| ||||||| |||||| |||||| | ||||||    
T  36845620 atatcaaacagtttacattaaaataattaataggacctatggtggaccactcttaatgttggtctatcataaacatttagggttaaa 36845534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 49896490 - 49896568
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    |||||||||| ||||||||||||||||||| |||||||   ||||| |||| || ||||||||||| ||||| ||||||    
T  49896490 atatcaaacggtttaaattaaaataattaacaggatctacagtggaccactctttaggttggtccaccatagccatttg 49896568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 668465 - 668412
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  668465 ggaccaaaacgtgagttttattagttatgagaccaaaatgaaaactgaaaatta 668412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 305
Target Start/End: Original strand, 3921173 - 3921234
Alignment:
Q  244 aaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||| || ||||||||| ||||| |||||||||||||||||||||||| |||| |||||||    
T  3921173 aaaacttgggttttattatttatgagaccaaaatgaaaactgaaaattaattaagggaccaa 3921234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 1190243 - 1190295
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||| |||||||||||||||||||||| |||||||||| | |||||||    
T  1190243 gttttattaattatgggaccaaaatgaaaacttaaaattatttgagggaccaa 1190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 198
Target Start/End: Original strand, 15449991 - 15450073
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatag---acatttggtgttaaactta 198  Q
    ||||||||||||  ||||||||||||| ||||||| |||| ||||||||||||||  ||||   |||||||| ||||||||||    
T  15449991 tttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaactta 15450073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 292
Target Start/End: Original strand, 669693 - 669735
Alignment:
Q  250 tgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||||||||||| |||||||||||||||||||| |||||||||    
T  669693 tgagttttattaattatgggaccaaaatgaaaattgaaaatta 669735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Original strand, 52138701 - 52138771
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga 180  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| || | |||| ||||||| | ||||||    
T  52138701 atcaaacggtttaaattagaataattaataggatctatggtggaccattcttaaagttggtctaccataga 52138771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 1794621 - 1794548
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| |||||||||||| | |||||| | ||| ||||||| |||| |||||||||||||| |||| ||||    
T  1794621 atcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccatatacat 1794548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 13531807 - 13531754
Alignment:
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttatta 261  Q
    ||||| |||||| |||||||| ||| ||||||||| ||||||||||||||||||    
T  13531807 gatttttttgaccgacggagagacaattaaaggaccaaaacatgagttttatta 13531754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 252 - 321
Target Start/End: Original strand, 20625554 - 20625623
Alignment:
Q  252 agttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||||||  |||||||||||||||||| ||||| | ||||||||| ||||||||||| ||  ||||||||    
T  20625554 agttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagcct 20625623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 22069432 - 22069335
Alignment:
Q  121 taaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    ||||||||||  ||||||||  ||| ||||| | ||||||||||||| ||||| ||||||||||||  |||||| ||| || |||  |||||||||||    
T  22069432 taaattaaaaatattaatagagtctatggtgaaccacttttaaggttcgtccaccatagacatttgaagttaaagttaacaaccattgatttatttga 22069335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 114 - 302
Target Start/End: Original strand, 42810115 - 42810303
Alignment:
Q  114 aacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat-ttggtgttaaacttaccagccaaggattt 212  Q
    |||| |||||||||||| | |||||| | ||| |||||||  ||| ||||| ||||| || ||||||||| | || |||||||||| || ||||||||||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatctgggggttaaacttaaca-ccaaggattt 42810213  T
Q  213 atttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggac 302  Q
    ||||| || ||||||  | |  | | ||||| |||  |  ||||||||| || ||||||||||||||||| |  ||||||||||| ||||    
T  42810214 atttggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaagttgaaattatttaagggac 42810303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 198
Target Start/End: Original strand, 8682753 - 8682844
Alignment:
Q  107 tatatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttg-gtccatcatagacatttggtgttaaactta 198  Q
    ||||||||| | || ||||||||| |||||||| ||||| || |||| |||| ||||| ||  ||||| ||||||||||||||||||||||||    
T  8682753 tatatcaaagggttgaaattaaaa-aattaatatgatctatgatggaccactcttaagatttagtccaccatagacatttggtgttaaactta 8682844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 250 - 306
Target Start/End: Complemental strand, 20620207 - 20620151
Alignment:
Q  250 tgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||||  |||||||||||||||||| ||||| | ||||||||| |||||||||    
T  20620207 tgagttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaa 20620151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 26629998 - 26629915
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||  |||| ||||||||||||||||||| || ||||||| |||| |||| |||||| || |||| |||||||| ||||||    
T  26629998 atcaaacagtttacattaaaataattaataggacctatggtggaccactcttaa-gttggttcaccataaacatttggggttaaa 26629915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 23202127 - 23202068
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctcttt 99  Q
    |||||||||| ||||||||| ||| ||||| ||||||| | |||| ||||||||||||||    
T  23202127 ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctcttt 23202068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 40792816 - 40792765
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||| || ||||||||||||||||||| ||||||| ||| |||||||    
T  40792816 gttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggacca 40792765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 148 - 198
Target Start/End: Complemental strand, 6348324 - 6348274
Alignment:
Q  148 ggtggatcacttttaaggttggtccatcatagacatttggtgttaaactta 198  Q
    |||||| |||| |||||||||||||| ||||||||||||  ||||||||||    
T  6348324 ggtggaccactcttaaggttggtccaccatagacatttgaggttaaactta 6348274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 7053259 - 7053177
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||| |||| || |||||||||| |||||| ||||||||| ||||||||||||| |||  |||  ||||| ||| ||||||||    
T  7053259 ggacaaaaatataagttttattaattatggaaccaaaatgtaaactgaaaattaattaggggaaaaaatgacctattaagcct 7053177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 11115048 - 11115089
Alignment:
Q  267 gggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    |||||||||||||||||||||||| | |||| ||||||||||    
T  11115048 gggaccaaaatgaaaactgaaaataagttaagggaccaaatg 11115089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 49342788 - 49342739
Alignment:
Q  149 gtggatcacttttaaggttggtccatcatagacatttggtgttaaactta 198  Q
    ||||| |||||||||||||||||||  |||||| ||||| ||||||||||    
T  49342788 gtggaccacttttaaggttggtccactatagacgtttggggttaaactta 49342739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 390282 - 390230
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||| || |||||||||||||||||||  ||||||||||  |||||||    
T  390282 gttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaa 390230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 1588141 - 1588193
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||| || |||||| |||||||||||| |||||||||| | ||||||||    
T  1588141 ttttattaattgtgggactaaaatgaaaacttaaaattatttgagggaccaaa 1588193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 1829832 - 1829776
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattt 295  Q
    ||||||||| ||  ||||||||| || |||||||||||||||||||  |||||||||    
T  1829832 ggactaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattattt 1829776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 44501583 - 44501531
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||| ||||||||||| ||||||||||  ||||||||| | |||||||    
T  44501583 gttttattaattatgggaccagaatgaaaacttgaaattatttgagggaccaa 44501531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 54865169 - 54865117
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||| |||||||||||||||||||||  |||||||  ||| ||||||||    
T  54865169 ttttattaattatgggaccaaaatgaaaacataaaattaaataagggaccaaa 54865117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 56157419 - 56157467
Alignment:
Q  125 ttaaaataattaataggatctgtggtggatcacttttaaggttggtcca 173  Q
    |||||| |||||||||||||| ||||||| |||| ||||| ||||||||    
T  56157419 ttaaaaaaattaataggatctatggtggaacactcttaagattggtcca 56157467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 4e-58; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 46318415 - 46318741
Alignment:
Q  1 aagaagttgagggg-agaa-gatgaagaaaaggnnnnnnnnttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctt 98  Q
    |||||||||||||| |||| |||||||||||||        |||||||||| ||||||||||||| ||||| ||||| |   ||||| ||||||||| ||    
T  46318415 aagaagttgagggggagaacgatgaagaaaaggaaaaaaagttaggtgttgctggtacatcataagataaaatagacatgtataatctaatggttctttt 46318514  T
Q  99 tnnnnnnntatatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaactta 198  Q
             | ||||||||||||||||||||||| |||||||||||| ||||||| |||| | || ||   |||||||||||||||||| ||||||||||    
T  46318515 aaaaaaaaaagatcaaacgatttaaattaaaatatttaataggatctatggtggaccactctaaaagtaa-tccatcatagacatttggggttaaactta 46318613  T
Q  199 ccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaa 298  Q
     ||||||||||||||||||||||||||||| ||| || | |||| ||||||||| |||||||| ||||||||| ||||| ||||||  |||||| |||||    
T  46318614 acagccaaggatttatttgacagacggagatacaattgagggaccaaaacatgacttttattagttatgggacaaaaatcaaaacttgaaattaattaaa 46318713  T
Q  299 ggaccaaatgccctcttaagcctatatt 326  Q
    |||||||||| ||| |||||||||||||    
T  46318714 ggaccaaatgacctattaagcctatatt 46318741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 133 - 322
Target Start/End: Original strand, 15746697 - 15746886
Alignment:
Q  133 attaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacaca 232  Q
    ||||||||||||| ||||||| |||| ||||| |||||||| ||||||||||||  |||||||||| |||   | |||||||||||| |||||||| |||    
T  15746697 attaataggatctatggtggaccactcttaagattggtccaccatagacatttgaagttaaacttaacagtggatgatttatttgactgacggagataca 15746796  T
Q  233 gttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
     |||| |||| ||||||||||||||||||||||||||||||||||||||| || |||||| |||  |||||||||| ||| |||||||||    
T  15746797 attaagggaccaaaacatgagttttattacttatgggaccaaaatgaaaattggaaattaattaggggaccaaatgacctattaagccta 15746886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 110 - 320
Target Start/End: Original strand, 48096940 - 48097149
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    ||||||||||| | ||| |||||||||||||||||| |||| || |||| |||||||||||||| |||| |||||||  |||||||||| |||  | |||    
T  48096940 atcaaacgattaatatttaaataattaataggatctatggtagaccactcttaaggttggtccaccatatacatttgaggttaaacttaacagt-aggga 48097038  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgc 309  Q
    |||||||||| |||||||||| |  ||| ||||||||||||||||||||||| ||||||||||||||| |||| || |||||| ||| ||||| |||||     
T  48097039 tttatttgaccgacggagacaaacctaagggactaaaacatgagttttattagttatgggaccaaaataaaaattggaaattaattagaggactaaatga 48097138  T
Q  310 cctcttaagcc 320  Q
    ||| |||||||    
T  48097139 cctattaagcc 48097149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 107 - 321
Target Start/End: Complemental strand, 46467356 - 46467143
Alignment:
Q  107 tatatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaa 206  Q
    ||||||||||| |||||||||||| | ||||||  ||||  |||||||||||||||| ||||||||| |||||||||||   |||||||||| |||| |     
T  46467356 tatatcaaacggtttaaattaaaa-atttaataacatctacggtggatcacttttaatgttggtccaccatagacatttatggttaaacttaacagcgag 46467258  T
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||||||||| |||||| || |  | | ||||  ||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||| |||     
T  46467257 ggatttatttgacaaacggaggcaaacctgagggaccgaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaaaggatcaat 46467158  T
Q  307 tgccctcttaagcct 321  Q
    || ||| ||||||||    
T  46467157 tgacctattaagcct 46467143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 111 - 206
Target Start/End: Original strand, 13147325 - 13147420
Alignment:
Q  111 tcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaa 206  Q
    |||||| |||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| |||||||||||||  ||||| |||| ||||||    
T  13147325 tcaaacaatttaaattaaaataattaataggatctatggtggaccactattaaggttggtccaccatagacatttgggattaaagttacaagccaa 13147420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 176 - 322
Target Start/End: Complemental strand, 15743418 - 15743272
Alignment:
Q  176 atagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaa 275  Q
    |||||||||||  |||||||||| | |  ||||||||||||||| || ||||| ||| | || |||| |||||||||||||||||||||||| |||||||    
T  15743418 atagacatttgaagttaaacttaacggggaaggatttatttgactgatggagatacaatcaagggaccaaaacatgagttttattacttatgagaccaaa 15743319  T
Q  276 atgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    || |||| || |||||| ||| ||||||||||  ||| |||||||||    
T  15743318 ataaaaattggaaattaattagaggaccaaataacctattaagccta 15743272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 9226123 - 9226199
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    ||||||| |||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||    
T  9226123 atcaaacaatttaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatagacatttg 9226199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 16964938 - 16965106
Alignment:
Q  15 agaagatgaagaaaaggnnnnnnnnttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaa 114  Q
    |||||||||||||||||        |||||||||| ||||||||| ||| ||||| ||||||| |||||| ||||||||||||||        | | |||    
T  16964938 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaatataaaatagacctgcgtaatacaatggttctcttttaaaagaaaaaacaa 16965037  T
Q  115 acgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    ||| || |||||||||||||||||||||||| ||||||| |||| |||| ||||||||| |||| ||||    
T  16965038 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 16965106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 304
Target Start/End: Original strand, 15072698 - 15072892
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    ||||||| ||||||||||| | |||||||||  |||  |||||| |||| || ||||||||||| ||||||||||||  |||||| ||| ||| || |||    
T  15072698 atcaaacaatttaaattaagaaaattaatagagtctacggtggaccactctttaggttggtccaccatagacatttgaggttaaagttaacagacatgga 15072797  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |||||||| || ||||||  | |  ||| |||| ||||  |  ||||||||| || |||||||||||||||||||  |||||| ||| |||||||    
T  15072798 tttatttggcaaacggaggaaaaaataagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattagaggacca 15072892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 5612993 - 5613085
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagc 203  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| || |||| |||| |||||||| |||||| ||| ||||    
T  5612993 atcaaacggtttaaattaaaataattaataggatctatggtggatcactttaaagg-tgatccaccataaacatttggggttaaagttaacagc 5613085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 218
Target Start/End: Original strand, 3617417 - 3617513
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    |||||||||||||||||||||||| | ||||| |||| ||||||||||| || ||||||||||||  |||||| ||| |||||||||| || |||||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccatagacatttgaggttaaagttaacagccaaggacttttttga 3617513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 122 - 306
Target Start/End: Complemental strand, 16964029 - 16963846
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacag 221  Q
    ||||||| | |||||||| | ||| || |||| |||||||||||||||||||||||| |||||| | |||||| ||| ||| | || ||||||||| ||     
T  16964029 aaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaacatttagagttaaagttaacagtc-agcatttatttggcaa 16963931  T
Q  222 acggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    ||||||  | || | | |||||||||||  | |||||||| || ||||||||||||||||||   |||||| ||||| |||||||    
T  16963930 acggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaattaattaaaagaccaaa 16963846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 52078052 - 52078128
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    |||||||| || |||||||||||||||||||||||| ||||| |||||| ||||||||||| || ||||||||||||    
T  52078052 atcaaacggttaaaattaaaataattaataggatctatggtgtatcactcttaaggttggttcaccatagacatttg 52078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 110 - 305
Target Start/End: Original strand, 41873879 - 41874074
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| || ||||| ||| |||||||    ||| ||||||| |||| |||||||||||||| ||||||||||||  |||||||||| || |||||||    
T  41873879 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccatagacatttgtggttaaacttaacaaccaagga 41873978  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||  | ||||||  | || |||||| | |||| ||   |||||||| ||||| |||||| ||||||| || |||||| || | |||||||    
T  41873979 tttatttggtaaacggaggaaaagctaaagggccaaaagatactttttattaattatgagaccaagatgaaaaatggaaattaattgagggaccaa 41874074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 301
Target Start/End: Complemental strand, 16123458 - 16123304
Alignment:
Q  147 tggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaa 246  Q
    ||||||||||||||||| ||||||| | ||||||||||||   ||||||||| || ||| ||||||||||| || |||||   | |  | | ||||||||    
T  16123458 tggtggatcacttttaaagttggtctaccatagacatttgagattaaacttaacaaccagggatttatttggcaaacggaagaaaaaatgagggactaaa 16123359  T
Q  247 acatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaagga 301  Q
    || ||| |||||||| || ||| |||||||||||||||  |||||||||| ||||    
T  16123358 acgtgaattttattaattgtggaaccaaaatgaaaactttaaattatttagagga 16123304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 320
Target Start/End: Complemental strand, 42244731 - 42244629
Alignment:
Q  218 acagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaa 317  Q
    |||||||||||   | |||| |||| |||||||||||||||||| |||||||| ||||||||||| |  |||||| ||||||||||||||| ||| ||||    
T  42244731 acagacggagatcaacttaagggaccaaaacatgagttttattaattatgggatcaaaatgaaaatttgaaattaattaaaggaccaaatgacctattaa 42244632  T
Q  318 gcc 320  Q
    |||    
T  42244631 gcc 42244629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 295
Target Start/End: Original strand, 45584915 - 45585102
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaa 206  Q
    ||||||||||||| |||||||||||||||||||||| ||||||| |||| |||| ||||| ||| ||||||   |||||||  ||||||||| | | | |    
T  45584915 atcaaacgatttatattaaaataattaataggatctatggtggagcactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtc-a 45585013  T
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattt 295  Q
    ||||||||||| || ||||||  | |  | |||||| ||||  |  ||||||||| || || ||||||||||||||||  |||||||||    
T  45585014 ggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaacttgaaattattt 45585102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 14478474 - 14478397
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| || |||||| || |||||| |||||||||||||    
T  14478474 atcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacatttgg 14478397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 189 - 326
Target Start/End: Original strand, 46468706 - 46468843
Alignment:
Q  189 gttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaa 288  Q
    |||||||||| ||||   |||||||||||||| || ||| || | || | ||||  ||||||||||||||||| ||||||||||||||| |||| |  ||    
T  46468706 gttaaacttatcagcgtgggatttatttgacaaacagaggcaaacttgatggaccgaaacatgagttttattagttatgggaccaaaataaaaatttgaa 46468805  T
Q  289 attatttaaaggaccaaatgccctcttaagcctatatt 326  Q
    |||| |||||| |||||||| ||| |||||| ||||||    
T  46468806 attaattaaagaaccaaatgacctattaagcttatatt 46468843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 51445798 - 51445721
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| || |||||| |||| |||| |||||||||||||    
T  51445798 atcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgatccaccatagacatttgg 51445721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 110 - 205
Target Start/End: Complemental strand, 26286619 - 26286525
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagcca 205  Q
    |||||||| ||||||||||||||||||||||  ||| |||||||||||||| |||| || |||| |||| |||||||| |||||| ||| ||||||    
T  26286619 atcaaacggtttaaattaaaataattaatagagtctatggtggatcactttaaagg-tgatccaccataaacatttggggttaaagttaacagcca 26286525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 35943364 - 35943463
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagcca-aggatttatttg 217  Q
    |||||| ||||| | |||||| | ||| |||||||||||| |||||||||||||| ||||||||||| | |||||||||| ||||||  |||||||||||    
T  35943364 tttaaaataaaaaatttaataaggtctatggtggatcactcttaaggttggtccaccatagacatttagggttaaacttaacagccaggggatttatttg 35943463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 49801895 - 49801766
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||| ||||| ||||||||| ||| ||||| ||||||| | | |||||||||||| ||||        | |||||||| |||||||||||||||||||||    
T  49801895 ttagatgttggtggtacatcgtaagataaaatagacctgcatgatccaatggttccctttaacaaaaaa-atcaaacggtttaaattaaaataattaata 49801797  T
Q  140 ggatctgtggtggatcacttttaaggttggt 170  Q
    | || | ||||||| ||||||||||||||||    
T  49801796 gaatttatggtggaccacttttaaggttggt 49801766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 48527742 - 48527658
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||  ||||||||||||||||| ||| ||||| ||||||| |||| |||| ||||||| | ||||||||||||| ||||||    
T  48527742 atcaaacagtttaaattaaaataattgataagatctatggtggaccactcttaaagttggtcgaccatagacatttggagttaaa 48527658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 187
Target Start/End: Original strand, 6049331 - 6049410
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    ||||||| || ||||||||||||||||||| |||||||  |||||| |||| || || |||||||| |||||||||||||    
T  6049331 atatcaatcggtttaaattaaaataattaacaggatctacggtggaccactatttagattggtccaccatagacatttgg 6049410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 173
Target Start/End: Complemental strand, 15232990 - 15232898
Alignment:
Q  81 taatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtcca 173  Q
    |||||||||||||||||||        |||||||||| || | |||||||||||||||||||||| || |||| ||||||||| |||||||||    
T  15232990 taatccaatggttctcttttaaaaaaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtcca 15232898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 836230 - 836296
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||| |||||||  |||||||| ||||| |||||||||||||||||||||||| ||| ||||||||    
T  836230 ggactgaaacatggattttattagttatgagaccaaaatgaaaactgaaaattaattagaggaccaa 836296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 51042379 - 51042445
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| |||||||||||| || ||||||||||||||||| || |||||| |||| |||||||    
T  51042379 ggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaattaagggaccaa 51042445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 296
Target Start/End: Complemental strand, 14471027 - 14470878
Alignment:
Q  147 tggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaa 246  Q
    ||||||| |||| ||||||||||||||  |||||| ||||| |||||||||| || | ||||||||||||| || ||| ||  | |  | | ||||| ||    
T  14471027 tggtggaccactcttaaggttggtccactatagacgtttggggttaaacttaacaccgaaggatttatttggcaaacgaaggaaaaagtgagggacttaa 14470928  T
Q  247 acatgagttttattacttatgggaccaaaatgaaaactgaaaattattta 296  Q
     | |  ||||||||| || |||||||||||||||||||  ||||||||||    
T  14470927 ccgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattta 14470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 296
Target Start/End: Original strand, 14477697 - 14477885
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaag 207  Q
    |||||||||| || ||||| ||| |||||||    ||| |||||||  ||| ||||| ||| || | ||||||||||| | |||||||||| || | |||    
T  14477697 atatcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatctaccatagacatttagagttaaacttaacatcgaag 14477796  T
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    |||||||||| || ||||||| | |  | | ||||| |||| |  ||||||||| || ||||| |||| |||||||| |||||||||||    
T  14477797 gatttatttggcaaacggagaaaaaagtgagggacttaaacgtacgttttattaattgtgggatcaaagtgaaaacttaaaattattta 14477885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 44999370 - 44999477
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||| | ||||| ||||||||||||||| ||||| ||||| | |||| ||| | |||||||| |||||||||||   |||||| ||| |||| | |||    
T  44999370 atcaaatggtttaagttaaaataattaataagatctatggtgaaccactcttacgattggtccaccatagacatttaaggttaaagttaacagctaggga 44999469  T
Q  210 tttatttg 217  Q
    ||||||||    
T  44999470 tttatttg 44999477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 26802219 - 26802073
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntata-tcaaacgatttaaattaaaataattaat 138  Q
    ||||||||||||||| || ||| ||||| | ||||||| | ||||| |||||| ||||||        ||| ||||||| ||||||||||||| ||||||    
T  26802219 ttaggtgttgatggtgcaccattaaatagaatagacctacataatcaaatggtcctcttttaaaaaaaataatcaaacggtttaaattaaaatgattaat 26802120  T
Q  139 aggatctgtggtggatcacttttaaggttggtccatcatagacattt 185  Q
    | ||||| | |||||  ||| ||||||||||| || | |||||||||    
T  26802119 atgatctatagtggacaactcttaaggttggttcaccttagacattt 26802073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 30535674 - 30535759
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||||||||||||| ||||||  | | || | | |||||||| |  ||||||||| |||||| |||||||||||||||||||||||    
T  30535674 ggatttatttgacaaacggagttagatttgaggaactaaaacgttggttttattaattatggaaccaaaatgaaaactgaaaatta 30535759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 245 - 305
Target Start/End: Complemental strand, 835318 - 835258
Alignment:
Q  245 aaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||| |||||||||||| ||||| ||||||||||||||||| |||||| |||  |||||||    
T  835318 aaacgtgagttttattagttatgagaccaaaatgaaaactgcaaattaattaggggaccaa 835258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 119 - 284
Target Start/End: Original strand, 10722293 - 10722460
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagcca--aggatttattt 216  Q
    |||||||||||| ||||| ||| |||| || |||| |||| || |||||||||||||||||| |||||  |||||| ||| | ||||   || || ||||    
T  10722293 tttaaattaaaaaaattagtagaatctatgatggaccactctttaggttggtccatcatagatatttgaggttaaagttaacggccagggggcttcattt 10722392  T
Q  217 gacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaact 284  Q
    ||  |||| ||||| |  | |  ||| ||||||||||||||| || ||||| ||| ||||||||||||    
T  10722393 gattgacgaagacaaacgtgagagaccaaaacatgagttttactagttatgagacgaaaatgaaaact 10722460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 18821647 - 18821723
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    |||||||| || || || ||| |||||||||||||| |||| || |||| |||||||| ||||| ||||||||||||    
T  18821647 atcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagacatttg 18821723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 20064257 - 20064173
Alignment:
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||||| ||||| || |||||||||  |||||||||||||||||||| | |||||| || | ||||||||||  || ||||||||    
T  20064257 aaggaccaaaacgtgtgttttattagatatgggaccaaaatgaaaacgggaaattaattgagggaccaaatgagctattaagcct 20064173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 302
Target Start/End: Original strand, 34352008 - 34352056
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggac 302  Q
    |||||||| || ||||||||||||||||||| |||||||||||| ||||    
T  34352008 ttttattaattgtgggaccaaaatgaaaacttaaaattatttaagggac 34352056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 49802849 - 49802976
Alignment:
Q  155 cacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagt 254  Q
    |||||||||||||||| || ||||||||||| | ||| || ||| | | |  ||||||||||| || ||||||| | || | | |||||||||| | | |    
T  49802849 cacttttaaggttggtacaccatagacatttagagttgaagttaaccgtcg-ggatttatttggcaaacggagaaaaagatgagggactaaaacgtcatt 49802947  T
Q  255 tttattacttatgggaccaaaatgaaaac 283  Q
    ||||||| || ||||||||||||||||||    
T  49802948 tttattaattgtgggaccaaaatgaaaac 49802976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 9485218 - 9485285
Alignment:
Q  116 cgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||||||||||||||||||||||| | ||||  | |||| |||| |||| |||| |||||||||    
T  9485218 cgatttaaattaaaataattaataggatttatggttaaccactcttaaagttgatccaccatagacat 9485285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 306
Target Start/End: Complemental strand, 18819031 - 18818988
Alignment:
Q  263 ttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  18819031 ttatgggaccataatgaaaactgaaaattaattaaaggatcaaa 18818988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 308
Target Start/End: Original strand, 20069922 - 20069993
Alignment:
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    |||||| |||||||| |||||||||  |||| ||||||||||||||| | |||||| || | ||||||||||    
T  20069922 aaggaccaaaacatgtgttttattagatatgagaccaaaatgaaaacgggaaattaattgagggaccaaatg 20069993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 277
Target Start/End: Complemental strand, 8027334 - 8027292
Alignment:
Q  235 taaaggactaaaacatgagttttattacttatgggaccaaaat 277  Q
    |||||||||||||| |||||||||||| ||||| |||||||||    
T  8027334 taaaggactaaaacgtgagttttattaattatgagaccaaaat 8027292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 15071421 - 15071355
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||| |||||||  ||||||||| ||||| ||||||||||||||||  ||||||||||  |||||||    
T  15071421 ggaccaaaacatacgttttattaattatgtgaccaaaatgaaaacttgaaattatttaggggaccaa 15071355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 228
Target Start/End: Complemental strand, 23091523 - 23091441
Alignment:
Q  147 tggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccag-ccaaggatttatttgacagacggaga 228  Q
    ||||||| ||||||||| ||||||||| ||||||||||||   ||||||||| ||| | | ||||||||||| || |||||||    
T  23091523 tggtggaccacttttaaagttggtccaccatagacatttgagattaaacttaacagactagggatttatttggcaaacggaga 23091441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 24499692 - 24499758
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||| ||||| |||||||||||| || || ||||||||||||||||  ||||||||||  |||||||    
T  24499692 ggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaacttgaaattatttaggggaccaa 24499758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 13894821 - 13894760
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtc 171  Q
    |||||||| ||||||||||||||||||| ||||||| |||| ||  ||| || |||||||||    
T  13894821 atcaaacggtttaaattaaaataattaacaggatctatggtagacaactctttaggttggtc 13894760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 332
Target Start/End: Original strand, 49619887 - 49619952
Alignment:
Q  267 gggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcctatattaaaaga 332  Q
    ||||||||| |||||||||||||| | |||| ||||||||||   | |||||||||| ||||||||    
T  49619887 gggaccaaattgaaaactgaaaataaattaagggaccaaatgatgtattaagcctattttaaaaga 49619952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 2e-53; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 119 - 321
Target Start/End: Complemental strand, 46201330 - 46201129
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    |||| |||||||||||||||| ||||| ||||||| |||| ||||||||||| || ||||||||||||| |||||||||| ||| |  |||||||||||     
T  46201330 tttatattaaaataattaatatgatctatggtggaccactcttaaggttggttcaccatagacatttggggttaaacttaacaggcttggatttatttgg 46201231  T
Q  219 cagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaag 318  Q
    | |||||| ||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| |||   ||||||||| |||||||||    
T  46201230 ccgacggaaacacaattaaaggatcaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta-ttatgagaccaaatgacctcttaag 46201132  T
Q  319 cct 321  Q
    |||    
T  46201131 cct 46201129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 214 - 320
Target Start/End: Original strand, 35105 - 35211
Alignment:
Q  214 tttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctc 313  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||| || ||||||||||| |||||||||| |||     
T  35105 tttgacagacggagacacagttaaaggaccaaaacatgacttttattagatatgggaccaaaatgaaaattggaaattatttaagggaccaaatgaccta 35204  T
Q  314 ttaagcc 320  Q
    |||||||    
T  35205 ttaagcc 35211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 207 - 320
Target Start/End: Original strand, 46202288 - 46202401
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    ||||||||||||| |||||||||||| ||||| ||| | ||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||    
T  46202288 ggatttatttgaccgacggagacacaattaaatgaccagaacatgagttttattacttatgggatcaaaatgaaaactgtaaattatttaagggatcaaa 46202387  T
Q  307 tgccctcttaagcc 320  Q
     | ||| |||||||    
T  46202388 cgacctattaagcc 46202401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 322
Target Start/End: Complemental strand, 27858 - 27750
Alignment:
Q  214 tttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctc 313  Q
    ||||||||||||| ||||||||||||||| ||||||||| ||||||||  ||||| ||||||||||||| || ||||||||||| |||||||||| |||     
T  27858 tttgacagacggatacacagttaaaggaccaaaacatgacttttattagatatggaaccaaaatgaaaattggaaattatttaagggaccaaatgaccta 27759  T
Q  314 ttaagccta 322  Q
    |||||||||    
T  27758 ttaagccta 27750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 209 - 326
Target Start/End: Complemental strand, 38539780 - 38539663
Alignment:
Q  209 atttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    |||| |||||| |||||||| ||| |||| |||| |||||||||||||||||| ||||||||||||||||||||||  |||||| |||| ||| ||||||    
T  38539780 atttttttgaccgacggagagacaattaagggaccaaaacatgagttttattatttatgggaccaaaatgaaaacttgaaattaattaagggatcaaatg 38539681  T
Q  309 ccctcttaagcctatatt 326  Q
     ||| |||||||||||||    
T  38539680 acctattaagcctatatt 38539663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 181 - 308
Target Start/End: Complemental strand, 25533325 - 25533198
Alignment:
Q  181 catttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaa 280  Q
    ||||||| |||||||||| ||| ||  |||||||||||| |||||||| ||| || |||||| ||||||||| |||||||| ||||||||||||||||||    
T  25533325 catttggggttaaacttaacagtcagagatttatttgaccgacggagatacaattgaaggaccaaaacatgaattttattagttatgggaccaaaatgaa 25533226  T
Q  281 aactgaaaattatttaaaggaccaaatg 308  Q
    ||||  |||||| ||||  |||||||||    
T  25533225 aacttgaaattaattaagagaccaaatg 25533198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 2414952 - 2414869
Alignment:
Q  111 tcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    ||||||| |||||||||| | |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  2414952 tcaaacggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtccattatagacatttggggttaaa 2414869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 22537836 - 22537708
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| |||| |||| ||| ||||| ||||||| | |||||||||||||| ||||        | |||||||| |||||||||||||||||||||    
T  22537836 ttaggtgttggtggttcatcgtaagataaaatagacctgcataatccaatggttcccttttaaaaa--aaatcaaacggtttaaattaaaataattaata 22537739  T
Q  140 ggatctgtggtggatcacttttaaggttggt 170  Q
    |||||| |||||||||||| |||||||||||    
T  22537738 ggatctatggtggatcactattaaggttggt 22537708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 35295907 - 35295823
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| |||||||||||||| || ||| |||||| ||||||    
T  35295907 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccacagatatttggggttaaa 35295823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 165 - 321
Target Start/End: Original strand, 9662200 - 9662355
Alignment:
Q  165 gttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactt 264  Q
    ||||||||| ||||||||||||  |||||| ||| ||| |  ||||||||||||| |||||||||| |  | | |||| |||||||||||||| ||| ||    
T  9662200 gttggtccaccatagacatttgaagttaaatttaacagtct-ggatttatttgaccgacggagacaaacgtgagggaccaaaacatgagtttttttagtt 9662298  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||| || || |||||||||  |||||| ||| ||||||||||| ||| ||||||||    
T  9662299 atggaactaagatgaaaacttgaaattaattagaggaccaaatgacctattaagcct 9662355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 41328429 - 41328350
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||||| ||||||||| ||||||||||||||||| ||||||| || |||||| |||| |||| |||||||||||||    
T  41328429 atatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgttccaccatagacatttgg 41328350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 32255268 - 32255126
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||| ||| || || |||||||   ||||||||||||| |||||        | |||||||| || ||||||||||||||||||    
T  32255268 ttaggtgttggtggtacatcgtaagattaaatagacctgtctaatccaatggttatcttttacaaaaaa-atcaaacggttgaaattaaaataattaata 32255170  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||| ||||||| |||| |||||||||||||| |||| ||||    
T  32255169 ggatctatggtggaccactcttaaggttggtccaccataaacat 32255126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 39981525 - 39981448
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||| ||||||||| |||||||||| |||||| ||||||| || |||||| ||||||||| |||||||||||||    
T  39981525 atcaaacggtttaaattagaataattaattggatctatggtggaccatttttaaagttggtccaccatagacatttgg 39981448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 43460730 - 43460803
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||| | ||||||||||||||||||||||||||| ||||||| |||| |||| ||||||||| |||||||||    
T  43460730 atcaaagggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacat 43460803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 283
Target Start/End: Complemental strand, 22336176 - 22336014
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatag--acatttggtgttaaacttaccagccaaggatttatttgac 219  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||| |||| |||||   ||||||| |||||||||| ||  |  ||||||||||| |    
T  22336176 aaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatagcatcatttggggttaaacttaacattc-gggatttatttggc 22336078  T
Q  220 agacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaac 283  Q
    | || |||  | || | | ||||||||||   | |||||||| || ||||||||||||||||||    
T  22336077 aaactgaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaac 22336014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 292
Target Start/End: Original strand, 47060384 - 47060565
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    ||||||||||| || || ||| | |||||| | ||| |||||||  | | |||||||||||||| |||| ||||||||||||||||||| ||| |  |||    
T  47060384 atcaaacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccatatacatttggtgttaaacttaacagtc-cgga 47060482  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||||||| || ||||| | |  | | | |||| ||||| |  ||||||||| |||| ||||||||||||||||| |||||||    
T  47060483 tttatttggcaaacggaaaaaagggtgagggaccaaaacgtacgttttattaattataggaccaaaatgaaaacttaaaatta 47060565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 15992328 - 15992267
Alignment:
Q  125 ttaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    ||||||||||||||||||||| ||||  |||||| |||||||||||||| ||||||||||||    
T  15992328 ttaaaataattaataggatctttggtaaatcactcttaaggttggtccaccatagacatttg 15992267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 40811529 - 40811456
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| ||||||||||||  |||||||| |||| ||||||| |||| |||||||||||||| |||||||||    
T  40811529 atcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacat 40811456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 283
Target Start/End: Original strand, 13564076 - 13564320
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| | |||||||||||  |||| ||||| |   |||||||||||||||||||          ||| |||| || ||||||||||||||||||    
T  13564076 ttaggtgttggtagtacatcataagctaaaatagacatgtctaatccaatggttctctttttaaaaaataatctaacggttcaaattaaaataattaata 13564175  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcatagac---atttggtgttaaacttaccagccaaggatttatttgacagacggagacacagtta 236  Q
    |||||| ||||||| |||| |||||| || |||| |||||||   |||||| |||||||||| |  |   ||||||||||| || ||||||  | |  |     
T  13564176 ggatctatggtggaccactcttaaggatgatccaccatagacattatttggggttaaacttaacgtc--gggatttatttggcaaacggaggaaaatgtg 13564273  T
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaac 283  Q
    | ||||||||||   |||||||||| || ||||||||||||||||||    
T  13564274 agggactaaaacgccagttttattaattgtgggaccaaaatgaaaac 13564320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 206
Target Start/End: Complemental strand, 16756067 - 16755983
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaa 206  Q
    |||||||||||||||||||||||| |||| ||  ||||||||||||| | || ||||||||||||  |||||| ||| |||||||    
T  16756067 aaattaaaataattaataggatctatggtagacaacttttaaggttgtttcaccatagacatttgaggttaaagttaacagccaa 16755983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 44372937 - 44372853
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||| |||| |||| ||| |||||  |||||||||| | ||||||    
T  44372937 atcaaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacatttagggttaaa 44372853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 44381793 - 44381709
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||| |||| |||| ||| |||||  |||||||||| | ||||||    
T  44381793 atcaaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacatttagggttaaa 44381709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 155 - 296
Target Start/End: Original strand, 33779040 - 33779178
Alignment:
Q  155 cacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagt 254  Q
    |||| |||||||||||||| ||||||||||||  |||||||||| ||||||| |||||||| |   | |||||  | |    | |||||||||| |||||    
T  33779040 cactcttaaggttggtccaccatagacatttgtggttaaacttaacagccaaagatttattgg---ggcggaggaaaaagcgagggactaaaacgtgagt 33779136  T
Q  255 tttattacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    ||||||| || |||| ||||||||||||||  ||||||||||    
T  33779137 tttattaattgtggggccaaaatgaaaacttgaaattattta 33779178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 43441556 - 43441470
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||||  |||| |||||||||||||||||||  | ||||||| |||| ||||||||||| || ||||||||||| | ||||||    
T  43441556 atatcaaacagtttacattaaaataattaataggacttatggtggaccactcttaaggttggtacaccatagacatttagggttaaa 43441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 43459614 - 43459477
Alignment:
Q  158 ttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagtttt 257  Q
    ||||||||||| |||| ||||||||||||| |||||||||| ||||| | |||||||||| || ||||||  | |  | | ||||| ||||    |||||    
T  43459614 ttttaaggttgatccaccatagacatttggagttaaacttaacagccga-gatttatttggcaaacggaggaaaacatgagggacttaaacgcacgtttt 43459516  T
Q  258 attacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    |||| || |||||||||||||||||||  ||||||||||    
T  43459515 attaattgtgggaccaaaatgaaaacttgaaattattta 43459477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 11502340 - 11502401
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    ||||||||||||||| |||||||| ||||||| |||| |||||||||||| | |||||||||    
T  11502340 aaattaaaataattactaggatctatggtggaccactcttaaggttggtctaccatagacat 11502401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 296
Target Start/End: Original strand, 40509679 - 40509828
Alignment:
Q  147 tggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaa 246  Q
    ||||||| |||| ||||||||||||||  |||||||||||| |||||||||| || | || ||||||||||  | ||||||  | |  | | | ||| ||    
T  40509679 tggtggaccactcttaaggttggtccactatagacatttggggttaaacttaacaccgaatgatttatttggtaaacggaggaaaaagtgaggaacttaa 40509778  T
Q  247 acatgagttttattacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    || |  ||||||||| || |||||||||||||||||||  ||||||||||    
T  40509779 acgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattta 40509828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 669297 - 669372
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    |||||||| |||||||||| | |||||||||||||| ||||||| |||| |||| | ||||||| ||||||||||||    
T  669297 atcaaacggtttaaattaacaaaattaataggatctatggtggaccactcttaa-gatggtccaccatagacatttg 669372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 296
Target Start/End: Complemental strand, 40508588 - 40508400
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaag 207  Q
    |||||||||| || ||||| ||| |||||||   |||| |||||||  ||| ||||| ||| |||| |||||||||||||  ||||||||| || | |||    
T  40508588 atatcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccatagacatttgggattaaacttaacaccgaag 40508489  T
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    |||||||||| |  ||||||  | |  | | ||||| |||| |  ||||||||| || |||||| ||||||||||||  ||||||||||    
T  40508488 gatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaaaatgaaaacttgaaattattta 40508400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 22115109 - 22115179
Alignment:
Q  147 tggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttg 217  Q
    ||||||| |||| ||||||||||||||  |||||||||||| |||||||||| || | || ||||||||||    
T  22115109 tggtggaccactcttaaggttggtccactatagacatttggggttaaacttaacaccgaangatttatttg 22115179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 32603012 - 32602946
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| |  ||||||||| ||||||||||||||| ||||||  ||||||||| |||||||||    
T  32603012 ggactaaaacgtacgttttattaattatgggaccaaaataaaaacttgaaattatttgaaggaccaa 32602946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 208 - 261
Target Start/End: Complemental strand, 9660783 - 9660730
Alignment:
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttatta 261  Q
    ||||| |||||| |||||||| ||| ||||||||| ||||||||||||||||||    
T  9660783 gatttttttgaccgacggagagacaattaaaggaccaaaacatgagttttatta 9660730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 263 - 305
Target Start/End: Original strand, 10942313 - 10942355
Alignment:
Q  263 ttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||| ||||||||||||||||||||| |||| |||||||    
T  10942313 ttatgggatcaaaatgaaaactgaaaattaattaagggaccaa 10942355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 254 - 304
Target Start/End: Original strand, 32256447 - 32256497
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |||||||| ||||||||||||||||||||||  ||||||||| | ||||||    
T  32256447 ttttattaattatgggaccaaaatgaaaacttgaaattatttgagggacca 32256497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 324
Target Start/End: Complemental strand, 41328287 - 41328213
Alignment:
Q  250 tgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcctata 324  Q
    |||||||||  | |||||||||||||||| ||||  | ||||||||| ||||||||||| ||  |||||||||||    
T  41328287 tgagttttacaatttatgggaccaaaatgtaaacgcataattatttagaggaccaaatgtccaattaagcctata 41328213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 208 - 305
Target Start/End: Complemental strand, 30333395 - 30333298
Alignment:
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||||||| ||||||| | |  | | |||| |||| ||  ||||||||| || |||||||||||||||||||  ||||||||||  |||||||    
T  30333395 gatttatttgacaaacggagaaaaaaatgagggaccaaaagatacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaa 30333298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 110 - 320
Target Start/End: Complemental strand, 35903715 - 35903506
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| |||||||||||||| |||||||||||| ||||||| |||| | || ||   || ||||||||||||||| |||||||||| ||||||||||    
T  35903715 atcaaacggtttaaattaaaatatttaataggatctatggtggaccactctaaaagtaa-tctatcatagacatttggggttaaacttaacagccaagga 35903617  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgc 309  Q
    |||||||||| |||||||| | | || | |||| ||||||||| |||||||| ||||||||||||||||||||||  |||||| |||||||||||||||     
T  35903616 tttatttgactgacggagatataattgagggaccaaaacatgacttttattagttatgggaccaaaatgaaaacttgaaattaattaaaggaccaaatga 35903517  T
Q  310 cctcttaagcc 320  Q
    ||| |||||||    
T  35903516 cctattaagcc 35903506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 165 - 322
Target Start/End: Complemental strand, 34147289 - 34147132
Alignment:
Q  165 gttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactt 264  Q
    ||||||||| ||||||||||||| |||||| ||| || ||| ||||||||||||| | |||||    | || | |||| |||||||||||||||||||||    
T  34147289 gttggtccaccatagacatttggggttaaagttaacacccatggatttatttgactggcggaggtgaacttgagggaccaaaacatgagttttattactt 34147190  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    ||||||||||||||||||||||||||||||| | |||||||||| ||| |||||||||    
T  34147189 atgggaccaaaatgaaaactgaaaattatttgagggaccaaatgacctattaagccta 34147132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 306
Target Start/End: Complemental strand, 29219664 - 29219397
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||| ||| ||||| |||||||   |||||||||||||||||||        | |||||||| || ||||||||||||||||||    
T  29219664 ttaggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttttttttaaa-atcaaacggttgaaattaaaataattaata 29219566  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaaggatttatttgacagacggagacacagtta 236  Q
    |||||| ||||||| |||||||||| |||||||| ||||||   ||||||| |||||||||| |||    ||||||||||| || ||||||  | || |     
T  29219565 ggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacag-ttgggatttatttggcaaacggaggaaaaggtg 29219467  T
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    | ||||||||||   | |||||||| || ||||||||||||||||||   ||||||  ||||||||||||    
T  29219466 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaa 29219397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 40 - 306
Target Start/End: Complemental strand, 29332963 - 29332696
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||| ||| ||||| |||||||   |||||||||||||||||||        | |||||||| || ||||||||||||||||||    
T  29332963 ttaggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttttttttaaa-atcaaacggttgaaattaaaataattaata 29332865  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaaggatttatttgacagacggagacacagtta 236  Q
    |||||| ||||||| |||||||||| |||||||| ||||||   ||||||| |||||||||| |||    ||||||||||| || ||||||  | || |     
T  29332864 ggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacag-ttgggatttatttggcaaacggaggaaaaggtg 29332766  T
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    | ||||||||||   | |||||||| || ||||||||||||||||||   ||||||  ||||||||||||    
T  29332765 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaa 29332696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 207 - 321
Target Start/End: Original strand, 35904748 - 35904862
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||| |||||| |||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||||| |  |||||||||||||||| |||    
T  35904748 ggatttttttgactgacggagacagaattaaaggaccaaaacatgagttttattacttatggggccaaaatgaaaattagaaattatttaaaggactaaa 35904847  T
Q  307 tgccctcttaagcct 321  Q
    || ||| ||||||||    
T  35904848 tgacctattaagcct 35904862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 40 - 308
Target Start/End: Original strand, 18616842 - 18617112
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||| ||| ||||| |||||||   |||||||||||||||||||        | |||||||| || ||||||||||||||||||    
T  18616842 ttaggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctcttttttaaaaaaaatcaaacggttgaaattaaaataattaata 18616941  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaaggatttatttgacagacggagacacagtta 236  Q
    |||||| ||||||| ||||||||||  ||||||| ||||||   ||||||| ||||||||||  ||    ||||||||||| || ||||||  | || |     
T  18616942 ggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaatag-ttgggatttatttggcaaacggaggaaaaggtg 18617040  T
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    | ||||||||||   | |||||||| || ||||||||||||||||||   ||||||  ||||||||||||||    
T  18617041 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaataaaggaccaaatg 18617112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 110 - 322
Target Start/End: Original strand, 34513461 - 34513673
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| |||||||||||| |||||||| | ||| |||||||||||| |||||||||||| | |||| |||||||| ||||| |||| |  ||| |||    
T  34513461 atcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtcaaccatatacatttggggttaagcttaacgaccaggga 34513560  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgc 309  Q
     |||||||||  |||||| || |    |  |||  ||||||||||||||||| |||||| ||||||||||||| ||  ||||| |||  ||||||||||     
T  34513561 attatttgactaacggaggcaaacccgagagacctaaacatgagttttattaattatggaaccaaaatgaaaattggtaattaattaggggaccaaatga 34513660  T
Q  310 cctcttaagccta 322  Q
    ||| |||||||||    
T  34513661 cctattaagccta 34513673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 165 - 307
Target Start/End: Original strand, 2277432 - 2277574
Alignment:
Q  165 gttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactt 264  Q
    ||||||||| ||||||||||||| |||||| ||| |  ||| ||||||||||||| ||| |||    | || | |||| ||||||| |||||||||||||    
T  2277432 gttggtccaccatagacatttggggttaaagttaactcccatggatttatttgaccgactgaggtgaacttgagggaccaaaacataagttttattactt 2277531  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    ||||||||||||||||||||| ||||||||| | |||||||||    
T  2277532 atgggaccaaaatgaaaactggaaattatttgagggaccaaat 2277574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 110 - 305
Target Start/End: Complemental strand, 11547868 - 11547672
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat---ttggtgttaaacttaccagccaa 206  Q
    |||||||| ||||||||| || | |||||| ||||| ||||||| ||||  |||||||||||||| ||||||||   |||| |||||||||| ||| ||     
T  11547868 atcaaacggtttaaattataa-atttaatacgatctatggtggaccactcctaaggttggtccatgatagacatcatttggggttaaacttaacagtca- 11547771  T
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||||||| ||| ||  | |  | | ||  ||||||||| ||||||||| ||||| ||||||||||||||||  |||||||||||||||||||    
T  11547770 ggatttatttgacaaacgaaggaaaaaatgaggggttaaaacatgtgttttattaattatgagaccaaaatgaaaacttgaaattatttaaaggaccaa 11547672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 2276360 - 2276277
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||| | |||||||||| ||| |||||||||    
T  2276360 ggaccaaaacatgagttttattacttataggactaaaatgaaaactgaaaattatttgagggaccaaatgacctattaagccta 2276277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 205 - 323
Target Start/End: Original strand, 34148363 - 34148481
Alignment:
Q  205 aaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||||||||| |||||||    | || | |||| |||||||||||||||||| |||||| || ||||||||||||||||||||||| | ||||||    
T  34148363 aaggatttatttgaccgacggaggtgaacttgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggacca 34148462  T
Q  305 aatgccctcttaagcctat 323  Q
    |||| ||| ||||||||||    
T  34148463 aatgacctattaagcctat 34148481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 37957061 - 37956961
Alignment:
Q  206 aggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||| |||||| |||||||| ||| |||| |||| ||||||||| ||||||||||||||||||||||||||||| |  |||||| |||| |||||||    
T  37957061 aggatttctttgaccgacggagagacaattaagggaccaaaacatgaattttattacttatgggaccaaaatgaaaatttgaaattaattaagggaccaa 37956962  T
Q  306 a 306  Q
    |    
T  37956961 a 37956961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 317
Target Start/End: Original strand, 7753435 - 7753640
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    ||||| || |||||||||||| |||||||| | ||| ||||||||||| |  || |||| |||| |||| |||||||| |||||| ||| || |||| ||    
T  7753435 atcaagcggtttaaattaaaa-aattaatacggtctatggtggatcacctacaatgttgatccaccatatacatttggagttaaagttaacacccaaaga 7753533  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgc 309  Q
    |||||| ||| ||||  || ||| |||| |||| ||||||||||||| |||| |||| ||||||||||||||| |  |||||| |||  ||||||||||     
T  7753534 tttattagaccgacgaggagacaattaagggacaaaaacatgagtttaattaattat-ggaccaaaatgaaaatttgaaattaattaggggaccaaatga 7753632  T
Q  310 cctcttaa 317  Q
    ||| ||||    
T  7753633 cctattaa 7753640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 304
Target Start/End: Original strand, 11317277 - 11317470
Alignment:
Q  112 caaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat--ttggtgttaaacttaccagccaagga 209  Q
    |||||||||||||||||||||||||||||||||| |||| || |||| |||||||||||| | |||||||||  || | |||||||||| | |   ||||    
T  11317277 caaacgatttaaattaaaataattaataggatctatggtagaccactcttaaggttggtctaccatagacatcatttgagttaaacttaactg-tgagga 11317375  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |||||||| || ||||||  | | || | |||| |||| ||  ||||||||| || ||||||||||||||||| |  ||||||||| | ||||||    
T  11317376 tttatttgccaaacggaggaaaaattgagggaccaaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaattatttgagggacca 11317470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 318
Target Start/End: Complemental strand, 33996058 - 33995948
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    ||||||||||||| |||||||  | | |||| ||||||||||||||||||||||| |||| |||| |||||||||||| ||||||| |||| ||||||||    
T  33996058 ggatttatttgaccgacggagggaaaattaagggactaaaacatgagttttattagttat-ggacaaaaatgaaaacttaaaattaattaagggaccaaa 33995960  T
Q  307 tgccctcttaag 318  Q
    || ||| |||||    
T  33995959 tgacctattaag 33995948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 119 - 297
Target Start/End: Complemental strand, 43033280 - 43033103
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    ||||||||||||||||||||||| | | ||||||| |||| |||||||||||| | ||||||||||||  |||||||||| ||  | ||||||||||||     
T  43033280 tttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatagacatttgaggttaaacttaaca-tcgaggatttatttgg 43033182  T
Q  219 cagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaa 297  Q
    || ||||||  | |  | | |||| ||||  |  ||||||||| || |||||||||||||||||||  |||||||||||    
T  43033181 caaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaa 43033103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 302
Target Start/End: Complemental strand, 17459463 - 17459269
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaa 206  Q
    |||||||| ||||||||| ||||||||||||||||| || | ||||||||||||| || ||||| ||||||   ||||||| ||||||||||  || | |    
T  17459463 atcaaacggtttaaattataataattaataggatctatgttagatcacttttaagattcgtccaccatagacatcatttggggttaaacttaaaagtc-a 17459365  T
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggac 302  Q
    | ||||||||| || ||||||  | |  | | ||||| |||| |  ||||||||| || || ||||||||||||||||  ||||||||||| ||||    
T  17459364 gaatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaaaacttgaaattatttaagggac 17459269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 34467716 - 34467607
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaag 207  Q
    |||||||||  |||||||||||| | |||||| | | | ||||||| |||| |||||||| ||||||||||||||||||  |||||||| | |||||| |    
T  34467716 atatcaaacagtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatcatagacatttgaagttaaactcaacagccagg 34467617  T
Q  208 gatttatttg 217  Q
    ||||||||||    
T  34467616 gatttatttg 34467607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 119 - 307
Target Start/End: Complemental strand, 34513011 - 34512825
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    |||||||||||| | |||||| | | | ||||||| |||| ||| ||||| |||| |||| |||||  | |||||||||| ||| || | ||||||||||    
T  34513011 tttaaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatatacattaag-gttaaacttaacagtcatg-atttatttga 34512914  T
Q  219 cagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    |  |||||| || | || | |||  |||||||||||||||||| |||||||||||||||||||||||  ||||| |||  |||||||||    
T  34512913 ctaacggaggcaaatttgagggatcaaaacatgagttttattaattatgggaccaaaatgaaaactggtaattaattaggggaccaaat 34512825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 35061348 - 35061434
Alignment:
Q  234 ttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||| |||||||||| |||||||||||| |||||| |||||||||||||||  |||||| |||| |||||||||| ||| ||||||||    
T  35061348 ttaagggactaaaacgtgagttttattagttatgg-accaaaatgaaaacttcaaattaattaagggaccaaatgacctattaagcct 35061434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 4920966 - 4921043
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||| ||||||||| ||||||||||||||| | ||||||| || |||||| ||||||| | |||||||||||||    
T  4920966 atcaaacggtttaaattagaataattaataggatttatggtggaccatttttaaagttggtctaccatagacatttgg 4921043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 6030377 - 6030450
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| ||||||||||||  ||||||||||||| |||| ||||||| |||||||||||||| | |||||||    
T  6030377 atcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttggtccaccgtagacat 6030450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 305
Target Start/End: Complemental strand, 11316102 - 11315946
Alignment:
Q  148 ggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaa 247  Q
    |||||| || ||||||||||| |||| |||||||||||||  ||||||||| |||||  ||||||||||| || ||||||  | |  | | ||||| |||    
T  11316102 ggtggaccatttttaaggttgatccaccatagacatttggaattaaacttaacagcc-gggatttatttggcaaacggaggaaaacctgagggacttaaa 11316004  T
Q  248 catgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    | |  ||||||||| || |||||||||||||||||||  ||||||||||  |||||||    
T  11316003 cgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttaggggaccaa 11315946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 42641768 - 42641841
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||  ||||||||||||||||||||||||||| |||| || |||| |||||||||| ||| |||||||||    
T  42641768 atcaaacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagacat 42641841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 35061339 - 35061267
Alignment:
Q  250 tgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||  |||  ||||| ||| |||||||||    
T  35061339 tgagttttattagttatgggaccaaaatgaaaactgaaaattaattaggggattaaatgacctattaagccta 35061267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 32469360 - 32469285
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| | ||||||||||||||||||||||||||| | ||||| |||| |||| ||||||||| |||| ||||    
T  32469360 atatcaaagggtttaaattaaaataattaataggatctatagtggaccactcttaaagttggtccaccatatacat 32469285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 30749325 - 30749383
Alignment:
Q  234 ttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||| |||| |||||||||||||||||| ||||||||| ||||||||||||| ||||||    
T  30749325 ttaagggaccaaaacatgagttttattaattatgggactaaaatgaaaactggaaatta 30749383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 308
Target Start/End: Complemental strand, 34464176 - 34463978
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||  |||||||||||| |  ||||| | ||| ||||||| |||| |||||||||||| |  |||||||||||| |||||||||| ||| ||  ||    
T  34464176 atcaaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgatagacatttggggttaaacttaacagtcagaga 34464077  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    |||||||||   |||||| || |  | | |||| |||| ||  ||||||||| ||||   ||||||||||||||||  ||||| |||  ||||||||||    
T  34464076 tttatttgattaacggaggcaaacctgatggaccaaaagatttgttttattaattatcaaaccaaaatgaaaactggtaattaattaggggaccaaatg 34463978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 28611161 - 28611237
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||| ||||||||||| ||||||||||||||| | ||||| || |||||| || |||||| |||||||||||||    
T  28611161 atcaaacggtttaaattaaa-taattaataggatctatagtggaccatttttaaagtcggtccaccatagacatttgg 28611237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 180
Target Start/End: Complemental strand, 8320965 - 8320895
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga 180  Q
    |||||||| |||||||||||||||||||||  |||| ||||||| | || |||||| ||||||| ||||||    
T  8320965 atcaaacggtttaaattaaaataattaatataatctatggtggaccgctcttaaggatggtccaccataga 8320895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 32470532 - 32470669
Alignment:
Q  158 ttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagtttt 257  Q
    ||||||||||  |||| ||||||||||||| |||||||||| |||||  |||||||||||||| ||||||  | |  | | | ||| |||| |  |||||    
T  32470532 ttttaaggtttatccaccatagacatttggagttaaacttaacagcc-gggatttatttgacaaacggaggaaaacatgaggaacttaaacgtacgtttt 32470630  T
Q  258 attacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    |||| || |||||||||||| ||||||  ||||||||||    
T  32470631 attaattgtgggaccaaaataaaaacttgaaattattta 32470669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 227
Target Start/End: Original strand, 43034400 - 43034496
Alignment:
Q  132 aattaataggatctgtggtggatcacttttaaggttggtccatcatagacattt--ggtgttaaacttaccagccaaggatttatttgacagacggag 227  Q
    |||||||||||||| ||||||| |||| |||| |||| |||| |||||||||||  |  |||||||||| |||| || ||||||||||||| ||||||    
T  43034400 aattaataggatctatggtggaccactcttaaagttgatccaccatagacatttgagaggttaaacttaacagcgaa-gatttatttgacaaacggag 43034496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 113 - 150
Target Start/End: Original strand, 16290705 - 16290742
Alignment:
Q  113 aaacgatttaaattaaaataattaataggatctgtggt 150  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  16290705 aaacgatttaaattaaaataattaataggatctatggt 16290742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 198
Target Start/End: Original strand, 30749233 - 30749320
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaactta 198  Q
    |||| ||| |||||||||||||||||||||||  |||| ||| | |||| |||||||||||  | ||||||||||||  ||||||||||    
T  30749233 atcatacggtttaaattaaaataattaataggccctgtagtgaaccactcttaaggttggt-taccatagacatttgaggttaaactta 30749320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 28561433 - 28561382
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||| || || |||||||||||||||| |||||||||||| ||||||    
T  28561433 gttttattaattgtgagaccaaaatgaaaacttaaaattatttaagggacca 28561382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 322
Target Start/End: Original strand, 9474103 - 9474172
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    |||| |||| |||| ||| ||||||||||| ||||||||| |||  |||||||||| ||| |||||||||    
T  9474103 gtttcattatttataggaacaaaatgaaaattgaaaattaattaggggaccaaatgacctattaagccta 9474172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 30748687 - 30748646
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtg 151  Q
    ||||||| |||||||||||||||||||||| ||||| |||||    
T  30748687 atcaaacaatttaaattaaaataattaatatgatctatggtg 30748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2071 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 110 - 320
Target Start/End: Original strand, 589 - 799
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| |||||||||||| | |||||| | ||| ||||||| |||| ||||||||||||||| ||| |||||||  |||||||||  ||  || |||    
T  589 atcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccattatatacatttgaggttaaacttgacaatcaggga 688  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgc 309  Q
    |||||||||| ||| |||||| | || | |||| |||||||||||||||||| ||||||||||||||||||||||| |||||| ||| |||||||||||     
T  689 tttatttgaccgacagagacaaacttgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattagaggaccaaatga 788  T
Q  310 cctcttaagcc 320  Q
    ||| |||||||    
T  789 cctattaagcc 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 5e-39; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 122 - 320
Target Start/End: Complemental strand, 38696504 - 38696306
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacag 221  Q
    |||||| || |||||||  ||||| ||||||| ||||||||||||||||| | ||||||||||| | ||||||||||  ||| | ||||||||||||| |    
T  38696504 aaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccatagacatttagggttaaacttaatagcaagggatttatttgaccg 38696405  T
Q  222 acggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcc 320  Q
    |||||| || | || | |||| |||||||||||||||||| ||||| |||||||||||||||| ||||||| |||  |||||||||| ||| |||||||    
T  38696404 acggaggcaaacttgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttaaaattaattaggggaccaaatggcctattaagcc 38696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 208 - 321
Target Start/End: Original strand, 41743621 - 41743734
Alignment:
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    ||||| |||||| |||||||| ||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  41743621 gatttttttgaccgacggagaaacaattaaaggaccaaaacataagttttattacttatgggaccaaaatgaaaacttaaaattaattaaaggaccaaat 41743720  T
Q  308 gccctcttaagcct 321  Q
    | ||| ||||||||    
T  41743721 gacctattaagcct 41743734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 108 - 307
Target Start/End: Original strand, 14840805 - 14841004
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaag 207  Q
    |||||||||| |||||||||||| | |||||| || || ||||||||||||||||| ||||||||| ||||||||||||  ||||||||||  | | |      
T  14840805 atatcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccatagacatttgtggttaaacttaagaacgaga 14840904  T
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    ||||||||||| ||||||||||| |  | | |||| ||||||||| |||||||| |||||| ||||||||||||| |  |||||| | ||| ||||||||    
T  14840905 gatttatttgatagacggagacaaatatgagggaccaaaacatgaattttattagttatggtaccaaaatgaaaatttgaaattaatcaaaagaccaaat 14841004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 128 - 322
Target Start/End: Complemental strand, 42877808 - 42877615
Alignment:
Q  128 aaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggag 227  Q
    |||||||||||||||||| ||||||| || | |||||||||||||| |||| |||||||| |||||| ||| | | |  ||||||||||||| |||| ||    
T  42877808 aaataattaataggatctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccgtcg-ggatttatttgactgacgaag 42877710  T
Q  228 acacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    ||| |  | | |||| |||||||||||||||||| ||||| ||||||||||||||||  |||||| ||||  ||||||||  ||| |||||||||    
T  42877709 acaaacgtgagggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaattaattaagagaccaaataacctattaagccta 42877615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 110 - 304
Target Start/End: Original strand, 32798439 - 32798634
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat--ttggtgttaaacttaccagccaag 207  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||||||| |||| |||||||||  || | |||||||||| | |   ||    
T  32798439 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcatttgagttaaacttaaccg-tgag 32798537  T
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||||||| ||||||| | | || | |||||||||  |  ||||||||| || |||||||||||||||||||  ||||||||| | ||||||    
T  32798538 gatttatttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacca 32798634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 40 - 209
Target Start/End: Original strand, 24192500 - 24192670
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntata-tcaaacgatttaaattaaaataattaat 138  Q
    |||||||||| || |||||| ||||||||| ||||| | ||||||| |||||||||||||        | | ||||||| ||| ||||||||||||||||    
T  24192500 ttaggtgttggtgatacatcctaaaataaaatagacatgcgtaatctaatggttctcttttaagaaaaaaaatcaaacggttttaattaaaataattaat 24192599  T
Q  139 aggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    ||||||| ||||||| |||| |||||||||||||| ||||||||||| | |||||| ||| ||| ||||||    
T  24192600 aggatctatggtggaccactcttaaggttggtccaccatagacatttagggttaaagttaacagtcaagga 24192670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 10669352 - 10669461
Alignment:
Q  109 tatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagg 208  Q
    |||||| || |||||||||||||| |||||||||||| ||||||| |||| ||||||||||| || ||||||||||||  |||||| ||| |||||||||    
T  10669352 tatcaatcggtttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccatagacatttgaggttaaagttaacagccaagg 10669451  T
Q  209 atttatttga 218  Q
    | || |||||    
T  10669452 acttttttga 10669461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 323
Target Start/End: Original strand, 38697012 - 38697127
Alignment:
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    |||||||||||| ||||||| || |  | |||||  |||||||||||||||||| ||||||||||||||||||||||| |||||| || | |||||||||    
T  38697012 gatttatttgaccgacggaggcaaatgtgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaactggaaattaattgagggaccaaat 38697111  T
Q  308 gccctcttaagcctat 323  Q
    |  || ||||||||||    
T  38697112 gagctattaagcctat 38697127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 51 - 218
Target Start/End: Complemental strand, 17455314 - 17455147
Alignment:
Q  51 tggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaataggatctgtggt 150  Q
    ||||||||| ||| ||||| ||||||| ||||||| |||||| ||||||       || || ||||| || |||||||||||||||||| ||||| ||||    
T  17455314 tggtacatcgtaagataaaatagacctgcgtaatctaatggtcctcttttaaaaaatagataaaacggttcaaattaaaataattaataagatctatggt 17455215  T
Q  151 ggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    ||| |||||||||| |||||| | |||||| |||||  |||||| ||| ||   ||||||||||||||    
T  17455214 ggaccacttttaagattggtctagcatagatatttgaagttaaagttaacataaaaggatttatttga 17455147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 166 - 308
Target Start/End: Complemental strand, 45395119 - 45394977
Alignment:
Q  166 ttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactta 265  Q
    |||||||| |||||| |||||| |||||| ||| | | || ||||||||||||  ||| |||| ||| ||||   || |||||||||||||||||| |||    
T  45395119 ttggtccaccatagatatttggagttaaagttaaccgtcagggatttatttgatcgacagagagacaattaagtaaccaaaacatgagttttattaatta 45395020  T
Q  266 tgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    ||||| ||||||||||||| ||||||| |||| ||| ||||||    
T  45395019 tgggatcaaaatgaaaacttaaaattaattaagggatcaaatg 45394977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 295
Target Start/End: Complemental strand, 22551214 - 22551030
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| ||||||||| || | |||||| | | | ||||||||||||||||||||| ||||| |||||| |||||| |||||||||| ||  | ||||    
T  22551214 atcaaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttgtccaccatagagatttggggttaaacttaacaatccagga 22551115  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattt 295  Q
    |||||||| || | ||||| | || | | |||| |||| ||  ||||||||| || |||||||||||| ||||||  |||||||||    
T  22551114 tttatttggcaaatggagaaaaag-tgagggaccaaaagatacgttttattaattgtgggaccaaaataaaaacttgaaattattt 22551030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 132 - 304
Target Start/End: Original strand, 42872120 - 42872291
Alignment:
Q  132 aattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacac 231  Q
    |||||||||||||| |||| || |||| |||||||||||| | ||||||||||||  |||||| ||| | | | ||||||||||||||| ||||||  |     
T  42872120 aattaataggatctatggtagaccactcttaaggttggtctaccatagacatttgaggttaaagttaaccgtc-aggatttatttgacaaacggaggaaa 42872218  T
Q  232 agttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |  | |||||||||||| |  ||||||||  ||||| ||  |||||||||||| |||||||||||| ||||||    
T  42872219 aagtgaaggactaaaacgtacgttttattcattatgagattaaaatgaaaacttaaaattatttaagggacca 42872291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 230
Target Start/End: Complemental strand, 42098772 - 42098651
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaa 206  Q
    |||||||| || |||||||| ||||||||||||||| ||||||| ||||||||||||||||||| || |||   ||||||| |||||| ||| ||| |      
T  42098772 atcaaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaacagtc-- 42098675  T
Q  207 ggatttatttgacagacggagaca 230  Q
    ||||||||||| || |||||||||    
T  42098674 ggatttatttggcaaacggagaca 42098651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 40437502 - 40437565
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtc 171  Q
    |||||||||  |||||||||||||||||||||||||||  |||||| |||||||||||||||||    
T  40437502 atatcaaacagtttaaattaaaataattaataggatctacggtggaccacttttaaggttggtc 40437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 32695112 - 32695254
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||| ||| ||| ||||| ||||| |   |||||||||||||||||||        | |||||||| |||||||||||||||||||||    
T  32695112 ttaggtgttggtggtatatcgtaagataaaatagacttgtctaatccaatggttctcttttaaaaaaaa-atcaaacggtttaaattaaaataattaata 32695210  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||| ||||||| || | ||||| ||||| || |||||||||    
T  32695211 ggatctatggtggaccaatcttaagattggttcaccatagacat 32695254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 9854787 - 9854864
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||| | ||||||||| || |||||||||||||| ||||||| |||| |||| ||||||||| |||||||||||||    
T  9854787 atcaaatggtttaaattagaagaattaataggatctatggtggaccactcttaaagttggtccaccatagacatttgg 9854864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 20180582 - 20180666
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||| |||| |||| ||| |||||  |||||||||| | ||||||    
T  20180582 atcaaacggttttaattaaaataattaataggatctatggtggaccactcttaatgttagtccactatagacatttagggttaaa 20180666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 42878859 - 42878935
Alignment:
Q  245 aaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||||||||||| |||| ||||||||||||||||||||||  |||||| |||  |||||||||| ||| ||||||||    
T  42878859 aaacatgagtttcattagttatgggaccaaaatgaaaacttgaaattaattaggggaccaaatgacctattaagcct 42878935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 45437462 - 45437601
Alignment:
Q  182 atttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaa 281  Q
    |||||| |||||||||| ||| || |||||||||||||   ||||| || |    | |||| |||||||||||||||||| |||||||| ||||||||||    
T  45437462 atttggggttaaacttaacagtcagggatttatttgactagcggaggcaaacacgagggaccaaaacatgagttttattaattatgggatcaaaatgaaa 45437561  T
Q  282 actgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||  |||||| |||  ||| |||||| ||| ||||||||    
T  45437562 acttgaaattaattaggggatcaaatgacctattaagcct 45437601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 28418885 - 28418819
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| |||||||||||||||||||| |  ||||||||||| |||||||    
T  28418885 ggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaa 28418819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 28420211 - 28420277
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| |||||||||||||||||||| |  ||||||||||| |||||||    
T  28420211 ggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaa 28420277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 31845703 - 31845786
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||  |||| ||||||||||||||||||| || ||||||| |||| |||| |||||| || ||||||||||||| ||||||    
T  31845703 atcaaacagtttacattaaaataattaataggacctatggtggaccactcttaa-gttggttcaccatagacatttggggttaaa 31845786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 43202304 - 43202220
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||  |||||||| |||||| ||||||||||| ||||||| |||| ||||||||| ||||  ||||| |||||| ||||||    
T  43202304 atcaaacagtttaaatttaaataactaataggatctatggtggaccactcttaaggttgatccactatagatatttggggttaaa 43202220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 173
Target Start/End: Original strand, 13117540 - 13117603
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtcca 173  Q
    |||||||| || | |||||||||||||||||||||| || |||| ||||||||| |||||||||    
T  13117540 atcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtcca 13117603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 245 - 292
Target Start/End: Original strand, 45396060 - 45396107
Alignment:
Q  245 aaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||    
T  45396060 aaacgtgagtttttttagttatgggaccaaaatgaaaactgaaaatta 45396107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 17702312 - 17702378
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||| |||||||  ||||||||| |||||||||||||||||||| || |||||| |||| |||||||    
T  17702312 ggaccaaaacataggttttattagttatgggaccaaaatgaaaattggaaattaattaagggaccaa 17702378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 211706 - 211605
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||||||  | ||||||| | | |||| |||||||||| |  ||||||||| || ||||||||||||||||||   ||||||||||| ||| ||||    
T  211706 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaaa 211607  T
Q  307 tg 308  Q
    ||    
T  211606 tg 211605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 240550 - 240651
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||||||  | ||||||| | | |||| |||||||||| |  ||||||||| || ||||||||||||||||||   ||||||||||| ||| ||||    
T  240550 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaaa 240649  T
Q  307 tg 308  Q
    ||    
T  240650 tg 240651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 308
Target Start/End: Complemental strand, 725329 - 725228
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||||||  | ||||||| | | |||| |||||||||| |  ||||||||| || ||||||||||||||||||   ||||||||||| ||| ||||    
T  725329 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaaa 725230  T
Q  307 tg 308  Q
    ||    
T  725229 tg 725228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 793905 - 794006
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||||||  | ||||||| | | |||| |||||||||| |  ||||||||| || ||||||||||||||||||   ||||||||||| ||| ||||    
T  793905 ggatttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaattatttaagggatcaaa 794004  T
Q  307 tg 308  Q
    ||    
T  794005 tg 794006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 110 - 282
Target Start/End: Original strand, 8571524 - 8571697
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccag-ccaagg 208  Q
    |||||||  ||||||||||||   |||||| | | | ||||||| || |||||| ||||||||| ||||||||||||| |||||||||| ||| | | ||    
T  8571524 atcaaacagtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccatagacatttggggttaaacttaacagactaggg 8571623  T
Q  209 atttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaa 282  Q
    |||||||||  | ||||||| | |  | |||||| ||||| |  ||||||||| || |  ||||||||||||||    
T  8571624 atttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaa 8571697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 166 - 292
Target Start/End: Complemental strand, 28735142 - 28735014
Alignment:
Q  166 ttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaagga--ctaaaacatgagttttattact 263  Q
    ||||| ||| |||||||||||| ||||||||||  || |   |||||||||||| |||||  | ||| ||||  ||  | |||||||||||||||||| |    
T  28735142 ttggttcatgatagacatttggggttaaacttaatagtctcagatttatttgactgacgggaagacaattaagtgagaccaaaacatgagttttattaat 28735043  T
Q  264 tatgggaccaaaatgaaaactgaaaatta 292  Q
    ||||| ||||||||||| ||| |||||||    
T  28735042 tatggaaccaaaatgaacacttaaaatta 28735014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 254 - 295
Target Start/End: Original strand, 30787652 - 30787693
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattattt 295  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  30787652 ttttattaattatgggaccaaaatgaaaacttaaaattattt 30787693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 44076269 - 44076342
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||| | |||||||||||| |||||||| ||| | |||||||||| |||||| |||| |||| |||||||||    
T  44076269 atcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacat 44076342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 45281096 - 45281169
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| ||||||||||||  ||||||||||| | |||| || |||| |||||||||||||| | |||||||    
T  45281096 atcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttggtccaccgtagacat 45281169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 32797203 - 32797151
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||| || |||||||||||||||||||  ||||||||||| |||||||    
T  32797203 gttttattaattgtgggaccaaaatgaaaacttgaaattatttaagggaccaa 32797151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 32797300 - 32797260
Alignment:
Q  158 ttttaaggttggtccatcatagacatttggtgttaaactta 198  Q
    ||||||||||| |||||||||||||||||| ||||||||||    
T  32797300 ttttaaggttgatccatcatagacatttggagttaaactta 32797260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 282
Target Start/End: Complemental strand, 4810580 - 4810505
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaa 282  Q
    ||||||||||| || ||||||| | | || |||||| |||||||  ||||||||| ||||||||||||||| ||||    
T  4810580 ggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaaa 4810505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 30786741 - 30786690
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||| ||||| || ||||||||||||| |||||||||| ||||||||    
T  30786741 gttttattaattatgtgatcaaaatgaaaacttaaaattatttgaaggacca 30786690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Complemental strand, 32693895 - 32693844
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||| || ||||||||||||||||||| ||||||| ||| |||||||    
T  32693895 gttttattaattgtgggaccaaaatgaaaacttaaaattaattagaggacca 32693844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 178
Target Start/End: Original strand, 42878756 - 42878806
Alignment:
Q  128 aaataattaataggatctgtggtggatcacttttaaggttggtccatcata 178  Q
    |||||||||||||||||| ||||||| |||  |||||||||||||| ||||    
T  42878756 aaataattaataggatctatggtggaccacacttaaggttggtccaccata 42878806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Original strand, 34504677 - 34504730
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||| |||||||| ||||||||| ||||| ||| ||||| ||||||||||||||    
T  34504677 ggaccaaaacatgtgttttattagttatgagactaaaataaaaactgaaaatta 34504730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 42870892 - 42870835
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    |||||||||| |  ||||||||| || |||||||||||||||||||  ||||||||||    
T  42870892 ggactaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattta 42870835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 128 - 322
Target Start/End: Original strand, 1010291 - 1010484
Alignment:
Q  128 aaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggag 227  Q
    |||||||||||||||||| ||| ||| |||| |||||||||||||| |||| |||||||| |||||| ||| | | |  ||||||||||||| |||||||    
T  1010291 aaataattaataggatctatggcggaccactcttaaggttggtccaccatacacatttggggttaaagttaaccgtcg-ggatttatttgactgacggag 1010389  T
Q  228 acacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    ||| |  | | |||| |||||||||||||||||| ||||||||||||||| ||||||  |||||| |||| |||||||||| ||| |||||||||    
T  1010390 acaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaataaaaacttgaaattaattaagggaccaaatgacctattaagccta 1010484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 128 - 318
Target Start/End: Complemental strand, 8521444 - 8521255
Alignment:
Q  128 aaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggag 227  Q
    |||||||||||||||||| ||||||| || | |||||||||||||| |||| |||||||| |||||| ||| | | |  ||||||||||||| |||||||    
T  8521444 aaataattaataggatctatggtggaccattcttaaggttggtccaccatacacatttggggttaaagttaaccgtcg-ggatttatttgactgacggag 8521346  T
Q  228 acacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaag 318  Q
    ||| |  | | |||| |||||||||||||||||| ||||||||||||||||||||||  |||||| |||| |||||||||| ||| |||||    
T  8521345 acaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaagggaccaaatgacctattaag 8521255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 165 - 317
Target Start/End: Complemental strand, 32757978 - 32757826
Alignment:
Q  165 gttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactt 264  Q
    ||||||||| ||||||||||||| |||||| ||| || ||| ||||||||||||| | |||||    | || | |||| |||||||||||||||||| ||    
T  32757978 gttggtccaccatagacatttggggttaaagttaacacccatggatttatttgaccggcggaggtgaacttgagggaccaaaacatgagttttattattt 32757879  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaa 317  Q
    ||||||||||||||||||||| ||||||||| | |||||||||| ||| ||||    
T  32757878 atgggaccaaaatgaaaactggaaattatttgagggaccaaatgacctattaa 32757826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 110 - 295
Target Start/End: Complemental strand, 39604063 - 39603876
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaa 206  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||   ||||||| |||||||||| ||| | |    
T  39604063 atcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtc-a 39603965  T
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattt 295  Q
     |||||||||| || ||||||  | | || | |||| ||||| |  ||||||||| || ||||| |||||||||||||  |||||||||    
T  39603964 tgatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaacttgaaattattt 39603876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 40 - 304
Target Start/End: Complemental strand, 22048014 - 22047746
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntata--tcaaacgatttaaattaaaataattaa 137  Q
    |||||||||||||||||||  ||| ||||| ||||||||  |||| ||||||||||||||        | |  ||||||| ||||||||||||||||| |    
T  22048014 ttaggtgttgatggtacattgtaagataaaatagacctttctaattcaatggttctcttttcaaaaaaaaaaatcaaacggtttaaattaaaataattca 22047915  T
Q  138 taggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaaggatttatttgacagacggagacacagt 234  Q
    |||||| | ||||||| |||| ||||||||| |||| ||||||   ||||| | |||||||||| ||||| |||||||||||| || ||||||  | |      
T  22047914 taggatttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagcc-aggatttatttggcaaacggaggaaaaaa 22047816  T
Q  235 taaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    | | |||| ||||| |  ||||||||| || |||||||||||||||||||  |||||| |||| ||||||    
T  22047815 tgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattaattaagggacca 22047746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 206 - 321
Target Start/End: Original strand, 8523750 - 8523865
Alignment:
Q  206 aggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||||||| |||||||||| |  | |||||  |||||||||||||||||| ||||||||||||||||||||||  |||||| |||  |||||||    
T  8523750 aggatttatttgactgacggagacaaacatgaaggatcaaaacatgagttttattagttatgggaccaaaatgaaaacttgaaattaattaggggaccaa 8523849  T
Q  306 atgccctcttaagcct 321  Q
    ||| ||| ||||||||    
T  8523850 atgacctattaagcct 8523865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 1102826 - 1102742
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||| ||||||||||||||||||||| ||||| ||||||| |||| |||||||||||| | ||||||||||||| ||||||    
T  1102826 atcaaacggtttaaattaaaataattaataagatctatggtggaccactcttaaggttggtctaccatagacatttggggttaaa 1102742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 110 - 306
Target Start/End: Original strand, 22308707 - 22308903
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||| | |||| ||||||| | ||||||   ||| ||||||| |||| ||||||| |||||| ||||||||||||| |||||||||| || ||| |||    
T  22308707 atcaaatggtttacattaaaaaatttaataatgtctatggtggaccactcttaaggtaggtccaccatagacatttggggttaaacttaacaaccatgga 22308806  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||||| || ||||||  | |  | | ||||||||||    ||||||||| |||||||||||||||||||||   ||||||||||  ||||||||    
T  22308807 tttatttggcaaacggagcaaaatgtgagggactaaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaattatttaggggaccaaa 22308903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 205 - 321
Target Start/End: Original strand, 32759051 - 32759167
Alignment:
Q  205 aaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||||||||| |||||||    | || | |||| |||||||||||||||||| |||||| || ||||||||||||||||||||||| | ||||||    
T  32759051 aaggatttatttgaccgacggaggtgaacttgagggaccaaaacatgagttttattatttatggaactaaaatgaaaactgaaaattatttgagggacca 32759150  T
Q  305 aatgccctcttaagcct 321  Q
    |||| ||| ||||||||    
T  32759151 aatgacctattaagcct 32759167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 320
Target Start/End: Complemental strand, 9169738 - 9169584
Alignment:
Q  166 ttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacat-gagttttattactt 264  Q
    ||||||||  |||||||||||| |||||| ||| |  | | ||||||||||||| |||||||| ||| ||||| ||| ||||||| ||||||||||| ||    
T  9169738 ttggtccactatagacatttggggttaaagttaacttc-agggatttatttgaccgacggagagacaattaaaagaccaaaacatagagttttattaatt 9169640  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcc 320  Q
    ||||||| ||||||||||||  |||||| |||| || ||||||| ||| |||||||    
T  9169639 atgggactaaaatgaaaacttgaaattaattaaggggccaaatgacctattaagcc 9169584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 27705221 - 27705296
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  27705221 atatcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacat 27705296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 295
Target Start/End: Original strand, 30859078 - 30859265
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaa 206  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||| ||||||   ||||||| |||||||||| | | |||    
T  30859078 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaa 30859177  T
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattt 295  Q
     || ||||||| || || |||  | |  | | ||||| |||| |  ||||||||| || |||||||||||||||||||  |||||||||    
T  30859178 -gacttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaacttgaaattattt 30859265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 320
Target Start/End: Complemental strand, 1009375 - 1009182
Alignment:
Q  128 aaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacattt---ggtgttaaacttaccagccaaggatttatttgacagacg 224  Q
    |||||||||||||||||| ||||||| |||| |||||||||||||| |||| ||||||   || || ||| ||| |   |||| ||||||||||| || |    
T  1009375 aaataattaataggatctatggtggaccactcttaaggttggtccaccata-acattttggggggtaaaagttaactatcaag-atttatttgactgatg 1009278  T
Q  225 gagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcc 320  Q
    |||||| |  | ||| || |||||||||||||||||| |||||| |||||||||||||||  |||||| |||  | |||||||| ||| |||||||    
T  1009277 gagacaaacatgaagaaccaaaacatgagttttattagttatggaaccaaaatgaaaacttgaaattaattagggaaccaaatgacctattaagcc 1009182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 214 - 325
Target Start/End: Complemental strand, 26047917 - 26047806
Alignment:
Q  214 tttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctc 313  Q
    ||||||||||||||  ||| || | ||||||||||||||||||||||| ||||| ||||||||| |||| |  |||||| ||| ||||||||||| |||     
T  26047917 tttgacagacggagggacaattgagggactaaaacatgagttttattagttatgagaccaaaataaaaatttgaaattaattagaggaccaaatgaccta 26047818  T
Q  314 ttaagcctatat 325  Q
    |||| |||||||    
T  26047817 ttaaacctatat 26047806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 183
Target Start/End: Complemental strand, 30911017 - 30910878
Alignment:
Q  44 gtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaataggat 143  Q
    |||||| ||||||||| ||| ||||| ||||| | | |||| ||||||||||||||        |  ||||||| || ||||||||||||||||||||||    
T  30911017 gtgttggtggtacatcgtaagataaaatagacatgcctaattcaatggttctcttttaaagaaaaactcaaacggttgaaattaaaataattaataggat 30910918  T
Q  144 ctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    || ||||||| |||| |||||||||||||| || ||||||    
T  30910917 ctatggtggaccactcttaaggttggtccaccaaagacat 30910878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 33173913 - 33173975
Alignment:
Q  155 cacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttg 217  Q
    |||| |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||    
T  33173913 cactcttaaggttggtccaccatagacatttggggttaaacttaacagccaaggatttatttg 33173975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 155 - 304
Target Start/End: Complemental strand, 30857962 - 30857814
Alignment:
Q  155 cacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagt 254  Q
    |||||||||||||||||||||||||||||||   |||||| ||| | |  ||| |||||||||||| | ||||  | |  | |||||| |||||||  ||    
T  30857962 cacttttaaggttggtccatcatagacatttaaagttaaagttaactgttaag-atttatttgacaaaaggaggaaaatctgaaggaccaaaacatacgt 30857864  T
Q  255 tttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||| || ||||||||||||||||||| ||||||| ||| |||||||    
T  30857863 tttattaattgtgggaccaaaatgaaaacttaaaattaattagaggacca 30857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 4127161 - 4127245
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||| | ||||||||||| ||||||| ||||||| ||||||| |||||||||| ||| || ||||||||||||||| ||||||    
T  4127161 atcaaatggtttaaattaaattaattaacaggatctatggtggaccacttttaagattgatctatcatagacatttggggttaaa 4127245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 11262601 - 11262532
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatag 179  Q
    |||||| | ||||||||| ||||||||||||||||| ||||||| |||| |||||||||||||| |||||    
T  11262601 atcaaatggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccaccatag 11262532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 305
Target Start/End: Original strand, 34899003 - 34899054
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||||||||||||||||||||||| ||||||||| |||| |||||||    
T  34899003 ttttattacttatgggaccaaaatgaaaaatgaaaattaattaagggaccaa 34899054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 110 - 304
Target Start/End: Original strand, 325094 - 325287
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| || ||||||| | |||||||| | |||  | |||| |||| |||||||||||||| ||||||||||| | |||||| ||| ||| |  |||    
T  325094 atcaaacggttaaaattaacaaaattaataaggtctacgatggaccactattaaggttggtccaccatagacatttagagttaaagttaacagtc-ggga 325192  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |||||||| || ||||||  | | || | |||| ||||  |  ||||||||| || |||||||||||||||||||  ||||||||| | ||||||    
T  325193 tttatttggcaaacggaggaaaacttgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgagggacca 325287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 10735971 - 10735887
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||| ||| ||||||||||||||||||||| ||||| |||||||   || |||| ||||||||| |||||| |||||| ||||||    
T  10735971 atcagacggtttaaattaaaataattaatatgatctatggtggactgctgttaacgttggtccaccatagatatttggagttaaa 10735887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 13520640 - 13520695
Alignment:
Q  44 gtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctcttt 99  Q
    |||||| || |||||||||| ||||| |||||||||||||||||| ||||||||||    
T  13520640 gtgttggtgatacatcataagataaaatagaccttcgtaatccaacggttctcttt 13520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 252 - 323
Target Start/End: Original strand, 23334017 - 23334088
Alignment:
Q  252 agttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcctat 323  Q
    |||||||  |||||||||||||||||| ||||| | ||||||||| ||||||||||| ||  ||||||||||    
T  23334017 agttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatgtccaattaagcctat 23334088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 23325980 - 23325922
Alignment:
Q  250 tgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    |||||||||  |||||||||||||||||| ||||| | ||||||||| |||||||||||    
T  23325980 tgagttttacaacttatgggaccaaaatgtaaactcataattatttagaggaccaaatg 23325922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 253 - 326
Target Start/End: Original strand, 10978330 - 10978403
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcctatatt 326  Q
    ||||||||| |||| ||||||||||||||| || |||||| |||  ||||||||||  || |||||||||||||    
T  10978330 gttttattatttataggaccaaaatgaaaattggaaattaattaggggaccaaatgatctattaagcctatatt 10978403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 307
Target Start/End: Original strand, 11846308 - 11846376
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    |||||||||||  | |||||||| ||||| ||||||||||||| ||| |||||| |||| |||||||||    
T  11846308 ggactaaaacaaaatttttattagttatgagaccaaaatgaaacctgtaaattaattaagggaccaaat 11846376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 296
Target Start/End: Original strand, 22049111 - 22049230
Alignment:
Q  176 atagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaa 275  Q
    |||||||||||| |||||||||| |||| | ||||||||||| || || |||  | |  | | |||| ||||| |  ||||||||| |||||||||||||    
T  22049111 atagacatttggggttaaacttaacagc-agggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaa 22049209  T
Q  276 atgaaaactgaaaattattta 296  Q
    |||||||||  ||||||||||    
T  22049210 atgaaaacttgaaattattta 22049230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 24503249 - 24503197
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||||||||||||||||||||||| ||  ||||| |||| |||||||    
T  24503249 gttttattacttatgggaccaaaatgaaaattggtaattaattaagggaccaa 24503197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 24509087 - 24509138
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |||||||||||||||||||||||||||||| ||  ||||| |||| ||||||    
T  24509087 gttttattacttatgggaccaaaatgaaaattggtaattaattaagggacca 24509138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 254 - 305
Target Start/End: Complemental strand, 34894213 - 34894162
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||||| |||||||||||||||| || |||||| |||| |||||||    
T  34894213 ttttattacttacgggaccaaaatgaaaaatggaaattaattaagggaccaa 34894162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 11796648 - 11796566
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcct 321  Q
    |||| |||| ||||||||||  | |||||||||||||||| ||||| | |||||||||  |||||||||| ||  ||||||||    
T  11796648 ggaccaaaatatgagttttacaatttatgggaccaaaatgtaaactcataattatttaggggaccaaatgtccaattaagcct 11796566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 186
Target Start/End: Original strand, 9220365 - 9220444
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcac---ttttaaggttggtccatcatagacatttg 186  Q
    |||||||| ||||||||||||||||||||| ||| | ||| ||| |||   | |||| ||||||||| ||||||||||||    
T  9220365 atcaaacggtttaaattaaaataattaataagatttatgggggaccactcttcttaatgttggtccaccatagacatttg 9220444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 227
Target Start/End: Complemental strand, 15548451 - 15548328
Alignment:
Q  110 atcaaacgatttaaattaaaataat----taataggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccag 202  Q
    |||||| | ||||||||||||||||    ||||||||| | |||||||||| | |||||||||||||| || |||   ||||| | |||||||||| |||    
T  15548451 atcaaatggtttaaattaaaataattaattaataggatttatggtggatcattcttaaggttggtccaccagagacatcatttagggttaaacttaacag 15548352  T
Q  203 ccaaggatttatttgacagacggag 227  Q
     | |||||||||||| || ||||||    
T  15548351 gc-aggatttatttggcaaacggag 15548328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 17420494 - 17420526
Alignment:
Q  110 atcaaacgatttaaattaaaataattaatagga 142  Q
    ||||||| |||||||||||||||||||||||||    
T  17420494 atcaaacaatttaaattaaaataattaatagga 17420526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 36898815 - 36898867
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggt 92  Q
    |||||||||| ||||||||| ||| ||||| ||||| | ||||||||||||||    
T  36898815 ttaggtgttggtggtacatcgtaagataaaatagacatgcgtaatccaatggt 36898867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 36898889 - 36898957
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcata 178  Q
    |||||| | |||||| |||||||||||| || |||| |||||||  |||||||||||||| ||| ||||    
T  36898889 atcaaagggtttaaactaaaataattaacagaatctatggtggactacttttaaggttgggccaccata 36898957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 114 - 322
Target Start/End: Complemental strand, 127637 - 127429
Alignment:
Q  114 aacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggattta 213  Q
    |||| ||||||||||||  ||||||||||||| ||||||| |||| ||||||||| | || ||||||||||||  |||||| ||| | | || |||||||    
T  127637 aacggtttaaattaaaaacattaataggatctatggtggaccactcttaaggttgtttcaccatagacatttgaggttaaagttaactgtcagggattta 127538  T
Q  214 tttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctc 313  Q
    |||||| ||||||| || |  | | |||| |||||||||||||||||| |||||||||||||| |||||||  |||||| |||  |||||||||| |||     
T  127537 tttgaccgacggaggcaaacatgagggaccaaaacatgagttttattagttatgggaccaaaacgaaaacttgaaattaattaggggaccaaatgaccta 127438  T
Q  314 ttaagccta 322  Q
    |||||||||    
T  127437 ttaagccta 127429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 128594 - 128711
Alignment:
Q  205 aaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |||||||| |||||| |||||||||| | |||| |||| |||||||||||||||||| | || ||||||||||||||||| ||||||| |||| ||||||    
T  128594 aaggatttttttgaccgacggagacaaatttaagggaccaaaacatgagttttattagtaataggaccaaaatgaaaacttaaaattaattaagggacca 128693  T
Q  305 aatgccctcttaagccta 322  Q
    |||| ||| |||||||||    
T  128694 aatgacctattaagccta 128711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1251 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold1251
Description:

Target: scaffold1251; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 165 - 322
Target Start/End: Original strand, 1048 - 1205
Alignment:
Q  165 gttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactt 264  Q
    ||||||||| ||||||||||||| |||||| ||| || ||| | ||||||||||| |||||||    | || | |||| |||||||||||||||||||||    
T  1048 gttggtccaccatagacatttggggttaaagttaacacccatgaatttatttgactgacggaggtgaatttgagggaccaaaacatgagttttattactt 1147  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    ||||||||||||||||||||| ||||||||| | |||||||||| ||| |||||||||    
T  1148 atgggaccaaaatgaaaactggaaattatttgagggaccaaatgacctattaagccta 1205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 2e-29; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 119 - 317
Target Start/End: Original strand, 20288141 - 20288339
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    |||||||||||  |||||||| | ||| |||||||  |  | ||| ||||||||| ||||||||||||| |||||||||| ||| || ||||||||||||    
T  20288141 tttaaattaaataaattaataaggtctatggtggaatatctataatgttggtccaccatagacatttggagttaaacttaacagtcagggatttatttga 20288240  T
Q  219 cagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaa 317  Q
    |  || |||||| | || | |||| || ||||||||||||||| |||||||| ||||||||||||| ||||||| |||  |||||||||| ||| ||||    
T  20288241 ctaacagagacaaacttgagggaccaacacatgagttttattaattatgggatcaaaatgaaaactaaaaattaattaggggaccaaatggcctattaa 20288339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 40 - 305
Target Start/End: Complemental strand, 3208763 - 3208497
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntata-tcaaacgatttaaattaaaataattaat 138  Q
    |||||||||||||||||||| ||| ||||||||||| | | || |||||||||||| |||       || | ||||||| ||||||||| ||||||||||    
T  3208763 ttaggtgttgatggtacatcgtaagataaattagacttgccta-tccaatggttctatttttaaaaataaaatcaaacggtttaaattataataattaat 3208665  T
Q  139 aggatctgtggtggatcacttttaaggttggtccatcata--gacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagtta 236  Q
    ||||| | ||||||| |||| |||||||||||||| ||||    ||||||| |||||||||| | |  |||||||||||||||| ||||||  | |  ||    
T  3208664 aggatttatggtggaccactcttaaggttggtccaccataatatcatttggggttaaacttaac-ggtaaggatttatttgacaaacggaggaaaaaata 3208566  T
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    | |||  ||||| |  ||||||||| |||||||||||||||||||| || |||||| ||| ||||||||    
T  3208565 agggatcaaaacgtacgttttattaattatgggaccaaaatgaaaaatggaaattaattagaggaccaa 3208497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 119 - 302
Target Start/End: Original strand, 28909524 - 28909705
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    |||||||||||| |||||||||||||| ||||||| ||   |||||  |||| || || ||| |||||| ||||||||||  || ||  |||||||||||    
T  28909524 tttaaattaaaaaaattaataggatctatggtggaccaaccttaagagtggttcaccacagatatttggggttaaactta--agtcagagatttatttga 28909621  T
Q  219 cagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggac 302  Q
    |  ||||||||| |  | | |||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||| |||||    
T  28909622 ccaacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaactgaaaattaattagaggac 28909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 128 - 322
Target Start/End: Original strand, 3455550 - 3455745
Alignment:
Q  128 aaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacattt---ggtgttaaacttaccagccaaggatttatttgacagacg 224  Q
    |||||||||||| ||||| ||||||| |||| |||||||||||||| |||| ||||||   || |||||| ||| | | || ||||||||||||| ||||    
T  3455550 aaataattaatatgatctatggtggaccactcttaaggttggtccaccata-acattttggggggttaaagttaactgtca-ggatttatttgactgacg 3455647  T
Q  225 gagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    |||||| |  | |||||| |||||||||||||||||| ||||| ||||||||||||||||  |||||| ||   |||||||||| ||| |||||||||    
T  3455648 gagacaaacatgaaggaccaaaacatgagttttattagttatgagaccaaaatgaaaacttgaaattaattcggggaccaaatgacctattaagccta 3455745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 110 - 296
Target Start/End: Complemental strand, 42685084 - 42684898
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| |||||||||||| | |||||| | | | ||||||| |||| ||||| ||||| || ||||||||||||| |||||||||| ||| ||||||    
T  42685084 atcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccatagacatttggggttaaacttaacagtcaagga 42684985  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattattta 296  Q
    ||||||||  | ||  ||| | |  | | |||||||||| | |||||||||  |||||| ||||||||||||||| |||||||||||    
T  42684984 tttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatgaaaacttaaaattattta 42684898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 37735385 - 37735319
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  37735385 ggactaaaacatacgttttattaattatgggaccaaaatgaaaacttaaaattatttaaaggaccaa 37735319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 26886551 - 26886421
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||| ||| ||||| ||||| | | |||||||||||||| ||||        | |||||||| |||||||||||||||||||||    
T  26886551 ttaggtgttggtggtacatcgtaagataaaatagacatgcataatccaatggttcccttttaaaaaaaaaatcaaacggtttaaattaaaataattaata 26886452  T
Q  140 ggatctgtggtggatcacttttaaggttggt 170  Q
    |||| | ||||||| |||| |||||||||||    
T  26886451 ggatttatggtggaccactcttaaggttggt 26886421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 10301142 - 10301066
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    |||||||  ||||||||||||||||||||||||||| |||||||||||| ||||||||||| || |||||| |||||    
T  10301142 atcaaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccatagatatttg 10301066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 38242423 - 38242496
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| |||||||||||||||||||||| || | ||||||| |||| |||||||||||||| |||||||||    
T  38242423 atcaaacggtttaaattaaaataattaatagaatttatggtggaccactcttaaggttggtccaccatagacat 38242496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 14745108 - 14745192
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||  ||||||||||||||||||||||||||| ||||| | |||| |||||||||||||| || ||| |||||| ||||||    
T  14745108 atcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccaccacagatatttggggttaaa 14745192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 203
Target Start/End: Original strand, 34819122 - 34819288
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||| ||||| ||||| ||||| | | ||||||||||||||| |||        | | |||||  ||||||||||||||| |||||    
T  34819122 ttaggtgttggtggtacaccataagataaaatagacttgcctaatccaatggttctttttttataaaaaaaacaaacagtttaaattaaaataagtaata 34819221  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagc 203  Q
    |||||| ||||||| |||| ||||||||| ||||  |||||   ||||||| |||||||||| ||||    
T  34819222 ggatctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaacagc 34819288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 183
Target Start/End: Complemental strand, 35371187 - 35371043
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntata-tcaaacgatttaaattaaaataattaat 138  Q
    |||||||||| ||||||||| ||| ||||| ||||| | | |||||||||||||||||||        | | |||||   || |||||||||||||||||    
T  35371187 ttaggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatggttctctttttaaaaaaaaaatcaaaaagttaaaattaaaataattaat 35371088  T
Q  139 aggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    ||||||| ||||||| |||| |||||||||||||| |||| ||||    
T  35371087 aggatctatggtggaccactcttaaggttggtccaccataaacat 35371043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 108 - 187
Target Start/End: Complemental strand, 49379912 - 49379833
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||||  ||||||||| ||||||||||||||||| ||||||| || |||||| || |||||| |||||||||||||    
T  49379912 atatcaaacagtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacatttgg 49379833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 10338934 - 10338873
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||||||||||||||||||| ||||||| |||| ||||||||||| ||| ||||||||    
T  10338934 aaattaaaataattaataggatctatggtggaccactcttaaggttggttcattatagacat 10338873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 183
Target Start/End: Original strand, 27841545 - 27841690
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnnt--atatcaaacgatttaaattaaaataattaa 137  Q
    |||||||||| ||||||||| ||| ||||| ||||| | | ||||||||| |||||||||       |  | |||||||  || |||||||||||||||     
T  27841545 ttaggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatagttctcttttttttttttaaaatcaaacagttaaaattaaaataattat 27841644  T
Q  138 taggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| ||||||| |||| |||||||||||||| |||| ||||    
T  27841645 taggatctatggtggaccactcttaaggttggtccaccataaacat 27841690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 207 - 308
Target Start/End: Original strand, 43174711 - 43174812
Alignment:
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    ||||||||||||  |||||||| | | || | |||| |||||||||||||||||| |||||||  ||||||||||||| |||||||  ||| ||||||||    
T  43174711 ggatttatttgattgacggagatagatttgagggaccaaaacatgagttttattagttatggggtcaaaatgaaaacttaaaattaaataagggaccaaa 43174810  T
Q  307 tg 308  Q
    ||    
T  43174811 tg 43174812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 282
Target Start/End: Complemental strand, 53420525 - 53420352
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccag-ccaagg 208  Q
    |||||||  ||||||||||||   |||||| | ||| ||||||||||||||||| ||||||||| ||||||||||||  ||||||||||  || | | ||    
T  53420525 atcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatagacatttgtggttaaacttaatagactaggg 53420426  T
Q  209 atttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaa 282  Q
    |||||||||| | ||||||| | |  | | |||| ||||| |  ||||||||| || | |||||||||||||||    
T  53420425 atttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaaatgaaaa 53420352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 48083426 - 48083359
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    ||||||||||||||||||||||||||| |||| || |||| |||||||| || || ||||||||||||    
T  48083426 tttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccatagacatttg 48083359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 53194520 - 53194595
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacattt 185  Q
    |||||||| |||||| ||||||||||||||| |||| |||||||||||||||||| || ||| | |||||| ||||    
T  53194520 atcaaacggtttaaaataaaataattaatagaatctatggtggatcacttttaagatttgtctaccatagatattt 53194595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 113 - 187
Target Start/End: Complemental strand, 13621125 - 13621051
Alignment:
Q  113 aaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    ||||| ||||||||| ||||||||||||||||| ||||||| || |||| | || |||||| |||||||||||||    
T  13621125 aaacggtttaaattagaataattaataggatctatggtggaccattttttaagtcggtccaccatagacatttgg 13621051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 18442331 - 18442265
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| || |||||||||||||||||||  |||||||||| ||||||||    
T  18442331 ggactaaaacgtgggttttattaattgtgggaccaaaatgaaaacttgaaattatttagaggaccaa 18442265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 19487405 - 19487339
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| || |||||||||||||||||||  |||||||||| ||||||||    
T  19487405 ggactaaaacgtgggttttattaattgtgggaccaaaatgaaaacttgaaattatttagaggaccaa 19487339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 41264490 - 41264601
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||| ||| ||||| ||||||| | |||| ||||||||||||||        | |||||||| |  ||||||||||||||||||    
T  41264490 ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttaaaaaaaaatcaaacggtcgaaattaaaataattaata 41264589  T
Q  140 ggatctgtggtg 151  Q
    |||||| |||||    
T  41264590 ggatctatggtg 41264601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 50809500 - 50809434
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| |||||||||||||||||||| |  ||||||||||| |||||||    
T  50809500 ggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaa 50809434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 50810871 - 50810937
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| |||||||||||||||||||| |  ||||||||||| |||||||    
T  50810871 ggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaa 50810937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Complemental strand, 50864993 - 50864927
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| |||||||||||||||||||| |  ||||||||||| |||||||    
T  50864993 ggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaa 50864927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 50866362 - 50866428
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| || ||||||||| |||||||||||||||||||| |  ||||||||||| |||||||    
T  50866362 ggactaaaacgtgtgttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaa 50866428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 10732048 - 10732109
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||||||||||||||||||| ||||||| | || | |||||||||||| |||||||||    
T  10732048 aaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccatagacat 10732109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 20336574 - 20336685
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    |||||||||||  |||||||| | ||| |||||||  |  | ||| ||||||||| ||||||||||||| |||||||||| ||| || | ||||||||||    
T  20336574 tttaaattaaataaattaataaggtctatggtggactatctataatgttggtccaacatagacatttggagttaaacttaacagtcatgaatttatttga 20336673  T
Q  219 cagacggagaca 230  Q
    |  |||||||||    
T  20336674 ctaacggagaca 20336685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 122 - 184
Target Start/End: Original strand, 53614192 - 53614254
Alignment:
Q  122 aaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatt 184  Q
    ||||||||||||||| |||||||| ||||||| |||| |||||| || |||| ||||||||||    
T  53614192 aaattaaaataattactaggatctatggtggaccactcttaaggatgatccaccatagacatt 53614254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 228
Target Start/End: Complemental strand, 36175461 - 36175353
Alignment:
Q  119 tttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttga 218  Q
    |||||||||||  |||||||||||| | |||||||  |  | ||| |||| |||||||||||||||||| |||||||||| ||| |  |||||||||||     
T  36175461 tttaaattaaagaaattaataggatatatggtggactatatataatgttgatccatcatagacatttggggttaaacttaacagtc-cggatttatttgg 36175363  T
Q  219 cagacggaga 228  Q
    || |||||||    
T  36175362 caaacggaga 36175353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 20336693 - 20336749
Alignment:
Q  267 gggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcctat 323  Q
    |||||||||||||||||||||||||| |||  |||||||||| |||  |||||||||    
T  20336693 gggaccaaaatgaaaactgaaaattaattaggggaccaaatgacctagtaagcctat 20336749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 165 - 305
Target Start/End: Complemental strand, 38241058 - 38240919
Alignment:
Q  165 gttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattactt 264  Q
    |||||| || ||||||||||||| |||||||||| |||||  ||||||||||| || ||||||  | |  | ||||||| |||| |  ||||||||| ||    
T  38241058 gttggttcaccatagacatttggagttaaacttaacagcc-gggatttatttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaatt 38240960  T
Q  265 atgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
     |||||||||||| |||| |  |||||||| || |||||||    
T  38240959 gtgggaccaaaataaaaatttgaaattattcaagggaccaa 38240919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 3209982 - 3210033
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||||| || ||||||||||||||||| | |||||||||||| ||||||    
T  3209982 gttttattaattgtgggaccaaaatgaaaatttaaaattatttaagggacca 3210033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 322
Target Start/End: Complemental strand, 43173960 - 43173882
Alignment:
Q  244 aaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagccta 322  Q
    ||||||||| |||||||| |||||||  ||||||||||| || |||||| |||  ||| |||||| ||| |||||||||    
T  43173960 aaaacatgaattttattagttatggggacaaaatgaaaattggaaattaattaggggatcaaatgacctattaagccta 43173882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 54110192 - 54110233
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtgg 152  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  54110192 atcaaacgatttaaattaaaa-aattaataggatctatggtgg 54110233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 12108034 - 12108083
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggac 302  Q
    ||||||||| || |||||||||||||||||||  ||||||||||| ||||    
T  12108034 gttttattagttgtgggaccaaaatgaaaacttgaaattatttaagggac 12108083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 219
Target Start/End: Original strand, 20314672 - 20314781
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||| | |||||||||||  |||||||| | ||| |||||||  |  | ||| ||||||| | ||||||||||||| |||||||||| ||| || | |    
T  20314672 atcaaatggtttaaattaaataaattaataaggtctatggtggactatctataatgttggtctaacatagacatttggagttaaacttaacagtcatgaa 20314771  T
Q  210 tttatttgac 219  Q
    ||||||||||    
T  20314772 tttatttgac 20314781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 294
Target Start/End: Original strand, 53194921 - 53194962
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatt 294  Q
    ||||||||| ||||||||||||||||||||||  ||||||||    
T  53194921 gttttattaattatgggaccaaaatgaaaacttgaaattatt 53194962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 284
Target Start/End: Original strand, 55328342 - 55328387
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaact 284  Q
    |||||||||||||| |||||||| ||||| || |||||||||||||    
T  55328342 ggactaaaacatgaattttattaattatgagatcaaaatgaaaact 55328387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 5123383 - 5123423
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatga 279  Q
    |||||||||| |||||||||||| |||| ||||||||||||    
T  5123383 ggactaaaacgtgagttttattagttatcggaccaaaatga 5123423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 12107887 - 12107954
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcata 178  Q
    |||||||| |||| ||||||| ||  |||||| ||| ||||||| ||||||||||||||||||| ||||    
T  12107887 atcaaacggtttatattaaaaaaaa-aatagggtctatggtggaccacttttaaggttggtccaccata 12107954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 38247527 - 38247579
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||||||||  |||||||||||||| || |||||| |||| |||||||    
T  38247527 gttttattacttatatgaccaaaatgaaaattggaaattaattaagggaccaa 38247579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 40244252 - 40244200
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||| || || ||||||||||||||||  ||||||||||| |||||||    
T  40244252 gttttattaattgtgagaccaaaatgaaaacttgaaattatttaagggaccaa 40244200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 41544723 - 41544675
Alignment:
Q  257 tattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||| |||| |||||||||||||||||  ||||||||||| |||||||    
T  41544723 tattaattataggaccaaaatgaaaacttgaaattatttaatggaccaa 41544675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 6e-29; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 158 - 303
Target Start/End: Complemental strand, 7310435 - 7310291
Alignment:
Q  158 ttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagtttt 257  Q
    ||||||||||||| || ||||||||||||| |||||||||| ||||| || |||||||||  | ||||||| | |  | ||||||| ||||||  |||||    
T  7310435 ttttaaggttggttcaccatagacatttggagttaaacttaacagccgag-atttatttggtaaacggagaaaaacctgaaggacttaaacatacgtttt 7310337  T
Q  258 attacttatgggaccaaaatgaaaactgaaaattatttaaaggacc 303  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||    
T  7310336 attaattatgggaccaaaatgaaaacttaaaattatttaaaggacc 7310291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 308
Target Start/End: Complemental strand, 16208633 - 16208534
Alignment:
Q  209 atttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatg 308  Q
    |||| ||||||||||  ||||||||||||||||| ||||||||| ||||||||  |||||||||||||| |||| |||||||||||||| ||||||||||    
T  16208633 atttttttgacagactaagacacagttaaaggaccaaaacatgacttttattagatatgggaccaaaataaaaattgaaaattatttaagggaccaaatg 16208534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 282
Target Start/End: Original strand, 29381542 - 29381810
Alignment:
Q  15 agaagatgaagaaaaggnnnnnnnnttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaa 114  Q
    |||||||||||||||||        |||| ||||| ||||||||| ||| ||||| ||||||| | ||||||||||||| |||||        | |||||    
T  29381542 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatctttttgaaaaaaaatcaa 29381641  T
Q  115 acgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcataga---catttggtgttaaacttaccagccaaggatt 211  Q
    ||| || |||||||||||||||||||||||| |||||||||||| |||||||| ||||| || |||   ||||||| |||||||||| | |    |||||    
T  29381642 acggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaactg--ttggatt 29381739  T
Q  212 tatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaa 282  Q
    ||||||  | ||||||  | || | |||||||||||| | | |||||||| || ||||| |||||||||||    
T  29381740 tatttggtaaacggaggaaaagatgaaggactaaaacgtcatttttattaattgtgggatcaaaatgaaaa 29381810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 40 - 283
Target Start/End: Original strand, 5187459 - 5187703
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    ||||||||||||||||||| |||| ||||| |||| || | |||||||||| | ||||||        | |||||||  || ||||||| ||||||||||    
T  5187459 ttaggtgttgatggtacatgataagataaaatagagctgcttaatccaatgatgctcttttaaaataaaaatcaaacagttgaaattaatataattaata 5187558  T
Q  140 ggatctgtggtggatcacttttaaggttggtccatcatagaca---tttggtgttaaacttaccagccaaggatttatttgacagacggagacacagtta 236  Q
    |||||| ||||| | |||||||||||||||||||  |||||||   ||||| |||||||||| | | || ||||||||||| || ||||| | | || ||    
T  5187559 ggatctatggtgaaccacttttaaggttggtccactatagacaacatttgg-gttaaacttaaccgtca-ggatttatttggcaaacggacaaaaaggta 5187656  T
Q  237 aaggactaaaacatgagttttattacttatgggaccaaaatgaaaac 283  Q
    | | ||||||||   | |||||||| |||||||||||||||||||||    
T  5187657 aggaactaaaacgccatttttattaattatgggaccaaaatgaaaac 5187703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 246 - 325
Target Start/End: Original strand, 7308491 - 7308570
Alignment:
Q  246 aacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcctatat 325  Q
    ||||||||||||||||||||| |||||||||||||||||  |||||| |||| || ||||||| ||| ||||||||||||    
T  7308491 aacatgagttttattacttataggaccaaaatgaaaacttgaaattaattaaggggccaaatgacctattaagcctatat 7308570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 15 - 183
Target Start/End: Complemental strand, 17837920 - 17837752
Alignment:
Q  15 agaagatgaagaaaaggnnnnnnnnttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaa 114  Q
    |||||||||||||||||        |||| ||||| ||||||||| ||| ||||| ||||||| | ||||||||||||| || ||        | |||||    
T  17837920 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatcgtttttaagaaaaatcaa 17837821  T
Q  115 acgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    ||| || |||||||||||||||||||||||| ||||||| |||| |||| ||| ||||| |||||||||    
T  17837820 acggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacat 17837752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 308
Target Start/End: Complemental strand, 23392425 - 23392224
Alignment:
Q  108 atatcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatag--acatttggtgttaaacttaccagcca 205  Q
    |||||||||| || |||||||||||||||||||||||| ||||||| |||||||||||||| |||| | |||   ||||||| |||||||||| ||        
T  23392425 atatcaaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccttagcatcatttggggttaaacttaaca-ttt 23392327  T
Q  206 aggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||||| || ||||||  | || | | ||||| ||||   | |||||||| || ||||||||||||||||||   ||||||  ||| |||||||    
T  23392326 aggatttatttggcaaacggaggaaaaggtgagggacttaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaataagggaccaa 23392227  T
Q  306 atg 308  Q
    |||    
T  23392226 atg 23392224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 7311632 - 7311705
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||| ||||||||||||||||||||||||| | ||||||| |||| ||||||||||| || |||||||||    
T  7311632 atcaaacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccatagacat 7311705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 110 - 187
Target Start/End: Complemental strand, 11722994 - 11722917
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttgg 187  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||| || |||||| || |||||| |||||||||||||    
T  11722994 atcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacatttgg 11722917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 155 - 283
Target Start/End: Original strand, 32506979 - 32507107
Alignment:
Q  155 cacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaaacatgagt 254  Q
    |||| |||||||||||||| |||||| |||||| |||||||||| ||| |||||||||||||| || || |||| | |  | | |||||||||||  | |    
T  32506979 cactcttaaggttggtccaccatagatatttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgagggactaaaacaccatt 32507078  T
Q  255 tttattacttatgggaccaaaatgaaaac 283  Q
    |||||||  | ||||| ||||||||||||    
T  32507079 tttattaaatgtgggatcaaaatgaaaac 32507107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 239 - 305
Target Start/End: Original strand, 233601 - 233667
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    |||||||||| ||  |||||||| |||||||||||||||||||| |  |||||||||||||||||||    
T  233601 ggactaaaacgtgttttttattaattatgggaccaaaatgaaaaattgaaattatttaaaggaccaa 233667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 170
Target Start/End: Original strand, 18346588 - 18346717
Alignment:
Q  40 ttaggtgttgatggtacatcataaaataaattagaccttcgtaatccaatggttctctttnnnnnnntatatcaaacgatttaaattaaaataattaata 139  Q
    |||||||||| ||||||||| ||| ||||| ||||| | | |||||||||||||  ||||        | |||||||| |||||||||||||||||||||    
T  18346588 ttaggtgttggtggtacatcgtaagataaaatagacttgcataatccaatggtttacttttaaaaaaaa-atcaaacggtttaaattaaaataattaata 18346686  T
Q  140 ggatctgtggtggatcacttttaaggttggt 170  Q
    |||| | | ||||| |||| |||||||||||    
T  18346687 ggatttatagtggaccactcttaaggttggt 18346717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 232241 - 232189
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||| |||||||||||||||||||| |  ||||||||||| |||||||    
T  232241 gttttattaattatgggaccaaaatgaaaaattgaaattatttaagggaccaa 232189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 305
Target Start/End: Original strand, 6452562 - 6452614
Alignment:
Q  253 gttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||  |||||||    
T  6452562 gttttattaattatgggaccaaaatgaaaacttgaaattatttaggggaccaa 6452614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 186
Target Start/End: Complemental strand, 11967424 - 11967348
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttg 186  Q
    |||||||  ||||||||||||||||||||| ||||| || |||| | || | ||||||||||||  |||||||||||    
T  11967424 atcaaacagtttaaattaaaataattaatatgatctatgatggacccctctcaaggttggtccacaatagacatttg 11967348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 12780610 - 12780538
Alignment:
Q  235 taaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    |||| ||||||||||||| |||||||| |||||||| ||| || |||||| ||||||| |||| ||| |||||    
T  12780610 taaatgactaaaacatgaattttattaattatgggatcaacataaaaactaaaaattaattaagggatcaaat 12780538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 12784789 - 12784717
Alignment:
Q  235 taaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    |||||||||||||||||| |||||||| ||||| |||||| || ||| || ||||||| |||| ||| |||||    
T  12784789 taaaggactaaaacatgaattttattaattatgagaccaacataaaatctaaaaattaattaagggatcaaat 12784717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 35037197 - 35037145
Alignment:
Q  254 ttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    |||||| | ||||| |||||||||||||||||||||||| ||| |||||||||    
T  35037197 ttttatgagttatgagaccaaaatgaaaactgaaaattaattagaggaccaaa 35037145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 255 - 304
Target Start/End: Original strand, 7311777 - 7311826
Alignment:
Q  255 tttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    ||||||| || ||||| ||||||||||||| |||||||||||| ||||||    
T  7311777 tttattaattgtgggatcaaaatgaaaacttaaaattatttaagggacca 7311826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 218
Target Start/End: Complemental strand, 15728931 - 15728830
Alignment:
Q  117 gatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttattt 216  Q
    |||||||||||||  |||||||||| ||| |||||||  |  | ||| ||||||||| |||||| |||||  |||||||||| || | || |||||||||    
T  15728931 gatttaaattaaagaaattaatagggtctatggtggactatctataatgttggtccaccatagatatttgaggttaaacttaacaccgaaagatttattt 15728832  T
Q  217 ga 218  Q
    ||    
T  15728831 ga 15728830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 32505876 - 32505788
Alignment:
Q  110 atcaaacgatttaaa-ttaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaactta 198  Q
    |||||||| |||||| |||||| | |||||| | ||| ||||||| |||| |||| |||| ||||| |||||||||||| ||||||||||    
T  32505876 atcaaacggtttaaacttaaaaaatttaataaggtctatggtggaccactcttaatgttg-tccattatagacatttggggttaaactta 32505788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 110 - 305
Target Start/End: Original strand, 43481 - 43678
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat---ttggtgttaaacttaccagccaa 206  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||| |||||||||   |||| |||||||||| | | | |    
T  43481 atcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtc-a 43579  T
Q  207 ggatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaa 305  Q
    ||| ||||||| || ||||||  | |  | | ||||| ||||||  ||||||||| ||||||||||||||| |||||| |||||||||| | |||||||    
T  43580 ggacttatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaacttaaaattatttgagggaccaa 43678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 54091 - 54164
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||||  ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  54091 atcaaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacat 54164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 110 - 304
Target Start/End: Complemental strand, 124175 - 123983
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    ||||||||||||||||||| | | |||||| ||||| ||||||| |||| |||||||||||||| |||||| |||||| |||||||||| | |  |||||    
T  124175 atcaaacgatttaaattaaca-atttaatacgatctatggtggaccactcttaaggttggtccaccatagatatttggggttaaacttaaccg-taagga 124078  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggacca 304  Q
    |||||||| || || |||  | |  | | |||| ||||  |  ||||||||| || |||||||||||||||||||  ||||||||| ||||||||    
T  124077 tttatttggcaaacagaggaaaaagtgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaaacttgaaattatttgaaggacca 123983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 125138 - 125212
Alignment:
Q  110 atcaaacgatttaaattaaaataatt-aataggatctgtggtggatcacttttaaggttggtccatcatagacat 183  Q
    |||||| | |||||||||||| |||| |||| | ||| ||||||| |||||||||||||||||||||||| ||||    
T  125138 atcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttggtccatcatatacat 125212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 18891 - 18829
Alignment:
Q  239 ggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaagga 301  Q
    |||||||||||| ||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  18891 ggactaaaacataagttttattaaatatgggaccaaaatgaaaacttaaaattatttaaagga 18829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 178
Target Start/End: Complemental strand, 108722 - 108654
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcata 178  Q
    |||||| | ||||||||| |||||||||||| |||| ||||||| ||||||||||||||||||| ||||    
T  108722 atcaaaaggtttaaattataataattaatagcatctatggtggaccacttttaaggttggtccaccata 108654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 306
Target Start/End: Original strand, 63076 - 63235
Alignment:
Q  147 tggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaaggatttatttgacagacggagacacagttaaaggactaaa 246  Q
    ||||||| || | ||||| ||| |||||||||||||||||  |||||||||| ||| || ||||||||||| || ||||||| | |  | | ||||||||    
T  63076 tggtggaccattcttaagattgatccatcatagacatttgaagttaaacttaacagtcagggatttatttggcaaacggagaaaaatgtgagggactaaa 63175  T
Q  247 acatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaa 306  Q
    ||   |  ||||||| || ||||||||||||||||||   |||||||||  |||||||||    
T  63176 acgccatctttattaattgtgggaccaaaatgaaaacacgaaattatttggaggaccaaa 63235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 8099 - 8182
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaa 194  Q
    |||||||| |||||||||||||||||||||  |||| || |||| | || ||||||||| |||| ||||||||||||| ||||||    
T  8099 atcaaacggtttaaattaaaataattaatataatctatgatgga-ccctcttaaggttgatccaccatagacatttggggttaaa 8182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 292
Target Start/End: Complemental strand, 21335 - 21153
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||||| || ||||| ||| |||||||    ||| ||||||| |||| | |||||||||||| ||||||||||||  |||||||||| || | || ||    
T  21335 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccatagacatttgtggttaaacttaacaacgaatga 21236  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||||||| || ||||||  | |  ||| |||  ||||  |   |||||||| ||||||||| |||||||||| |||||||||    
T  21235 tttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaaatgaaaatta 21153  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 307
Target Start/End: Complemental strand, 32780 - 32583
Alignment:
Q  110 atcaaacgatttaaattaaaataat--taataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaag 207  Q
    |||||||| |||||||||||| ||   ||||||||||| || |||| ||||  ||||||||||||| |||||||||||   |||||| ||| |||   ||    
T  32780 atcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaaggttggtccaccatagacatttaaggttaaagttaacag-ttag 32682  T
Q  208 gatttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaat 307  Q
    |||||||||| | || ||||||| |  |   | || |||||| ||||||||||| ||||| ||||||||| ||||||  |||||| |||  |||||||||    
T  32681 gatttatttggccgatggagacaaacat-gggcaccaaaacacgagttttattagttatgtgaccaaaataaaaacttgaaattaattacgggaccaaat 32583  T

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Target: scaffold0128 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 292
Target Start/End: Complemental strand, 22188 - 22014
Alignment:
Q  110 atcaaacgatttaaattaaaataattaataggatctgtggtggatcacttttaaggttggtccatcatagacatttggtgttaaacttaccagccaagga 209  Q
    |||||| | |||||||||||  |||||||||| ||| ||||||| ||| |  || ||||||||| ||||| ||||| | |||||||||        | ||    
T  22188 atcaaatggtttaaattaaagaaattaatagggtctatggtggaccacctacaatgttggtccaccataggcattttgggttaaactt--------aaga 22097  T
Q  210 tttatttgacagacggagacacagttaaaggactaaaacatgagttttattacttatgggaccaaaatgaaaactgaaaatta 292  Q
    |||||||||| || |||| || |  ||| |||| ||||||||||||||||||  |||| || ||| || ||||||| ||||||    
T  22096 tttatttgactgaaggaggcaaacctaagggaccaaaacatgagttttattaactatgtgatcaatataaaaactgtaaatta 22014  T

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Target: scaffold0114 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 38608 - 38532
Alignment:
Q  250 tgagttttattacttatgggaccaaaatgaaaactgaaaattatttaaaggaccaaatgccctcttaagcctatatt 326  Q
    |||||||||  | |||||||||||||||| ||||| | |||||||||  |||||||||| ||  ||||||| |||||    
T  38608 tgagttttacaatttatgggaccaaaatggaaactcataattatttaggggaccaaatgtccaattaagccaatatt 38532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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