View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4250_low_8 (Length: 362)
Name: NF4250_low_8
Description: NF4250
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4250_low_8 |
 | |
|
| [»] chr4 (15 HSPs) |
| |
|
| [»] chr7 (9 HSPs) |
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|
| [»] chr3 (12 HSPs) |
| |
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| [»] chr5 (6 HSPs) |
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| [»] chr2 (7 HSPs) |
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| [»] chr1 (7 HSPs) |
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| [»] scaffold0516 (2 HSPs) |
| | |
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| [»] chr6 (8 HSPs) |
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| [»] scaffold0182 (2 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 301; Significance: 1e-169; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 21802782 - 21803143
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
21802782 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccaagtggctctcttttgttcttgattct |
21802881 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21802882 |
ttactagccattcattactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
21802981 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnn |
300 |
Q |
| |
|
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
21802982 |
tccattttattaatattgaggggttacgttttaaaattgttcatattcttaatcaataatcttacacacacaagtttactataaagctcctcattttttt |
21803081 |
T |
|
| Q |
301 |
ctaagcttattatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
21803082 |
ctaagcttattatgtgttgcttatgttatccttttcatctcttcttccattttattttttga |
21803143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 21633026 - 21632663
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |
|
|
| T |
21633026 |
ttctaagctacattttgcctatgtgtcaccttaccaatacccccctttctaactaatctctcatacttatgccaagtggcgctcttttgttcttgattct |
21632927 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgca-aaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattata |
199 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
21632926 |
ttactagccattccttactatctatctttcattttctatcagttgcaaaaaacatttcatttacttcacttcttgcaagttacacgatgaatgcattatg |
21632827 |
T |
|
| Q |
200 |
atccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctca-nnnnn |
298 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
21632826 |
atccattttattaatattgaggggttatgttttaaaattgttcatattcttaatcaatcttcttacacacacaagtttactataaagctcctcatttttt |
21632727 |
T |
|
| Q |
299 |
nnctaagcttattatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
21632726 |
ttctaagcttattatgtgttgcttatgttatccttttcatttcttcttccattttattttttga |
21632663 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 34738055 - 34737693
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
|||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
34738055 |
ttctaacctacattttgcatatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttatgccatgtggatctcttttgttcttgattct |
34737956 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||| | |||||||||||||||| | ||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
34737955 |
ttactagccattccgtacaatctatctttcattttccatcagttgcaaaaacactccatctacttcacttcatgcaagttacacaatgaatgcattataa |
34737856 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnn |
300 |
Q |
| |
|
||||||| ||||| | |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34737855 |
tccattttattaacaatgaggggttacattttaaaattattcatattcttgatcaatcctcttacacacacaagtttactataaagctcctcattttttt |
34737756 |
T |
|
| Q |
301 |
ctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34737755 |
ctaagcttatatatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
34737693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 53830765 - 53830396
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||||| |
|
|
| T |
53830765 |
ttctaagctacatttttcctatgtgtcaccttaccgatgcccccctttttaactaatctctcatacttatgccatgtggctatcttttgttcttgattct |
53830666 |
T |
|
| Q |
101 |
ttactagccattccttactatctatct----ttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcatt |
196 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||| | ||| |||||||||||| | |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
53830665 |
ttactagccgttccttactatctatctatctttcattttccatcggttgcaaaaacactctatttacttcacttcatgcaagttacacaatgaatgcatt |
53830566 |
T |
|
| Q |
197 |
ataatccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctca |
293 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
53830565 |
ataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctca |
53830466 |
T |
|
| Q |
294 |
nnnnnnnctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
53830465 |
tttttttctaagcttatatatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
53830396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 50 - 360
Target Start/End: Original strand, 5430644 - 5430958
Alignment:
| Q |
50 |
taactaatctctcatacttttgccaagtggctctcttttgttcttgattctttactagccattccttactatcta-tctttcatttcctatcagttgcaa |
148 |
Q |
| |
|
|||||||| | |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||| || |
|
|
| T |
5430644 |
taactaatttttcatacttatgccatgtggctctcttttgttcttgattctttactagccattccttactatctaatctttcatttcccatcaattggaa |
5430743 |
T |
|
| Q |
149 |
aaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatatt---gaggggttacattttaaaattgttcata |
245 |
Q |
| |
|
|||| | ||||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||| | ||||||||||||||||||||| |||||| |
|
|
| T |
5430744 |
aaactctccatttacttcacttcatggaagttacacaatgaatgtattataatccattttattaataatagtgaggggttacattttaaaattattcata |
5430843 |
T |
|
| Q |
246 |
ttcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnnctaagcttat-tatgtgttgcttatgttatccttttcaattcttc |
344 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||||||||| ||||||| ||||||| || ||| ||||||||||||||| ||| ||| |||||| |
|
|
| T |
5430844 |
ttcttagtcaatcatcttacacacacaagtttactataaaactcctca-ttttttctaagctcatatatatgttgcttatgttattcttctcatttcttc |
5430942 |
T |
|
| Q |
345 |
ttccatttcatttttt |
360 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
5430943 |
ttccatttcatttttt |
5430958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 115 - 362
Target Start/End: Complemental strand, 2505143 - 2504892
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
2505143 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
2505044 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
2505043 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
2504944 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
2504943 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
2504892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 63 - 360
Target Start/End: Complemental strand, 2500838 - 2500540
Alignment:
| Q |
63 |
atacttttgccaagtggctctcttttgttcttgattctttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcattta |
162 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||| ||| |||||||||| | |||||| |
|
|
| T |
2500838 |
atacttatgccatgtggctctcttttgttcttgattccctactaatcattccttactatttatctttcatttcccatccgttgcaaaaatacaccattta |
2500739 |
T |
|
| Q |
163 |
cttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctct |
262 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||||||| |||||||||| | ||||||||||||||||| || ||||||| ||||||||||| |
|
|
| T |
2500738 |
cttcacttcatgcaagttgcacaatgaatgcattataatccattttattaatattgtgcggttacattttaaaattatttgtattcttgatcaatcctct |
2500639 |
T |
|
| Q |
263 |
tacacacacaagtttactataaagctcctcannnnnnnctaagctta-ttatgtgttgcttatgttatccttttcaattcttcttccatttcatttttt |
360 |
Q |
| |
|
||||||||||||||||||||||| || |||| ||||||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
2500638 |
tacacacacaagtttactataaatctactcatttttttctaagcttacatatatgttgcttatattatccttttcatttcttcttccatttcatttttt |
2500540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 118 - 362
Target Start/End: Original strand, 46092306 - 46092554
Alignment:
| Q |
118 |
ctatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatatt |
217 |
Q |
| |
|
||||||||||||||||| | ||| ||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
46092306 |
ctatctatctttcattttccatcggttacaaaaacttgccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatatt |
46092405 |
T |
|
| Q |
218 |
gaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat-tat |
313 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |
|
|
| T |
46092406 |
gaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttatatat |
46092505 |
T |
|
| Q |
314 |
gtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46092506 |
atgttgcttatgttatccttttcatttcttcttccatttcattttttga |
46092554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 118 - 362
Target Start/End: Original strand, 46134831 - 46135079
Alignment:
| Q |
118 |
ctatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatatt |
217 |
Q |
| |
|
||||||||||||||||| | ||| ||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
46134831 |
ctatctatctttcattttccatcggttacaaaaacttgccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaatatt |
46134930 |
T |
|
| Q |
218 |
gaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat-tat |
313 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |
|
|
| T |
46134931 |
gaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttatatat |
46135030 |
T |
|
| Q |
314 |
gtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46135031 |
atgttgcttatgttatccttttcatttcttcttccatttcattttttga |
46135079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 83 - 293
Target Start/End: Original strand, 20036251 - 20036461
Alignment:
| Q |
83 |
tcttttgttcttgattctttactagccattccttactatctatctttcatttcctatcagttgcaaaaa-catttcatttacttcacttcttgcaagtta |
181 |
Q |
| |
|
|||||||||||| |||||||||||| ||||| |||||||||||||||||||||| ||||| || ||||| || |||| |||||||||||| |||||||| |
|
|
| T |
20036251 |
tcttttgttctt-attctttactagtcattcattactatctatctttcatttcccatcagatgtaaaaaacacttcagttacttcacttcatgcaagttg |
20036349 |
T |
|
| Q |
182 |
cacaatgaatgcattataatccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttacta |
281 |
Q |
| |
|
|| ||||||||||||||||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
20036350 |
cataatgaatgcattataattcattttattaatattgagcagttacattttaaaattaatcatattcttaatcaatcctcttacactcacaagtttacta |
20036449 |
T |
|
| Q |
282 |
taaagctcctca |
293 |
Q |
| |
|
||||| |||||| |
|
|
| T |
20036450 |
taaagttcctca |
20036461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27256586 - 27256640
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaacta |
55 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
27256586 |
ttctaacctacatttttcctatgtgtcaccttaccaatgcccccctttctaacta |
27256640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 43943462 - 43943520
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataat |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
43943462 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
43943520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 51868314 - 51868360
Alignment:
| Q |
9 |
tacatttcgcctatgtgtcaccttaccaatgcctccctttctaacta |
55 |
Q |
| |
|
||||||| || |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
51868314 |
tacattttgcttatgtgtcaccttaccaatgcccccctttctaacta |
51868360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 26382353 - 26382438
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgc-ctccctttctaactaatctctcatacttttgccaagtggctctct |
85 |
Q |
| |
|
||||||||||||||| | || |||||||| ||||| || |||||||| |||| |||||||||||||| ||||| |||||||||| |
|
|
| T |
26382353 |
ttctaagctacattttccttacatgtcacctcaccaaagctctccctttgtaaccaatctctcatacttatgccatgtggctctct |
26382438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 293
Target Start/End: Original strand, 43943563 - 43943600
Alignment:
| Q |
256 |
atcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
43943563 |
atcctcttacacacacaagtttactacaaagctcctca |
43943600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 295; Significance: 1e-166; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 295; E-Value: 1e-166
Query Start/End: Original strand, 1 - 360
Target Start/End: Original strand, 10186240 - 10186599
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
10186240 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcccccctttctaactaatatctcttacttatgccaagtgactctcttttgttcttgattct |
10186339 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
10186340 |
ttactagtcattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacctcacttcttgcaagttacacaatgaatgcattataa |
10186439 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnn |
300 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10186440 |
tccattttattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctcattttttt |
10186539 |
T |
|
| Q |
301 |
ctaagcttattatgtgttgcttatgttatccttttcaattcttcttccatttcatttttt |
360 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
10186540 |
ccaagcttattatgtgttgcttatgttatccttttcatttcctcttccatttcatttttt |
10186599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 4138203 - 4138565
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
4138203 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccaagtggctctcttttgttcttgattct |
4138302 |
T |
|
| Q |
101 |
ttactagccattccttactatctatct-------ttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgc |
193 |
Q |
| |
|
||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4138303 |
ttactagccattctctactatctatctttcatctttcatttcctatccgttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgc |
4138402 |
T |
|
| Q |
194 |
attataatccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
||||||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |
|
|
| T |
4138403 |
attataatctattttattaatattgaggggttacgttttaaaattgttcatattcttaatcaagactcttacacacacaagtttac------gctcctca |
4138496 |
T |
|
| Q |
294 |
nnnnnnnctaagcttattatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
4138497 |
tttttttctaagcttattatgtgttgcttatgttatccttttcatttcttcttccatttcattttttga |
4138565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 8150747 - 8150455
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| ||| ||||||||||||||||| |
|
|
| T |
8150747 |
ttctaagctacattttgcatatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccatgtgactcacttttgttcttgattct |
8150648 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||||||| |
|
|
| T |
8150647 |
ttactagccatttcttactatctatctttcatttcccatcagttgcaaaaacactccatttacttcactttatgcgagttacacaatgaatgcattataa |
8150548 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
|| |||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8150547 |
tcaattttattaatattgaggggttacattttaaaattattcatattcttaatcagtcctcttacacacacaagtttactataaagctcctca |
8150455 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 50 - 360
Target Start/End: Original strand, 20171892 - 20172201
Alignment:
| Q |
50 |
taactaatctctcatacttttgccaagtggctctcttttgttcttgattctttactagccattccttactatcta-tctttcatttcctatcagttgcaa |
148 |
Q |
| |
|
|||||||| | | |||||| || || |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||| ||| || |
|
|
| T |
20171892 |
taactaattttttatacttatgtcatgtggctctcttttgttcttgattctttactagtcatttcttactatctaatctttcatttcccatcaattggaa |
20171991 |
T |
|
| Q |
149 |
aaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatattgaggggttacattttaaaattgttcatattc |
248 |
Q |
| |
|
|||| | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||| |
|
|
| T |
20171992 |
aaactctctatttacttcacttcatggaagttacacaatgaatgtattataatccattttattaatagtgaggggtttcattttaaaattattcatattc |
20172091 |
T |
|
| Q |
249 |
ttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnnctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttc |
347 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
20172092 |
ttagtcaatcatcttacacacacaagtttactataaagctcctca---ttttctaagctcatatatatgttgcttatgttatccttctcatttcttcttc |
20172188 |
T |
|
| Q |
348 |
catttcatttttt |
360 |
Q |
| |
|
||||||||||||| |
|
|
| T |
20172189 |
catttcatttttt |
20172201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 11428375 - 11428184
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttc-taactaatctctcatacttttgccaagtggctctcttttgttcttgattc |
99 |
Q |
| |
|
||||||||||||||| || |||||||||||| || ||| ||||||| |||||||| | |||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
11428375 |
ttctaagctacattttgcttatgtgtcacctcactaatatttcccttttgtaactaatttttcatacttatgccttgtggctctcttttgttcttgattc |
11428276 |
T |
|
| Q |
100 |
tttactagccattccttactatct-atctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaa |
190 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| | |||| ||| |||||| | ||||||||||||||| || ||||||||||||||| |
|
|
| T |
11428275 |
tttactagccattccttactatctaatctttcattttccatcaattggaaaaactatccatttacttcacttcatggaagttacacaatgaa |
11428184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 217 - 360
Target Start/End: Complemental strand, 11428182 - 11428039
Alignment:
| Q |
217 |
tgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnnctaagcttat-tatgt |
315 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||||||| ||||||||||||| ||||||| || ||| | |
|
|
| T |
11428182 |
tgaggggttacattttaaaattattcatattcttagtcaatcatcttacacacagaagtttacgataaagctcctca-ttttttctaagctcatatatat |
11428084 |
T |
|
| Q |
316 |
gttgcttatgttatccttttcaattcttcttccatttcatttttt |
360 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
11428083 |
gttgcttatgttatccttctcatttcttcttccatttcatttttt |
11428039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 919018 - 918949
Alignment:
| Q |
194 |
attataatccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctctt |
263 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
919018 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctctt |
918949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 301 - 362
Target Start/End: Complemental strand, 918939 - 918877
Alignment:
| Q |
301 |
ctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
|||||||||| ||| | |||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
918939 |
ctaagcttatatatatattgcatatgttatccttttcatttcttcttccatttcattttttga |
918877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14597543 - 14597489
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaacta |
55 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||| || ||||||||||||| |
|
|
| T |
14597543 |
ttctaagctacattttgcctatatgtcaccttaccaattcccccctttctaacta |
14597489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 47234077 - 47233713
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
|||||| ||| |||| |||||||||||| ||||||||||| |||||||||||||||||||||||||| || || |||||| |||||||||||||||||| |
|
|
| T |
47234077 |
ttctaaactatatttttcctatgtgtcactttaccaatgcc-ccctttctaactaatctctcatacttatgtcatgtggctatcttttgttcttgattct |
47233979 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
47233978 |
ttactagtcattccttactatctatctttcattttccatcagttgcaaaaacacttcatttacttcacttcatgcaagttacacaatgaatgcattataa |
47233879 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnn |
297 |
Q |
| |
|
||||||| ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
47233878 |
tccattttattaatattaaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttt |
47233779 |
T |
|
| Q |
298 |
nnnctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
47233778 |
tttataagcttatatatatgttgcttatattatccttttcatttcttcttccatttcattttttga |
47233713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 115 - 362
Target Start/End: Complemental strand, 5768206 - 5767955
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
5768206 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatcaattttattaat |
5768107 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
5768106 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttata |
5768007 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5768006 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
5767955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 115 - 362
Target Start/End: Complemental strand, 25419717 - 25419466
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
25419717 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
25419618 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
25419617 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
25419518 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
25419517 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
25419466 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 50 - 360
Target Start/End: Original strand, 44393602 - 44393911
Alignment:
| Q |
50 |
taactaatctctcatacttttgccaagtggctctcttttgttcttgattctttactagccattccttactatcta-tctttcatttcctatcagttgcaa |
148 |
Q |
| |
|
|||||||| | | |||||| || || |||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||| |||| ||| || |
|
|
| T |
44393602 |
taactaattttttatacttatgtcatgtggctctcttttgttcttgattctttactagtcatttcttactatctaatctttcatttcccatcaattggaa |
44393701 |
T |
|
| Q |
149 |
aaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatattgaggggttacattttaaaattgttcatattc |
248 |
Q |
| |
|
|||| | |||||||||||||| || ||||||||||||||||| |||||||||||||| ||||||| ||||||||| |||||||||||| ||||||||| |
|
|
| T |
44393702 |
aaactctctatttacttcacttcatggaagttacacaatgaatgtattataatccattttattaatagtgaggggtttcattttaaaattattcatattc |
44393801 |
T |
|
| Q |
249 |
ttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnnctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttc |
347 |
Q |
| |
|
||| |||||| |||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||||| ||| ||||||||| |
|
|
| T |
44393802 |
ttagtcaatcatcttacacacacaagtttactataaagctcctca---ttttctaagctcatatatatgttgcttatgttatccttctcatttcttcttc |
44393898 |
T |
|
| Q |
348 |
catttcatttttt |
360 |
Q |
| |
|
||||||||||||| |
|
|
| T |
44393899 |
catttcatttttt |
44393911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 115 - 278
Target Start/End: Complemental strand, 39067012 - 39066849
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
39067012 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
39066913 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagttta |
278 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
39066912 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacatacaagttta |
39066849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39063987 - 39063933
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaacta |
55 |
Q |
| |
|
|||||| |||||||| || ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
39063987 |
ttctaacctacattttgcttatgtgtcatcttaccaatgcctccctttctaacta |
39063933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 47932974 - 47932924
Alignment:
| Q |
243 |
atattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
||||| ||| || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
47932974 |
atatttttattctatcctcttacacacacaagtttactacaaagctcctca |
47932924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 47933033 - 47932975
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataat |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
47933033 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
47932975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 17026583 - 17026639
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaat |
57 |
Q |
| |
|
|||||||||||| || || |||||||||||| |||||| || |||| |||||||||| |
|
|
| T |
17026583 |
ttctaagctacactttgcttatgtgtcacctcaccaattcccccctctctaactaat |
17026639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 231; Significance: 1e-127; HSPs: 12)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 35870229 - 35870594
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||| |||||| ||||||||||| |
|
|
| T |
35870229 |
ttctaagctacattttttctatgtgtcaccttaccaatgcccccctttctaactaatctctcatacttatgccatgtggctatcttttcttcttgattct |
35870328 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | ||||||||| ||||| | ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
35870329 |
ttactagtcattccttactatctatctttcattttccatcagttgcgaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataa |
35870428 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnn |
297 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
35870429 |
tccattttattaatattgagaggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaaggtcctcatttt |
35870528 |
T |
|
| Q |
298 |
nnnctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
|||| ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
35870529 |
tttctaaacttatatatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
35870594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 362
Target Start/End: Original strand, 48266153 - 48266515
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||| ||||| | |||||||||||||| | ||||| |||||||||||||||||| |||||| || || |||||| |||||| ||||||||||| |
|
|
| T |
48266153 |
ttctaagcttcatttttcttatgtgtcaccttatctatgcccccctttctaactaatctc--atacttatgtcatgtggctatcttttcttcttgattct |
48266250 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
||||||| |||||||||||||||||||||||||| | ||||||||||||||| | ||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
48266251 |
ttactagtcattccttactatctatctttcattttccatcagttgcaaaaactctccatttactt-acttcatgcaagttacacaatgaatgcattataa |
48266349 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnn |
297 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
48266350 |
tccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttt |
48266449 |
T |
|
| Q |
298 |
nnnctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
|||||||||| ||| |||||||||||||||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
48266450 |
tttctaagcttatatatatgttgcttatgttatcctcttcatttcttcttccattttattttttga |
48266515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 115 - 362
Target Start/End: Original strand, 52349726 - 52349977
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
52349726 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
52349825 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
52349826 |
attgaggggttacattttaaaattatttatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
52349925 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
52349926 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
52349977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 250
Target Start/End: Original strand, 26215169 - 26215420
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttc-taactaatctctcatacttttgccaagtggctctcttttgttcttgattc |
99 |
Q |
| |
|
|||||| |||||||| | ||||||| || | ||||||| ||||||| ||||||||||||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
26215169 |
ttctaaactacattttacttatgtgttacttcaccaatgtttcccttttgtaactaatctctcatacttatgccatgtggctctcttttgttcttgattc |
26215268 |
T |
|
| Q |
100 |
tttactagccattccttactatcta-tctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattat |
198 |
Q |
| |
|
||| ||||||||||||||||||||| |||||||||| | |||| ||| |||||| | ||||||||||||||| || ||||||||||||||||| |||| |
|
|
| T |
26215269 |
tttgctagccattccttactatctaatctttcattttccatcaattggaaaaactctccatttacttcacttcatggaagttacacaatgaatgtgttat |
26215368 |
T |
|
| Q |
199 |
aatccatttgattaatattgaggggttacattttaaaattgttcatattctt |
250 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||| ||||||||||| |
|
|
| T |
26215369 |
aatccattttattaatagcgaggggttacattttaaaattattcatattctt |
26215420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 233 - 360
Target Start/End: Original strand, 26215432 - 26215559
Alignment:
| Q |
233 |
aaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnnctaagcttat-tatgtgttgcttatgttatcc |
331 |
Q |
| |
|
|||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| || ||| ||||||||||||||||| |
|
|
| T |
26215432 |
aaaattattcatattcttagtcaatcatcttacacacacaagtttactataaagctcctca-ttttttctaagctcatatatatgttgcttatgttatcc |
26215530 |
T |
|
| Q |
332 |
ttttcaattcttcttccatttcatttttt |
360 |
Q |
| |
|
|| ||| |||||||||||||||||||||| |
|
|
| T |
26215531 |
ttctcatttcttcttccatttcatttttt |
26215559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 5884481 - 5884423
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataat |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
5884481 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
5884423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 54945776 - 54945726
Alignment:
| Q |
243 |
atattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
||||| ||| || |||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
54945776 |
atatttttattctatcctcttacacacacaagtttactacaaagctcctca |
54945726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 54945835 - 54945777
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataat |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
54945835 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
54945777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10176759 - 10176709
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaa |
52 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
10176759 |
ttctaaactacatttttcctatgtgtcaccttaccaatgcc-ccctttctaa |
10176709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 5884422 - 5884372
Alignment:
| Q |
243 |
atattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
||||| ||| || |||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
5884422 |
atatttttattctatcctcttacacacacaagtttactacaaagcttctca |
5884372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33519260 - 33519206
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaacta |
55 |
Q |
| |
|
|||||| |||||| | || ||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
33519260 |
ttctaacctacatattgcttatgtgtcatcttactaatgcctccctttctaacta |
33519206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 43267968 - 43267912
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaat |
57 |
Q |
| |
|
||||||||||||||| |||||| |||||| ||||||||| |||| |||||||||| |
|
|
| T |
43267968 |
ttctaagctacattttttctatgtatcacctcaccaatgcccccctctctaactaat |
43267912 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 230; Significance: 1e-127; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 362
Target Start/End: Complemental strand, 21605322 - 21604960
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||| || || |||||| |||||||||||||||||| |
|
|
| T |
21605322 |
ttctaagctacatttttcctatgtgtcaccttaccaatacc-ccctttctaactaatctctcatacttatgtcatgtggctatcttttgttcttgattct |
21605224 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
||| ||| |||||||||||||||||||||||||| | || | |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
21605223 |
ttattagtcattccttactatctatctttcattttccattggctgcaaaaacacttcatttacttcacttcatgcaagttacacaatgaatgcattataa |
21605124 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnn |
297 |
Q |
| |
|
||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21605123 |
tccattttattaatattgaggggttaaattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttt |
21605024 |
T |
|
| Q |
298 |
nnnctaagcttattatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21605023 |
tttctaagctta-tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
21604960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 1 - 293
Target Start/End: Complemental strand, 37302244 - 37301952
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattct |
100 |
Q |
| |
|
|||||| |||||||| || |||||||||||||||||||| || |||||||||||||||||| |||||| ||||| |||| |||||||||||||||||||| |
|
|
| T |
37302244 |
ttctaacctacattttgcatatgtgtcaccttaccaatgacttcctttctaactaatctcttatacttatgccatgtggatctcttttgttcttgattct |
37302145 |
T |
|
| Q |
101 |
ttactagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataa |
200 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||||| |||| ||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
37302144 |
ttactagccattccgtacaatctatctttcatttcccatcatttgcaaaaacactccatttacttcacttcatgcaagttacacaatgaatgcattataa |
37302045 |
T |
|
| Q |
201 |
tccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
||||||| ||||||| || |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
37302044 |
tccattttattaataatggagggttacattttaaaattattcatattcttaatcaatccacttacacacacaagtttactataaaactcctca |
37301952 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 115 - 362
Target Start/End: Original strand, 36991043 - 36991294
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
36991043 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatctattttattaat |
36991142 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
36991143 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttttctaagcttata |
36991242 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
36991243 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
36991294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 37301845 - 37301798
Alignment:
| Q |
315 |
tgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
37301845 |
tgttgcttatgttatccttttcatttcttcttccatttcattttttga |
37301798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10180452 - 10180503
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaa |
52 |
Q |
| |
|
|||||| |||||||| || |||||||||||| |||||||||||||||||||| |
|
|
| T |
10180452 |
ttctaacctacattttgcttatgtgtcacctcaccaatgcctccctttctaa |
10180503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 11386784 - 11386869
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgc-ctccctttctaactaatctctcatacttttgccaagtggctctct |
85 |
Q |
| |
|
||||||||||||||| | || |||||||| ||||| | |||||||| |||| |||||||||||||| ||||| |||||||||| |
|
|
| T |
11386784 |
ttctaagctacattttccttacatgtcacctcaccaaaactctccctttgtaaccaatctctcatacttatgccatgtggctctct |
11386869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 208; Significance: 1e-114; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 4 - 362
Target Start/End: Complemental strand, 41646959 - 41646598
Alignment:
| Q |
4 |
taagctacatttcgcctatgtgtcaccttaccaatg-cctccctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattcttt |
102 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| || |||||| ||||||||||||||||||| ||||| |||||| |||||||||||||||||||| |
|
|
| T |
41646959 |
taagctacatttttcctatgtgtcaccttaccaatgtcccccctttttaactaatctctcatacttatgccatgtggctatcttttgttcttgattcttt |
41646860 |
T |
|
| Q |
103 |
actagccattccttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatc |
202 |
Q |
| |
|
||||||||||||||||| |||||||||||| | ||| |||||||||||| | ||||||||||| ||| |||||||||||||||||||| ||| ||||| |
|
|
| T |
41646859 |
actagccattccttact---tatctttcattttccatcggttgcaaaaacactccatttacttcatttcatgcaagttacacaatgaatgtattttaatc |
41646763 |
T |
|
| Q |
203 |
catttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctca-nnnnn |
298 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
41646762 |
cattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcatttttt |
41646663 |
T |
|
| Q |
299 |
nnctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
|||||||||| ||| ||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
41646662 |
ttctaagcttatatatatgttgcttatgttgtccttttcatttcttcttccatttcattttttga |
41646598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 115 - 362
Target Start/End: Complemental strand, 7574233 - 7573982
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
7574233 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
7574134 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
7574133 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
7574034 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
7574033 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
7573982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 115 - 362
Target Start/End: Complemental strand, 16668828 - 16668577
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
16668828 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacataatgaatgcattataatccattttattaat |
16668729 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
16668728 |
attgaggggttacattttaaaattattcatattcttgatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
16668629 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
16668628 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
16668577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 43564238 - 43564304
Alignment:
| Q |
194 |
attataatccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcct |
260 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
43564238 |
attataatccattttattaatattgaggggttacattttaaaattattcatattcttaatcaatcct |
43564304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 29455448 - 29455517
Alignment:
| Q |
194 |
attataatccatttgattaatattgaggggttacattttaaaattgttcatattcttaatcaatcctctt |
263 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
29455448 |
attataatccattttattaatatcgaggggttacattttaaaattattcatattcttaattaatcctctt |
29455517 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 43564317 - 43564376
Alignment:
| Q |
301 |
ctaagcttat-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttt |
359 |
Q |
| |
|
|||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
43564317 |
ctaagcttatatatatgttgcttatgttatccttttcatttcttcttccatttcattttt |
43564376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 37904131 - 37904075
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaat |
57 |
Q |
| |
|
||||||||||||||| |||||||||||||| ||||||||| |||| |||||||||| |
|
|
| T |
37904131 |
ttctaagctacatttttcctatgtgtcacctcaccaatgcccccctctctaactaat |
37904075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 191; Significance: 1e-103; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 45 - 362
Target Start/End: Complemental strand, 22912740 - 22912422
Alignment:
| Q |
45 |
ctttctaactaatctctcatacttttgccaagtggctctcttttgttcttgattctttactagccattccttactatctatctttcatttcctatca-gt |
143 |
Q |
| |
|
|||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||| || |
|
|
| T |
22912740 |
ctttctaactaatctctcatacttatgccatgtggctctcttttgttcttgattctttactagccattccttattatttatctttcatttcccatcaggt |
22912641 |
T |
|
| Q |
144 |
tgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatattgaggggttacattttaaaattgttca |
243 |
Q |
| |
|
|||| ||||| | |||||||||||||||||||| |||||| |||||||||||||||| |||||| ||||||| ||||| |||||||||||||||| |||| |
|
|
| T |
22912640 |
tgcagaaacactccatttacttcacttcttgcatgttacaaaatgaatgcattataaaccattttattaata-tgaggagttacattttaaaattattca |
22912542 |
T |
|
| Q |
244 |
tattcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnnctaagcttat-tatgtgttgcttatgttatccttttcaattct |
342 |
Q |
| |
|
|||||||||||||||||||||||||||| | |||||||| |||||||||| |||||||||| ||| ||||||||||||||| ||||||| |||| |
|
|
| T |
22912541 |
tattcttaatcaatcctcttacacacacgaatttactattaagctcctcatttttttctaagcttatatatatgttgcttatgttattcttttcatttct |
22912442 |
T |
|
| Q |
343 |
tcttccatttcattttttga |
362 |
Q |
| |
|
|||||||||| ||||||||| |
|
|
| T |
22912441 |
tcttccattttattttttga |
22912422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 115 - 362
Target Start/End: Original strand, 13786229 - 13786480
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13786229 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
13786328 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
13786329 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
13786428 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
13786429 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
13786480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 115 - 362
Target Start/End: Complemental strand, 25807914 - 25807662
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | |||| || ||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
25807914 |
ttactatctatctttcattttccatcaattacaaaaactttccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
25807815 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctca-nnnnnnnctaagcttat |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |
|
|
| T |
25807814 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttattactataaagctcctcattttttttctaagcttat |
25807715 |
T |
|
| Q |
311 |
-tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| |||| |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
25807714 |
atatatgtttcttatgttatccttttcatttcttcttccatttcattttttga |
25807662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 50 - 293
Target Start/End: Complemental strand, 23726231 - 23725991
Alignment:
| Q |
50 |
taactaatctctcatacttttgccaagtggctctcttttgttcttgattctttactagccattccttactatctatctttcatttcctatcagttgcaaa |
149 |
Q |
| |
|
||||||||||||||||||| || | ||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||| ||| |||||||| |
|
|
| T |
23726231 |
taactaatctctcatacttatgttatatggctctcttttgttcttgattctttactggtcattctttactatctatctttcatttttcatctgttgcaaa |
23726132 |
T |
|
| Q |
150 |
aacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatattgaggggttacattttaaaattgttcatattct |
249 |
Q |
| |
|
|||| ||||||||||||| ||| |||||||| ||||||||||| |||||||||||||| ||||||||| | ||||||||||| ||||| |||||||||| |
|
|
| T |
23726131 |
aacacttcatttacttcatttcatgcaagttgcacaatgaatgaattataatccattttattaatattaaacggttacatttt-aaattattcatattct |
23726033 |
T |
|
| Q |
250 |
taatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
23726032 |
taatcaatcctctt--gcacacaagtttactataaagctcctca |
23725991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 360
Target Start/End: Original strand, 39623658 - 39623701
Alignment:
| Q |
317 |
ttgcttatgttatccttttcaattcttcttccatttcatttttt |
360 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
39623658 |
ttgcttattttatccttttcatttcttcttccatttcatttttt |
39623701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 23725979 - 23725939
Alignment:
| Q |
320 |
cttatgttatccttttcaattcttcttccatttcatttttt |
360 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||| |
|
|
| T |
23725979 |
cttatgtcatccttttcatttcttcttccatttcatttttt |
23725939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 23727892 - 23727848
Alignment:
| Q |
44 |
cctttctaactaatctctcatacttttgccaagtggctctctttt |
88 |
Q |
| |
|
||||| |||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
23727892 |
cctttttaaccaatctctcatacttatgccaagtggctctctttt |
23727848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0516 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0516
Description:
Target: scaffold0516; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 3151 - 3425
Alignment:
| Q |
20 |
tatgtgtcaccttaccaatgcctccctttc-taactaatctctcatacttttgccaagtggctctcttttgttcttgattctttactagccattccttac |
118 |
Q |
| |
|
|||||||||| | ||||| | |||||||| ||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
3151 |
tatgtgtcacttcaccaacgtctcccttttgtaactaatctctcatacttatgtcatgtggctctcttttgttcttgattctttactagccattctttac |
3250 |
T |
|
| Q |
119 |
tatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaatattg |
218 |
Q |
| |
|
||| |||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||| |||||||| || |||||||||||||| ||||||||| |
|
|
| T |
3251 |
tatttatctttcatttcccatcagttgcaaaaacacttcatttacttcacttcatgcaagttgcacaatgattgaattataatccattttattaatatta |
3350 |
T |
|
| Q |
219 |
aggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3351 |
agcggttacattttaaaattattcatattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
3425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0516; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 315 - 362
Target Start/End: Original strand, 3432 - 3479
Alignment:
| Q |
315 |
tgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
|||||||||||| |||||||| | |||||||||||||||||||||||| |
|
|
| T |
3432 |
tgttgcttatgtcatccttttaatttcttcttccatttcattttttga |
3479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 161; Significance: 8e-86; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 115 - 362
Target Start/End: Complemental strand, 13433595 - 13433344
Alignment:
| Q |
115 |
ttactatctatctttcatttcctatcagttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataatccatttgattaat |
214 |
Q |
| |
|
|||||||||||||||||||| | ||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13433595 |
ttactatctatctttcattttccatcagttacaaaaactctccatttacttcacttcatgcaagttacacaatgaatgcattataatccattttattaat |
13433496 |
T |
|
| Q |
215 |
attgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagt---ttactataaagctcctcannnnnnnctaagcttat- |
310 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||| |
|
|
| T |
13433495 |
attgaggggttacattttaaaattattcatattcttaatcaatcctcttacacacacaaatttattactataaagctcctcatttttttctaagcttata |
13433396 |
T |
|
| Q |
311 |
tatgtgttgcttatgttatccttttcaattcttcttccatttcattttttga |
362 |
Q |
| |
|
||| ||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
13433395 |
tatatgttgcttatgttatccttttcatttcttcttccatttcattttttga |
13433344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 211 - 353
Target Start/End: Complemental strand, 16712155 - 16712015
Alignment:
| Q |
211 |
taatattgaggggttacattttaaaattgttcatattcttaatcaatcctcttacacacacaagtttactataaagctcctcannnnnnnctaagcttat |
310 |
Q |
| |
|
||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||| || ||||| ||||||| ||||||| || |
|
|
| T |
16712155 |
taatagtgaggggttacattttaaaattattcatattcttaatcaatcatcttacacacac--gttcaccataaaactcctcatttttttctaagctcat |
16712058 |
T |
|
| Q |
311 |
-tatgtgttgcttatgttatccttttcaattcttcttccatttc |
353 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
16712057 |
atatatgttgcttatgttatccttttc-attcttcttccatttc |
16712015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18877377 - 18877431
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaacta |
55 |
Q |
| |
|
|||||| |||||||| || || ||||||||||||||||||||||||||||||||| |
|
|
| T |
18877377 |
ttctaacctacattttgcttaggtgtcaccttaccaatgcctccctttctaacta |
18877431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 317 - 360
Target Start/End: Original strand, 18882829 - 18882872
Alignment:
| Q |
317 |
ttgcttatgttatccttttcaattcttcttccatttcatttttt |
360 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
18882829 |
ttgcttattttatccttttcatttcttcttccatttcatttttt |
18882872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 143 - 201
Target Start/End: Original strand, 16857232 - 16857290
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataat |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
16857232 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtacaatgaatgcattataat |
16857290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 26615380 - 26615320
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaa--gttacacaatgaatgcattataat |
201 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
26615380 |
ttgcaaaaacacttcatttacttcacttcatgcaattgttgtacaatgaatgcattataat |
26615320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 26721308 - 26721248
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaa--gttacacaatgaatgcattataat |
201 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||| |
|
|
| T |
26721308 |
ttgcaaaaacacttcatttacttcacttcatgcaattgttgtacaatgaatgcattataat |
26721248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 18880851 - 18880907
Alignment:
| Q |
1 |
ttctaagctacatttcgcctatgtgtcaccttaccaatgcctccctttctaactaat |
57 |
Q |
| |
|
|||||||||||| || || |||||||||||| |||||| || |||| |||||||||| |
|
|
| T |
18880851 |
ttctaagctacactttgcttatgtgtcacctcaccaattcccccctctctaactaat |
18880907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 10170 - 10120
Alignment:
| Q |
243 |
atattcttaatcaatcctcttacacacacaagtttactataaagctcctca |
293 |
Q |
| |
|
||||| ||| || |||||||||||||||||||||||||| |||||| |||| |
|
|
| T |
10170 |
atatttttattctatcctcttacacacacaagtttactacaaagcttctca |
10120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 143 - 201
Target Start/End: Complemental strand, 10229 - 10171
Alignment:
| Q |
143 |
ttgcaaaaacatttcatttacttcacttcttgcaagttacacaatgaatgcattataat |
201 |
Q |
| |
|
|||||||| || | ||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
10229 |
ttgcaaaagcactgcatttacttcacttcatgcaagttgtgcaatgaatgcattataat |
10171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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