View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4254-Insertion-7 (Length: 124)

Name: NF4254-Insertion-7
Description: NF4254
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4254-Insertion-7
NF4254-Insertion-7
[»] chr8 (38 HSPs)
chr8 (1-100)||(1292370-1292469)
chr8 (1-91)||(4743120-4743210)
chr8 (1-87)||(40321256-40321342)
chr8 (1-91)||(30143512-30143606)
chr8 (1-93)||(19491604-19491696)
chr8 (1-91)||(6599144-6599235)
chr8 (1-91)||(6674597-6674688)
chr8 (1-108)||(10015234-10015341)
chr8 (1-91)||(1345277-1345367)
chr8 (1-91)||(18141990-18142080)
chr8 (1-91)||(4731830-4731924)
chr8 (1-91)||(41366519-41366611)
chr8 (9-108)||(3073789-3073887)
chr8 (1-87)||(5689447-5689533)
chr8 (1-82)||(18105977-18106058)
chr8 (18-91)||(30291780-30291853)
chr8 (1-91)||(42498367-42498461)
chr8 (3-91)||(43036595-43036687)
chr8 (1-108)||(3303572-3303683)
chr8 (1-91)||(15212958-15213052)
chr8 (1-91)||(44304028-44304121)
chr8 (1-67)||(27811478-27811544)
chr8 (1-91)||(17982826-17982919)
chr8 (1-91)||(34254233-34254326)
chr8 (1-91)||(34256409-34256502)
chr8 (1-91)||(1746121-1746214)
chr8 (1-62)||(3051029-3051090)
chr8 (1-91)||(19945261-19945354)
chr8 (1-91)||(4733878-4733972)
chr8 (1-72)||(33352345-33352416)
chr8 (1-91)||(31218430-31218523)
chr8 (44-108)||(8965640-8965704)
chr8 (7-91)||(12702541-12702630)
chr8 (9-87)||(32902096-32902175)
chr8 (1-72)||(2627935-2628004)
chr8 (9-83)||(8153967-8154040)
chr8 (56-108)||(7597771-7597823)
chr8 (9-40)||(4162692-4162723)
[»] chr3 (38 HSPs)
chr3 (3-108)||(32891259-32891364)
chr3 (1-96)||(21350909-21351004)
chr3 (1-91)||(9666372-9666462)
chr3 (1-91)||(29196292-29196382)
chr3 (1-91)||(31314617-31314707)
chr3 (18-108)||(53921426-53921516)
chr3 (1-83)||(39153266-39153348)
chr3 (1-91)||(22834908-22834999)
chr3 (1-88)||(44700385-44700472)
chr3 (8-91)||(761019-761104)
chr3 (1-91)||(29811040-29811134)
chr3 (1-91)||(23391814-23391905)
chr3 (1-87)||(29813239-29813327)
chr3 (9-101)||(51352048-51352139)
chr3 (13-108)||(2074994-2075088)
chr3 (1-91)||(16499201-16499290)
chr3 (8-91)||(29682531-29682616)
chr3 (1-87)||(7762442-7762532)
chr3 (1-91)||(51398986-51399080)
chr3 (1-91)||(7764637-7764731)
chr3 (1-91)||(19683790-19683884)
chr3 (1-91)||(37408631-37408725)
chr3 (2-91)||(23410234-23410325)
chr3 (1-91)||(40734670-40734763)
chr3 (1-91)||(5258046-5258139)
chr3 (1-91)||(5260225-5260318)
chr3 (1-87)||(9581459-9581549)
chr3 (9-98)||(27305625-27305713)
chr3 (10-91)||(5236368-5236453)
chr3 (1-91)||(40735555-40735648)
chr3 (1-91)||(32744349-32744432)
chr3 (1-93)||(9636026-9636122)
chr3 (38-101)||(33191993-33192056)
chr3 (11-100)||(2020323-2020412)
chr3 (1-42)||(9634723-9634764)
chr3 (6-72)||(23200043-23200108)
chr3 (46-77)||(25173519-25173550)
chr3 (1-72)||(45095359-45095429)
[»] chr2 (40 HSPs)
chr2 (1-96)||(1345634-1345729)
chr2 (1-91)||(11067477-11067567)
chr2 (1-90)||(39285012-39285101)
chr2 (1-108)||(11690656-11690764)
chr2 (1-91)||(33162356-33162446)
chr2 (1-81)||(2838132-2838212)
chr2 (9-108)||(11049709-11049808)
chr2 (1-91)||(24885761-24885852)
chr2 (1-91)||(11151497-11151587)
chr2 (1-91)||(36317915-36318005)
chr2 (1-91)||(723648-723740)
chr2 (1-91)||(14202325-14202417)
chr2 (1-91)||(14633729-14633821)
chr2 (1-91)||(34139674-34139766)
chr2 (1-91)||(42362520-42362612)
chr2 (1-91)||(36773734-36773824)
chr2 (1-91)||(36987977-36988071)
chr2 (1-72)||(38312435-38312506)
chr2 (1-91)||(17057271-17057365)
chr2 (1-91)||(17085254-17085348)
chr2 (1-91)||(6594906-6595001)
chr2 (1-91)||(2334319-2334413)
chr2 (1-87)||(29868045-29868135)
chr2 (9-101)||(13121928-13122019)
chr2 (1-91)||(5723158-5723251)
chr2 (11-108)||(7815190-7815287)
chr2 (1-91)||(4503035-4503128)
chr2 (1-91)||(36205567-36205660)
chr2 (1-91)||(45099927-45100020)
chr2 (1-72)||(4484230-4484300)
chr2 (1-72)||(30833544-30833614)
chr2 (42-108)||(17490095-17490161)
chr2 (27-101)||(26353346-26353419)
chr2 (11-108)||(4561240-4561334)
chr2 (9-101)||(12123500-12123591)
chr2 (1-72)||(32289764-32289834)
chr2 (46-105)||(42019821-42019879)
chr2 (46-88)||(41446315-41446357)
chr2 (44-101)||(7596960-7597017)
chr2 (44-93)||(28672102-28672151)
[»] chr4 (40 HSPs)
chr4 (1-91)||(47038317-47038407)
chr4 (1-108)||(31474306-31474413)
chr4 (1-91)||(46147297-46147387)
chr4 (1-91)||(52467260-52467350)
chr4 (1-91)||(36994695-36994785)
chr4 (1-108)||(6542085-6542192)
chr4 (1-91)||(26175538-26175632)
chr4 (1-108)||(4588114-4588221)
chr4 (1-91)||(45687089-45687178)
chr4 (1-91)||(48893544-48893634)
chr4 (1-91)||(56178538-56178632)
chr4 (1-72)||(5429874-5429945)
chr4 (1-91)||(9927361-9927454)
chr4 (1-91)||(5871992-5872084)
chr4 (1-91)||(34570316-34570410)
chr4 (1-86)||(36463297-36463382)
chr4 (9-101)||(37229636-37229727)
chr4 (1-72)||(5369984-5370055)
chr4 (1-72)||(37740820-37740891)
chr4 (7-108)||(24969820-24969924)
chr4 (11-101)||(29056521-29056610)
chr4 (1-108)||(52095264-52095375)
chr4 (1-91)||(12739452-12739546)
chr4 (1-91)||(12743827-12743921)
chr4 (1-91)||(29254666-29254760)
chr4 (1-108)||(54199810-54199920)
chr4 (1-91)||(48143216-48143314)
chr4 (9-108)||(37754874-37754972)
chr4 (18-101)||(48142300-48142382)
chr4 (21-108)||(51337219-51337306)
chr4 (44-108)||(21703784-21703848)
chr4 (9-101)||(5207755-5207848)
chr4 (1-91)||(52082565-52082659)
chr4 (8-91)||(29999719-29999805)
chr4 (32-101)||(5350071-5350140)
chr4 (1-91)||(13992193-13992288)
chr4 (10-108)||(39593647-39593745)
chr4 (18-69)||(3913775-3913826)
chr4 (3-66)||(31495209-31495271)
chr4 (53-94)||(6766043-6766084)
[»] chr7 (44 HSPs)
chr7 (1-108)||(31105298-31105406)
chr7 (1-91)||(41317340-41317430)
chr7 (1-91)||(1113829-1113919)
chr7 (1-91)||(24525408-24525498)
chr7 (1-91)||(36146314-36146404)
chr7 (1-91)||(8153514-8153604)
chr7 (1-96)||(26417483-26417582)
chr7 (1-108)||(31519058-31519157)
chr7 (8-91)||(41648922-41649007)
chr7 (18-91)||(12097790-12097863)
chr7 (1-108)||(48489586-48489697)
chr7 (1-101)||(23344135-23344235)
chr7 (1-72)||(18126841-18126912)
chr7 (1-97)||(23564967-23565064)
chr7 (1-90)||(43864417-43864510)
chr7 (1-72)||(14069735-14069806)
chr7 (1-72)||(14379763-14379834)
chr7 (4-91)||(38671129-38671218)
chr7 (1-108)||(47676038-47676149)
chr7 (1-91)||(19502351-19502445)
chr7 (1-91)||(47673846-47673940)
chr7 (12-108)||(36574434-36574529)
chr7 (1-72)||(4586356-4586427)
chr7 (1-91)||(25616026-25616121)
chr7 (1-91)||(495889-495979)
chr7 (1-91)||(27347989-27348083)
chr7 (1-87)||(48491754-48491842)
chr7 (1-87)||(23555217-23555307)
chr7 (1-91)||(29991226-29991319)
chr7 (12-72)||(31732882-31732942)
chr7 (1-91)||(4178946-4179039)
chr7 (9-101)||(4253443-4253534)
chr7 (1-57)||(30024658-30024714)
chr7 (1-72)||(39731567-39731637)
chr7 (1-93)||(35854086-35854182)
chr7 (9-101)||(40808750-40808841)
chr7 (1-96)||(48408973-48409073)
chr7 (46-101)||(3904418-3904473)
chr7 (45-108)||(26639481-26639544)
chr7 (6-72)||(43504058-43504123)
chr7 (29-91)||(2759127-2759193)
chr7 (1-93)||(25766859-25766956)
chr7 (9-85)||(18396488-18396563)
chr7 (69-108)||(5513641-5513680)
[»] chr1 (44 HSPs)
chr1 (1-101)||(23555172-23555272)
chr1 (1-108)||(50169116-50169223)
chr1 (1-91)||(40122102-40122192)
chr1 (1-91)||(50167081-50167171)
chr1 (1-87)||(13137882-13137968)
chr1 (1-93)||(41361085-41361177)
chr1 (1-91)||(28265460-28265550)
chr1 (1-91)||(45644260-45644350)
chr1 (1-91)||(834071-834163)
chr1 (1-91)||(3847025-3847117)
chr1 (1-101)||(16455783-16455883)
chr1 (1-91)||(1833685-1833775)
chr1 (1-87)||(10925402-10925488)
chr1 (27-108)||(927908-927989)
chr1 (1-91)||(3157037-3157131)
chr1 (1-72)||(28220128-28220199)
chr1 (1-108)||(46065073-46065179)
chr1 (1-108)||(196811-196920)
chr1 (1-91)||(13659243-13659332)
chr1 (1-91)||(3189503-3189597)
chr1 (1-91)||(3198320-3198414)
chr1 (1-91)||(3207159-3207253)
chr1 (1-67)||(4552550-4552616)
chr1 (3-101)||(15820469-15820567)
chr1 (5-91)||(37503463-37503553)
chr1 (9-101)||(5460069-5460160)
chr1 (1-91)||(44455332-44455426)
chr1 (1-72)||(28223323-28223394)
chr1 (1-91)||(37559767-37559863)
chr1 (1-75)||(8550686-8550760)
chr1 (1-72)||(31659433-31659504)
chr1 (1-91)||(30476348-30476442)
chr1 (1-91)||(49918522-49918616)
chr1 (1-72)||(51765595-51765665)
chr1 (44-101)||(3460858-3460915)
chr1 (1-91)||(20762845-20762934)
chr1 (1-72)||(13316254-13316324)
chr1 (9-67)||(8870637-8870695)
chr1 (38-108)||(16914118-16914188)
chr1 (51-101)||(36683842-36683892)
chr1 (9-108)||(37282605-37282704)
chr1 (18-101)||(2262898-2262979)
chr1 (31-101)||(44646743-44646810)
chr1 (31-101)||(44650101-44650168)
[»] chr5 (32 HSPs)
chr5 (1-93)||(8565852-8565945)
chr5 (1-108)||(538180-538287)
chr5 (1-92)||(16649736-16649827)
chr5 (1-108)||(42927046-42927159)
chr5 (1-108)||(16452235-16452345)
chr5 (1-72)||(42426137-42426208)
chr5 (1-72)||(42428332-42428403)
chr5 (1-108)||(13239907-13240018)
chr5 (1-72)||(19806558-19806629)
chr5 (1-91)||(28750557-28750651)
chr5 (1-91)||(30682825-30682919)
chr5 (1-91)||(32636996-32637090)
chr5 (1-91)||(37439314-37439408)
chr5 (1-108)||(31183126-31183240)
chr5 (1-108)||(30182744-30182854)
chr5 (18-91)||(533941-534014)
chr5 (1-87)||(13343237-13343326)
chr5 (1-62)||(13488406-13488467)
chr5 (8-91)||(33831852-33831938)
chr5 (1-72)||(39468451-39468522)
chr5 (1-108)||(36073945-36074055)
chr5 (44-101)||(13695639-13695696)
chr5 (1-91)||(25412933-25413026)
chr5 (1-91)||(5887336-5887430)
chr5 (1-72)||(26178082-26178152)
chr5 (1-72)||(16409675-16409745)
chr5 (1-72)||(26170962-26171032)
chr5 (18-101)||(30897575-30897657)
chr5 (32-105)||(9049285-9049352)
chr5 (59-101)||(30793298-30793340)
chr5 (50-93)||(9299754-9299797)
chr5 (69-99)||(3075632-3075662)
[»] chr6 (18 HSPs)
chr6 (3-95)||(14521585-14521677)
chr6 (1-91)||(3038829-3038919)
chr6 (1-91)||(33211091-33211181)
chr6 (8-91)||(16569194-16569279)
chr6 (1-72)||(9182933-9183004)
chr6 (1-99)||(28137312-28137412)
chr6 (1-83)||(26954192-26954274)
chr6 (1-91)||(5408972-5409065)
chr6 (1-91)||(5413297-5413390)
chr6 (2-91)||(33160253-33160347)
chr6 (9-97)||(4045584-4045671)
chr6 (1-91)||(31404577-31404670)
chr6 (8-91)||(5406109-5406195)
chr6 (8-91)||(5410434-5410520)
chr6 (1-91)||(16452230-16452324)
chr6 (39-108)||(12221048-12221117)
chr6 (1-91)||(30834436-30834531)
chr6 (1-40)||(2171429-2171468)
[»] scaffold1668 (1 HSPs)
scaffold1668 (1-91)||(1404-1494)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-108)||(20317-20428)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-91)||(149004-149093)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-108)||(114758-114869)
[»] scaffold0219 (1 HSPs)
scaffold0219 (19-101)||(27366-27447)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-91)||(434706-434800)
[»] scaffold0491 (2 HSPs)
scaffold0491 (1-66)||(8635-8699)
scaffold0491 (1-72)||(11061-11131)
[»] scaffold1519 (1 HSPs)
scaffold1519 (1-72)||(1112-1182)


Alignment Details
Target: chr8 (Bit Score: 84; Significance: 2e-40; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 2e-40
Query Start/End: Original strand, 1 - 100
Target Start/End: Original strand, 1292370 - 1292469
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||    
T  1292370 ataacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacgagcaaaagataaggagagaagagaaacaaacacaccaagaaatgttt 1292469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4743120 - 4743210
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  4743120 ataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcgaaagataaagagagaagagaaacaaacacaccaa 4743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 40321342 - 40321256
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacaca 87  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  40321342 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacaca 40321256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30143606 - 30143512
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  30143606 ataacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 30143512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19491604 - 19491696
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaaga 93  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  19491604 ataacaacacctatatctaatctaggaatcaaagtaaaaagctcaaaaccacaaacaaaagataaagtgagaaaagaaacaaacacaccaaga 19491696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6599235 - 6599144
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaac-aaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  6599235 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagaaaaagataaagggagaagagaaacaaaacacaccaa 6599144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6674688 - 6674597
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaac-aaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||    
T  6674688 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagaaaaagataaagggagaagagaaacaaaacacaccaa 6674597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 10015341 - 10015234
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    ||||||| |||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||    
T  10015341 ataacaatacctagatctaatttagtaatcaaagtgaaaagttcaaaaccacaagcaaaagataaggagagaagagaaacaaatacaccaagaaatgatt 10015242  T
Q  101 atccagtt 108  Q
    | ||||||    
T  10015241 acccagtt 10015234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1345277 - 1345367
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||| ||||||||||| |||||||| |||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  1345277 ataataacacctagatctaatctagtaatcaaagtgaaaatctcaaaatcacaagcaaaagataaagagagaagagaaacaaacacaccaa 1345367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18142080 - 18141990
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||    
T  18142080 ataacaacacctacatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagcagagaaacaagcacaccaa 18141990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4731924 - 4731830
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  4731924 ataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 4731830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41366519 - 41366611
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa-gggagaagagaaac-aaacacaccaa 91  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  41366519 ataacaacacctagatctaatataggaatcaaagtgaaaagcacaaaaccacaaacaaaagataaatgggagaagagaaacaaaacacaccaa 41366611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 3073789 - 3073887
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||||||||||||||||| |||||||| ||  |||||||||||||||||||||||| || |||||||||||||||||  ||||||||||| ||||||    
T  3073789 acctagatttaatctaggaat-aaagtgaagagtacaaaaccacaagcaaaagataaagagataagagaaacaaacacacatagaaatgtttacccagtt 3073887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 5689533 - 5689447
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacaca 87  Q
    ||||||||| ||| || |||| ||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  5689533 ataacaacatctaaatctaatttagtaatcaaagtgaaaagctcaaaaccacaagtaaaagataaagagagaagagaaacaaacaca 5689447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 18105977 - 18106058
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaa 82  Q
    |||||| ||||||||| ||||||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||||||    
T  18105977 ataacatcacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcaaaagataaagagagaagagaaacaa 18106058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30291853 - 30291780
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||| |||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30291853 taatctagtaatcaaagtggaaagttcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 30291780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42498461 - 42498367
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| |||||    || ||||||||||||||||    
T  42498461 ataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagggaaacaaacacaccaa 42498367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 43036687 - 43036595
Alignment:
Q  3 aacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||| ||||||||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  43036687 aacaccacctagatctaatctagtaaccaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 43036595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 3303572 - 3303683
Alignment:
Q  1 ataacaacacctagatttaatctaggaatc----aaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaat 96  Q
    ||||| |||||||||| |||||||||||||    |||||||||||  ||||| |||||||||||||||||| |||||||||||||||||||||||  | |    
T  3303572 ataactacacctagatctaatctaggaatcaatcaaagtgaaaagtacaaaatcacaagcaaaagataaagagagaagagaaacaaacacaccaaagatt 3303671  T
Q  97 gtttatccagtt 108  Q
    ||||| ||||||    
T  3303672 gtttacccagtt 3303683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15213052 - 15212958
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||| ||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||    |||| ||||||||||||||    
T  15213052 ataacagcaccttgatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 15212958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44304121 - 44304028
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  44304121 ataacaacacctagatctaatctagaaatcaaagtgaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 44304028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27811544 - 27811478
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 67  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||| ||||||||||||||||||    
T  27811544 ataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaatcacaagcaaaagataaag 27811478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17982919 - 17982826
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||    |||||||||||||||||||    
T  17982919 ataacagcacctagatctaatctaggaatcaaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 17982826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34254233 - 34254326
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  34254233 ataacagcacctagatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 34254326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34256409 - 34256502
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  34256409 ataacagcacctagatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 34256502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1746121 - 1746214
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||||||||| |||||| | ||||||||||||||| ||||| |||||    |||||||||||||||||||    
T  1746121 ataacagcacctagatctaatctaggaatcaaagtcaaaagcgc-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 1746214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3051029 - 3051090
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaaga 62  Q
    |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||| ||||    
T  3051029 ataacaacacctagatctaatctagaaattaaagtgaaaagctcaaaaccacaagcataaga 3051090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19945261 - 19945354
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||| ||||||||||| | ||||||||||||||| ||||| |||||    |||||||||||||||||||    
T  19945261 ataacagcacctagatctaatctaggaatcgaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 19945354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4733972 - 4733878
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg--gagaagaga--aacaaacacaccaa 91  Q
    ||||||||||||||||  ||| |||||| |||| |||||||| |||||||||||| ||||||||||||  |||||||||  ||||||||||||||    
T  4733972 ataacaacacctagatcaaatgtaggaaacaaaatgaaaagcacaaaaccacaaggaaaagataaaggtagagaagagaggaacaaacacaccaa 4733878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 33352416 - 33352345
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    ||||||||||||| || |||||||| |||||||||||||| | |||| |||||||||||||||||| |||||    
T  33352416 ataacaacacctaaatctaatctagaaatcaaagtgaaaaacacaaatccacaagcaaaagataaaaggaga 33352345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31218523 - 31218430
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||| ||||||||||||| ||||| || ||||| |||||||| |||||    |||||||||||||||||||    
T  31218523 ataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaa-cataagcacaagataaaaggagagaagagagaaacaaacacaccaa 31218430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 8965640 - 8965704
Alignment:
Q  44 caaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||||| | ||||||||| ||||||    
T  8965640 caaaaccacaaacaaaagataaagagagaaaagaaacaaacacaccgataaatgtttacccagtt 8965704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 12702541 - 12702630
Alignment:
Q  7 acacctagatttaatctaggaa-tcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||| |||||||| || |||||||||||| | |||||||||||||| ||||||||||||||    ||||||||||||| |||||    
T  12702541 acacctagatctaatctagaaaatcaaagtgaaaaacacaaaaccacaagcacaagataaagggagagaagagagaaacaaacataccaa 12702630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 32902096 - 32902175
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa--gggagaagagaaacaaacaca 87  Q
    |||||||| ||||||||||| ||| ||||||| | |||||||| ||||||||||||||   | ||||||||||||||||||    
T  32902096 acctagatctaatctaggaaccaa-gtgaaaaacacaaaaccaaaagcaaaagataaaagagaagaagagaaacaaacaca 32902175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 2628004 - 2627935
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| | |||||||||||  |||| |||||||| |||||||| |||||    
T  2628004 ataacaacacctagatctaatctaggaaac-aagtgaaaagcataaaa-cacaagcacaagataaaaggaga 2627935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 83
Target Start/End: Complemental strand, 8154040 - 8153967
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaa 83  Q
    |||||||| |||||||||||| |||||||||| | |||||  ||| ||||||||||||   ||||||||||||||    
T  8154040 acctagatgtaatctaggaat-aaagtgaaaaacacaaaattacatgcaaaagataaacaaagaagagaaacaaa 8153967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 7597823 - 7597771
Alignment:
Q  56 caaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||||||||||| |||||||||||||  |||| ||| |||| |||||||||||    
T  7597823 caaaagataaagagagaagagaaacacgcacatcaataaatatttatccagtt 7597771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 40
Target Start/End: Complemental strand, 4162723 - 4162692
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaa 40  Q
    |||||||| |||||||||||||||||||||||    
T  4162723 acctagatctaatctaggaatcaaagtgaaaa 4162692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 4e-39; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 32891364 - 32891259
Alignment:
Q  3 aacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttat 102  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||    
T  32891364 aacaacacctagatctaatataggaatcaaagtgaaaaactcaaaaccacaagcaaaagataaggagagaagagaaacaaacacaccaagaaatgattat 32891265  T
Q  103 ccagtt 108  Q
    ||||||    
T  32891264 ccagtt 32891259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21350909 - 21351004
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaat 96  Q
    |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  21350909 ataacaacacttagatctaatctaggaatcaaagtgaaaagctcataaccacaagcataagataaagtgagaagagaaacaaacacaccaagaaat 21351004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9666372 - 9666462
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  9666372 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagataagagaaacaaacacaccaa 9666462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29196292 - 29196382
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  29196292 ataacaacacctagatctaatctggtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 29196382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 31314707 - 31314617
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31314707 ataacaacacctaaatataatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 31314617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 18 - 108
Target Start/End: Original strand, 53921426 - 53921516
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| |||||||||||||||||||    
T  53921426 taatctaggaatcaaagtgaaaagctcaaaaccacaaacaaaatataaagagagaagagaaacaaacacactaagaaatgtttatccagtt 53921516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 39153266 - 39153348
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaa 83  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  39153266 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaagggagaagagaaacaaa 39153348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 22834908 - 22834999
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaa-caaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||    
T  22834908 ataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaggaagaagagaaagaaaacacaccaa 22834999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 44700385 - 44700472
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacac 88  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||    
T  44700385 ataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaggataaagagagaagagaaacaaacacac 44700472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 761104 - 761019
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  761104 cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 761019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29811134 - 29811040
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg--gagaagaga--aacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  29811134 ataacagcacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagatgaacaaacacaccaa 29811040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 23391814 - 23391905
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaag-ctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||  | |||||||||||||||||||||||| |||||||||||||||||||||||    
T  23391814 ataacaacacctagatctaatctagtaatcaaagtgaaaaaacacaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 23391905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29813327 - 29813239
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagaga--aacaaacaca 87  Q
    |||||| ||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||    
T  29813327 ataacagcacctagatctaatctaagaatcaaagtgaaaagctcaaaaccacaaccaaaagataaagggagaagagaggaacaaacaca 29813239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 51352048 - 51352139
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||| |||||||||||||||| |||||| | |||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||    
T  51352048 acctagatctaatctaggaatcaaa-tgaaaaacacaaaaccacaagtaaaagataaagagagaagagaaacaaacacatcaagaaatgttta 51352139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 2074994 - 2075088
Alignment:
Q  13 agatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||||||||||||||| ||| ||||||| | |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||| ||||||    
T  2074994 agatttaatctaggaaacaa-gtgaaaaacacaaaaccacaagcaaaagataaagagagaagagaaataaacacacccagaaatgtttacccagtt 2075088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 16499290 - 16499201
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||| || |||||||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  16499290 ataacaacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaagagagaagagaaacaaatacaccaa 16499201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 29682616 - 29682531
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaa--gagaaacaaacacaccaa 91  Q
    ||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  29682616 cacctagatctaacctaggaatcaaagtgaaaaactcaaaaccacaagcaaaagataaagggagaagagagaaacatacacaccaa 29682531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7762532 - 7762442
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacaca 87  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||| |||||    |||||||||||||||    
T  7762532 ataacaacacctagatctaatttaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacaca 7762442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 51399080 - 51398986
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  51399080 ataacagcacctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 51398986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7764731 - 7764637
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||| |||||||||||||||||| ||||||||||| ||||||||||| |||||    |||||||||||||||||||    
T  7764731 ataacagcacctagatctaatcttggaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaa 7764637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 19683790 - 19683884
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||| |||||||||| | ||||||||||||||||||||||| |||||    |||||||||||||||||||    
T  19683790 ataacagcacctagatctaatctaggaataaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 19683884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37408725 - 37408631
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| | ||| ||||||||||||||||| |||||    |||||||||||||||||||    
T  37408725 ataacagcacctagatctaatctaggaatcaaagtgaaaagcactaaatcacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 37408631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 23410234 - 23410325
Alignment:
Q  2 taacaacacctagatttaatctaggaatcaaagtgaaaag--ctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||||| |||||||| ||||||||| ||||   |||||||||||||||||||||||||| ||||| | |||||||||||||||    
T  23410234 taacaacacctagatctaatctagtaatcaaagtaaaaaaaactcaaaaccacaagcaaaagataaagagagaatataaacaaacacaccaa 23410325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40734763 - 40734670
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg-gagaagaga--aacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||| ||||| |||| |||||||||||||||||||| |||||||||  ||||||||| ||||    
T  40734763 ataacagcacctagatctaatctaggaatcaaagtgcaaagcacaaatccacaagcaaaagataaaggagagaagagaggaacaaacactccaa 40734670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5258046 - 5258139
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||    |||||||||||||||||||    
T  5258046 ataacagcacctagatctaatctaggaatcaaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 5258139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5260225 - 5260318
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||||| ||||| |||||    |||||||||||||||||||    
T  5260225 ataacaacacctagatctaatttaggaatcaaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 5260318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9581549 - 9581459
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacaca 87  Q
    |||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||| || |||||||||||    |||||||||||||||    
T  9581549 ataacagcacctagatctaatctatgaatcaaagtgaaaagcacaaaaccacaagcacaaaataaagggagagaagagagaaacaaacaca 9581459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 27305625 - 27305713
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgt 98  Q
    |||||||| |||||||||| | |||||||||| | ||||||||||| |||||||||||  |||||||||||||||||||| |||||||||    
T  27305625 acctagatctaatctaggagt-aaagtgaaaaacacaaaaccacaaacaaaagataaatagagaagagaaacaaacacacaaagaaatgt 27305713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 5236368 - 5236453
Alignment:
Q  10 cctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    ||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||    |||| ||||||||||||||    
T  5236368 cctagatctaatctaggaatcaaagtgaaaagcacaaatccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 5236453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 40735648 - 40735555
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg-gagaagaga--aacaaacacaccaa 91  Q
    |||||| ||||||||| |||| |||||| ||||||||||||| |||| |||||||||||||||||||| |||||||||  |||||| |||||||    
T  40735648 ataacagcacctagatctaatataggaaccaaagtgaaaagcacaaatccacaagcaaaagataaaggagagaagagaggaacaaatacaccaa 40735555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32744349 - 32744432
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||       |||||||||||||||||||| || | ||||||||||||||||||    
T  32744349 ataacaacacctagatctaatctagaaatcaaagtgaaaa-------accacaagcaaaagataaagagatatgagaaacaaacacaccaa 32744432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 9636026 - 9636122
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagat-aaagggaga----agagaaacaaacacaccaaga 93  Q
    |||||| ||||||||| |||||||||||||||||||||||||   ||| |||||||| ||||| |||||||||    |||||||||||||||||||||    
T  9636026 ataacagcacctagatctaatctaggaatcaaagtgaaaagc-ataaatcacaagcacaagataaaagggagagcagagagaaacaaacacaccaaga 9636122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 33192056 - 33191993
Alignment:
Q  38 aaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||| ||||||||||| |||||||||||  ||||| ||||||||||||||||| |||||||||    
T  33192056 aaagcacaaaaccacaaacaaaagataaatcgagaaaagaaacaaacacaccaaaaaatgttta 33191993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 11 - 100
Target Start/End: Complemental strand, 2020412 - 2020323
Alignment:
Q  11 ctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    |||||||||||||||||| |||    |||||| ||||| |||||||| ||||||||| |||||  ||||||||||||| ||||| |||||    
T  2020412 ctagatttaatctaggaaccaagtataaaagcgcaaaatcacaagcagaagataaagagagaattgaaacaaacacactaagaattgttt 2020323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 9634723 - 9634764
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagc 42  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  9634723 ataacagcacctagatctaatctaggaatcaaagtgaaaagc 9634764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 23200043 - 23200108
Alignment:
Q  6 aacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    ||||||||||| ||||||||||| |||| |||||| | | |||||||||||| |||||||| |||||    
T  23200043 aacacctagatctaatctaggaaacaaaatgaaaaacac-aaaccacaagcataagataaaaggaga 23200108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 77
Target Start/End: Original strand, 25173519 - 25173550
Alignment:
Q  46 aaaccacaagcaaaagataaagggagaagaga 77  Q
    |||||||||||||||||||||||||| |||||    
T  25173519 aaaccacaagcaaaagataaagggaggagaga 25173550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 45095429 - 45095359
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||| ||||| ||||||| ||||||||| | ||| | |||| |||||||||||||||||| |||||    
T  45095429 ataacagcacatagatctaatctatgaatcaaagagtaaaacacaaa-ccacaagcaaaagataaaaggaga 45095359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 6e-38; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 1345729 - 1345634
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaat 96  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||    
T  1345729 ataacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaatcataagataaagtgagaagagaaacaaacacaccaagaaat 1345634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 11067567 - 11067477
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  11067567 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 11067477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 9e-37
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 39285101 - 39285012
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacacca 90  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  39285101 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacacca 39285012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 11690764 - 11690656
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaac-aaacacaccaagaaatgtt 99  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  | ||||    
T  11690764 ataacaacacctagatctaatctaggaattaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaaacacaccaaagattgtt 11690665  T
Q  100 tatccagtt 108  Q
     ||||||||    
T  11690664 gatccagtt 11690656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33162356 - 33162446
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  33162356 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaatagagaagagaaacaaacacaccaa 33162446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 8e-34
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 2838212 - 2838132
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaaca 81  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2838212 ataacaacacctagatataatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagtgagaagagaaaca 2838132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 9 - 108
Target Start/End: Complemental strand, 11049808 - 11049709
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||    
T  11049808 acctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaatataaagagagaagagaaacaaacacacaaagaaatgtttacccagtt 11049709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 24885852 - 24885761
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaac-aaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24885852 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagaagagaaacaaaacacaccaa 24885761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11151497 - 11151587
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  11151497 ataacaacagctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaaacaaaagataaagagagaagagaaacaaacacaccaa 11151587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36317915 - 36318005
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||  |||||| |||||||||||||||    
T  36317915 ataacaacacctagatttaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagaaagaagataaacaaacacaccaa 36318005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 5e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 723648 - 723740
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  723648 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 723740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14202325 - 14202417
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagag--aaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  14202325 ataacaacacctagatctaatctagtaatcaaagtgaaaagcttaaaaccacaagcaaaagataaagagagaagagataaacaaacacaccaa 14202417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 14633729 - 14633821
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||  |||||||||||||||||||    
T  14633729 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaatcaaaagataaagagagaatagagaaacaaacacaccaa 14633821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34139674 - 34139766
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  34139674 ataacaagacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 34139766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 42362612 - 42362520
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  42362612 ataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 42362520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36773824 - 36773734
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||| |||  ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  36773824 ataacaacacctagatctaatctagtaataaaaaagaaaagctcaaaaccacaagcaaaagataaagaaagaagagaaacaaacacaccaa 36773734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36987977 - 36988071
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||| |||||    |||||||||||||||||||    
T  36987977 ataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaagccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 36988071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 38312506 - 38312435
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38312506 ataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggaga 38312435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17057271 - 17057365
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  17057271 ataacagcacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagacgagaggaacaaacacaccaa 17057365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 17085254 - 17085348
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  17085254 ataacagcacctagatctaatctaggaattaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagacgagaggaacaaacacaccaa 17085348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 6594906 - 6595001
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagat-aaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||| |||||||||||||||| |||||||||||||||||||| |||||||||    |||||||||||||||||||    
T  6594906 ataacagcacctagatctaatctagaaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaagggagagaagagagaaacaaacacaccaa 6595001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 2334319 - 2334413
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||| | ||||||||||||||  ||||||||||||||| ||||||||||||||    |||||||||||||||||||    
T  2334319 ataacaacacctagatctaatctggtaatcaaagtgaaaacttcaaaaccacaagcacaagataaagggagagaagagagaaacaaacacaccaa 2334413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 29868135 - 29868045
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacaca 87  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| |||||||| |||||    |||||||||||||||    
T  29868135 ataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcacaagataaacggagagaagagagaaacaaacaca 29868045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 13122019 - 13121928
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||| |||||||| |||||| ||||||| |  ||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||    
T  13122019 acctagatgtaatctagaaatcaa-gtgaaaaacataaaaccacaagcaaaagataaagagagaagagaaacaaacacaacaataaatgttta 13121928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5723158 - 5723251
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||  ||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  5723158 ataacaacacctagatctaatctaggaatcaaaaagaaaagcac-aaaccacaagcaaaagataaaaggagagaatagagaaacaaacacaccaa 5723251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 11 - 108
Target Start/End: Original strand, 7815190 - 7815287
Alignment:
Q  11 ctagatttaatctaggaatcaaagtgaaaag-ctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||||| ||||||||||||||| |||||||  | ||||| | ||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||||    
T  7815190 ctagatctaatctaggaatcaa-gtgaaaaaacacaaaatcgcaagcaaaagataaagaaagaagagaaacaaacacaccaagaaatatttacccagtt 7815287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4503035 - 4503128
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||| ||||||||||||| ||||| |||||||| |||||||| |||||    |||||||||||||||||||    
T  4503035 ataacagcacctagatctaatctaggaaacaaagtgaaaagcacaaaa-cacaagcacaagataaaaggagagaagagagaaacaaacacaccaa 4503128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36205567 - 36205660
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||||||||||||||||   ||||||||||||||| ||||| |||||    |||||||||||||||||||    
T  36205567 ataacagcacctagatctaatctaggaatcaaagtgaaaagc-agaaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 36205660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 45100020 - 45099927
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| | ||| ||||||||||| ||||| |||||    |||||||||||||||||||    
T  45100020 ataacagcacctagatctaatctaggaatcaaagtgaaaagcac-aaatcacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 45099927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 4484230 - 4484300
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||| |||||||| |||||    
T  4484230 ataacaacacctagatctaatctaggaaacaaagtgaaaagc-aaaaaccacaagcacaagataaaaggaga 4484300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 30833614 - 30833544
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||| |||||||| |||||    
T  30833614 ataacaacacctagatctaatctaggaaacaaagtgaaaagcac-aaaccacaagcacaagataaaaggaga 30833544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 17490095 - 17490161
Alignment:
Q  42 ctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| |  |||||||||||| ||||||    
T  17490095 ctcaaaaccacaagcaaatgataaagagagaagagaaacaaacatattaagaaatgtttacccagtt 17490161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 27 - 101
Target Start/End: Complemental strand, 26353419 - 26353346
Alignment:
Q  27 aatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||||||||| | |||||||||||||||||||||| | ||| ||||||||||||||| ||| |||||||||    
T  26353419 aatcaaagtgaaaaacacaaaaccacaagcaaaagataaggagaggagagaaacaaacaca-caaaaaatgttta 26353346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 108
Target Start/End: Complemental strand, 4561334 - 4561240
Alignment:
Q  11 ctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||||||||||||| ||| ||| ||| ||| | |||||||||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||||||||    
T  4561334 ctagatttaatctaagaaccaa-gtgtaaaacacaaaaccacaagcaaaagataaatagagaa-agaaagaaacaca-caagaaatgtttatccagtt 4561240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 12123500 - 12123591
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||| || |||||||| |||||| |||||||   ||||| |||||||||||||||||| || ||||||||||||||| ||||||||| ||||    
T  12123500 acctatatctaatctagaaatcaa-gtgaaaaatacaaaatcacaagcaaaagataaagagataagagaaacaaacacgccaagaaatattta 12123591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 32289834 - 32289764
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| |||||||||||||  |||| |||||||| |||||||| |||||    
T  32289834 ataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaa-cacaagcacaagataaaaggaga 32289764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 105
Target Start/End: Original strand, 42019821 - 42019879
Alignment:
Q  46 aaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatcca 105  Q
    |||||||| |||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  42019821 aaaccacaggcaaaa-ataaagagagaagagaaacaaacacaccaagaagtgtttatcca 42019879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 41446357 - 41446315
Alignment:
Q  46 aaaccacaagcaaaagataaagggagaagagaaacaaacacac 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  41446357 aaaccacaagcaaaagataaagagagaagagaaacaaacacac 41446315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 7596960 - 7597017
Alignment:
Q  44 caaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||||||| |||| ||||    
T  7596960 caaaaacaaaagcaaaagataaagagagaagagaaataaacacaccaacaaatattta 7597017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 28672151 - 28672102
Alignment:
Q  44 caaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaaga 93  Q
    ||||| |||||||||| ||||||| |||||||||||||||||||| ||||    
T  28672151 caaaatcacaagcaaaggataaagagagaagagaaacaaacacacaaaga 28672102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 79; Significance: 2e-37; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 79; E-Value: 2e-37
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 47038317 - 47038407
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47038317 ataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 47038407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31474413 - 31474306
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    |||||||||||||||| |||||||||||| |||||||||||| ||||| || |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  31474413 ataacaacacctagatctaatctaggaattaaagtgaaaagcacaaaatcaaaagctaaagataaagggagaagagaaacaaacacaccaagatatgttt 31474314  T
Q  101 atccagtt 108  Q
    | ||||||    
T  31474313 acccagtt 31474306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 46147297 - 46147387
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  46147297 ataacaatacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 46147387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 52467260 - 52467350
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  52467260 ataacaacacatagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 52467350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 36994785 - 36994695
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  36994785 ataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaagataaagagagaagagaaacaaacacgccaa 36994695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 68; E-Value: 8e-31
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 6542085 - 6542192
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    ||||||| |||||||| |||||||||||| |||||||||| | ||||| |||||| ||||||||||| || |||||||||||||||||||||||||||||    
T  6542085 ataacaaaacctagatctaatctaggaattaaagtgaaaaacacaaaatcacaagaaaaagataaagagataagagaaacaaacacaccaagaaatgttt 6542184  T
Q  101 atccagtt 108  Q
    | ||||||    
T  6542185 acccagtt 6542192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 26175538 - 26175632
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  26175538 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 26175632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4588221 - 4588114
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    ||||||| ||| | || |||| |||||||||||||||||||| ||||| |||||||||||||||||| |||| ||||||||||||||||| |||||||||    
T  4588221 ataacaaaaccaatatctaatataggaatcaaagtgaaaagcacaaaatcacaagcaaaagataaagagagaggagaaacaaacacaccatgaaatgttt 4588122  T
Q  101 atccagtt 108  Q
    | ||||||    
T  4588121 acccagtt 4588114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45687089 - 45687178
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||    
T  45687089 ataacaacacctagatc-aatctagtaatcaaagtgaaaagctcaaaaccacaagcaacagataaagagagaaaagaaacaaacacaccaa 45687178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 48893544 - 48893634
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||| | ||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||    
T  48893544 ataacagcacctagatctaatccaagaatcaaagtgaaaagcacaaaatcacaagcaaaagataaagagagaagagaaacaaacacaccaa 48893634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 56178538 - 56178632
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||| |||||    |||||||||||||||||||    
T  56178538 ataacaacacctagatctaatctaggaatgaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 56178632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 5429945 - 5429874
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5429945 ataacagcacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagtaaaagataaagggaga 5429874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 9927361 - 9927454
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg-gaga--agagaaacaaacacaccaa 91  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||  |||| ||||||||||||||    
T  9927361 ataacagcacctagatttaatctaggaatcaaagtgaaaagcacaaatccacaagcaaaagataaaggagagaatagaggaacaaacacaccaa 9927454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 5872084 - 5871992
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||| || ||||  |||||| ||||||||||||    
T  5872084 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccaaaagcaaaagatagagagagaagagagaatcaaacacaccaa 5871992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34570316 - 34570410
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||    |||| ||||||||||||||    
T  34570316 ataacaacacctagatctaatctaagaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 34570410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 36463297 - 36463382
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacac 86  Q
    |||||||||||||||| |||| | | |||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  36463297 ataacaacacctagatctaatttggtaatcaaagcgaaaaactcaaaaccacaagcaaaagataaagagagaagagaaacaaacac 36463382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 37229636 - 37229727
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||| |||| ||||||| |||||||||||| |||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||    
T  37229636 acctagatctaatttaggaat-aaagtgaaaagcacaaaaccataagtaaaagataaagagagaagagaaacaaacacgccaagaaatgttta 37229727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 5369984 - 5370055
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  5369984 ataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggaga 5370055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37740891 - 37740820
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  37740891 ataacagcacctagatctaatgtaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggaga 37740820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 24969924 - 24969820
Alignment:
Q  7 acacctagatttaatctaggaatcaaagtgaaaag---ctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatc 103  Q
    |||||||||| |||||||  |||| |||||||||    |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||||||| |    
T  24969924 acacctagatctaatctactaatctaagtgaaaaaaaactcaaaaccataagcaaacgataaagtgagaagagaaacaaacacaccaagaaatgtttacc 24969825  T
Q  104 cagtt 108  Q
    |||||    
T  24969824 cagtt 24969820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 11 - 101
Target Start/End: Complemental strand, 29056610 - 29056521
Alignment:
Q  11 ctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||| ||||||||||||||| ||||||| | ||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||||    
T  29056610 ctagatctaatctaggaatcaa-gtgaaaaacacaaaaccacaaacaaaagataaagagaaaagagaaacaaacacaccaagaagtgttta 29056521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 52095264 - 52095375
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    |||||||||||||||| |||||||||| |||||| ||||||| |||||||||||| |||||||||| |||||    ||||||||||||||||||| || |    
T  52095264 ataacaacacctagatctaatctaggagtcaaagagaaaagcacaaaaccacaaggaaaagataaaaggagagaagagagaaacaaacacaccaaaaatt 52095363  T
Q  97 gtttatccagtt 108  Q
    ||| | ||||||    
T  52095364 gttcacccagtt 52095375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12739452 - 12739546
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||| || |||||||||||||||| ||||||||||||||||||||||| |||||    |||| ||||||||||||||    
T  12739452 ataacaacacctagatctaatcaagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 12739546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12743827 - 12743921
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||| |||||||||||||||| |||||    |||| ||||||||||||||    
T  12743827 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaactacaagcaaaagataaaaggagaaaagagaggaacaaacacaccaa 12743921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29254760 - 29254666
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||||||| |||||    |||| ||||||||||||||    
T  29254760 ataacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaatggagagaatagaggaacaaacacaccaa 29254666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 54199810 - 54199920
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg-gagaagaga--aacaaacacaccaagaaatg 97  Q
    |||||| ||||||||| ||||||| ||||||||||||||||| |||| |||||||||||| ||||||| |||||||||  |||||||||||||| || ||    
T  54199810 ataacatcacctagatctaatctaagaatcaaagtgaaaagcacaaatccacaagcaaaatataaaggagagaagagaggaacaaacacaccaaaaattg 54199909  T
Q  98 tttatccagtt 108  Q
    || | ||||||    
T  54199910 ttgacccagtt 54199920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 48143314 - 48143216
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtg----aaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||||||||||||||    |||||| ||||| ||||||||||||||||| |||||    |||||||||||||||||||    
T  48143314 ataacaacacctagatctaatctaggaatcaaagtgaaaaaaaagcacaaaatcacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 48143216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 37754874 - 37754972
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||||||| ||||||||| ||||| ||  ||||| ||||||||||| || ||||||||| ||||||| |||||||||||| ||||||| |||||||||||    
T  37754874 acctagatctaatctagggatcaa-gtataaagcccaaaaccacaaacataagataaagagagaagaaaaacaaacacactaagaaatatttatccagtt 37754972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 48142300 - 48142382
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||||||||| ||||||| |   ||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||    
T  48142300 taatctaggaatcaa-gtgaaaaacattaaaccacaatcaaaagataaagagagaagagaaacaaacacaccaaaaaatgttta 48142382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 21 - 108
Target Start/End: Complemental strand, 51337306 - 51337219
Alignment:
Q  21 tctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||||||  |||||| ||| ||||| |||||||||||||||||  ||||||| |||||||||||||| |||||||||| ||||||    
T  51337306 tctaggaatcggagtgaagagcacaaaatcacaagcaaaagataaaaagagaagataaacaaacacaccacgaaatgtttacccagtt 51337219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 21703784 - 21703848
Alignment:
Q  44 caaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||||||| ||||||    
T  21703784 caaaatcacaagcaaaatataaagagagaagagaaacaaacacatcaagaaatgtttacccagtt 21703848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 5207755 - 5207848
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaa--acacaccaagaaatgttta 101  Q
    |||||||| |||| |||||||||| ||||||||| |||||||||| |||| |||||||  ||||||||||||||  ||||||||| |||||||||    
T  5207755 acctagatctaatttaggaatcaa-gtgaaaagcacaaaaccacatgcaacagataaatagagaagagaaacaaatacacaccaataaatgttta 5207848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 52082565 - 52082659
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| | ||||||||||||||  |||||||  |||||||||||||||||||||| |||||    ||| |||||||||||||||    
T  52082565 ataacagcacctagatcttatctaggaatcaaaaagaaaagcataaaaccacaagcaaaagataaaaggagagaagagataaacaaacacaccaa 52082659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 29999719 - 29999805
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    ||||||||| ||||||||||||||||| ||||| | | ||||||||||||||||| ||| |||||    |||||||||||||||||||    
T  29999719 cacctagatctaatctaggaatcaaagagaaaaacac-aaaccacaagcaaaagacaaaaggagagaagagagaaacaaacacaccaa 29999805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 5350140 - 5350071
Alignment:
Q  32 aagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||| | ||| || |||| |||||||||| | ||||||||||||||||||||||| |||||||||    
T  5350140 aagtgaaaaacacaagactacaaacaaaagataacgagagaagagaaacaaacacaccaataaatgttta 5350071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13992193 - 13992288
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagat-aaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||| ||||||||||||||| | ||| ||||||| ||||||| |||||||||    |||||||||||||||||||    
T  13992193 ataacagcacctagatctaatctaggtatcaaagtgaaaagcac-aaatcacaagcaaaaagataaaagggagagaagagagaaacaaacacaccaa 13992288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 10 - 108
Target Start/End: Original strand, 39593647 - 39593745
Alignment:
Q  10 cctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||| |||||||| || ||||   |||||| ||||||| ||||||||||||||   |||| |||| |||||||||||||||| | |||| ||||||    
T  39593647 cctagatctaatctagaaaccaaatgtaaaagcacaaaaccgcaagcaaaagataagaagagaggagacacaaacacaccaagaattatttacccagtt 39593745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 69
Target Start/End: Complemental strand, 3913826 - 3913775
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaaggg 69  Q
    ||||||||||||||||||||||||   ||||||||||| |||||| ||||||    
T  3913826 taatctaggaatcaaagtgaaaagtataaaaccacaagtaaaagaaaaaggg 3913775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 31495209 - 31495271
Alignment:
Q  3 aacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 66  Q
    |||| ||||||||| ||||||||||| |||||||||||||  |||| |||||||| ||||||||    
T  31495209 aacagcacctagatctaatctaggaaacaaagtgaaaagcataaaa-cacaagcacaagataaa 31495271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 6766043 - 6766084
Alignment:
Q  53 aagcaaaagataaagggagaagagaaacaaacacaccaagaa 94  Q
    ||||||||||||| | |||||| |||||||||||||||||||    
T  6766043 aagcaaaagataatgtgagaagtgaaacaaacacaccaagaa 6766084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 3e-36; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31105298 - 31105406
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagataaagggagaagagaaacaaacacaccaagaaatgtt 99  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| |||||||||||||    
T  31105298 ataacaacaccaagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaaagataaggagagaagagaaacaaacagaccaagaaatgtt 31105397  T
Q  100 tatccagtt 108  Q
    || ||||||    
T  31105398 tacccagtt 31105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 41317340 - 41317430
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  41317340 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaggagaaacaaacacaccaa 41317430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 1113919 - 1113829
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||| ||||||||||| |||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1113919 ataataacacctagatctaatctaggaatcaaaatgaaaaacacaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 1113829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24525408 - 24525498
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24525408 ataacaacacctagatcaaatttagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 24525498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 36146314 - 36146404
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||| |||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  36146314 ataacaacatctagatctaatctagtaatcaaagtgaaaagctaaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 36146404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 8153604 - 8153514
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| | |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  8153604 ataacaacacctagatctgatctaataatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaataaacacaccaa 8153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 26417582 - 26417483
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    |||| |||||||||||||||||||    
T  26417582 ataacagcacctagatataatctatgaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaagaaat 26417483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31519157 - 31519058
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||        |||||||||||||||||  |||||||||||||||||||||||||||||||    
T  31519157 ataacaacacctagatctaatctaggaatcaaagtgaaaagc--------acaagcaaaagataaagaaagaagagaaacaaacacaccaagaaatgttt 31519066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 41648922 - 41649007
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  41648922 cacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 41649007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 12097790 - 12097863
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12097790 taatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 12097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 48489697 - 48489586
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg--gagaagaga--aacaaacacaccaagaaat 96  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||  |||||||||  ||||||||||||||  | |    
T  48489697 ataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggcgagaagagaggaacaaacacaccaaagatt 48489598  T
Q  97 gtttatccagtt 108  Q
    ||||| ||||||    
T  48489597 gtttacccagtt 48489586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 23344235 - 23344135
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    ||||||| |||||||||||||||| ||||||||||||||| | ||||||| |||| || |||||||| ||||||||||||| ||||||||||||||||||    
T  23344235 ataacaaaacctagatttaatctacgaatcaaagtgaaaaacacaaaaccgcaagaaagagataaagagagaagagaaacatacacaccaagaaatgttt 23344136  T
Q  101 a 101  Q
    |    
T  23344135 a 23344135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 18126912 - 18126841
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18126912 ataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggaga 18126841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23564967 - 23565064
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaa-ccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatg 97  Q
    ||||||| |||||||| |||||||| |||||||||||||| | ||||| ||||||||||||||||||  |||||||||||||||||||||||||||||    
T  23564967 ataacaaaacctagatctaatctagaaatcaaagtgaaaatcacaaaaaccacaagcaaaagataaatagagaagagaaacaaacacaccaagaaatg 23565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 1e-26
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43864510 - 43864417
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacacca 90  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||| |||||||||||||    
T  43864510 ataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacacca 43864417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14069735 - 14069806
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  14069735 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaagggaga 14069806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 14379763 - 14379834
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  14379763 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcacaagataaagggaga 14379834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 38671129 - 38671218
Alignment:
Q  4 acaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||    
T  38671129 acaacacctagatcaaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaggagagaagagagaaacaaacacaccaa 38671218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 47676038 - 47676149
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    |||| ||||||||||||||  | |    
T  47676038 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaatggagagaagagaggaacaaacacaccaaagatt 47676137  T
Q  97 gtttatccagtt 108  Q
    ||| ||||||||    
T  47676138 gttgatccagtt 47676149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 19502445 - 19502351
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| || |||||||||||    |||||||||||||||||||    
T  19502445 ataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcacaaaataaagggagagaagagagaaacaaacacaccaa 19502351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 47673846 - 47673940
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||  |||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  47673846 ataacaacacctagatctaatctagtaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 47673940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 12 - 108
Target Start/End: Original strand, 36574434 - 36574529
Alignment:
Q  12 tagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||| ||||||||||||||| ||||||| | |||||||||||| ||||||||||| ||||||| ||||||||||| ||||||||||||| ||||||    
T  36574434 tagatctaatctaggaatcaa-gtgaaaaacacaaaaccacaagaaaaagataaagagagaagaaaaacaaacacatcaagaaatgtttacccagtt 36574529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 4586427 - 4586356
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||||||||||||    
T  4586427 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaagggaga 4586356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25616121 - 25616026
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga-----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||| ||||     |||||||||||||||||||    
T  25616121 ataacaacacctagatctaatctaggaatcgaagtgaaaagcacaaaaccacaagcacaagataaagagagaagaagagagaaacaaacacaccaa 25616026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 495889 - 495979
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||||||||||||||||||    |||| ||||||||| |||||||| ||||| |||||||||||||||||    
T  495889 ataacaacacctagatctaatctaggaatcaaagtgaaaaatagaaaatcacaagcaagagataaagagagaaaagaaacaaacacaccaa 495979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 27348083 - 27347989
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| ||||    |||| ||||||||||||||    
T  27348083 ataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaagtgagagaagagaggaacaaacacaccaa 27347989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 48491842 - 48491754
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg--gagaagagaaacaaacaca 87  Q
    |||||||| ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||||||  |||||||| ||||||||||    
T  48491842 ataacaacgcctagatctaatataggaatcaaaatgaaaagcacaaaaccacaagcaaaagataaagggagagaagaggaacaaacaca 48491754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 23555307 - 23555217
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacaca 87  Q
    |||||||||||||||| |||||||||||||||||| |||| | ||| ||||||||||||||||||| |||||    |||||||||||||||    
T  23555307 ataacaacacctagatctaatctaggaatcaaagtaaaaaacacaataccacaagcaaaagataaaaggagagaagagagaaacaaacaca 23555217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29991319 - 29991226
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||| |||||||||||| ||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  29991319 ataacaacacctagatctaatataggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 29991226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 31732882 - 31732942
Alignment:
Q  12 tagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  31732882 tagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggaga 31732942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4179039 - 4178946
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||| | | ||||||||||||||| ||||| |||||    |||||||||||||||||||    
T  4179039 ataacagcacctagatctaatctaggaatcaaagtgaaaaacac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacacaccaa 4178946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 9 - 101
Target Start/End: Original strand, 4253443 - 4253534
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||| |||| ||| |||||| | ||||||  ||||| |||||||||| ||||||| | |||||||||||||||||||||||||||||||    
T  4253443 acctagatctaatatagaaatcaa-gcgaaaagtacaaaagcacaagcaaacgataaagagtgaagagaaacaaacacaccaagaaatgttta 4253534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 30024658 - 30024714
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagca 57  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||    
T  30024658 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagca 30024714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 39731637 - 39731567
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||| |||||||| |||||    
T  39731637 ataacaacacctagatctaatctaggaaacaaagtgaaaagcac-aaaccacaagcacaagataaaaggaga 39731567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 35854182 - 35854086
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagat-aaagggaga----agagaaacaaacacaccaaga 93  Q
    |||||| ||||||||| ||||||||||| |||||||||||||  |||| |||||||| ||||| |||||||||    |||||||||||||||||||||    
T  35854182 ataacagcacctagatctaatctaggaagcaaagtgaaaagcataaaa-cacaagcacaagataaaagggagagaagagagaaacaaacacaccaaga 35854086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 40808841 - 40808750
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||| ||||||||||||  ||| ||| ||| | ||||||||||||||||||||| || ||||| ||||||||||||||||| |||| ||||    
T  40808841 acctaggtttaatctaggacccaa-gtgtaaaacacaaaaccacaagcaaaagatatagagagaaaagaaacaaacacaccaaaaaatattta 40808750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 48409073 - 48408973
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagat-aaagggaga----agagaaacaaacacaccaagaa 94  Q
    |||||| ||||||||| ||||||||| ||||||||||||||| | ||| ||||||| ||||||| |||||||||    ||||||||||||||||||||||    
T  48409073 ataacagcacctagatctaatctaggtatcaaagtgaaaagcac-aaatcacaagcaaaaagataaaagggagagaagagagaaacaaacacaccaagaa 48408975  T
Q  95 at 96  Q
    ||    
T  48408974 at 48408973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 46 - 101
Target Start/End: Original strand, 3904418 - 3904473
Alignment:
Q  46 aaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||| ||||||||||||  | |||||||||||||| |||||||||||||||    
T  3904418 aaaccacaaccaaaagataaagatataagagaaacaaacataccaagaaatgttta 3904473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Complemental strand, 26639544 - 26639481
Alignment:
Q  45 aaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||||||||||||| ||||| || ||||||||||||| ||||||||| | |||| ||||||    
T  26639544 aaaaccacaagcaaaaggtaaagagataagagaaacaaacgcaccaagaattttttagccagtt 26639481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 72
Target Start/End: Original strand, 43504058 - 43504123
Alignment:
Q  6 aacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||| |||||| |||||||||||||||||||||||||  |||| |||||||| |||||||| |||||    
T  43504058 aacagctagatctaatctaggaatcaaagtgaaaagcataaaa-cacaagcacaagataaaaggaga 43504123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 29 - 91
Target Start/End: Original strand, 2759127 - 2759193
Alignment:
Q  29 tcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    ||||||| |||||| |||||||| ||||||||||||||||||||    ||||||| |||||||||||    
T  2759127 tcaaagttaaaagcacaaaaccataagcaaaagataaagggagagaagagagaaagaaacacaccaa 2759193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 25766859 - 25766956
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagat-aaagggaga----agagaaacaaacacaccaaga 93  Q
    |||||| ||||||||| ||||||||| ||||||||||||| | | ||| ||||||| ||||||| |||||||||    |||||||||||||||||||||    
T  25766859 ataacagcacctagatctaatctaggtatcaaagtgaaaaacac-aaatcacaagcaaaaagataaaagggagagaatagagaaacaaacacaccaaga 25766956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Complemental strand, 18396563 - 18396488
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaaca 85  Q
    |||||||||||||||||||| ||| |  |||| ||||||| |||||| | ||| ||||| |||||||||||||||||    
T  18396563 acctagatttaatctaggaaccaagggtaaaa-ctcaaaatcacaagtagaaggtaaagagagaagagaaacaaaca 18396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 28; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 108
Target Start/End: Original strand, 5513641 - 5513680
Alignment:
Q  69 gagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||||||||||||||  ||||||||||||| ||||||    
T  5513641 gagaagagaaacaaacacgtcaagaaatgtttacccagtt 5513680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 3e-36; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 3e-36
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 23555172 - 23555272
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||||    
T  23555172 ataacaacacctagatctaatttaggaatcatagtgaaaagctcaaaaccacaagcaaaacataaagagagaagagaaacaaacgcaccaagaaatgttt 23555271  T
Q  101 a 101  Q
    |    
T  23555272 a 23555272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 1e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 50169116 - 50169223
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||     
T  50169116 ataacaacacctatatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaaagattgttg 50169215  T
Q  101 atccagtt 108  Q
    ||||||||    
T  50169216 atccagtt 50169223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 40122102 - 40122192
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  40122102 ataacaacacctagatctaatttagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 40122192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 5e-35
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 50167081 - 50167171
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50167081 ataacaacacctagatctaatctagtaatcaaagtgaaaagttcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 50167171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-32
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13137882 - 13137968
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacaca 87  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  13137882 ataacaacacctagatctaatctagtaatcaaagtgaaaacctcaaaaccacaagcaaaagataaagagagaagagaaacaaacaca 13137968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-31
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 41361177 - 41361085
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaaga 93  Q
    ||||||||||||| || |||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  41361177 ataacaacacctatatctaatctaggaatcaaagtaaaaagctcaaaaccacaaacaaaagataaagtgagaaaagaaacaaacacaccaaga 41361085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28265460 - 28265550
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||| |||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  28265460 ataacaacatctagatctaatctagtaatcaaagtaaaaagctcaaaaccacaaccaaaagataaagagagaagagaaacaaacacaccaa 28265550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 45644260 - 45644350
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||||    
T  45644260 ataacaacatctagatctaatctagcaatcaaagtgaaaagctcaaaaccacaaacaaaagataaagagagaagagaaacaagcacaccaa 45644350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 834071 - 834163
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    ||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  834071 ataacaacaccaagatctaatctgggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 834163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 1e-29
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3847025 - 3847117
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  3847025 ataacaacacctagatctaatatagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 3847117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 5e-29
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 16455883 - 16455783
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    |||||||||  ||||| |||||| | |||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||    
T  16455883 ataacaacatatagatctaatctggtaatcaaagtgaaaaactcaaaaccacaagtaaaagataaagagagaagagaaacaaatacaccaagaaatgttt 16455784  T
Q  101 a 101  Q
    |    
T  16455783 a 16455783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 1833775 - 1833685
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||| ||||||||||||||||| ||||| | |||||||||||||||    
T  1833775 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaactacaagcaaaagataaagagagaaaataaacaaacacaccaa 1833685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 10925488 - 10925402
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacaca 87  Q
    |||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  10925488 ataacaacacctagatctaatctagtaatcaaagggaaaaactcaaaaccacaagcaaaagataaagagagaagataaacaaacaca 10925402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 927908 - 927989
Alignment:
Q  27 aatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||||    
T  927908 aatcaaagtgaaaagttcaaaaccacaaacaaaagataaagagagaagagaaacaaacacacaaagaaatgtttacccagtt 927989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 3e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3157131 - 3157037
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    |||| ||||||||||||||    
T  3157131 ataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaa 3157037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28220128 - 28220199
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  28220128 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaagggaga 28220199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 46065179 - 46065073
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    |||||||||||||||| |||||||  ||| || |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  | |||||    
T  46065179 ataacaacacctagatctaatctactaat-aatgtgaaaggctcaaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaaagattgttt 46065081  T
Q  101 atccagtt 108  Q
    | ||||||    
T  46065080 acccagtt 46065073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 196811 - 196920
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaagaaatgt 98  Q
    ||||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||  ||||||| |||||||||||  | |||    
T  196811 ataacaacacctacatctaatctagtaatcaaagtgagaagctcaaaaccacaagcaaaagataaagagagaagagagaaaaaaacacaccaaagattgt 196910  T
Q  99 ttatccagtt 108  Q
    | ||||||||    
T  196911 tgatccagtt 196920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13659243 - 13659332
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||| || |||||||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  13659243 ataacaacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaagagagaagagaaacaaatacaccaa 13659332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3189597 - 3189503
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    |||||||||||||||||||    
T  3189597 ataataacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 3189503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3198414 - 3198320
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    |||||||||||||||||||    
T  3198414 ataataacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 3198320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3207253 - 3207159
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||| ||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| |||||    |||||||||||||||||||    
T  3207253 ataataacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 3207159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4552550 - 4552616
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 67  Q
    |||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  4552550 ataacaacacatagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 4552616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 15820567 - 15820469
Alignment:
Q  3 aacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||||||||| |||| |||||||||||  |||||||||| || |||||||||  ||||| | ||||||||||||||||||||||| |||||||||    
T  15820567 aacaacacctagatctaatataggaatcaaatagaaaagctcataaacacaagcaatggataaggagagaagagaaacaaacacaccaataaatgttta 15820469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 5 - 91
Target Start/End: Original strand, 37503463 - 37503553
Alignment:
Q  5 caacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||| |||||||||||| |||||||||||| ||||||| |||||||||||||||||||||    |||| ||||||||||||||    
T  37503463 caacacctagatctaatctaggaattaaagtgaaaagcacaaaaccgcaagcaaaagataaagggagagaagagaggaacaaacacaccaa 37503553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 9 - 101
Target Start/End: Complemental strand, 5460160 - 5460069
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||  |||||||||| |||| || ||||| |||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  5460160 acctagatcgaatctaggaa-caaaatgtaaagcacaaaaccacaagcaaaagataaagagagaatagaaacaaacacaacaagaaatgttta 5460069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 7e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 44455426 - 44455332
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg--gagaagaga--aacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||| | |||||||| ||||||||||||||||  |||||||||  ||||||||||||||    
T  44455426 ataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccaaaagcaaaagataaaggaagagaagagaggaacaaacacaccaa 44455332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 28223323 - 28223394
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||| |||||||||||||| | ||||| |||||||||||||||||||||||    
T  28223323 ataacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaatcacaagcaaaagataaagggaga 28223394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 37559767 - 37559863
Alignment:
Q  1 ataacaacacctagatttaa-tctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagg---gagaagaga--aacaaacacaccaa 91  Q
    |||||| ||||||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||   |||||||||  ||||||||||||||    
T  37559767 ataacagcacctagatctaaatctaggaatcaaagtgaaaagcacaaaaccacaagcaaaagataaaggggagagaagagaggaacaaacacaccaa 37559863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 8550686 - 8550760
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaaga 75  Q
    |||||||||||||||| ||||||||||||||||||||||| | ||||| |||||||| ||||||||| |||||||    
T  8550686 ataacaacacctagatctaatctaggaatcaaagtgaaaaacacaaaatcacaagcacaagataaagagagaaga 8550760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 31659504 - 31659433
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||| ||| |||||||||||||||||| |||||| |||||||| |||||||||||||| |||||    
T  31659504 ataacaacaccttgatctaatctaggaatcaaagtaaaaagcacaaaaccataagcaaaagataaaaggaga 31659433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30476348 - 30476442
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||| ||||  |||||||  ||||||||||||||||||||||||||||| |||||||||| |||||    |||| ||||||||||||||    
T  30476348 ataacaacacttagacctaatctaataatcaaagtgaaaagctcaaaaccacaagtaaaagataaaaggagagaagagaggaacaaacacaccaa 30476442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 49918616 - 49918522
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| |||||| || |||||||||||||||| |||||||| |||| |||||||||||||||||| |||||    |||| ||||||||||||||    
T  49918616 ataacagcacctatatctaatctaggaatcaaaatgaaaagcacaaatccacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 49918522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 51765665 - 51765595
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||| |||||||| |||||    
T  51765665 ataacaacacctagatctaatctaggaaacaaagtgaaaagcac-aaaccacaagcacaagataaaaggaga 51765595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 3460915 - 3460858
Alignment:
Q  44 caaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||||| |||||||||||| |||||||||||||||||||  ||||||||||||    
T  3460915 caaaaccacaaacaaaagataaagagagaagagaaacaaacacattaagaaatgttta 3460858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20762934 - 20762845
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||     ||||||||| ||||||||||||||||||||||| |||||    |||||||||||||||||||    
T  20762934 ataacagcacctagatctaatctaggaa-----gtgaaaagcacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 20762845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 13316254 - 13316324
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||||||||| ||||||||||||||||||||||| | | ||||||||||||||| ||||| |||||    
T  13316254 ataacagcacctagatctaatctaggaatcaaagtgaaaaacac-aaaccacaagcaaaatataaaaggaga 13316324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 8870637 - 8870695
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaag 67  Q
    ||||||||  ||||||||||||||||||||||   ||||||||||||||||||||||||    
T  8870637 acctagatcaaatctaggaatcaaagtgaaaaatacaaaaccacaagcaaaagataaag 8870695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Original strand, 16914118 - 16914188
Alignment:
Q  38 aaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    ||||| ||||||| |||||||||||||||| ||||||||| ||||||||||  |||| |||||| ||||||    
T  16914118 aaagcacaaaaccgcaagcaaaagataaagagagaagagacacaaacacacatagaattgtttacccagtt 16914188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 36683892 - 36683842
Alignment:
Q  51 acaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||||||    
T  36683892 acaagcaaaagataaagagagaagacaaacaaacacaccaagagatgttta 36683842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 108
Target Start/End: Original strand, 37282605 - 37282704
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaa-gataaagggagaagagaaacaaacacaccaagaaatgtttatccagt 107  Q
    |||||||| |||||||| |||||  ||||||| | |||||||||||| |||| || |||  |||||||||||||||| |||||| ||||||||||| |||    
T  37282605 acctagatctaatctagaaatcag-gtgaaaaacgcaaaaccacaagaaaaaagagaaatagagaagagaaacaaacgcaccaaaaaatgtttatctagt 37282703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 2262898 - 2262979
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||| |||||||||| ||||||| | |||| |||||| |||||| ||||| ||||||| ||||||||| |||||||||||||||    
T  2262898 taatttaggaatcaa-gtgaaaaacccaaatccacaaacaaaag-taaagagagaagaaaaacaaacataccaagaaatgttta 2262979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 44646743 - 44646810
Alignment:
Q  31 aaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||||||| ||||| ||||||||||||||||||    ||||||||||||| |||||| |||| ||||    
T  44646743 aaagtgaaaagcacaaaatcacaagcaaaagataaag---aaagagaaacaaacgcaccaaaaaatattta 44646810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.0000000006
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 44650101 - 44650168
Alignment:
Q  31 aaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||||||| ||||| ||||||||||||||||||    ||||||||||||| |||||| |||| ||||    
T  44650101 aaagtgaaaagcacaaaatcacaagcaaaagataaag---aaagagaaacaaacgcaccaaaaaatattta 44650168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 2e-34; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 8565852 - 8565945
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagag-aaacaaacacaccaaga 93  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  8565852 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaaacaaacacaccaaga 8565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 538287 - 538180
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttt 100  Q
    ||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||  | ||||     
T  538287 ataacaacatctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagaaagaaacacaccaaagattgttg 538188  T
Q  101 atccagtt 108  Q
    ||||||||    
T  538187 atccagtt 538180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 3e-33
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 16649736 - 16649827
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaag 92  Q
    |||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  16649736 ataacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaagcaaaagataaacggaaaagagaaacaaacacaccaag 16649827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42927159 - 42927046
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagca------aaagataaagggagaagagaaacaaacacaccaagaa 94  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||      |||||||| | || |||||||||||||||||||||||    
T  42927159 ataacaacacctagatctaatctaggaatcaaagtgaaaaactcaaaaccacaagcaaaagcaaaagataaggagataagagaaacaaacacaccaagaa 42927060  T
Q  95 atgtttatccagtt 108  Q
    ||||||| ||||||    
T  42927059 atgtttacccagtt 42927046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16452345 - 16452235
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagc-aaaagataaagg--gagaagagaaacaaacacaccaagaaatg 97  Q
    |||||||||  ||||| |||||||||||||||| |||||||||||||||||||||| |||| |||||||  ||||||| |||||||||||||||||||||    
T  16452345 ataacaacagttagatctaatctaggaatcaaattgaaaagctcaaaaccacaagcaaaaaaataaaggaagagaagataaacaaacacaccaagaaatg 16452246  T
Q  98 tttatccagtt 108  Q
    |||| ||||||    
T  16452245 tttacccagtt 16452235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 42426137 - 42426208
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42426137 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 42426208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 42428332 - 42428403
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42428332 ataacaacacctagatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 42428403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 13240018 - 13239907
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    |||||||||||||||| |||||||| |||||||||||||| | ||||||||||||||||||||||| |||||    ||||||||||||||||||| || |    
T  13240018 ataacaacacctagatctaatctagtaatcaaagtgaaaaacacaaaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaaaaatt 13239919  T
Q  97 gtttatccagtt 108  Q
    ||| | ||||||    
T  13239918 gttcacccagtt 13239907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 19806629 - 19806558
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    ||||||||||||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  19806629 ataacaacacctaaatctaatctagtaatcaaagtgaaaagctaaaaaccacaagcaaaagataaagggaga 19806558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28750557 - 28750651
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||    |||| ||||||||||||||    
T  28750557 ataacaacacctagatctaatctagtaatccaagtgaaaagcacaaaaccacaagcaaaatataaagggagagaagagaggaacaaacacaccaa 28750651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30682825 - 30682919
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||||||||||||| |||||    |||| ||||||||||||||    
T  30682825 ataacaacacctagatctaatctaggaatcaaagtgaaaagcacaaattcacaagcaaaagataaaaggagagaagagaggaacaaacacaccaa 30682919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32637090 - 32636996
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggag----aagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||||||| |||||||||||||| ||||||| |||||||| |||||||||||||     |||||||||||||||||||    
T  32637090 ataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaatcacaagcacaagataaagggagggaagagagaaacaaacacaccaa 32636996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 37439408 - 37439314
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||| | |||||||| ||||||| |||||||| |||||||||||||| ||||||||||||||    |||||||||||||||||||    
T  37439408 ataacaacacctaggtctaatctagtaatcaaaatgaaaagcacaaaaccacaagcataagataaagggagagaagagagaaacaaacacaccaa 37439314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 3e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 31183240 - 31183126
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaag-----caaaagataaagggaga--agagaaacaaacacaccaaga 93  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||     |||||||||||| ||||  |||||||||||||||||||      
T  31183240 ataacaacacctatatctaatctagtaatcaaagtgaaaagctcaaaaccacaagcaattcaaaagataaagagagaagagagaaacaaacacaccaaag 31183141  T
Q  94 aatgtttatccagtt 108  Q
    |||||| | ||||||    
T  31183140 aatgttgacccagtt 31183126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 30182854 - 30182744
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    |||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||| |||||||| |||||    |||||||||||||||||||  | |    
T  30182854 ataacaacacctagatctaatctaggaaacaaagtgaaaagcacaaaa-cacaagcacaagataaaaggagagaagagagaaacaaacacaccaaagatt 30182756  T
Q  97 gtttatccagtt 108  Q
    ||| ||||||||    
T  30182755 gttcatccagtt 30182744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 534014 - 533941
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||  |||||||||| |||| |||||||    
T  534014 taatctagtaatcaaagtgaaaatctcaaaaccacaagcaaaagataaaaagagaagagaagcaaagacaccaa 533941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 13343326 - 13343237
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacaca 87  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||| ||||| |||||    |||||||||||||||    
T  13343326 ataacaacacctagatctaatctaggaatcaaagtgaaaagcac-aaaccacaagcaaaatataaaaggagagaagagagaaacaaacaca 13343237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 13488467 - 13488406
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaaga 62  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||    
T  13488467 ataacaacacctagatctaatctagtaatcaaagtgaaaaactcaaaaccacaagcaaaaga 13488406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 33831938 - 33831852
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaa-gctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    |||||| || ||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||  ||||||||||| |||||||    
T  33831938 cacctaaatctaatctaggaatcaaagtgaaaaagctcaaagccacaagcaaaagataaagagagaagagagaaacaaaaacaccaa 33831852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 7e-19
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39468451 - 39468522
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||||||||| |||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||    
T  39468451 ataacagcacctagatctaatctagaaatcaaagtgaaaagcacaaaaccacgagcacaagataaagggaga 39468522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 36073945 - 36074055
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    |||||| ||||||||| ||||||||||||||||||||||||| | ||| ||||||||||| ||||| |||||    |||||||||||||||||||  | |    
T  36073945 ataacagcacctagatctaatctaggaatcaaagtgaaaagcac-aaatcacaagcaaaacataaaaggagagaagagagaaacaaacacaccaaagatt 36074043  T
Q  97 gtttatccagtt 108  Q
    ||| ||||||||    
T  36074044 gttcatccagtt 36074055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 13695639 - 13695696
Alignment:
Q  44 caaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  13695639 caaaacaacaagcaaaggataaagagagaagagaaacaaacacaccaagaaatgttta 13695696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 25413026 - 25412933
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| |||||| || ||||||||||||||||| ||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  25413026 ataacagcacctatatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 25412933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 4e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5887336 - 5887430
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccac--aagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    ||||||||||||| || |||||||| ||||||| |||||| || ||||||||  ||||||||||||||| ||||  |||||||||||||||||||    
T  5887336 ataacaacacctaaatctaatctagtaatcaaaatgaaaaacttaaaaccacaaaagcaaaagataaagagagaagagagaaacaaacacaccaa 5887430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 26178152 - 26178082
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||| |||||||| |||||||| |||||    
T  26178152 ataacaacacctagatctaatctaggaatcaaagtgaaaagcataaaa-cacaagcacaagataaaaggaga 26178082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 16409745 - 16409675
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| |||||||||||||  |||| |||||||| |||||||| |||||    
T  16409745 ataacaacacctagatctaatctaggaaacaaagtgaaaagcataaaa-cacaagcacaagataaaaggaga 16409675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 26171032 - 26170962
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| |||||||||||||||| ||||||||  |||| |||||||| |||||||| |||||    
T  26171032 ataacaacacctagatctaatctaggaatcaaaatgaaaagcataaaa-cacaagcacaagataaaaggaga 26170962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 30897657 - 30897575
Alignment:
Q  18 taatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||||| ||| ||| |||||  |||| ||||||||||||||| || || || |||||||||||||||||||||||||||    
T  30897657 taatctaggaaccaa-gtgtaaagcataaaatcacaagcaaaagatagagagaaaacagaaacaaacacaccaagaaatgttta 30897575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 9049285 - 9049352
Alignment:
Q  32 aagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatcca 105  Q
    ||||||||| | |||||||||||||||||||||      ||||||||||||||||||||| |||||||||||||    
T  9049285 aagtgaaaaacacaaaaccacaagcaaaagata------gaagagaaacaaacacaccaaaaaatgtttatcca 9049352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 101
Target Start/End: Complemental strand, 30793340 - 30793298
Alignment:
Q  59 aagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    ||||||||| ||| |||||||||||||||||||||||||||||    
T  30793340 aagataaagagagtagagaaacaaacacaccaagaaatgttta 30793298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 93
Target Start/End: Complemental strand, 9299797 - 9299754
Alignment:
Q  50 cacaagcaaaagataaagggagaagagaaacaaacacaccaaga 93  Q
    |||||||||||||||||| ||||||||||| || ||||||||||    
T  9299797 cacaagcaaaagataaagagagaagagaaataagcacaccaaga 9299754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 99
Target Start/End: Original strand, 3075632 - 3075662
Alignment:
Q  69 gagaagagaaacaaacacaccaagaaatgtt 99  Q
    |||||||||||||||||||||||||||||||    
T  3075632 gagaagagaaacaaacacaccaagaaatgtt 3075662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 8e-34; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 8e-34
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 14521585 - 14521677
Alignment:
Q  3 aacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaa 95  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||| |||||||||||||||    
T  14521585 aacaacacctagatctaatctaggaatcaaagtgaaaagctcaaaaccacaagcataagataaagtgagaaaagaaataaacacaccaagaaa 14521677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3038829 - 3038919
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||||||||||||| |||| ||| ||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  3038829 ataacaacacctagatctaatatagtaatcaaagtgaaaagttcaaaaccacaagcaaaagataaagagagaaaagaaacaaacacaccaa 3038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 3e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33211091 - 33211181
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||| ||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||| |||||    
T  33211091 ataataacacctagatctaatctaggaatcaaagtgaaaatcacaaaaccacaagcaaaagataaagagagaagagaaacaaacataccaa 33211181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 16569279 - 16569194
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga--agagaaacaaacacaccaa 91  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||||||||    
T  16569279 cacctagatctaatctagaaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagagagaagagagaaacaaacacaccaa 16569194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 5e-26
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 9182933 - 9183004
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  9182933 ataacaacacctagatctaatctaggaatcaaagtgaaaagtacaaaaccacaagcaaaagataaagggaga 9183004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 8e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28137312 - 28137412
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaa--caaacacaccaagaaatgt 98  Q
    |||||||||| ||||| |||| |||||||||||||||||||| || ||||||||||||||||||||||||||||| |||   ||||| ||||||||||||    
T  28137312 ataacaacacatagatctaatataggaatcaaagtgaaaagcacataaccacaagcaaaagataaagggagaagataaaacaaaacataccaagaaatgt 28137411  T
Q  99 t 99  Q
    |    
T  28137412 t 28137412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 5e-23
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26954192 - 26954274
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaa 83  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||  ||||| |||||||||||||||    
T  26954192 ataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaaccacaagaaaaatgtaaagagagaagagaaacaaa 26954274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5408972 - 5409065
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  5408972 ataacaacacctagatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 5409065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5413297 - 5413390
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  5413297 ataacaacacctagatctaatctaggaatcaaagagaaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 5413390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 33160253 - 33160347
Alignment:
Q  2 taacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagat-aaagggaga----agagaaacaaacacaccaa 91  Q
    ||||||||||||||| |||||||| |||||||||||||||| ||||||||||| |||||||| ||| |||||    |||||||||||||||||||    
T  33160253 taacaacacctagatctaatctagtaatcaaagtgaaaagcacaaaaccacaaacaaaagataaaaaggagagaagagagaaacaaacacaccaa 33160347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 9 - 97
Target Start/End: Complemental strand, 4045671 - 4045584
Alignment:
Q  9 acctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatg 97  Q
    |||||||| ||||||| ||||||| |||||||   ||||||||| || ||||||||||| |||||||||||||||||||||||||||||    
T  4045671 acctagatctaatctaagaatcaa-gtgaaaaaaacaaaaccacgagtaaaagataaagagagaagagaaacaaacacaccaagaaatg 4045584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 31404577 - 31404670
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||| | ||||| | ||||||||||||||||||||| |||||    |||||||||||||||||||    
T  31404577 ataacagcacctagatctaatctaggaatcaaagaggaaagcac-aaaccacaagcaaaagataaaaggagagaagagagaaacaaacacaccaa 31404670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 5406109 - 5406195
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    ||||||||| ||||||||||||||||| ||||||| | ||||||||| ||||||||||| |||||    |||||||||||||||||||    
T  5406109 cacctagatctaatctaggaatcaaagagaaaagcac-aaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaa 5406195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 5410434 - 5410520
Alignment:
Q  8 cacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    ||||||||| ||||||||||||||||| ||||||| | ||||||||| ||||||||||| |||||    |||||||||||||||||||    
T  5410434 cacctagatctaatctaggaatcaaagagaaaagcac-aaaccacaaacaaaagataaaaggagagaagagagaaacaaacacaccaa 5410520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 7e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 16452230 - 16452324
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaag-ataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| |||| ||||||||||||  ||||| |||||    |||||||||||||||||||    
T  16452230 ataacatcacctagatctaatctaggaatcaaagtgaaaagcacaaa-ccacaagcaaaaatataaaaggagagaagagagaaacaaacacaccaa 16452324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 12221048 - 12221117
Alignment:
Q  39 aagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgtttatccagtt 108  Q
    |||| |||||| ||| |||||||||||||  | |||||||| ||||||||||||||||||||| ||||||    
T  12221048 aagcacaaaactacacgcaaaagataaagatataagagaaataaacacaccaagaaatgtttacccagtt 12221117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 30834436 - 30834531
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctca-aaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||| |||||||||||||||   || ||||||||||||||| ||||| |||||    ||| |||||||||||||||    
T  30834436 ataacagcacctagatctaatctatgaatcaaagtgaaaaaaacacaaaccacaagcaaaatataaaaggagagaagagataaacaaacacaccaa 30834531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2171429 - 2171468
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaa 40  Q
    |||||| ||||||||| |||||||||||||||||||||||    
T  2171429 ataacagcacctagatctaatctaggaatcaaagtgaaaa 2171468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1668 (Bit Score: 63; Significance: 8e-28; HSPs: 1)
Name: scaffold1668
Description:

Target: scaffold1668; HSP #1
Raw Score: 63; E-Value: 8e-28
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1404 - 1494
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    |||||| ||||||||| |||||||||||| |||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  1404 ataacagcacctagatctaatctaggaattaaagtgaaaaacataaaaccacaagcaaaagataaagagagaagagaaacaaacacaccaa 1494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20317 - 20428
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    |||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||||||||    |||| |||||||||||||| || |    
T  20317 ataacagcacctagatctaatctaggaatcaaagtgaaaaacacaaaaccacaagcaaaagataaagggagagaagagaggaacaaacacaccaaaaatt 20416  T
Q  97 gtttatccagtt 108  Q
    ||| | ||||||    
T  20417 gttgacccagtt 20428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 59; Significance: 2e-25; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 59; E-Value: 2e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 149004 - 149093
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaa 91  Q
    ||||||||||||| || |||||||||||||||| |||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||    
T  149004 ataacaacacctaaatctaatctaggaatcaaa-tgaaaagtacaaaaccacaagcaaaagataaagagagaagagaaacaaatacaccaa 149093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 1e-20; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 1e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 114869 - 114758
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga----agagaaacaaacacaccaagaaat 96  Q
    ||||||||||||| || ||||||||||||||||||||||||| |||||| ||||| |||||||||| |||||    |||||||||| ||||||||  | |    
T  114869 ataacaacacctatatctaatctaggaatcaaagtgaaaagcacaaaacaacaagaaaaagataaaaggagagaagagagaaacaagcacaccaaagatt 114770  T
Q  97 gtttatccagtt 108  Q
    ||| ||||||||    
T  114769 gttcatccagtt 114758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 19 - 101
Target Start/End: Original strand, 27366 - 27447
Alignment:
Q  19 aatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggagaagagaaacaaacacaccaagaaatgttta 101  Q
    |||||||||||||| ||||||| | |||||||||||||||||| ||||| ||||||||||| ||||||| ||| |||||||||    
T  27366 aatctaggaatcaa-gtgaaaaacacaaaaccacaagcaaaaggtaaagagagaagagaaataaacacatcaataaatgttta 27447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 47; Significance: 3e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 47; E-Value: 3e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 434800 - 434706
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagat-aaagggaga----agagaaacaaacacaccaa 91  Q
    |||||| ||||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||    |||||||||||||||||||    
T  434800 ataacagcacctagatctaatctaggaatcaaagtgaaaagcacaaaa-cacaagcacaagataaaagggagagaagagagaaacaaacacaccaa 434706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 42; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 8635 - 8699
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaa 66  Q
    |||||||||||||||| ||||||||||| ||||||||||||| | |||||||||||| ||||||||    
T  8635 ataacaacacctagatctaatctaggaaacaaagtgaaaagcac-aaaccacaagcacaagataaa 8699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 40; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 11061 - 11131
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||||||||||||| ||||||||||| ||||||||||| | | |||||||||||| |||||||| |||||    
T  11061 ataacaacacctagatctaatctaggaaacaaagtgaaaaacac-aaaccacaagcacaagataaaaggaga 11131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 36; Significance: 0.00000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1182 - 1112
Alignment:
Q  1 ataacaacacctagatttaatctaggaatcaaagtgaaaagctcaaaaccacaagcaaaagataaagggaga 72  Q
    |||||| ||||||||| ||||||||| ||||||||||||||| | ||||||||||||||  ||||| |||||    
T  1182 ataacaccacctagatctaatctaggtatcaaagtgaaaagcac-aaaccacaagcaaagtataaaaggaga 1112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University