View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4251_low_11 (Length: 241)
Name: NF4251_low_11
Description: NF4251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4251_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 1610047 - 1609827
Alignment:
| Q |
1 |
acaattttcggccactttcactttccagacaaaatttctcacctttggctgcactgcaagtctccaaattaccatccaatcgccctccacctgcagttac |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
1610047 |
acaattttcggccactttcactttccagacaaaatttctcacctttggctgcactgcaagtctccaaattaccatccaatcaccctccacctgcagttac |
1609948 |
T |
|
| Q |
101 |
gtattgtctgaaagttctgtctactaaccacaactatatgagaagaaaattacactaaattcagtatataatgtcccaccataactattgcaaaaactcc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
1609947 |
gtattgtctgaaagttctgtctactaaccacaactatatgagaagaaaattacactaaattcaatatataatgtcccaccataactattgcaaaaactcc |
1609848 |
T |
|
| Q |
201 |
ataataaatattccaacataa |
221 |
Q |
| |
|
|||| |||||||||||||||| |
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|
| T |
1609847 |
ataacaaatattccaacataa |
1609827 |
T |
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