View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4255_high_2 (Length: 644)
Name: NF4255_high_2
Description: NF4255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4255_high_2 |
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Alignment Details
Target: chr8 (Bit Score: 586; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 586; E-Value: 0
Query Start/End: Original strand, 17 - 634
Target Start/End: Original strand, 8804885 - 8805502
Alignment:
| Q |
17 |
acattcttagaatcaggagacaaagatatcatttgaagaagactagaatttgagaatgtttcttcaagaacaattcctttcacatttcctccatcaacac |
116 |
Q |
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| T |
8804885 |
acattcatagaatcaggagacaaagatatcatttgaagaagactagaatttgagaatgtttcttcaagagcaattcctttcacatttcctccatcaacac |
8804984 |
T |
|
| Q |
117 |
tatcttttgtcaaatgaaccaattccctagcaacatcaatcattcccatctttccatctccactaaacagaaaacatcttgtggcaaggtcagcaatgat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8804985 |
tatcttttgtcaaatgaaccaattccctagcaacatcaatcattcccatctttccatctccactaaacagaaaacatcttgtggcaaggtcagcaatgat |
8805084 |
T |
|
| Q |
217 |
ctgaatctgttcttgacaatgactcggttgttcgtaataattaagaagtggatcgacaatttcttcgatctttccatccctaattttcttcaaggctaat |
316 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8805085 |
ctgaatctgttcttgacaatgacgcggttgttcgtaataattaagaagtggatcgacaatttcttcgatctttccatccctaattttcttcaaggctaat |
8805184 |
T |
|
| Q |
317 |
gtaggtgagtccaactgatttgttccgtagataatctcgagtagcaacaaacctatgtcatagacatcatttttgcacaaccgaaagcgttcgcgagttt |
416 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| |||||||||||| |
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| T |
8805185 |
gtaggtgagtccaattgatttgttccgtagataatctcgagtagcaacaaacctatgtcgtagacatcatttttgcacaagcgaaagtgttcgcgagttt |
8805284 |
T |
|
| Q |
417 |
cacaattcttgtaatcataattattaacatcagaattatgtattccaaatcctgcaatcttgacagaaaaatcatcacctaggaagatgcaactagactt |
516 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8805285 |
cacaattcttgtaatcataattattaacatcagaattatgtattccaaatcctgcaatcttgacagaaaaatcatcacctaggaagatgcaactagactt |
8805384 |
T |
|
| Q |
517 |
taggttatgatggaatattggaggagatttatcataatgtaacgatgcaatagtactagctatttctgttgcaatattcaatctcctataccaatgtaaa |
616 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8805385 |
taggttatgatggaatattggaggagatttatcataatgtaacaatgcaatagtactagctatttctgttgcaatattcaatctcctataccaatgtaaa |
8805484 |
T |
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| Q |
617 |
ccaagcttttgtcctatg |
634 |
Q |
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|||||||||||||||||| |
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| T |
8805485 |
ccaagcttttgtcctatg |
8805502 |
T |
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