View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4251_low_14 (Length: 215)
Name: NF4251_low_14
Description: NF4251
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4251_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 32268471 - 32268285
Alignment:
| Q |
18 |
aaactcatctatcaaactctcatccaacatattctctaatgtttcatcttcttcttcaccatcatcaattttaaatttaacatcacctgaattattaata |
117 |
Q |
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| T |
32268471 |
aaactcatctatcaaactctcatccaacatattctctaatgtttcatcttcttcttcaccatcatcaattttaaatttaacatcacctgaattattaata |
32268372 |
T |
|
| Q |
118 |
ttgttttcattgttatgaacgatgaaacaaaataatgtgacactcgtatttggacggtccaacattctaatacccaatgcctatgct |
204 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32268371 |
ttgttttcattgttatgaacgatgaaacaaaataatgtgacactcgtatttggacggtccaacattctaatacccaatgccaatgct |
32268285 |
T |
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