View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4250_low_12 (Length: 245)

Name: NF4250_low_12
Description: NF4250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4250_low_12
NF4250_low_12
[»] chr4 (42 HSPs)
chr4 (100-220)||(24784971-24785091)
chr4 (100-220)||(24823175-24823295)
chr4 (120-220)||(8063075-8063175)
chr4 (120-220)||(52122195-52122295)
chr4 (123-220)||(38491759-38491856)
chr4 (120-245)||(43509415-43509540)
chr4 (120-245)||(5324995-5325120)
chr4 (120-204)||(1177495-1177579)
chr4 (120-220)||(19739149-19739249)
chr4 (132-220)||(31945757-31945845)
chr4 (132-220)||(39958302-39958390)
chr4 (120-220)||(40694570-40694670)
chr4 (120-220)||(42629973-42630073)
chr4 (120-220)||(42472144-42472244)
chr4 (120-245)||(51859270-51859395)
chr4 (120-220)||(3402552-3402652)
chr4 (145-245)||(53324690-53324790)
chr4 (145-220)||(258627-258702)
chr4 (121-245)||(31227506-31227629)
chr4 (146-220)||(44521568-44521642)
chr4 (128-204)||(6070907-6070983)
chr4 (115-220)||(52573663-52573760)
chr4 (120-220)||(3108810-3108902)
chr4 (124-220)||(36944196-36944284)
chr4 (145-204)||(46431483-46431542)
chr4 (145-202)||(10258568-10258625)
chr4 (120-220)||(2586835-2586935)
chr4 (120-245)||(14796024-14796141)
chr4 (177-245)||(52721945-52722013)
chr4 (120-220)||(17892766-17892858)
chr4 (127-220)||(24793239-24793325)
chr4 (169-220)||(49470788-49470839)
chr4 (151-245)||(51675262-51675355)
chr4 (134-203)||(27982451-27982520)
chr4 (176-245)||(30683233-30683302)
chr4 (123-204)||(36511451-36511532)
chr4 (3-50)||(24785141-24785186)
chr4 (3-50)||(24823080-24823125)
chr4 (169-245)||(41146620-41146696)
chr4 (169-220)||(14614994-14615045)
chr4 (145-204)||(28377555-28377614)
chr4 (145-202)||(7952681-7952738)
[»] chr5 (41 HSPs)
chr5 (120-220)||(39689706-39689806)
chr5 (120-245)||(30776813-30776938)
chr5 (120-220)||(32707157-32707257)
chr5 (120-245)||(30919160-30919285)
chr5 (120-220)||(1638771-1638871)
chr5 (120-220)||(10657486-10657586)
chr5 (122-220)||(34032865-34032963)
chr5 (124-208)||(7629557-7629641)
chr5 (120-220)||(25750105-25750205)
chr5 (124-220)||(27938658-27938754)
chr5 (120-220)||(41392225-41392325)
chr5 (120-245)||(9793309-9793434)
chr5 (124-220)||(17137706-17137802)
chr5 (123-213)||(21251991-21252081)
chr5 (120-245)||(11907782-11907906)
chr5 (127-220)||(26793977-26794070)
chr5 (120-220)||(1795893-1795993)
chr5 (120-220)||(7977689-7977789)
chr5 (145-214)||(12190925-12190994)
chr5 (152-220)||(35745945-35746013)
chr5 (120-220)||(33830631-33830723)
chr5 (145-220)||(1921280-1921357)
chr5 (120-214)||(26716780-26716874)
chr5 (120-214)||(26986520-26986614)
chr5 (145-220)||(43357304-43357379)
chr5 (115-220)||(22738351-22738457)
chr5 (145-245)||(5722494-5722594)
chr5 (145-245)||(5985480-5985580)
chr5 (169-220)||(27085871-27085922)
chr5 (123-197)||(14836845-14836919)
chr5 (120-166)||(18001483-18001529)
chr5 (145-204)||(30284121-30284180)
chr5 (169-220)||(32625317-32625368)
chr5 (169-204)||(39796511-39796546)
chr5 (168-203)||(41233833-41233868)
chr5 (169-206)||(19101753-19101790)
chr5 (115-204)||(42365615-42365704)
chr5 (160-214)||(41472144-41472198)
chr5 (162-220)||(42455132-42455190)
chr5 (169-201)||(9727952-9727984)
chr5 (176-204)||(15066671-15066699)
[»] chr1 (40 HSPs)
chr1 (120-220)||(28948184-28948284)
chr1 (120-220)||(6915842-6915942)
chr1 (120-220)||(10822893-10822993)
chr1 (120-220)||(36363043-36363143)
chr1 (120-220)||(38331477-38331577)
chr1 (120-220)||(52894681-52894781)
chr1 (120-245)||(37346334-37346459)
chr1 (120-220)||(30324745-30324845)
chr1 (120-220)||(37104678-37104778)
chr1 (120-219)||(3427886-3427985)
chr1 (123-220)||(8133207-8133304)
chr1 (120-220)||(25257641-25257741)
chr1 (145-220)||(31652818-31652893)
chr1 (132-220)||(20409101-20409189)
chr1 (145-220)||(38218863-38218938)
chr1 (124-245)||(29862275-29862396)
chr1 (120-213)||(32380577-32380670)
chr1 (120-204)||(34431936-34432020)
chr1 (145-220)||(13012391-13012466)
chr1 (124-245)||(33040853-33040974)
chr1 (145-213)||(4027369-4027437)
chr1 (157-245)||(5985190-5985278)
chr1 (120-220)||(29168447-29168547)
chr1 (118-245)||(9782119-9782246)
chr1 (145-245)||(28658404-28658504)
chr1 (169-220)||(36551904-36551955)
chr1 (124-213)||(2472243-2472331)
chr1 (133-205)||(2364891-2364963)
chr1 (151-203)||(3703835-3703887)
chr1 (145-204)||(10764151-10764210)
chr1 (120-165)||(1037062-1037107)
chr1 (120-165)||(1043968-1044013)
chr1 (124-213)||(34096079-34096163)
chr1 (177-220)||(14167570-14167613)
chr1 (162-220)||(37922714-37922772)
chr1 (118-245)||(43190263-43190382)
chr1 (168-220)||(24852023-24852075)
chr1 (169-220)||(14334797-14334848)
chr1 (169-220)||(38949184-38949235)
chr1 (143-196)||(24589355-24589408)
[»] chr3 (50 HSPs)
chr3 (118-245)||(40499399-40499526)
chr3 (120-220)||(52684943-52685043)
chr3 (120-245)||(1529036-1529161)
chr3 (120-245)||(37996279-37996404)
chr3 (120-220)||(7328254-7328354)
chr3 (124-245)||(1678665-1678786)
chr3 (127-220)||(22289221-22289314)
chr3 (120-220)||(28882058-28882158)
chr3 (120-220)||(42230396-42230496)
chr3 (120-219)||(22610255-22610354)
chr3 (120-204)||(25936056-25936140)
chr3 (124-220)||(39664917-39665013)
chr3 (120-220)||(21005765-21005865)
chr3 (124-204)||(28705793-28705873)
chr3 (120-220)||(35390385-35390485)
chr3 (120-245)||(212991-213116)
chr3 (127-220)||(10224135-10224228)
chr3 (120-201)||(19421953-19422034)
chr3 (124-220)||(19877741-19877837)
chr3 (145-220)||(33241374-33241449)
chr3 (145-214)||(52501262-52501331)
chr3 (120-220)||(13748017-13748117)
chr3 (133-220)||(22311370-22311457)
chr3 (169-220)||(28969031-28969082)
chr3 (145-204)||(29916307-29916366)
chr3 (145-204)||(29965460-29965519)
chr3 (145-204)||(45532064-45532123)
chr3 (145-220)||(48333441-48333516)
chr3 (145-199)||(13352746-13352800)
chr3 (126-245)||(52121778-52121889)
chr3 (145-245)||(45348049-45348149)
chr3 (145-245)||(53192911-53193011)
chr3 (169-220)||(48123867-48123918)
chr3 (145-220)||(48334386-48334461)
chr3 (145-245)||(19349142-19349242)
chr3 (132-204)||(41741676-41741748)
chr3 (169-245)||(42464165-42464241)
chr3 (169-204)||(7899266-7899301)
chr3 (152-207)||(45056828-45056883)
chr3 (134-199)||(7754626-7754691)
chr3 (123-220)||(30786241-30786338)
chr3 (127-204)||(2123228-2123297)
chr3 (115-220)||(38888596-38888693)
chr3 (157-245)||(50286762-50286849)
chr3 (169-220)||(2566727-2566778)
chr3 (169-200)||(25701303-25701334)
chr3 (169-220)||(47642531-47642582)
chr3 (134-220)||(8352027-8352112)
chr3 (168-245)||(47750476-47750553)
chr3 (160-204)||(13803388-13803432)
[»] chr7 (44 HSPs)
chr7 (120-245)||(9249714-9249839)
chr7 (120-245)||(9283264-9283389)
chr7 (120-245)||(25970094-25970219)
chr7 (120-220)||(1042558-1042658)
chr7 (120-220)||(40096697-40096797)
chr7 (120-213)||(12103478-12103571)
chr7 (120-245)||(27554835-27554960)
chr7 (120-245)||(42897405-42897530)
chr7 (120-220)||(19511194-19511294)
chr7 (120-205)||(34122123-34122208)
chr7 (120-245)||(39521579-39521703)
chr7 (132-220)||(554422-554510)
chr7 (120-204)||(48154565-48154649)
chr7 (120-209)||(26973568-26973657)
chr7 (120-220)||(4292196-4292296)
chr7 (120-220)||(26773070-26773170)
chr7 (145-220)||(26843574-26843649)
chr7 (120-220)||(36413867-36413967)
chr7 (145-220)||(27397120-27397195)
chr7 (145-203)||(16563758-16563816)
chr7 (145-203)||(16601846-16601904)
chr7 (136-214)||(38065220-38065298)
chr7 (124-213)||(47237728-47237817)
chr7 (120-220)||(21180337-21180437)
chr7 (120-204)||(47718670-47718754)
chr7 (120-220)||(34238604-34238696)
chr7 (115-245)||(16851315-16851437)
chr7 (120-245)||(48163932-48164048)
chr7 (120-220)||(21409885-21409977)
chr7 (120-220)||(36661500-36661592)
chr7 (169-220)||(36757560-36757611)
chr7 (169-220)||(36767084-36767135)
chr7 (151-209)||(35160392-35160450)
chr7 (170-220)||(36763339-36763389)
chr7 (120-245)||(11830704-11830821)
chr7 (120-220)||(23078605-23078705)
chr7 (120-245)||(27354445-27354562)
chr7 (145-220)||(8029336-8029411)
chr7 (167-220)||(11058933-11058986)
chr7 (169-220)||(15877970-15878021)
chr7 (169-220)||(33454625-33454676)
chr7 (151-245)||(44958864-44958958)
chr7 (124-203)||(24956759-24956837)
chr7 (145-204)||(35136542-35136601)
[»] chr6 (20 HSPs)
chr6 (120-245)||(31186932-31187057)
chr6 (120-220)||(1035794-1035894)
chr6 (120-245)||(234790-234915)
chr6 (124-245)||(19128629-19128750)
chr6 (127-220)||(32018695-32018788)
chr6 (145-245)||(3213159-3213259)
chr6 (145-203)||(13607299-13607357)
chr6 (139-220)||(7255439-7255520)
chr6 (120-220)||(7187765-7187857)
chr6 (120-245)||(31738146-31738271)
chr6 (169-245)||(8357896-8357972)
chr6 (127-220)||(4153066-4153159)
chr6 (145-245)||(32130062-32130162)
chr6 (120-204)||(6707510-6707586)
chr6 (169-220)||(10893749-10893800)
chr6 (169-220)||(26327843-26327894)
chr6 (151-220)||(3299950-3300019)
chr6 (151-220)||(13060902-13060971)
chr6 (151-213)||(13044909-13044971)
chr6 (120-220)||(11105807-11105904)
[»] scaffold0177 (1 HSPs)
scaffold0177 (120-220)||(24875-24975)
[»] chr8 (33 HSPs)
chr8 (120-220)||(34900349-34900449)
chr8 (120-245)||(16385051-16385176)
chr8 (120-220)||(22200798-22200898)
chr8 (139-220)||(2871500-2871581)
chr8 (120-245)||(4246940-4247065)
chr8 (120-245)||(28875543-28875668)
chr8 (127-220)||(36484464-36484557)
chr8 (120-220)||(32878096-32878196)
chr8 (126-220)||(6029100-6029194)
chr8 (120-220)||(13422659-13422759)
chr8 (120-245)||(12579515-12579632)
chr8 (145-245)||(19436867-19436967)
chr8 (145-245)||(19573016-19573116)
chr8 (120-220)||(5540461-5540553)
chr8 (145-220)||(25022792-25022867)
chr8 (120-220)||(32425403-32425503)
chr8 (120-220)||(37372746-37372846)
chr8 (145-245)||(37669583-37669683)
chr8 (120-220)||(5817859-5817951)
chr8 (145-220)||(43770706-43770781)
chr8 (120-195)||(45216200-45216275)
chr8 (115-245)||(32638187-32638317)
chr8 (145-214)||(19947380-19947449)
chr8 (120-220)||(32760395-32760487)
chr8 (120-199)||(3892479-3892558)
chr8 (170-220)||(41098489-41098539)
chr8 (160-204)||(38389206-38389250)
chr8 (124-203)||(7412953-7413032)
chr8 (145-220)||(30804254-30804329)
chr8 (134-220)||(33106-33192)
chr8 (170-220)||(28738017-28738067)
chr8 (176-213)||(24100055-24100092)
chr8 (169-214)||(12358419-12358464)
[»] scaffold0250 (1 HSPs)
scaffold0250 (120-220)||(6168-6268)
[»] chr2 (36 HSPs)
chr2 (120-220)||(12206666-12206766)
chr2 (120-245)||(7877138-7877263)
chr2 (126-220)||(5371601-5371695)
chr2 (132-245)||(6496662-6496775)
chr2 (120-220)||(28746177-28746277)
chr2 (124-220)||(40431538-40431634)
chr2 (120-220)||(4562289-4562389)
chr2 (120-220)||(10574001-10574101)
chr2 (145-220)||(4169523-4169598)
chr2 (134-245)||(12819820-12819930)
chr2 (115-220)||(8482426-8482531)
chr2 (120-220)||(14216753-14216853)
chr2 (120-220)||(7806845-7806937)
chr2 (120-220)||(34146702-34146795)
chr2 (151-220)||(44157096-44157165)
chr2 (145-220)||(1006011-1006087)
chr2 (132-220)||(3545091-3545179)
chr2 (145-205)||(3564358-3564418)
chr2 (145-245)||(16562233-16562333)
chr2 (145-245)||(22571423-22571523)
chr2 (120-220)||(35997030-35997130)
chr2 (120-219)||(6125212-6125303)
chr2 (154-220)||(35342838-35342904)
chr2 (118-220)||(22485309-22485403)
chr2 (145-204)||(18301602-18301661)
chr2 (135-204)||(37354492-37354561)
chr2 (151-203)||(24586052-24586104)
chr2 (124-204)||(40536732-40536812)
chr2 (124-203)||(5588559-5588638)
chr2 (169-220)||(14824638-14824689)
chr2 (169-220)||(40307864-40307915)
chr2 (145-204)||(2319811-2319870)
chr2 (169-220)||(31235734-31235785)
chr2 (134-204)||(33737437-33737507)
chr2 (122-220)||(4356368-4356458)
chr2 (145-202)||(20537385-20537442)
[»] scaffold0640 (1 HSPs)
scaffold0640 (120-220)||(7422-7514)
[»] scaffold0060 (1 HSPs)
scaffold0060 (120-245)||(29630-29747)
[»] scaffold0005 (2 HSPs)
scaffold0005 (120-245)||(43590-43707)
scaffold0005 (169-220)||(202331-202382)
[»] scaffold0836 (1 HSPs)
scaffold0836 (134-204)||(4978-5048)
[»] scaffold0285 (1 HSPs)
scaffold0285 (170-220)||(13919-13969)


Alignment Details
Target: chr4 (Bit Score: 97; Significance: 9e-48; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 100 - 220
Target Start/End: Complemental strand, 24785091 - 24784971
Alignment:
Q  100 tatatttgctatttactctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacg 199  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24785091 tatatttgctatttactgtaaagcccggatacgagatacgatacagatacaatactgcaccgatacgttgatacggaaaattttcaaaaatcaagatacg 24784992  T
Q  200 atacgactgagatacattaat 220  Q
    ||||| ||||||||| |||||    
T  24784991 atacggctgagatacgttaat 24784971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 100 - 220
Target Start/End: Original strand, 24823175 - 24823295
Alignment:
Q  100 tatatttgctatttactctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacg 199  Q
    ||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24823175 tatatttgctatttactgtaaagcccggatacgagatacgatacagatacaatactgcaccgatacgttgatacggaaaattttcaaaaatcaagatacg 24823274  T
Q  200 atacgactgagatacattaat 220  Q
    ||||| ||||||||| |||||    
T  24823275 atacggctgagatacgttaat 24823295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 8063075 - 8063175
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  8063075 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 8063174  T
Q  220 t 220  Q
    |    
T  8063175 t 8063175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 52122195 - 52122295
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  52122195 aagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 52122294  T
Q  220 t 220  Q
    |    
T  52122295 t 52122295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 38491759 - 38491856
Alignment:
Q  123 cccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  38491759 cccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgtgatacgttaat 38491856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 43509415 - 43509540
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  43509415 aagcctggatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 43509514  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  43509515 taaaaaaaattatataattaaatgta 43509540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 5324995 - 5325120
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||||||||||||||| ||| ||||| ||||    
T  5324995 aagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatacgaaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 5325094  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  5325095 taaaaaaaattatataattaaatgta 5325120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 1177579 - 1177495
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  1177579 aagcccggatacgagatacgatacggatacgatactgcactgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacg 1177495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 19739249 - 19739149
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  19739249 aagcccggatacgagatacgatacggatacgacactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 19739150  T
Q  220 t 220  Q
    |    
T  19739149 t 19739149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 31945757 - 31945845
Alignment:
Q  132 gagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||||| |||||    
T  31945757 gagatacgatacggatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaattaagatacgatacgactgggatacgttaat 31945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 220
Target Start/End: Complemental strand, 39958390 - 39958302
Alignment:
Q  132 gagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||    
T  39958390 gagatacgatacggatacgatactgcaccgatacgctgatacgaaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 39958302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 40694670 - 40694570
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||||| ||| ||||| ||||    
T  40694670 aagcccagatacgagatacgatacggatacaatactgcacgaatacgttgatacgggaaaatttcaaaaattaagatacgatacggctgggatacgttaa 40694571  T
Q  220 t 220  Q
    |    
T  40694570 t 40694570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 42629973 - 42630073
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  ||||||||||  ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  42629973 aagcccggatacaagatacgatatagatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaattaagatacgatacggctgagatacgttaa 42630072  T
Q  220 t 220  Q
    |    
T  42630073 t 42630073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 42472144 - 42472244
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| |||||||||||||||||| | ||||||||||||||   ||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  42472144 aagctcggatacgagatacgatacggatacgacactgcaccgatacgccaatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 42472243  T
Q  220 t 220  Q
    |    
T  42472244 t 42472244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 51859395 - 51859270
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| |||||  ||||||||||| ||||| ||||||||||||||||  || |||| |||||||||||||||||||||||||||| ||| ||||||||||    
T  51859395 aagcctggatacaagatacgatacagatacgatactgcaccgatacgccgacacgggaaaatttcaaaaatcaagatacgatacggctgggatacattaa 51859296  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  51859295 taaaaaaaattatataattaaatgta 51859270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 3402552 - 3402652
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| |||||||||||||||||| ||| || |||||||||| |||| |||||||||| |||||||||||||||||| | ||||||||| ||||    
T  3402552 aagctcggatacgagatacgatacggatacgatattgtaccgatacgtcgatatggaaaaattttaaaaatcaagatacgatatggctgagatacgttaa 3402651  T
Q  220 t 220  Q
    |    
T  3402652 t 3402652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 53324790 - 53324690
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| |||||        ||||||||||||||||    
T  53324790 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgtgatacgttaataaaaaaaattatataattaaatgt 53324691  T
Q  245 a 245  Q
    |    
T  53324690 a 53324690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 258627 - 258702
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||| |||||    
T  258627 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgaaatacgttaat 258702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 245
Target Start/End: Complemental strand, 31227629 - 31227506
Alignment:
Q  121 agcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||| ||||||||||||  |||| |||||||||||||||   |||||| ||||||||||||||| ||||||||||||||||| ||||| |||||    
T  31227629 agcccggatacgagatacgatacatatacgatactgcaccgatactccgatacg-aaaaatttcaaaaattaagatacgatacgactgtgatacgttaat 31227531  T
Q  221 nnnnnnnnttatataattaaatgta 245  Q
            |||||||||||||||||    
T  31227530 aaaaaaaattatataattaaatgta 31227506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 146 - 220
Target Start/End: Original strand, 44521568 - 44521642
Alignment:
Q  146 atacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  44521568 atacgatactgcaccgatacgtctatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 44521642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 6070907 - 6070983
Alignment:
Q  128 atatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||||||||||||||| |||||  ||||||| |||||||||||||| ||||||||| |||||| |||||||||||||    
T  6070907 atatgagatacgatacagatacgttactgcatcgatacgttgatacagaaaaatttaaaaaataaagatacgatacg 6070983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 52573760 - 52573663
Alignment:
Q  115 ctctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||| |||| |||||| |||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||| ||| |||||    
T  52573760 ctctgaagctcggatacgagatacgatacggatacgatactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgatacggctgggatac 52573669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 3108810 - 3108902
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| ||| |||||||||||||||||| |||||||||| ||||         |||||||||||||||||||||||||||||||||||||||| ||||    
T  3108810 aagcccgaatacgagatacgatacggatacgatactgcaccaatact--------gaaaaatttcaaaaatcaagatacgatacgactgagatacgttaa 3108901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 36944284 - 36944196
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||| ||||||||||||||| |||||||||        ||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  36944284 ccggatatgaaatacgatacggatacgatactgcac--------tgatacgaaaaaatttcaaaaattaagatacgatacgactgagatacgttaat 36944196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 46431483 - 46431542
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| |||||||||||||| || |||||| |||||||||||||||||||||||||||||    
T  46431483 gatacgatactgcaccgatatgtcgatacgaaaaaatttcaaaaatcaagatacgatacg 46431542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 10258625 - 10258568
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgata 202  Q
    ||||| |||||||||||||||||  ||||| |||||||||||||||||||||||||||    
T  10258625 gatacgatactgcaccgatacgtcaatacgaaaaaatttcaaaaatcaagatacgata 10258568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 2586935 - 2586835
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| ||| ||| || ||||||||||| ||||||||||||||  | |||||| ||   ||| ||||||||| |||||||||||||||||||| ||||    
T  2586935 aagcccgaatacgagttatgatacggatacgatactgcaccgatatatcgatacgaaattttttaaaaaatcaaaatacgatacgactgagatacgttaa 2586836  T
Q  220 t 220  Q
    |    
T  2586835 t 2586835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 14796141 - 14796024
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| |||||||||||||||||| |||||||||||        |||| ||||| |||||||||||||||||||||||| ||| ||||| ||||    
T  14796141 aagcccagatacgagatacgatacggatacgatactgcaccg--------atacagaaaattttcaaaaatcaagatacgatacggctgggatacgttaa 14796050  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  14796049 taaaaaaaattatataattaaatgta 14796024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 177 - 245
Target Start/End: Complemental strand, 52722013 - 52721945
Alignment:
Q  177 aaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||    
T  52722013 aaaatttcaaaaatcaagatacgatacggctgagatacattaataaaaaaaattatataattaaatgta 52721945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 17892858 - 17892766
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||| ||||||||||||         ||||||||||||||||||||||||||||| || |||||| ||||    
T  17892858 aagcctggatacgagatacgatacggatacgatattgcaccgatacga--------aaaaatttcaaaaatcaagatacgatacggcttagatacgttaa 17892767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 24793239 - 24793325
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||| ||||| ||||||||||||||||         ||||||||||||||||||||||||||||| ||||||||| |||||    
T  24793239 gatacgagatacgatacagatacgatactgcaccgatacgaa-------aaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 24793325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 49470839 - 49470788
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||| |||||    
T  49470839 gatacggaaaaatttcaaaaattaagatacgatacggctgagatacgttaat 49470788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 245
Target Start/End: Complemental strand, 51675355 - 51675262
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||||||||||| | ||||||| |||||| ||||||||||||| |||||||||  |||||||||||||||        |||||||||||||||||    
T  51675355 atactgcaccgacatgttgatagggaaaa-tttcaaaaatcaaaatacgatacagctgagatacattaataaaaaaaattatataattaaatgta 51675262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 27982520 - 27982451
Alignment:
Q  134 gatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    |||||||||| ||||| ||||  |||||||||  |||||||||||||||| |||| ||||||||||||||    
T  27982520 gatacgatacagatacgatacgacaccgatacagtgatacggaaaaattttaaaattcaagatacgatac 27982451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Original strand, 30683233 - 30683302
Alignment:
Q  176 aaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||||||||||||||||| |||||||||||||||||||| |||||        |||||||||||||||||    
T  30683233 aaaaatttcaaaaatcaaaatacgatacgactgagatacgttaataaaaaaaattatataattaaatgta 30683302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 36511451 - 36511532
Alignment:
Q  123 cccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||| ||| ||||| |||||||||||| ||||||||| ||||||  |||| || ||||||| |||| |||||||||||||||    
T  36511451 cccgaatacgagatgcgatacggatacgatactgcactgatacgccgatatgggaaaattttaaaagtcaagatacgatacg 36511532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 24785186 - 24785141
Alignment:
Q  3 agaaatgaagaaggtggctaaataactactatagcatgcccattttgt 50  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||    
T  24785186 agaaatgaagaaggtggctaaataactac--tagcatgcccattttgt 24785141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 24823080 - 24823125
Alignment:
Q  3 agaaatgaagaaggtggctaaataactactatagcatgcccattttgt 50  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||    
T  24823080 agaaatgaagaaggtggctaaataactac--tagcatgcccattttgt 24823125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 41146696 - 41146620
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||||||||||||||||||||||||||||| ||||| ||| ||||| |||||        |||||||||||||||||    
T  41146696 gatacggaaaaatttcaaaaatcaagatacaatacggctgggatacgttaataaaaaattttatataattaaatgta 41146620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 14615045 - 14614994
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  14615045 gatatggaaaaatttcaaaaatcatgatacgatacggctgagatacgttaat 14614994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 28377614 - 28377555
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| ||||||||| ||||||  ||||||  ||||||||||||||||||||||||||||    
T  28377614 gatacgatactgcactgatacgccgatacgagaaaatttcaaaaatcaagatacgatacg 28377555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 7952681 - 7952738
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgata 202  Q
    ||||| |||| |||| ||||||  |||| |||||||||||||||||||||||||||||    
T  7952681 gatacgatacggcactgatacgccgatatggaaaaatttcaaaaatcaagatacgata 7952738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 39689706 - 39689806
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  39689706 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 39689805  T
Q  220 t 220  Q
    |    
T  39689806 t 39689806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 30776813 - 30776938
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  30776813 aagcccggatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 30776912  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  30776913 taaaaaaaattatataattaaatgta 30776938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 32707157 - 32707257
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  32707157 aagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 32707256  T
Q  220 t 220  Q
    |    
T  32707257 t 32707257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 30919285 - 30919160
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||  || ||||| ||||    
T  30919285 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaaattcaaaaatcaagatacgatacggatgtgatacgttaa 30919186  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  30919185 taaaaaaaattatataattaaatgta 30919160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 1638771 - 1638871
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  1638771 aagctcggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgtgatacgttaa 1638870  T
Q  220 t 220  Q
    |    
T  1638871 t 1638871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 10657586 - 10657486
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  10657586 aagcctggatacgagatacgatacggatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 10657487  T
Q  220 t 220  Q
    |    
T  10657486 t 10657486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 34032963 - 34032865
Alignment:
Q  122 gcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||| |||||||||||| |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  34032963 gcccggatttgagatacgatatggatacgatactgcatcgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 34032865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 7629641 - 7629557
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactg 208  Q
    ||||||| ||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||    
T  7629641 ccggatacgagatacgatacggatataatactgcaccgatacattgacacgggaaaatttcaaaaatcaagatacgatacgactg 7629557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 25750205 - 25750105
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||| ||||| | |||||||||||||||||||||||||||| ||| ||||| ||||    
T  25750205 aagcccggatacgagatacgatacggatacgatactgcatcgatacgtcgatacaggaaaatttcaaaaatcaagatacgatacggctgtgatacgttaa 25750106  T
Q  220 t 220  Q
    |    
T  25750105 t 25750105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 27938754 - 27938658
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| ||||||| |||||||||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||| |||||    
T  27938754 ccggatacgagatacaatacggatacgatactgcaccgatacgtcgatacgggaaaattttaaaaatcaagatacgatacggctgagatacgttaat 27938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 41392225 - 41392325
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| |||||||||||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  41392225 aagcccagatacgagatacgatacggatacgatactgcactgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 41392324  T
Q  220 t 220  Q
    |    
T  41392325 t 41392325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 9793434 - 9793309
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||| || ||||||| |||||||||||||||||||||| ||||| ||| ||||| ||||    
T  9793434 aagcccggatacgagatgcgatacggatacgatactgcaccgatatgtcgatacggcaaaatttcaaaaatcaagatacaatacggctgtgatacgttaa 9793335  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  9793334 taaaaaaaattatataattaaatgta 9793309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 17137706 - 17137802
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| |||||||||||  ||||  ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||| |||||    
T  17137706 ccggatacgagatacgatatagatatgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacaatacgagtgagatacgttaat 17137802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 213
Target Start/End: Complemental strand, 21252081 - 21251991
Alignment:
Q  123 cccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    |||||||| ||||||| ||||| |||| |||||||||||||| ||  |||| |||||||||||||||||||||||||||| ||||||||||    
T  21252081 cccggatacgagatacaatacgtatacgatactgcaccgatatgtcaatacagaaaaatttcaaaaatcaagatacgatatgactgagata 21251991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 11907906 - 11907782
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| ||||||| |||||||||| |||||| ||||||||  ||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||| ||||    
T  11907906 aagctcggatataagatacgatatggatacgatactgcattgatacgtcgatacggaaaaatttcaaaaat-aagatacaatacggctgagatacgttaa 11907808  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  11907807 taaaaaaaattatataattaaatgta 11907782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 26793977 - 26794070
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||||||||| ||||| || ||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||| |||||    
T  26793977 gataagagatacgatacggatacgatactacatcgatacgtcaatacggaaaaattttaaaaatcaagatacgatacggctgggatacgttaat 26794070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 1795993 - 1795893
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  ||||||||||||||||| ||||||||| ||||||  |||| || |||||||||||||||||||||||||| | ||| ||||| ||||    
T  1795993 aagcccggatacaagatacgatacggatacgatactgcactgatacgccgataagggaaaatttcaaaaatcaagatacgatatggctgggatacgttaa 1795894  T
Q  220 t 220  Q
    |    
T  1795893 t 1795893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 7977789 - 7977689
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| ||| | ||||||||| |||||| ||||||||||||||||  ||||  |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  7977789 aagcccgaatacgtgatacgatatggatacgatactgcaccgatacgccgatagagaaaaatttcaaaaatcaagatacgatacggctgtgatacgttaa 7977690  T
Q  220 t 220  Q
    |    
T  7977689 t 7977689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 214
Target Start/End: Complemental strand, 12190994 - 12190925
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||    
T  12190994 gatacaatacggcatcgatacgttgatacggaaaaattttaaaattcaagatacgatacggctgagatac 12190925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 35745945 - 35746013
Alignment:
Q  152 tactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||| |||||    
T  35745945 tactgcaccgatacgtcgatacgagaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 35746013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 33830723 - 33830631
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||        |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  33830723 aagcccggatacgagatacgatacagatacgatactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 33830632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 1921357 - 1921280
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaa--tttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||| ||||||||| |||||    
T  1921357 gatacgatactacaccgatacgtcgatacggaaaaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 1921280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 26716874 - 26716780
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||||||||||  |||||||||||  ||| |||||||||||||||||| ||||||  |||||||||||||| || |||||||||| ||| |||||    
T  26716874 aagcccggatacaagatacgatacatatataatactgcaccgatacgtcgatacgagaaaatttcaaaaattaatatacgatacggctgggatac 26716780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 214
Target Start/End: Complemental strand, 26986614 - 26986520
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||||||||||  |||||||||||  ||| |||||||||||||||||| ||||||  |||||||||||||| || |||||||||| ||| |||||    
T  26986614 aagcccggatacaagatacgatacatatataatactgcaccgatacgtcgatacgagaaaatttcaaaaattaatatacgatacggctgggatac 26986520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 43357304 - 43357379
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||| ||||||| |||| || |||||| ||||||||||||||||||||| ||||||||| |||||    
T  43357304 gatacgatactgcactgatacgtcgatatgggaaaattacaaaaatcaagatacgatacggctgagatacgttaat 43357379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 22738457 - 22738351
Alignment:
Q  115 ctctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttga-tacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    |||| |||||| |||| ||||||  |||| ||||| |||||||| |||||||  || |||| |||||||||||||||||||||||||| || || |||||    
T  22738457 ctctgaagcccagatacgagatataatacagatacgatactgcaacgatacgccgaatacgaaaaaatttcaaaaatcaagatacgatccggctaagata 22738358  T
Q  214 cattaat 220  Q
    |||||||    
T  22738357 cattaat 22738351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 5722594 - 5722494
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| |||||||||||||| || |||||| ||   |||||||||||||||||||||||| ||||||||| |||||        ||||||||||||||||    
T  5722594 gatacgatactgcaccgatatgtcgatacgaaattttttcaaaaatcaagatacgatacggctgagatacgttaataaaaatttttatataattaaatgt 5722495  T
Q  245 a 245  Q
    |    
T  5722494 a 5722494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 5985480 - 5985580
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||| ||| ||||||  ||||||| ||||||| |||||||||||||||||||| ||||||||| |||||        ||||||||||||||||    
T  5985480 gatacgatactacactgatacgccgatacgggaaaattttaaaaatcaagatacgatacggctgagatacgttaataaaaaaaattatataattaaatgt 5985579  T
Q  245 a 245  Q
    |    
T  5985580 a 5985580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 27085922 - 27085871
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| |||||    
T  27085922 gatatggaaaaatttcaaaaatcaagatacgatacgactgggatacgttaat 27085871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 14836919 - 14836845
Alignment:
Q  123 cccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagata 197  Q
    |||| ||| |||||||||||||||||  ||||||||  ||||||| ||||  |||||||||||||||||||||||    
T  14836919 cccgaatacgagatacgatacggatatgatactgcattgatacgtcgatatagaaaaatttcaaaaatcaagata 14836845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 166
Target Start/End: Original strand, 18001483 - 18001529
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacg 166  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  18001483 aagcccggatacgagatacgatacggatacgatactgcaccgatacg 18001529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 30284121 - 30284180
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| ||||||||||||||||| ||||| ||||||  | ||||||||||||||||||||    
T  30284121 gatacgatactgcaccgatacgtcgatacagaaaaaaattaaaaatcaagatacgatacg 30284180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 32625368 - 32625317
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||||||||||||||  ||| ||||| |||||    
T  32625368 gatacggaaaaatttcaaaaatcaagatacgatacagctgggatacgttaat 32625317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 39796511 - 39796546
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  39796511 gatacggaaaaatttcaaaaatcaagatacgatacg 39796546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 203
Target Start/End: Complemental strand, 41233868 - 41233833
Alignment:
Q  168 tgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    ||||||||||||||||||||||||||||||||||||    
T  41233868 tgatacggaaaaatttcaaaaatcaagatacgatac 41233833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 206
Target Start/End: Original strand, 19101753 - 19101790
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgac 206  Q
    |||||||||||||||||||| |||||||||||||||||    
T  19101753 gatacggaaaaatttcaaaattcaagatacgatacgac 19101790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 204
Target Start/End: Original strand, 42365615 - 42365704
Alignment:
Q  115 ctctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||| ||||| | ||| |||||| ||||||||||   ||||||| ||||| || ||||||| | ||||| ||||||||||||||||||||    
T  42365615 ctctgaagcctgaatacgagatatgatacggatatgttactgcatcgatatgtcgatacgggacaattttaaaaatcaagatacgatacg 42365704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Original strand, 41472144 - 41472198
Alignment:
Q  160 cgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    ||||||| |||||  ||||||||| |||| ||||||||||||||| |||||||||    
T  41472144 cgatacgctgataaagaaaaattttaaaattcaagatacgatacggctgagatac 41472198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 42455190 - 42455132
Alignment:
Q  162 atacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||| ||||||||||||||| |||| | |||||||||| || ||||||||| |||||    
T  42455190 atacgtcgatacggaaaaattttaaaatttaagatacgatgcggctgagatactttaat 42455132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 9727952 - 9727984
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgat 201  Q
    ||||| |||||||||||||||||||||||||||    
T  9727952 gatacagaaaaatttcaaaaatcaagatacgat 9727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 204
Target Start/End: Complemental strand, 15066699 - 15066671
Alignment:
Q  176 aaaaatttcaaaaatcaagatacgatacg 204  Q
    |||||||||||||||||||||||||||||    
T  15066699 aaaaatttcaaaaatcaagatacgatacg 15066671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 28948184 - 28948284
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  28948184 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 28948283  T
Q  220 t 220  Q
    |    
T  28948284 t 28948284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 6915842 - 6915942
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  6915842 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 6915941  T
Q  220 t 220  Q
    |    
T  6915942 t 6915942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 10822993 - 10822893
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  10822993 aagcccgaatacgagatacgatacggatacaatactgtaccgatacgttgatacggagaaatttcaaaaatcaagatacgatacggctgagatacgttaa 10822894  T
Q  220 t 220  Q
    |    
T  10822893 t 10822893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 36363043 - 36363143
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  36363043 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 36363142  T
Q  220 t 220  Q
    |    
T  36363143 t 36363143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 38331577 - 38331477
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  38331577 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggtaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 38331478  T
Q  220 t 220  Q
    |    
T  38331477 t 38331477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 52894681 - 52894781
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  52894681 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 52894780  T
Q  220 t 220  Q
    |    
T  52894781 t 52894781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 37346334 - 37346459
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  37346334 aagcctggatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 37346433  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  37346434 taaaaaaaattatataattaaatgta 37346459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 30324845 - 30324745
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  30324845 aagcccggatacgagatatgatacggatacgatactgcatcgatacgttgatacggaaaaatttcaaaaattaagatacgatacggctgggatacgttaa 30324746  T
Q  220 t 220  Q
    |    
T  30324745 t 30324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 37104778 - 37104678
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||  ||| ||||| ||||    
T  37104778 aagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacagctgggatacgttaa 37104679  T
Q  220 t 220  Q
    |    
T  37104678 t 37104678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 3427985 - 3427886
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  3427985 aagcctggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 3427886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 8133304 - 8133207
Alignment:
Q  123 cccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  8133304 cccggatacgagatacgatacggatacgatactgcactgatacgtcgatacggtaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 8133207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 25257741 - 25257641
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  25257741 aagcccggatacgagatatgatacggatacgatactgcaccgatacgccgatatggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 25257642  T
Q  220 t 220  Q
    |    
T  25257641 t 25257641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 31652818 - 31652893
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  31652818 gatacgatattgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgcctgagatacgttaat 31652893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 20409101 - 20409189
Alignment:
Q  132 gagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||| ||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  20409101 gagatacgatacagatacgatactgcaccgatatgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 20409189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 38218938 - 38218863
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  38218938 gatacgatactgcactgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 38218863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 29862396 - 29862275
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnn 223  Q
    ||||||| |||||||||||| ||||| |||||| || ||||||| || |||||||||||||||||||||||||||||||||  || ||||| |||||       
T  29862396 ccggatacgagatacgatacagatacgatactgtactgatacgtcgaaacggaaaaatttcaaaaatcaagatacgatacggttgtgatacgttaataaa 29862297  T
Q  224 nnnnnttatataattaaatgta 245  Q
         |||||||||||||||||    
T  29862296 aaaaattatataattaaatgta 29862275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 32380577 - 32380670
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    ||||||| ||| ||||||||||||| |||  ||||||||  ||||||| ||||||||||||||||||||||||||||| |||||| ||||||||    
T  32380577 aagcccgaatacgagatacgatacgtatatgatactgcaatgatacgtcgatacggaaaaatttcaaaaatcaagatatgatacggctgagata 32380670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 34431936 - 34432020
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||| |||||| |||||| ||||||||||| ||||||||||||||| |||||| |||||| ||| ||||||||||||||||||||    
T  34431936 aagctcggatacgagatatgatacggatacgatactgcaccgatacattgatatggaaaatttttaaaaatcaagatacgatacg 34432020  T

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Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 13012391 - 13012466
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  13012391 gatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 13012466  T

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Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 33040974 - 33040853
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnn 223  Q
    ||||||| |||||||||| ||||||  |||||| ||||||||||  || |||||||||||||||||| ||||||||||||| ||| ||||| |||||       
T  33040974 ccggatacgagatacgatgcggatatgatactgaaccgatacgtctatgcggaaaaatttcaaaaattaagatacgatacggctgggatacgttaataaa 33040875  T
Q  224 nnnnnttatataattaaatgta 245  Q
         |||||||||||||||||    
T  33040874 aaaatttatataattaaatgta 33040853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 213
Target Start/End: Original strand, 4027369 - 4027437
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| ||||    
T  4027369 gatacgatactgcaccgatacgtcgatacggaaaattttcaaaaatcaagatacgatacggctgtgata 4027437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 5985278 - 5985190
Alignment:
Q  157 caccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||||||||||||||||||||||||||||||||||||||||||||  | ||||||||| |||||        |||||||||||||||||    
T  5985278 caccgatacgttgatacggaaaaatttcaaaaatcaagatacgatcgggctgagatacgttaataaaaaaaattatataattaaatgta 5985190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 29168547 - 29168447
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| ||||||  ||| |||||| ||| ||||||||||||| ||||| | |||||||||||||| ||||||||||||| |||| |||| ||||    
T  29168547 aagcccggatacgagatataatatggatacgatattgcaccgatacgtcgatacaggaaaatttcaaaaattaagatacgatacggctgatatacgttaa 29168448  T
Q  220 t 220  Q
    |    
T  29168447 t 29168447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 9782246 - 9782119
Alignment:
Q  118 taaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacatt 217  Q
    ||||||||| ||| || ||||||||||||||  ||||| ||| ||||||  ||||||| |||||||||||||||||||||||||||| ||  ||||| ||    
T  9782246 taaagcccgaatacgatatacgatacggatatgatactacactgatacgccgatacgggaaaatttcaaaaatcaagatacgatacggctaggatacgtt 9782147  T
Q  218 aatnnnnnnnnttatataattaaatgta 245  Q
    |||        |||||||||||||||||    
T  9782146 aataaaaaaaattatataattaaatgta 9782119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 28658404 - 28658504
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| |||||||||| ||| |  ||||||||||| |||||||||||||||||||||||| ||||||||| |||||        ||||||||||||||||    
T  28658404 gatacgatactgcacctatatgccgatacggaaaattttcaaaaatcaagatacgatacggctgagatacgttaataaaaaaaattatataattaaatgt 28658503  T
Q  245 a 245  Q
    |    
T  28658504 a 28658504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 36551955 - 36551904
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  36551955 gatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 36551904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 2472243 - 2472331
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    ||||||| |||||||||||||||||  |||||||||  ||| || ||||| ||||| ||| |||||||||||||||||||| ||||||||    
T  2472243 ccggatacgagatacgatacggatatgatactgcactaatatgtcgatacagaaaatttt-aaaaatcaagatacgatacggctgagata 2472331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 2364963 - 2364891
Alignment:
Q  133 agatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacga 205  Q
    |||||| |||||||||| ||||||||| |||||||||||||  |||| ||| |||||| ||||||||||||||    
T  2364963 agatacaatacggatacgatactgcactgatacgttgatacataaaagttttaaaaattaagatacgatacga 2364891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Original strand, 3703835 - 3703887
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  3703835 atactgcaccgatacgtcgatacgaaaaaatttcaaaaattaagatacgatac 3703887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 10764210 - 10764151
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| ||||||||| |||||| ||||| | |||||||||||||||||||||||||||||    
T  10764210 gatacgatactgcactgatacgctgatatgaaaaaatttcaaaaatcaagatacgatacg 10764151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 1037107 - 1037062
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatac 165  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||    
T  1037107 aagcccggatacgagatacgatacggatacgatactgcaccgatac 1037062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 1044013 - 1043968
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatac 165  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||    
T  1044013 aagcccggatacgagatacgatacggatacgatactgcaccgatac 1043968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 34096079 - 34096163
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    |||||||  ||||||||||||||||| ||| ||||| |||| ||     ||| |||||||||||||||||||||||||||| ||||||||    
T  34096079 ccggatacaagatacgatacggatacgatattgcactgatatgt-----cgggaaaatttcaaaaatcaagatacgatacggctgagata 34096163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 14167613 - 14167570
Alignment:
Q  177 aaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  14167613 aaaatttcaaaaatcaagatacgatacggctgagatacgttaat 14167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 37922772 - 37922714
Alignment:
Q  162 atacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||| ||||| ||| |||||||||||||||||||| ||| ||||| |||||    
T  37922772 atacgttgatacagaaaatttttaaaaatcaagatacgatacggctgggatacgttaat 37922714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 43190382 - 43190263
Alignment:
Q  118 taaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacatt 217  Q
    |||||||  |||| |||||| ||||||||||| ||||||||||||||||        | |||||||||||||||||||||||||||  ||| ||||| ||    
T  43190382 taaagccttgataggagatatgatacggatacgatactgcaccgatacg--------ggaaaatttcaaaaatcaagatacgatacagctgggatacgtt 43190291  T
Q  218 aatnnnnnnnnttatataattaaatgta 245  Q
    |||        |||||||||||||||||    
T  43190290 aataaaaaaaattatataattaaatgta 43190263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 24852075 - 24852023
Alignment:
Q  168 tgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| ||||||||||| ||||||||||||| |||||||||| ||||| |||||    
T  24852075 tgatgcggaaaaattttaaaaatcaagataagatacgactgggatacgttaat 24852023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 14334848 - 14334797
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| | |||||||||||||||||||||||||| ||| ||||| |||||    
T  14334848 gatacgggagaatttcaaaaatcaagatacgatacggctgtgatacgttaat 14334797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 38949235 - 38949184
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||| |||||||||| ||||||||||||| ||| ||||| |||||    
T  38949235 gatacggaaaattttcaaaaattaagatacgatacggctgggatacgttaat 38949184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 24589355 - 24589408
Alignment:
Q  143 cggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagat 196  Q
    ||||||| |||||||| | ||| |||||||||||||||||| |||||| |||||    
T  24589355 cggataccatactgcatcaatatgttgatacggaaaaattttaaaaattaagat 24589408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 1e-37; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 118 - 245
Target Start/End: Complemental strand, 40499526 - 40499399
Alignment:
Q  118 taaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacatt 217  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||||| ||    
T  40499526 taaagcccggatacgagatacgatacggatacgatactgcaccgatatgttgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgtt 40499427  T
Q  218 aatnnnnnnnnttatataattaaatgta 245  Q
    |||        |||||||||||||||||    
T  40499426 aataaaaaaaattatataattaaatgta 40499399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 52685043 - 52684943
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  52685043 aagcccggatacaagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 52684944  T
Q  220 t 220  Q
    |    
T  52684943 t 52684943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 1529161 - 1529036
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  1529161 aagctcggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 1529062  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  1529061 taaaaaaaattatataattaaatgta 1529036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 37996279 - 37996404
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||| ||||    
T  37996279 aagcccggatacgagatacgatacggatacgatactgcaccgatacgttgatatggaaaaatttcaaaaatcaagatacgatatggctgggatacgttaa 37996378  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  37996379 taaaaaaaattatataattaaatgta 37996404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 7328354 - 7328254
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||  ||| ||||| ||||    
T  7328354 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacagctgggatacgttaa 7328255  T
Q  220 t 220  Q
    |    
T  7328254 t 7328254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 245
Target Start/End: Original strand, 1678665 - 1678786
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnn 223  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||| |||||       
T  1678665 ccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggtaaaatttcaaaaatcaagatacgatacggctgggatacgttaataaa 1678764  T
Q  224 nnnnnttatataattaaatgta 245  Q
         |||||||||||||||||    
T  1678765 aaaaattatataattaaatgta 1678786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 22289221 - 22289314
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||| ||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  22289221 gatacgagatatgatacagatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgatacgactgagatacgttaat 22289314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 28882058 - 28882158
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||| ||||| ||||    
T  28882058 aagcctggatacgagatacgatacagatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatgaagatacgatacggctgggatacgttaa 28882157  T
Q  220 t 220  Q
    |    
T  28882158 t 28882158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 42230496 - 42230396
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||| ||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||| ||||||||| ||||    
T  42230496 aagcctggatacgagatatgatacggatacgatactgcaccgatacgtcgatacgagaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 42230397  T
Q  220 t 220  Q
    |    
T  42230396 t 42230396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 120 - 219
Target Start/End: Original strand, 22610255 - 22610354
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||||  ||||| ||||| |||||||||||||||||||||||| ||||||||| ||||    
T  22610255 aagcccagatacgagatacgatacggatacgatactgcaccgatacgccgatacagaaaattttcaaaaatcaagatacgatacggctgagatacgttaa 22610354  T

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Target: chr3; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 25936056 - 25936140
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||| |||||| |||||||||||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  25936056 aagctcggatacgagatacgatacagatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacg 25936140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 39665013 - 39664917
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| |||||||||||||||||| |||||| || ||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  39665013 ccggatacgagatacgatacggatacgatactgtactgatacgtcgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 39664917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 21005765 - 21005865
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| |||||||||||||||||  ||||||||||||||||| |||| | |||||||||||||||||||||| |||||| ||| ||||| ||||    
T  21005765 aagctcggatacgagatacgatacggatatgatactgcaccgatacgtcgatatgaaaaaatttcaaaaatcaagataggatacggctgggatacgttaa 21005864  T
Q  220 t 220  Q
    |    
T  21005865 t 21005865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 28705873 - 28705793
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||||||| ||||||    
T  28705873 ccggatacgagatacgatacggatacgatactgcaccgatacgtcgatgcggcaaaatttcaaaaatcaagatatgatacg 28705793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 35390485 - 35390385
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||  |||||||||||||||||||||| || ||||||| |||||| ||||||||||||| ||| ||||| ||||    
T  35390485 aagcctggatacgagatacgatacggatatgatactgcaccgatacgttgatatgggaaaattttaaaaattaagatacgatacggctgggatacgttaa 35390386  T
Q  220 t 220  Q
    |    
T  35390385 t 35390385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 213116 - 212991
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||||||||||||||||  |||  |||||||| |  ||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  213116 aagctcggatatgagatacgatacaaatatgatactgcatcagtacgtcgatacggaaaaatttcaaaaatcaatatatgatacgactgagatacgttaa 213017  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  213016 taaaaaaaattatataattaaatgta 212991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 10224135 - 10224228
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||||||||| ||||| || ||||||||  |||||||||||||| |||||||||||||||||||| ||| ||||| |||||    
T  10224135 gataagagatacgatacggatacgatactacatcgatacgtcaatacggaaaaattttaaaaatcaagatacgatacggctgggatacgttaat 10224228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 19422034 - 19421953
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgat 201  Q
    ||||||||||| |||||| |||||| |||| ||||||||| ||||||| |||| ||||||||||||||||||||||||||||    
T  19422034 aagcccggatacgagatatgatacgaatacgatactgcactgatacgtcgatatggaaaaatttcaaaaatcaagatacgat 19421953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 19877741 - 19877837
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| ||||||||||||||||||||||||| | |||||   ||||||||||||||||||||||| ||||||||||| || || ||||| |||||    
T  19877741 ccggatacgagatacgatacggatacaatactgtatcgatagactgatacggaaaaatttcaaaaattaagatacgatatgattgtgatacgttaat 19877837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 33241449 - 33241374
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  33241449 gatacgatactgcaccgatacgttaatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 33241374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 52501262 - 52501331
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| |||||    
T  52501262 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgtgatac 52501331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 13748017 - 13748117
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||  |||||| || || |||| ||||||| ||||||| ||||||||||||||||| || ||| ||||| ||||    
T  13748017 aagcccggatacgagatacgatacggataagatactgtactgaaacgtcgatacgggaaaattttaaaaatcaagatacgatgcggctgggatacgttaa 13748116  T
Q  220 t 220  Q
    |    
T  13748117 t 13748117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 220
Target Start/End: Complemental strand, 22311457 - 22311370
Alignment:
Q  133 agatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||| |||||| ||||||||||||||| |  |||||||||||||||||||||||||| | ||| ||||| |||||    
T  22311457 agatatgatacggatacgatactgtaccgatacgttgatatgagaaaatttcaaaaatcaagatacgatatggctgggatacgttaat 22311370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 28969082 - 28969031
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  28969082 gatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 28969031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 29916366 - 29916307
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  29916366 gatacgatactgcaccgatacgatgatatgggaaaatttcaaaaatcaagatacgatacg 29916307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 29965519 - 29965460
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| |||||||||||||||| ||||| || ||||||||||||||||||||||||||||    
T  29965519 gatacgatactgcaccgatacgatgatatgggaaaatttcaaaaatcaagatacgatacg 29965460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Original strand, 45532064 - 45532123
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  45532064 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaataaagatacgatacg 45532123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 48333516 - 48333441
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||| ||| |||| |||||||||||||||||||| |||||  ||| |||||||||||    
T  48333516 gatacgatactgcaccgatacgtcgatgcggataaatttcaaaaatcaagatatgatactgctgggatacattaat 48333441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 13352746 - 13352800
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacg 199  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  13352746 gatacgatactgcacagatacgttgatatggaaaaatttcaaaaatcaagatacg 13352800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 245
Target Start/End: Complemental strand, 52121889 - 52121778
Alignment:
Q  126 ggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnn 225  Q
    ||||| |||||||| ||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||| ||| ||||| |||||         
T  52121889 ggatacgagatacggtacggatacgatactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgatacggctgggatacgttaataaaaa 52121798  T
Q  226 nnnttatataattaaatgta 245  Q
       |||||||||||||||||    
T  52121797 aaattatataattaaatgta 52121778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 45348149 - 45348049
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| |||||| || ||||||| ||||||| ||||||||||||||||| |||||||||| ||| ||||| |||||        ||||||||||||||||    
T  45348149 gatacgatactgtactgatacgtcgatacgggaaaatttcaaaaatcaaaatacgatacggctgtgatacgttaataaaaaaaattatataattaaatgt 45348050  T
Q  245 a 245  Q
    |    
T  45348049 a 45348049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 53193011 - 53192911
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||||||||||| ||  |||||| ||||| ||||||||||||||||||||||| ||| ||||| |||||        ||||||||||||||||    
T  53193011 gatacgatactgcaccgattcgccgatacgaaaaaaattcaaaaatcaagatacgatacggctgggatacgttaataaaaaaaattatataattaaatgt 53192912  T
Q  245 a 245  Q
    |    
T  53192911 a 53192911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 48123918 - 48123867
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||| |||||    
T  48123918 gatacggaaaaatttcaaaaatcaagatatgatacgactgtgatacgttaat 48123867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 48334461 - 48334386
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| |||||| |||||||||| ||||| || ||||||||||||||||||||||||||  ||| ||||| |||||    
T  48334461 gatacgatactgtaccgatacgtcgatacagataaatttcaaaaatcaagatacgatactgctgggatacgttaat 48334386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 19349142 - 19349242
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||| ||| |||| || || |||| |||||||||||||||||||||||||||| ||| ||||| |||||        ||||||||||||||||    
T  19349142 gatacgatactacactgatatgtcgacacggtaaaatttcaaaaatcaagatacgatacggctgtgatacgttaataaaaaaaattatataattaaatgt 19349241  T
Q  245 a 245  Q
    |    
T  19349242 a 19349242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 41741676 - 41741748
Alignment:
Q  132 gagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||||||||||| ||||  ||||||||  ||||||| ||||||  ||||||||||||||||| ||||||||||    
T  41741676 gagatacgatacagatatgatactgcattgatacgtcgatacgagaaaatttcaaaaatcaatatacgatacg 41741748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 169 - 245
Target Start/End: Original strand, 42464165 - 42464241
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    ||||||||||||||||||||||||||||||||||||  || ||||| |||||        |||||||||||||||||    
T  42464165 gatacggaaaaatttcaaaaatcaagatacgatacggatgggatacgttaataaaaaaaattatataattaaatgta 42464241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 204
Target Start/End: Original strand, 7899266 - 7899301
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||||||||||||||||||||||||||||||||    
T  7899266 gatacggaaaaatttcaaaaatcaagatacgatacg 7899301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 45056828 - 45056883
Alignment:
Q  152 tactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgact 207  Q
    ||||||||  |||||| ||||| |||||||||||||||||||||||||||| ||||    
T  45056828 tactgcactaatacgtcgatacagaaaaatttcaaaaatcaagatacgatatgact 45056883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 7754691 - 7754626
Alignment:
Q  134 gatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacg 199  Q
    ||||| |||||||||  |||| |||||||||||| ||||||| ||||||| |||| ||||||||||    
T  7754691 gatacaatacggatatgatacggcaccgatacgtcgatacgggaaaattttaaaattcaagatacg 7754626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 123 - 220
Target Start/End: Original strand, 30786241 - 30786338
Alignment:
Q  123 cccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| ||| |||||||||| ||||||| ||||| || ||||| || | |||||||||| || | |||||||||||||||||  ||| ||||| |||||    
T  30786241 cccgtatacgagatacgattcggatactatactacaacgatatgtcggtacggaaaaaatttataaatcaagatacgatacagctgggatacgttaat 30786338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 2123297 - 2123228
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||| |||||||||||||||||| |||||| |||||||||        ||||||||||||||||||| ||||||||||    
T  2123297 gatacgagatacgatacggatacgatactgtaccgatacg--------gaaaaatttcaaaaatcaaaatacgatacg 2123228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 38888596 - 38888693
Alignment:
Q  115 ctctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    ||||||| | |||||||||||||| |||| ||||| |||||||||        |||||||  ||||||| ||||||||||||| |||||| |||||||||    
T  38888596 ctctaaaactcggatatgagatacaatacagatacgatactgcac--------tgatacgagaaaatttaaaaaatcaagatatgatacggctgagatac 38888687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 245
Target Start/End: Original strand, 50286762 - 50286849
Alignment:
Q  157 caccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||| |||||||||||||| |||| ||||||||| ||||||||||||| ||| ||||| |||||        |||||||||||||||||    
T  50286762 caccaatacgttgatacgggaaaaattcaaaaattaagatacgatacggctg-gatacgttaataaaataaattatataattaaatgta 50286849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 2566727 - 2566778
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| ||||||||||||||||||||||||||||| | ||| ||||| |||||    
T  2566727 gatatggaaaaatttcaaaaatcaagatacgatatggctgggatacgttaat 2566778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 200
Target Start/End: Complemental strand, 25701334 - 25701303
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacga 200  Q
    ||||||||||||||||||||||||||||||||    
T  25701334 gatacggaaaaatttcaaaaatcaagatacga 25701303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 47642582 - 47642531
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||| |||||||| ||| ||||||||| |||||||||||||||| |||||    
T  47642582 gatacgaaaaaattttaaacatcaagatatgatacgactgagatacgttaat 47642531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 8352027 - 8352112
Alignment:
Q  134 gatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| |||||||| ||||   ||||||||| |||||||  |||||||||||| ||||||||  ||||| ||||||||| |||||    
T  8352027 gatacgacacggatacgatacgataccgatacgatgatacgtgaaaatttcaaaattcaagata-aatacggctgagatactttaat 8352112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 47750476 - 47750553
Alignment:
Q  168 tgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||||| ||||  ||| |||||||||||||||||||||| ||||||| |||||        |||||||||||||||||    
T  47750476 tgatacagaaattttttaaaaatcaagatacgatacgaccgagatacgttaataaaaaaaattatataattaaatgta 47750553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 204
Target Start/End: Original strand, 13803388 - 13803432
Alignment:
Q  160 cgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||| |||||||| |||||||||||| |||||| ||||||||    
T  13803388 cgatacgctgatacgggaaaatttcaaaattcaagaaacgatacg 13803432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 78; Significance: 2e-36; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 9249714 - 9249839
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  9249714 aagcccggatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 9249813  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  9249814 taaaaaaaattatataattaaatgta 9249839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 9283264 - 9283389
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  9283264 aagcccggatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 9283363  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  9283364 taaaaaaaattatataattaaatgta 9283389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 25970219 - 25970094
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  25970219 aagcccggatacgagatacgatacggatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 25970120  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  25970119 taaaaaaaattatataattaaatgta 25970094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 1042558 - 1042658
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  1042558 aagcctggatacgagatacgatacggatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 1042657  T
Q  220 t 220  Q
    |    
T  1042658 t 1042658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 40096797 - 40096697
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  40096797 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 40096698  T
Q  220 t 220  Q
    |    
T  40096697 t 40096697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 120 - 213
Target Start/End: Complemental strand, 12103571 - 12103478
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  12103571 aagcccagatacgagatacgatacggatacgatactgcaccgatacgctgatacggaaaaatttcaaaaatcaagatacgatacggctgagata 12103478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 27554835 - 27554960
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| ||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  27554835 aagcccggatacgagatacgatacgtatacgatactgcaccgatacgctgatacggaaaaatttcaaaaattaagatacgatacggctgggatacgttaa 27554934  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  27554935 taaaaaaaattatataattaaatgta 27554960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 42897530 - 42897405
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  42897530 aagcccggatacgagatacgatacggatacgacactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 42897431  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  42897430 taaaaaaaattatataattaaatgta 42897405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 19511294 - 19511194
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  19511294 aagcctggatacgagatacgatacagatacgatactgcaccgatacgtcgatacgggaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 19511195  T
Q  220 t 220  Q
    |    
T  19511194 t 19511194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 34122123 - 34122208
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacga 205  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  34122123 aagcccggatacgagatacgatacggatacgatactgcactgatacgtcgatacgaaaaaatttcaaaaatcaagatacgatacga 34122208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 39521703 - 39521579
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  39521703 aagcccggatacgagatacgatacggatatgatactgcatcgatacgtcgatacggaaaaatttcaaaaatcaa-atacgatacggctgagatacgttaa 39521605  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  39521604 taaaaaaaattatataattaaatgta 39521579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 554422 - 554510
Alignment:
Q  132 gagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  554422 gagatacgatacggatacaatactgcaccgatacgccgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 554510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 48154649 - 48154565
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||    
T  48154649 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacgagaaaatttcaaaaatcaagatacgatacg 48154565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 26973657 - 26973568
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactga 209  Q
    ||||||||||| ||||||||||||| |||| ||||||||  ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  26973657 aagcccggatacgagatacgatacgaatacgatactgcattgatacgccgatacggaaaaatttcaaaaatcaagatacgatacgactga 26973568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 4292296 - 4292196
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| | ||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| ||| ||||| ||||    
T  4292296 aagcctggatacgtgatacgatatggatacgatactgcaccgatacgttgatatgggaaaatttcaaaaatcaagatacgatacggctgtgatacgttaa 4292197  T
Q  220 t 220  Q
    |    
T  4292196 t 4292196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 26773070 - 26773170
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||| ||||||||||||| ||||||||| ||||||| ||||||| ||||||| |||||||||||||||||||| ||| ||||||||||    
T  26773070 aagcctggatacgagaaacgatacggatacgatactgcactgatacgtcgatacgggaaaattttaaaaatcaagatacgatacggctgggatacattaa 26773169  T
Q  220 t 220  Q
    |    
T  26773170 t 26773170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 26843574 - 26843649
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26843574 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatgcgactgagatacattaat 26843649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 36413967 - 36413867
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| ||||||||||||| |||  ||||||||| ||||||| ||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  36413967 aagctcggatacgagatacgatacgaatatgatactgcactgatacgtcgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 36413868  T
Q  220 t 220  Q
    |    
T  36413867 t 36413867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 27397120 - 27397195
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  27397120 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacattaat 27397195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 16563758 - 16563816
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16563758 gatacaatattgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 16563816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 16601904 - 16601846
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16601904 gatacaatattgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 16601846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 214
Target Start/End: Complemental strand, 38065298 - 38065220
Alignment:
Q  136 tacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||||||||||||  |||||||||    
T  38065298 tacgatacggatacgatactgcaccgatatgccgatacggaaaaatttcaaaaatcaagatacgatacagctgagatac 38065220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 47237728 - 47237817
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    ||||||| |||||||||||| ||||| |||||||||||||| ||| ||| || |||||||||||||||||||||||||||| ||| ||||    
T  47237728 ccggatacgagatacgatacagatacgatactgcaccgatatgttaatatgggaaaatttcaaaaatcaagatacgatacggctgtgata 47237817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 21180437 - 21180337
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| |||||| ||||||||||| |||||||| ||||||| |||||||||||| |||||||| | ||||||||||||| |||||| || ||||    
T  21180437 aagcacggatacgagatatgatacggatacgatactgcatcgatacgctgatacggaaaactttcaaaatttaagatacgatacggctgagaaacgttaa 21180338  T
Q  220 t 220  Q
    |    
T  21180337 t 21180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 47718670 - 47718754
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||| ||| ||||||||||| |||||| ||||||||||||||||  ||| |||||||| ||||||||||||||||| |||||    
T  47718670 aagcccgaatacgagatacgataaggatacgatactgcaccgatacgccgatgcggaaaaaattcaaaaatcaagatacaatacg 47718754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 34238696 - 34238604
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||        |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  34238696 aagcccggatacgagatacgatacggatacgacactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 34238605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 245
Target Start/End: Complemental strand, 16851437 - 16851315
Alignment:
Q  115 ctctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||| ||||||||||| ||||||||||| |||||| ||||||||||||||||        |||||||||||||||| ||||||||||||| ||| |||||    
T  16851437 ctctgaagcccggatacgagatacgatatggatacgatactgcaccgatacg--------gaaaaatttcaaaaattaagatacgatacggctgtgatac 16851346  T
Q  215 attaatnnnnnnnnttatataattaaatgta 245  Q
     |||||        |||||||||||||||||    
T  16851345 gttaataaaaaaaattatataattaaatgta 16851315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 48164048 - 48163932
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  48164048 aagcccggatacgagatacaatacggatacgatactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgatacggctg-gatacgttaa 48163958  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  48163957 taaaaaaaattatataattaaatgta 48163932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 21409977 - 21409885
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||| ||| |||||||||||||| |        |||||||||||||||||||||||||||||  ||| ||||||||||    
T  21409977 aagcccggatacgagatacgatacgggtacgatactgcaccgatatg--------gaaaaatttcaaaaatcaagatacgatacagctgggatacattaa 21409886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 36661592 - 36661500
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| |||||||||||||||||||||| ||||||| ||||||||        |||||||||||||||||||||||||||||  ||| ||||| ||||    
T  36661592 aagcccgaatatgagatacgatacggatacgatactgcgccgatacg--------gaaaaatttcaaaaatcaagatacgatacagctgggatacgttaa 36661501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 36757560 - 36757611
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  36757560 gatacagaaaaatttcaaaaatcaagatacgatacggctgagatacattaat 36757611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 36767084 - 36767135
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  36767084 gatacagaaaaatttcaaaaatcaagatacgatacggctgagatacattaat 36767135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 151 - 209
Target Start/End: Complemental strand, 35160450 - 35160392
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactga 209  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  35160450 atactgcatcgatacgtcgatacggaaaaattttaaaaatcaagatacgatacggctga 35160392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 36763339 - 36763389
Alignment:
Q  170 atacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  36763339 atacagaaaaatttcaaaaatcaagatacgatacggctgagatacattaat 36763389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 11830821 - 11830704
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| ||| |||||||||||||||||| ||||||||||        |||| ||||||||||||||||| ||||||||||||| ||| ||||| ||||    
T  11830821 aagcccgaatacgagatacgatacggatacgatactgcacc--------gataaggaaaaatttcaaaaattaagatacgatacggctgggatacgttaa 11830730  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  11830729 taaaaaaaattatataattaaatgta 11830704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 23078605 - 23078705
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| ||||||| |||||||||| |||||| |||||||| | |||||| |||| ||||||||||| | ||| |||| | ||| ||||| ||||    
T  23078605 aagcccggatacgagatacaatacggatacgatactgtaccgatacatcgatacgaaaaagtttcaaaaatcgaaatatgatatggctgggatacgttaa 23078704  T
Q  220 t 220  Q
    |    
T  23078705 t 23078705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 27354562 - 27354445
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  ||||||||||||||||| |||||||| |||||||        |||||||||||||||||||||||| ||||| ||| ||||| ||||    
T  27354562 aagcccggatacaagatacgatacggatacgatactgcatcgatacg--------gaaaaatttcaaaaatcaagatacaatacggctgggatacgttaa 27354471  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  27354470 taaaaaaaattatataattaaatgta 27354445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 8029411 - 8029336
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||| ||||||  |||| || |||||||||||||||||||||||||||| ||| ||||| |||||    
T  8029411 gatacgatactgcactgatacgccgatatgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 8029336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 220
Target Start/End: Complemental strand, 11058986 - 11058933
Alignment:
Q  167 ttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||| ||||||||||||  ||| |||||||||||    
T  11058986 ttgatacggaaaaatttcaaaaattaagatacgatactgctgggatacattaat 11058933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 15877970 - 15878021
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||| |||||||||||||||||||| |||| |||||||||| |||||    
T  15877970 gatacggaagaatttcaaaaatcaagatacaatacaactgagatacgttaat 15878021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 33454676 - 33454625
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  33454676 gatatggaaaaatttcaaaaatcaagatacgatacggctgtgatacgttaat 33454625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 245
Target Start/End: Original strand, 44958864 - 44958958
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    ||||||||||||||||  ||||| ||||| ||| ||||||||||||| |||||| ||| ||||| |||||        |||||||||||||||||    
T  44958864 atactgcaccgatacggcgatacagaaaatttttaaaaatcaagatatgatacggctgtgatacgttaataaaaaaaattatataattaaatgta 44958958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 24956837 - 24956759
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    ||||||| ||||||||||||  |||| ||||||||| |||||||  ||||    ||||||||||||||||||||||||||    
T  24956837 ccggatacgagatacgataca-atacgatactgcactgatacgtcaatacaaggaaatttcaaaaatcaagatacgatac 24956759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 35136601 - 35136542
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| |||| ||||||||||| ||||| |||||| |||||||||| ||||| |||||||    
T  35136601 gatacgatacggcaccgatacgctgataaggaaaattttcaaaaattaagatgcgatacg 35136542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 31186932 - 31187057
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  31186932 aagctcggatatgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 31187031  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  31187032 taaaaaaaattatataattaaatgta 31187057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 1035794 - 1035894
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  1035794 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 1035893  T
Q  220 t 220  Q
    |    
T  1035894 t 1035894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 234915 - 234790
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  234915 aagcctggatacgagatacgatacggatacgatactgcattgatacgttgatacgggaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 234816  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  234815 taaaaaaaattatataattaaatgta 234790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 124 - 245
Target Start/End: Complemental strand, 19128750 - 19128629
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnn 223  Q
    ||||||| |||||||||||||||||| ||||| ||| ||||||||||||||  ||||||||||||||||||||| |||||| || ||||||||||||       
T  19128750 ccggatacgagatacgatacggatacgatactacactgatacgttgatacgtgaaaatttcaaaaatcaagataagatacggctaagatacattaataaa 19128651  T
Q  224 nnnnnttatataattaaatgta 245  Q
         |||||||||||||||||    
T  19128650 aaaaattatataattaaatgta 19128629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 32018788 - 32018695
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||||||||| ||| |||||| |||||| ||||||||||||||||||||||||| |||||||||| ||| ||||| |||||    
T  32018788 gatacgagatacgatacggatacgataatgcaccaatacgtagatacggaaaaatttcaaaaatcaaaatacgatacggctgggatacgttaat 32018695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 3213259 - 3213159
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||| |||||        ||||||||||||||||    
T  3213259 gatacgataccgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacagctgagatacgttaataaaaaaaattatataattaaatgt 3213160  T
Q  245 a 245  Q
    |    
T  3213159 a 3213159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 145 - 203
Target Start/End: Original strand, 13607299 - 13607357
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13607299 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatac 13607357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 220
Target Start/End: Complemental strand, 7255520 - 7255439
Alignment:
Q  139 gatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||| |||| |||||||||||||||||  |||| |||||||||||||||| || |||||||||||||||||||| |||||    
T  7255520 gatacgaatacgatactgcaccgatacgtctatacagaaaaatttcaaaaattaaaatacgatacgactgagatacgttaat 7255439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 7187765 - 7187857
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||        |||||| ||||||||||||||||||||||||||||| ||| ||||| ||||    
T  7187765 aagcccggatacgagatacgatacggatacgatactgcacc--------gatacgaaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 7187856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 31738146 - 31738271
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| ||||||| ||||| |||| |||||||||||||||   ||||||  |||||||||||||||||||||||||||| |||  |||| ||||    
T  31738146 aagcctggatacgagatacaatacgaatacgatactgcaccgatacaccgatacgtgaaaatttcaaaaatcaagatacgatacggctggaatacgttaa 31738245  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  31738246 taaaaaaaattatataattaaatgta 31738271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 245
Target Start/End: Complemental strand, 8357972 - 8357896
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgta 245  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||        |||||||||||||||||    
T  8357972 gatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaataaaaaaaattatataattaaatgta 8357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 4153066 - 4153159
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||| | ||| |||||||||||||||  |||||| ||||| |||||||||| |||||||||| || ||| ||||| |||||    
T  4153066 gatacgagatacgatacaggtacgatactgcaccgatacactgatacagaaaattttcaaaaattaagatacgatgcggctgtgatacgttaat 4153159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 32130062 - 32130162
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||| ||||||||||||||||  | |||||||||||||||||||||||||||| |||  |||| |||||        ||||||||||||||||    
T  32130062 gatacgatactacaccgatacgttgatatcggaaaatttcaaaaatcaagatacgatacggctggaatacgttaataaaaaaaattatataattaaatgt 32130161  T
Q  245 a 245  Q
    |    
T  32130162 a 32130162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 6707510 - 6707586
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||||||| |||||||||||||||||| ||| ||||||        ||||||||||||||| ||||||||||||||||||||    
T  6707510 aagcccggatacgagatacgatacggatacgatattgcacc--------gatacggaaaaattttaaaaatcaagatacgatacg 6707586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 10893749 - 10893800
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  10893749 gatacgggaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 10893800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 26327894 - 26327843
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  26327894 gatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 26327843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 3300019 - 3299950
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||| || |||||||||||| |||||||||| |||||| ||||||||||||  ||||||||| |||||    
T  3300019 atactgtactgatacgttgatatggaaaaattttaaaaattaagatacgatacagctgagatacgttaat 3299950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 151 - 220
Target Start/End: Original strand, 13060902 - 13060971
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||||||||| |||| ||||||||||| |||||||||||||  |||| ||| ||||| |||||    
T  13060902 atactgcaccgatacgtcgatatggaaaaatttcgaaaatcaagatacagtacggctgtgatacgttaat 13060971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 213
Target Start/End: Original strand, 13044909 - 13044971
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    ||||||||||||||||| |||| | |||| |||| ||||||||||||||||||| ||| ||||    
T  13044909 atactgcaccgatacgtcgatatgaaaaattttcgaaaatcaagatacgatacggctgggata 13044971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 11105904 - 11105807
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  || ||||||| |||| ||||||||||   |||||| |||||| || ||||||||||| |||| ||| ||||| ||| ||||| ||||    
T  11105904 aagcccggatacaaggtacgatatggattcaatactgca---atacgtcgatacgaaataatttcaaaaaccaagttacaatacggctgggatacgttaa 11105808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 24875 - 24975
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  24875 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgtgatacgttaa 24974  T
Q  220 t 220  Q
    |    
T  24975 t 24975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 7e-36; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 34900349 - 34900449
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||| ||||    
T  34900349 aagcccggatacgagatacgatacggatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 34900448  T
Q  220 t 220  Q
    |    
T  34900449 t 34900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 16385176 - 16385051
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||| ||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  16385176 aagcccggatacgagatatgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 16385077  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  16385076 taaaaaaaattatataattaaatgta 16385051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 22200798 - 22200898
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||  ||| ||||| ||||    
T  22200798 aagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacagctgggatacgttaa 22200897  T
Q  220 t 220  Q
    |    
T  22200898 t 22200898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 220
Target Start/End: Original strand, 2871500 - 2871581
Alignment:
Q  139 gatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  2871500 gatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacattaat 2871581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 4247065 - 4246940
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||| | ||| ||||| ||||    
T  4247065 aagcccggatacgagatacgatacagatacgatactgcaccgatacgtcgatacggcaaaatttcaaaaatcaagatacgatatggctgggatacgttaa 4246966  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  4246965 taaaaaaaattatataattaaatgta 4246940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 28875543 - 28875668
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  28875543 aagccctgatacgagatacgatacggatacgatactgcatcgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 28875642  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  28875643 taaaaaaaattatataattaaatgta 28875668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 36484557 - 36484464
Alignment:
Q  127 gatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| |||||||||||||||||| ||||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||    
T  36484557 gatacgagatacgatacggatacgatactgcactgatacgtcgatacggaaaattttcaaaaatcaagatacgatacggctgagatacgttaat 36484464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 32878196 - 32878096
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  32878196 aagcctggatacgagatacgatacggatacgatactgcaccgatacgccgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 32878097  T
Q  220 t 220  Q
    |    
T  32878096 t 32878096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 6029194 - 6029100
Alignment:
Q  126 ggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| |||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||  ||| ||||| |||||    
T  6029194 ggatacgagatacgatacggatacgatactgcaccgatacgtcgatacagaaaaatttcaaaaatcaagatacgatacagctgggatacgttaat 6029100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 13422759 - 13422659
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||  |||| |||||| ||| |||||||||||||||||||| ||| ||||| ||||    
T  13422759 aagcccggatacgagatacgatacggatacgatactgcaccgatacgccgatatggaaaatttttaaaaatcaagatacgatacggctgggatacgttaa 13422660  T
Q  220 t 220  Q
    |    
T  13422659 t 13422659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 12579515 - 12579632
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  12579515 aagcccggatacgagatacgatacggatacaatactgcacc--------gatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 12579606  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  12579607 taaaaaaaattatataattaaatgta 12579632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 19436967 - 19436867
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||        ||||||||||||||||    
T  19436967 gatacgatactgcaccgatacattgatacgggaaaatttcaaaaatcaagatacgatacggctgagatacgttaataaaaaaaattatataattaaatgt 19436868  T
Q  245 a 245  Q
    |    
T  19436867 a 19436867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 19573116 - 19573016
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||        ||||||||||||||||    
T  19573116 gatacgatactgcaccgatacattgatacgggaaaatttcaaaaatcaagatacgatacggctgagatacgttaataaaaaaaattatataattaaatgt 19573017  T
Q  245 a 245  Q
    |    
T  19573016 a 19573016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 5540553 - 5540461
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||||||| ||||| ||||    
T  5540553 aagcccggatacgagatacgatacggatacgatactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgatacgactgggatacgttaa 5540462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 25022867 - 25022792
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  25022867 gatacgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatacggctgtgatacgttaat 25022792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 32425503 - 32425403
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  ||||||||||||||||  |||||||||| |||    |||||||||||||||||||||||||||||||||||| || |||||| ||||    
T  32425503 aagcccggatacaagatacgatacggatatgatactgcaccaatataccgatacggaaaaatttcaaaaatcaagatacgatacggctaagatacgttaa 32425404  T
Q  220 t 220  Q
    |    
T  32425403 t 32425403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 37372846 - 37372746
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| ||| ||||||| |||||||||| |||||||| | ||| |||||||| | ||||||||||||||||||||||||||||| || ||||| ||||    
T  37372846 aagcccgcatacgagatacaatacggatacgatactgcatcaatatgttgatacaggaaaatttcaaaaatcaagatacgatacgattgggatacgttaa 37372747  T
Q  220 t 220  Q
    |    
T  37372746 t 37372746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 37669683 - 37669583
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| |||||        ||||||||||||||||    
T  37669683 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaataaaaaaaattatataattaaatgt 37669584  T
Q  245 a 245  Q
    |    
T  37669583 a 37669583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 5817859 - 5817951
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||        | |||||||||||||||||||||||||||| ||||||||| ||||    
T  5817859 aagcccgaatacgagatacgatacggatacaatactgcaccgatacg--------ggaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 5817950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 43770706 - 43770781
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  43770706 gatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 43770781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 45216200 - 45216275
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaaga 195  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||| ||||  |||||||||||||||||||||    
T  45216200 aagcccggatacgagatacgatacggatacgatactgcactgatacgtcgatatagaaaaatttcaaaaatcaaga 45216275  T

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Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 115 - 245
Target Start/End: Original strand, 32638187 - 32638317
Alignment:
Q  115 ctctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||| ||||||||||| |||||| |||||| |||  ||||  |||||||||   ||||||||||||||||||||||||||||||||||||  ||||||||    
T  32638187 ctctgaagcccggatacgagataagatacgaatatgatacaacaccgatacaccgatacggaaaaatttcaaaaatcaagatacgatacggttgagatac 32638286  T
Q  215 attaatnnnnnnnnttatataattaaatgta 245  Q
     |||||        |||||||||||||||||    
T  32638287 gttaataaaaaaaattatataattaaatgta 32638317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 214
Target Start/End: Original strand, 19947380 - 19947449
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| ||| |||||    
T  19947380 gatacgatactgcaccgatacgttgatacgtgaaaatttcaaaaatcaagatacgatacggctgtgatac 19947449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 32760487 - 32760395
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| |||||||||||||||||| |||||||| |||||||        ||||| |||||||||||||||||||||||||||||||||| ||||    
T  32760487 aagcccagatacgagatacgatacggatacgatactgcatcgatacg--------gaaaattttcaaaaatcaagatacgatacgactgagatacgttaa 32760396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 3892558 - 3892479
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacg 199  Q
    |||| |||||| |||||  |||||| |||| ||| |||||||||| ||||||||||||||||||||||||| ||||||||    
T  3892558 aagctcggatacgagatttgatacgaatacgatattgcaccgatatgttgatacggaaaaatttcaaaaattaagatacg 3892479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 41098489 - 41098539
Alignment:
Q  170 atacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  41098489 atacggaaaaatttcaaaaatcaagatacgatacgactgggatacgttaat 41098539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 38389250 - 38389206
Alignment:
Q  160 cgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||    
T  38389250 cgatacgttgatatggaaaaatttcaaaaatcaagatacggtacg 38389206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 7413032 - 7412953
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    |||||||||| |||||||  |||||| |||||||| | |||| | |||||||||||| ||||||||| ||||||| ||||    
T  7413032 ccggatatgacatacgatgtggatacgatactgcatcaatacttcgatacggaaaaaattcaaaaattaagatacaatac 7412953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 30804254 - 30804329
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| |||| | ||||||||| ||||| || |||| || |||| ||||||||||||||||||||||||| |||||    
T  30804254 gatacgatacggtaccgatacgctgatatgggaaaactttaaaattcaagatacgatacgactgagatactttaat 30804329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 33192 - 33106
Alignment:
Q  134 gatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||| ||||||||| ||||||| | ||||||  ||||||| ||||||||||||||||| ||| |||| | ||| ||||| |||||    
T  33192 gatacgctacggatacgatactgctctgatacgacgatacgggaaaatttcaaaaatcaaaatatgatatgtctgggatacgttaat 33106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 28738067 - 28738017
Alignment:
Q  170 atacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||| |||||    
T  28738067 atacgaaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 28738017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 213
Target Start/End: Original strand, 24100055 - 24100092
Alignment:
Q  176 aaaaatttcaaaaatcaagatacgatacgactgagata 213  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24100055 aaaaatttcaaaaatcaagatacgatacggctgagata 24100092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 12358464 - 12358419
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    ||||||| ||||||| |||| ||||||||||||||| |||||||||    
T  12358464 gatacgggaaaattttaaaattcaagatacgatacggctgagatac 12358419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 6268 - 6168
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  6268 aagcctggatacgagatacgatacggatatgatactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatacgactgggatacgttaa 6169  T
Q  220 t 220  Q
    |    
T  6168 t 6168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 12206766 - 12206666
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  12206766 aagcccggatacaagatatgatacggatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaattaagatacaatacgactgagatacattaa 12206667  T
Q  220 t 220  Q
    |    
T  12206666 t 12206666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 245
Target Start/End: Complemental strand, 7877263 - 7877138
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  7877263 aagcccggatacgagatacgatacggatacgacactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 7877164  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  7877163 taaaaaaaattatataattaaatgta 7877138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 5371695 - 5371601
Alignment:
Q  126 ggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  5371695 ggatatgagatacgatacggatacgatactgcaccgatacgccgatacgggaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 5371601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 245
Target Start/End: Original strand, 6496662 - 6496775
Alignment:
Q  132 gagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnntta 231  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||  ||||||||| |||||        |||    
T  6496662 gagatacgatacggatacgatactgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacagctgagatacgttaataaaaaaaatta 6496761  T
Q  232 tataattaaatgta 245  Q
    ||||||||||||||    
T  6496762 tataattaaatgta 6496775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 28746177 - 28746277
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||  ||||||| |||||||||||||||||||||||||||| ||| ||||| ||||    
T  28746177 aagcccggatacgagatacgatacggatacgatactgcactgatacgccgatacgggaaaatttcaaaaatcaagatacgatacggctgtgatacgttaa 28746276  T
Q  220 t 220  Q
    |    
T  28746277 t 28746277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 40431538 - 40431634
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||| ||||||| ||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||| ||||| |||||    
T  40431538 ccggatacgagatacaatacggatataatactgcaccgatacgtcgatacggaaaaattttaaaaatcaagatacgatacggctgggatacgttaat 40431634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 4562389 - 4562289
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||||||||  ||||| ||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  4562389 aagcccggatacaagatatgatacggatacgatactacaccgatacgtcgatatggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 4562290  T
Q  220 t 220  Q
    |    
T  4562289 t 4562289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 10574101 - 10574001
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||| |||||  ||| ||||| ||||    
T  10574101 aagcccggatacgagatacgatacggatatgatactgcaccgatacgctgatacgggaaaatttcaaaaatcaagatatgatacagctgtgatacgttaa 10574002  T
Q  220 t 220  Q
    |    
T  10574001 t 10574001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 220
Target Start/End: Original strand, 4169523 - 4169598
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  4169523 gatacgatactgcaccgatacgtcgatacggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaat 4169598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 12819930 - 12819820
Alignment:
Q  134 gatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttata 233  Q
    ||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| | | ||||| |||||        |||||    
T  12819930 gatacgatacggatacg-tactgcaccgatacgttgatacgggaaaatttcaaaaatcaagatacgatacggcggggatacgttaataaaaaaaattata 12819832  T
Q  234 taattaaatgta 245  Q
    ||||||||||||    
T  12819831 taattaaatgta 12819820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 115 - 220
Target Start/End: Original strand, 8482426 - 8482531
Alignment:
Q  115 ctctaaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatac 214  Q
    |||| ||||| ||||| ||||||||||| |||||| ||| | |||||||| || ||||||| ||||||||||||||||||||| |||||||||| |||||    
T  8482426 ctctgaagcctggataagagatacgatatggatacgatattacaccgatatgtcgatacgggaaaatttcaaaaatcaagataggatacgactgtgatac 8482525  T
Q  215 attaat 220  Q
     |||||    
T  8482526 gttaat 8482531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 14216753 - 14216853
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||| |||||| |||||||||||||||||| ||||| ||||||||| |  |||||  ||||||||||||||||||||||||||||  |||||||| ||||    
T  14216753 aagctcggatacgagatacgatacggatacgatactacaccgatacatcaatacgagaaaatttcaaaaatcaagatacgatacggttgagatacgttaa 14216852  T
Q  220 t 220  Q
    |    
T  14216853 t 14216853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 7806845 - 7806937
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| ||||||||||||| |||| ||||||||||||||||        | |||||||||||||||||||||||||||||||||||||| ||||    
T  7806845 aagcccggatacgagatacgatacgaatacgatactgcaccgatacg--------ggaaaatttcaaaaatcaagatacgatacgactgagatacgttaa 7806936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 34146795 - 34146702
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| |||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  34146795 aagcccagatacgagatacgatacggatacgatactgcaccgata-------acggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 34146703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 151 - 220
Target Start/End: Complemental strand, 44157165 - 44157096
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| || |||||    
T  44157165 atactgcaccgatacgtcgatacagaaaaatttcaaaaatcaagatacgatacggctgagaaacgttaat 44157096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 220
Target Start/End: Complemental strand, 1006087 - 1006011
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatc-aagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||||||||||  ||||||||||||||| |||||| |||||| |||||||||||||||    
T  1006087 gatacgatactgcaccgatacgttgatacgtgaaaatttcaaaaatcaaagatatgatacggctgagatacattaat 1006011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 220
Target Start/End: Original strand, 3545091 - 3545179
Alignment:
Q  132 gagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||| |||||||||| ||| |||||||   ||||||||||||| ||||||||||||||| || |||||| |||||    
T  3545091 gagatacgatacggatacgatactgcaccaatatgttgatataaaaaaatttcaaaactcaagatacgatacggctaagatacgttaat 3545179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 3564418 - 3564358
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacga 205  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  3564418 gatacgatactgcaccgatacgttgatacgagaaaatttcaaaaatcaagatacgatacga 3564358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 16562333 - 16562233
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||||||||||||||   ||||||||||||||||||||||||||||||||| | ||||||||| |||||        ||||||||||||||||    
T  16562333 gatacgatactgcaccgatacgccaatacggaaaaatttcaaaaatcaagatacgatatggctgagatactttaataaaaaaaattatataattaaatgt 16562234  T
Q  245 a 245  Q
    |    
T  16562233 a 16562233  T

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Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 22571523 - 22571423
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaatnnnnnnnnttatataattaaatgt 244  Q
    ||||| ||||||||| ||||||  |||||||||||||||||||||||||||||||||||| ||| ||||| |||||        ||||||||||||||||    
T  22571523 gatacgatactgcactgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaataaaaaaaattatataattaaatgt 22571424  T
Q  245 a 245  Q
    |    
T  22571423 a 22571423  T

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Target: chr2; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 35997130 - 35997030
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||| |||||   ||| |||  ||||||||| ||||||||| ||| ||||| ||||    
T  35997130 aagcccggatatgagatacgaaacggatacgatactgcaccgatacgtcgatacaagaaattttttaaaatcaaggtacgatacggctgtgatacgttaa 35997031  T
Q  220 t 220  Q
    |    
T  35997030 t 35997030  T

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Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 6125303 - 6125212
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||| ||||| |||||||||||||||||| ||||||||||||||||        |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  6125303 aagcctggatacgagatacgatacggatacgatactgcaccgatacg--------gaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 6125212  T

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Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 35342904 - 35342838
Alignment:
Q  154 ctgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||  |||||||| |||||    
T  35342904 ctgcaccgatacgccgatacggaaaaatttcaaaaatcaagatacgatacggttgagatacgttaat 35342838  T

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Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 220
Target Start/End: Complemental strand, 22485403 - 22485309
Alignment:
Q  118 taaagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacatt 217  Q
    ||||||||||||| ||||| |||||||||||| |||||||||        ||||||||| ||||||||||||||||||||||||||| ||| ||||| ||    
T  22485403 taaagcccggatacgagatgcgatacggatacgatactgcac--------tgatacggagaaatttcaaaaatcaagatacgatacggctgggatacgtt 22485312  T

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Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 18301661 - 18301602
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| |||||||||||||| || ||||||| ||||||||||||||||||||||||||||    
T  18301661 gatacgatactgcaccgatatgtcgatacgggaaaatttcaaaaatcaagatacgatacg 18301602  T

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Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 37354492 - 37354561
Alignment:
Q  135 atacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||||| | |||||| ||||||||||||||||||||||||| |||| || |||| |||||||||||||||    
T  37354492 atacgaaatggatacgatactgcaccgatacgttgatacgggaaaactttaaaattcaagatacgatacg 37354561  T

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Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 203
Target Start/End: Complemental strand, 24586104 - 24586052
Alignment:
Q  151 atactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  24586104 atactgcaccgatatgctgatacggaaaaatttcaaaaatcgagatacgatac 24586052  T

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Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 204
Target Start/End: Complemental strand, 40536812 - 40536732
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    |||||||  ||||||||||| ||| | |||| |||| ||||||  |||||| |||||||||||||||||||||||||||||    
T  40536812 ccggatacaagatacgatacagattcgatacggcactgatacgccgatacgaaaaaatttcaaaaatcaagatacgatacg 40536732  T

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Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 5588638 - 5588559
Alignment:
Q  124 ccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatac 203  Q
    |||||||||||||||||||| ||||| ||||||||||||||  || |||  | |||||||| |||||||||||| |||||    
T  5588638 ccggatatgagatacgatacagatacgatactgcaccgatatattaatattggaaaatttccaaaatcaagatatgatac 5588559  T

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Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Complemental strand, 14824689 - 14824638
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||| |||||    
T  14824689 gatacagaaaaatttcaaaaatcaagatacgatacaactgagatacgttaat 14824638  T

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Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 40307864 - 40307915
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  40307864 gatacggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaat 40307915  T

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Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 2319870 - 2319811
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||| ||||||||  ||||||| |||||| |||||||||||||||||||||| ||||||    
T  2319870 gatacgatactgcattgatacgtcgatacgaaaaaatttcaaaaatcaagatatgatacg 2319811  T

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Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 31235734 - 31235785
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||| |||||    
T  31235734 gatacggaaaaatttcaaaaatcaagatatgatacggctgaaatacgttaat 31235785  T

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Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 33737437 - 33737507
Alignment:
Q  134 gatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||| |||||||| ||||  ||||||||||| ||||||| ||||||| |||| ||||||||| |||||    
T  33737437 gatacgacacggatacgatacgccaccgatacgtcgatacgggaaaattttaaaattcaagatactatacg 33737507  T

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Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 220
Target Start/End: Complemental strand, 4356458 - 4356368
Alignment:
Q  122 gcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||| |||||||||||||||||| ||||||||        | |||||| ||||| || |||||||||||||||||||| ||| ||||| |||||    
T  4356458 gcccggatacgagatacgatacggatacgatactgca--------tcgatacgaaaaaaatttaaaaatcaagatacgatacggctgggatacgttaat 4356368  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 20537442 - 20537385
Alignment:
Q  145 gatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgata 202  Q
    ||||| ||||||||| ||||||  ||||||| ||||||||||||||||| ||||||||    
T  20537442 gatacgatactgcactgatacgccgatacgggaaaatttcaaaaatcaaaatacgata 20537385  T

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Target: scaffold0640 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 7422 - 7514
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||| ||||||||| ||||    
T  7422 aagcccggatacgagatacgatacggatacgatactgcaccgata--------cggaaaaatttcaaaaatcaagatacgatacggctgagatacgttaa 7513  T

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Target: scaffold0060 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 29630 - 29747
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    ||||||||||| |||||||||||||||||| |||||| |||||||        |||||||||||||||||||||||||||||||| ||| ||||| ||||    
T  29630 aagcccggatacgagatacgatacggatacgatactgtaccgata--------cggaaaaatttcaaaaatcaagatacgatacggctgggatacgttaa 29721  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  29722 taaaaaaaattatataattaaatgta 29747  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 245
Target Start/End: Original strand, 43590 - 43707
Alignment:
Q  120 aagcccggatatgagatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaa 219  Q
    |||||| |||| |||||||||||||||||| ||||||||||        ||||| ||||| |||||||||||||||||||||||| ||| ||||| ||||    
T  43590 aagcccagatacgagatacgatacggatacgatactgcacc--------gatacagaaaattttcaaaaatcaagatacgatacggctgggatacgttaa 43681  T
Q  220 tnnnnnnnnttatataattaaatgta 245  Q
    |        |||||||||||||||||    
T  43682 taaaaaaaattatataattaaatgta 43707  T

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Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 220
Target Start/End: Original strand, 202331 - 202382
Alignment:
Q  169 gatacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||| |||||    
T  202331 gatatggaaaaatttcaaaaatcatgatacgatacggctgagatacgttaat 202382  T

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Target: scaffold0836 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 4978 - 5048
Alignment:
Q  134 gatacgatacggatacaatactgcaccgatacgttgatacggaaaaatttcaaaaatcaagatacgatacg 204  Q
    ||||||||| |||||| |||||||| |||||||| ||||| | ||||||| |||| |||||||||||||||    
T  4978 gatacgatagggatacgatactgcatcgatacgtcgatacaggaaaattttaaaattcaagatacgatacg 5048  T

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Target: scaffold0285 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 170 - 220
Target Start/End: Complemental strand, 13969 - 13919
Alignment:
Q  170 atacggaaaaatttcaaaaatcaagatacgatacgactgagatacattaat 220  Q
    ||||||||||||||||||||||||||||||||||||||  ||||| |||||    
T  13969 atacggaaaaatttcaaaaatcaagatacgatacgactaggatactttaat 13919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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