View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4253_low_8 (Length: 221)
Name: NF4253_low_8
Description: NF4253
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4253_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 15630978 - 15631160
Alignment:
| Q |
1 |
aaggaacgcttgaccaataatacatgctttgcatctcgcaaagtaaagtatcgctcattttggtgaatgccatagattgcacacgtaactagtttgataa |
100 |
Q |
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| T |
15630978 |
aaggaacgcttgaccaataatacatgctttgcatctcgcagagtaaagtatcgctcattttggtgaatgccatagattgcacacgtaactaatttgataa |
15631077 |
T |
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| Q |
101 |
tatcaagtgctcgttagggtattcatctccaagccaccaaggacttttcccacccttgatcacgac-ttcgcatctccctcat |
182 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
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| T |
15631078 |
tatcaagtgctcgttagggtattcatctccaagccaccaaggacttttcccacccttgatcacgactttggcatctccctcat |
15631160 |
T |
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