View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4254-Insertion-3 (Length: 234)
Name: NF4254-Insertion-3
Description: NF4254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4254-Insertion-3 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 6 - 234
Target Start/End: Complemental strand, 50264893 - 50264670
Alignment:
| Q |
6 |
ataagaatatactgaatgatatataaaaaggtgtctatgatactcaatgtgagtttgtatcctacaagaaaaatttgtgattaatttacaatacattttc |
105 |
Q |
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| T |
50264893 |
ataagaatatactgaatgatatataaaaaggtgtctatgatactcaatgtgagtttgtatcctacaagaaaaatttgtgattaatttacaatacattttc |
50264794 |
T |
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| Q |
106 |
cacttagatgaatgtgaactctcaataaattggaggcacatttgagaattataatgacccaccatcacatgtgaattcacgttgatatgatacatttaca |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
50264793 |
cacttagatgaatgtgaactctcaataaattggaggcacatttgagaattataatgacccaccatcacatgtgaattcacgtt-----gatacatttaca |
50264699 |
T |
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| Q |
206 |
acattctactttggtaggtaaagattcat |
234 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
50264698 |
acattctactttggtaggtaaagattcat |
50264670 |
T |
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