View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4255_high_4 (Length: 557)

Name: NF4255_high_4
Description: NF4255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4255_high_4
NF4255_high_4
[»] chr5 (22 HSPs)
chr5 (209-546)||(34541682-34542020)
chr5 (18-209)||(30041349-30041540)
chr5 (18-208)||(34357393-34357583)
chr5 (18-208)||(34359184-34359374)
chr5 (18-197)||(29980397-29980576)
chr5 (18-208)||(40958722-40958912)
chr5 (18-212)||(25894754-25894949)
chr5 (18-208)||(2957785-2957976)
chr5 (18-208)||(2966254-2966445)
chr5 (18-208)||(42150745-42150936)
chr5 (18-208)||(5876145-5876335)
chr5 (18-208)||(22359891-22360081)
chr5 (18-208)||(22313757-22313947)
chr5 (18-198)||(4973500-4973680)
chr5 (18-198)||(2438738-2438918)
chr5 (71-198)||(9843286-9843413)
chr5 (20-209)||(29414776-29414965)
chr5 (76-208)||(2156283-2156413)
chr5 (35-208)||(33794019-33794191)
chr5 (18-169)||(12505870-12506029)
chr5 (141-208)||(40821562-40821629)
chr5 (143-171)||(34738161-34738189)
[»] chr7 (34 HSPs)
chr7 (18-208)||(5050017-5050207)
chr7 (18-208)||(36875472-36875662)
chr7 (18-208)||(2446573-2446763)
chr7 (18-210)||(1378872-1379064)
chr7 (18-208)||(23612316-23612506)
chr7 (18-206)||(3924198-3924386)
chr7 (18-208)||(8142551-8142741)
chr7 (18-205)||(14287644-14287832)
chr7 (18-208)||(14298826-14299017)
chr7 (18-208)||(6795365-6795555)
chr7 (18-209)||(6020969-6021161)
chr7 (18-208)||(5056412-5056603)
chr7 (18-208)||(15914565-15914755)
chr7 (18-210)||(1948738-1948931)
chr7 (20-208)||(26601839-26602027)
chr7 (18-208)||(48347201-48347392)
chr7 (18-208)||(48353585-48353776)
chr7 (18-208)||(15949086-15949276)
chr7 (18-208)||(21642449-21642635)
chr7 (18-198)||(8185497-8185678)
chr7 (18-198)||(8193057-8193238)
chr7 (18-208)||(19089734-19089925)
chr7 (18-208)||(37025975-37026165)
chr7 (18-208)||(9643021-9643214)
chr7 (18-208)||(39432835-39433024)
chr7 (35-200)||(10831248-10831413)
chr7 (35-200)||(11025040-11025205)
chr7 (18-208)||(45433512-45433703)
chr7 (35-192)||(21901311-21901469)
chr7 (18-208)||(33850748-33850938)
chr7 (85-208)||(1941972-1942095)
chr7 (141-212)||(28442368-28442440)
chr7 (151-208)||(41455155-41455212)
chr7 (141-208)||(41542386-41542453)
[»] chr6 (28 HSPs)
chr6 (18-208)||(32328598-32328788)
chr6 (18-208)||(34711662-34711852)
chr6 (18-209)||(11058255-11058446)
chr6 (18-210)||(1428528-1428720)
chr6 (18-208)||(4186612-4186802)
chr6 (18-208)||(9864865-9865056)
chr6 (18-208)||(4020340-4020531)
chr6 (18-208)||(4026766-4026957)
chr6 (18-208)||(7062588-7062779)
chr6 (18-208)||(34655177-34655368)
chr6 (18-208)||(34648726-34648917)
chr6 (18-209)||(4738428-4738620)
chr6 (18-208)||(21262679-21262870)
chr6 (18-197)||(31547833-31548012)
chr6 (18-208)||(30117373-30117563)
chr6 (18-208)||(29906817-29907007)
chr6 (18-208)||(7069807-7069995)
chr6 (18-208)||(13671922-13672112)
chr6 (18-208)||(27670021-27670211)
chr6 (103-173)||(1167685-1167755)
chr6 (154-208)||(1461190-1461244)
chr6 (141-208)||(7825914-7825981)
chr6 (141-208)||(10800803-10800870)
chr6 (141-208)||(24908347-24908414)
chr6 (141-208)||(14118790-14118857)
chr6 (140-173)||(11015215-11015248)
chr6 (35-112)||(10081685-10081762)
chr6 (20-56)||(1167594-1167630)
[»] chr3 (27 HSPs)
chr3 (18-208)||(32746297-32746487)
chr3 (18-208)||(6036193-6036383)
chr3 (18-208)||(13014913-13015103)
chr3 (18-210)||(25893155-25893348)
chr3 (20-208)||(9570655-9570845)
chr3 (20-208)||(9577157-9577347)
chr3 (18-208)||(24179001-24179191)
chr3 (18-198)||(27502072-27502253)
chr3 (18-209)||(4311591-4311782)
chr3 (18-208)||(41353788-41353978)
chr3 (18-208)||(43931509-43931699)
chr3 (18-208)||(10941409-10941599)
chr3 (18-208)||(41354175-41354365)
chr3 (18-208)||(23068391-23068582)
chr3 (35-208)||(4590721-4590894)
chr3 (18-205)||(43994997-43995194)
chr3 (102-208)||(18341481-18341587)
chr3 (73-208)||(3577098-3577233)
chr3 (83-208)||(20651301-20651429)
chr3 (100-169)||(20952950-20953019)
chr3 (141-209)||(4674853-4674921)
chr3 (141-208)||(18866705-18866772)
chr3 (102-180)||(2785661-2785741)
chr3 (141-208)||(24899303-24899371)
chr3 (141-208)||(24905769-24905837)
chr3 (146-208)||(17735310-17735373)
chr3 (146-208)||(19036579-19036642)
[»] chr4 (17 HSPs)
chr4 (18-208)||(30238187-30238377)
chr4 (18-208)||(55462877-55463067)
chr4 (18-208)||(41372913-41373104)
chr4 (18-211)||(27590229-27590422)
chr4 (18-210)||(37368419-37368612)
chr4 (18-209)||(8103807-8103999)
chr4 (18-208)||(17456781-17456972)
chr4 (18-208)||(7780334-7780524)
chr4 (18-208)||(16405269-16405459)
chr4 (39-208)||(48914826-48914996)
chr4 (18-208)||(13594032-13594225)
chr4 (71-208)||(2947772-2947909)
chr4 (23-208)||(36754901-36755094)
chr4 (18-208)||(16838464-16838654)
chr4 (18-209)||(30211641-30211823)
chr4 (35-208)||(13003909-13004082)
chr4 (18-209)||(5660654-5660850)
[»] chr2 (32 HSPs)
chr2 (18-208)||(34834917-34835107)
chr2 (18-208)||(34841361-34841551)
chr2 (18-208)||(2157539-2157729)
chr2 (18-208)||(42931477-42931667)
chr2 (18-209)||(21332099-21332290)
chr2 (18-208)||(13902062-13902252)
chr2 (18-211)||(43267782-43267976)
chr2 (18-209)||(36782289-36782481)
chr2 (18-209)||(21341987-21342178)
chr2 (18-208)||(2163955-2164145)
chr2 (18-208)||(12950723-12950913)
chr2 (18-209)||(15852475-15852667)
chr2 (18-210)||(45011907-45012100)
chr2 (18-209)||(29484852-29485044)
chr2 (18-210)||(2021553-2021745)
chr2 (18-210)||(16856592-16856783)
chr2 (18-210)||(16817435-16817626)
chr2 (18-209)||(21068063-21068253)
chr2 (35-206)||(41455535-41455705)
chr2 (106-208)||(36838070-36838172)
chr2 (141-216)||(33033670-33033745)
chr2 (141-208)||(44611169-44611236)
chr2 (106-171)||(45700843-45700908)
chr2 (103-171)||(11910150-11910218)
chr2 (141-208)||(43669693-43669760)
chr2 (18-62)||(11910057-11910101)
chr2 (140-206)||(13162737-13162804)
chr2 (140-208)||(17784674-17784744)
chr2 (18-78)||(13162874-13162934)
chr2 (140-173)||(24853210-24853243)
chr2 (140-173)||(37439718-37439751)
chr2 (18-71)||(45700749-45700802)
[»] chr1 (31 HSPs)
chr1 (18-208)||(6238582-6238772)
chr1 (18-208)||(45015708-45015898)
chr1 (18-210)||(42091821-42092013)
chr1 (18-211)||(39059815-39060008)
chr1 (18-208)||(39053443-39053633)
chr1 (18-208)||(4599455-4599646)
chr1 (18-208)||(23764537-23764727)
chr1 (18-211)||(27240235-27240429)
chr1 (18-208)||(29001658-29001848)
chr1 (18-209)||(43686553-43686746)
chr1 (21-208)||(26621396-26621584)
chr1 (18-198)||(41305619-41305800)
chr1 (18-209)||(1174531-1174723)
chr1 (18-208)||(41297443-41297634)
chr1 (18-208)||(31072245-31072435)
chr1 (18-198)||(41299293-41299474)
chr1 (76-208)||(2824982-2825114)
chr1 (35-211)||(28413796-28413972)
chr1 (18-209)||(9869031-9869222)
chr1 (18-208)||(11913367-11913556)
chr1 (18-208)||(44241284-44241474)
chr1 (18-205)||(5445069-5445255)
chr1 (20-200)||(44916265-44916453)
chr1 (18-212)||(1116090-1116282)
chr1 (66-200)||(32797671-32797804)
chr1 (35-206)||(38672889-38673061)
chr1 (35-208)||(39805984-39806156)
chr1 (83-169)||(23251309-23251396)
chr1 (153-208)||(27041109-27041164)
chr1 (103-171)||(5357943-5358011)
chr1 (83-169)||(47646626-47646713)
[»] scaffold0043 (1 HSPs)
scaffold0043 (18-210)||(5110-5302)
[»] chr8 (19 HSPs)
chr8 (18-209)||(36005587-36005778)
chr8 (18-208)||(7311276-7311466)
chr8 (18-210)||(6464681-6464873)
chr8 (18-208)||(8013425-8013615)
chr8 (18-209)||(36075893-36076084)
chr8 (18-208)||(41242221-41242411)
chr8 (18-209)||(36021904-36022096)
chr8 (18-208)||(11358298-11358489)
chr8 (18-208)||(12768671-12768861)
chr8 (18-210)||(36425835-36426028)
chr8 (18-208)||(1238140-1238331)
chr8 (18-209)||(16710773-16710965)
chr8 (18-209)||(15012314-15012505)
chr8 (71-209)||(7934084-7934223)
chr8 (59-208)||(31017326-31017475)
chr8 (103-169)||(14393700-14393766)
chr8 (18-106)||(45068521-45068609)
chr8 (18-59)||(26250696-26250737)
chr8 (141-208)||(12538883-12538951)
[»] scaffold0053 (2 HSPs)
scaffold0053 (18-208)||(49618-49807)
scaffold0053 (140-208)||(55599-55667)
[»] scaffold0510 (2 HSPs)
scaffold0510 (18-208)||(8986-9177)
scaffold0510 (18-198)||(2665-2846)
[»] scaffold0060 (1 HSPs)
scaffold0060 (18-209)||(15097-15288)
[»] scaffold0002 (1 HSPs)
scaffold0002 (29-208)||(99841-100020)
[»] scaffold0343 (1 HSPs)
scaffold0343 (18-206)||(2574-2762)
[»] scaffold0936 (1 HSPs)
scaffold0936 (18-208)||(3369-3558)
[»] scaffold0513 (2 HSPs)
scaffold0513 (73-208)||(11877-12013)
scaffold0513 (18-54)||(12014-12050)
[»] scaffold0173 (1 HSPs)
scaffold0173 (35-208)||(24368-24541)
[»] scaffold0744 (1 HSPs)
scaffold0744 (133-208)||(6912-6987)
[»] scaffold0045 (2 HSPs)
scaffold0045 (141-208)||(2973-3040)
scaffold0045 (141-208)||(9355-9422)


Alignment Details
Target: chr5 (Bit Score: 238; Significance: 1e-131; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 209 - 546
Target Start/End: Original strand, 34541682 - 34542020
Alignment:
Q  209 gttttgcaataaaattttggtagttatgaaagacaattgtgatactactactatgtaacgcatcaatatcnnnnnnnnnnnnnnnnnnnctagataaata 308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||                   ||| ||||  |    
T  34541682 gttttgcaataaaattttggtagttatgaaagacaattgtgatactactactaggtaacacatcaatatcgaaaactaaaaaataaaaactaaataagga 34541781  T
Q  309 t-cggtcaaaattgtacaaacatgagcaaactcatttgttcgtcttctaataaatttaccttaaaagtttctaaaatgaattgaaaatacacctacaagc 407  Q
    | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  34541782 tgcggtcaaaattgtacgaacatgagcaaactcatttgttcgtcttctaataaatttaccataaaagtttctaaaatgaattgaaaatacacctagaagc 34541881  T
Q  408 accaatgataccacctaattcacaaacacctacttcttgctataaaatttatcaaccactcgtttagaatcacaagttcaaaatctacgttattcaattg 507  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34541882 actaatgataccacctaattcacaaacacctacttcttgctataaaatttatcaaccactcgtttagaatcacaagttcaaaatctacgttattcaattg 34541981  T
Q  508 caaatcccgtacccattttaaagcaagaatgagtcctat 546  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34541982 caaatcccgtacccattttaaagcaagaatgagtcctat 34542020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 30041349 - 30041540
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  30041349 actctaatcctaacaagttttacgccctattaatctcaattgtatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 30041448  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30041449 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 30041540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 34357393 - 34357583
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  34357393 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 34357492  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  34357493 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 34357583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 34359184 - 34359374
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  34359184 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 34359283  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  34359284 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 34359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 29980576 - 29980397
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  29980576 actctaatcctaacaagttttacgccctattaatctcaattgtatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 29980477  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaa 197  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29980476 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaa 29980397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 40958722 - 40958912
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||| ||||||    
T  40958722 actctaatcctaacaagtgttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaataaccaattatcttttaacttggaatga 40958821  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||| |||||||    
T  40958822 tatttggtgtcgaacggtccgcgatatcgcactagtccccgaggagacgatataaatacttataattgtttgatgcaataatactacatca 40958912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 25894754 - 25894949
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  25894754 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 25894853  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagttt 212  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25894854 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagttt 25894949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 2957976 - 2957785
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  2957976 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 2957877  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  2957876 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatactacatca 2957785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 2966445 - 2966254
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  2966445 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 2966346  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  2966345 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatactacatca 2966254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 42150936 - 42150745
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaa-ctatcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | || ||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  42150936 actctaatcctaacaagttttacgccctattactctcaacttttactttagcaatttagttactaaaacaaacaaacaaactatctttcaacttagaatg 42150837  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42150836 atatttggagtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 42150745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 5876335 - 5876145
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  5876335 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatga 5876236  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||| ||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  5876235 tatttggtgttgaacggttcgcgatatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatactacatca 5876145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 22360081 - 22359891
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| ||||||||||||| |    
T  22360081 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaataa 22359982  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  22359981 tatttggtgtcgaacggtccgcgatatcacactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatactacatca 22359891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 22313947 - 22313757
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||| ||  || |||| |||||||||||||||    
T  22313947 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaataacaaattatcgtttaacttagaatga 22313848  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||| |||||||    
T  22313847 tatttggtgtcgaacggtccgcaatatcgcactagtccctaaggagacgatacaaatacttacaattgtttgattcaaaaatactacatca 22313757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 4973680 - 4973500
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||| |||||||||||||| || || ||||||||||||||||||||||||||| ||||||| ||||||||||||  || |||| |||||||||||||||    
T  4973680 actctgatcctaacaagtttcaccccttattaatctcaattttatcatttgcaacttagttattaaaacaaacaacaaattatcgtttaacttagaatga 4973581  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
    |||||||||||||| |||  | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4973580 tatttggtgtcgaacggtttgtgatatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaa 4973500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 2438918 - 2438738
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| ||||||||||| |||||| ||| |||| ||||||||||||||||||||  || | |||||||||||| |||||    
T  2438918 actctaatcctaacaagtttcacgccttattaatctcacttttattattcgcaacttagttactaaaacaaacaacaaattttcttttaacttataatga 2438819  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
    | |||||| ||| | |||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2438818 tttttggtatcggacggtctgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaa 2438738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 71 - 198
Target Start/End: Complemental strand, 9843413 - 9843286
Alignment:
Q  71 atttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatat 170  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  9843413 atttggttactaaaacaaacaatcaactatcgtttaacttagaatgatatttggtgtcgaacggtccgcaatatcgcactagtccctgaggagacgatat 9843314  T
Q  171 aaatacttacaattgtttgatgcaaaaa 198  Q
    |||||||||| |||||||||||||||||    
T  9843313 aaatacttactattgtttgatgcaaaaa 9843286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 29414776 - 29414965
Alignment:
Q  20 tctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatgat 118  Q
    ||||||||||| |||||||||||||||||| |||| | |||   ||||   ||||  |||||||||||||||| ||| | ||||||||||||||||||||    
T  29414776 tctaatcctaataagttttacgccctattactctcgactttca-attttatatttgcttactaaaacaaacaaacaaattatcttttaacttagaatgat 29414874  T
Q  119 atttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  29414875 atttggtgttgaacggtccgcgatatcgcactagtccctaaggagacgatacaaatacttacaattgtttgatgcaaaaatactacatcag 29414965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 76 - 208
Target Start/End: Original strand, 2156283 - 2156413
Alignment:
Q  76 gttactaaaacaaacaatcaactatcttttaa-cttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaat 174  Q
    |||||||||||||||||   | |||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||    
T  2156283 gttactaaaacaaacaa---attatcttttaaacttagaatgatatttggtgtcgaacggtccgcgatatcacactagtccctgaggagacgatataaat 2156379  T
Q  175 acttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||| |||||||    
T  2156380 acttacaattgtttgatgcaaaaatactacatca 2156413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 33794191 - 33794019
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| |||||| |||  |  |||||| |||||| |||||||| ||||  || ||||||| ||||||||||||||||||||||| || ||    
T  33794191 ttttacgccttattactctcaacttttactcttgcaacttagtttctaaaacatacaacaaattatcttt-aacttagaatgatatttggtgtcaaacgg 33794093  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  33794092 tccgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 33794019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 12505870 - 12506029
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttac--ta------aaacaaacaatcaactatcttttaact 109  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||| ||| ||||  ||||||   ||      ||| ||||||  |||||||||||||||    
T  12505870 actctaatcctaacaagtttcacgccttattaatctcaactttattattcgcaacatagttaacttagtttctaaataaacaacaaactatcttttaact 12505969  T
Q  110 tagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgata 169  Q
    || |||| |||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  12505970 taaaatggtatttggtgtcgaaaggtccgtgatatcgcactagttcctgaggagacgata 12506029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 40821562 - 40821629
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  40821562 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactacatca 40821629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 143 - 171
Target Start/End: Complemental strand, 34738189 - 34738161
Alignment:
Q  143 atcgcactagtccctgaggagacgatata 171  Q
    |||||||||||||||||||||||||||||    
T  34738189 atcgcactagtccctgaggagacgatata 34738161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 171; Significance: 1e-91; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 5050017 - 5050207
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||    
T  5050017 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttggaatga 5050116  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  5050117 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 5050207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 36875662 - 36875472
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  36875662 actccaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttagaatga 36875563  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36875562 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 36875472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 2446763 - 2446573
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  2446763 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 2446664  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  2446663 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 2446573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 1379064 - 1378872
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  1379064 actctaatcctaacaagttttacgccctattaatctcaattgtatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 1378965  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  1378964 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagt 1378872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 23612506 - 23612316
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  23612506 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgtaatttagttactaaaacaaacaaccaattatcttttaacttggaatga 23612407  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  23612406 tatttcgtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 23612316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 18 - 206
Target Start/End: Original strand, 3924198 - 3924386
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  3924198 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttggaatga 3924297  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacat 206  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3924298 tatttggtatcgaacggtccgcgatatcgcactaatccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacat 3924386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 8142551 - 8142741
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  8142551 actctaatcctaacaagttttacgccctattaatctcaattgtatcatttgtaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 8142650  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8142651 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 8142741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 14287832 - 14287644
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14287832 actctaatcctaacaagatttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttagaatga 14287733  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaatt-gtttgatgcaaaaatattaca 205  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  14287732 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattattttgatgcaaaaatactaca 14287644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 14299017 - 14298826
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  14299017 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttagaatga 14298918  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaatt-gtttgatgcaaaaatattacatca 208  Q
    ||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  14298917 tatttggtgtcaaacggttcgcgatatcgcactagtccctgaggagacgatataaatacttacaattattttgatgcaaaaatactacatca 14298826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 6795555 - 6795365
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  6795555 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 6795456  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||| |||||||    
T  6795455 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagatgatataaatatttactattgtttgatgcaaaaatactacatca 6795365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 6020969 - 6021161
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| ||||| |||||    
T  6020969 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatctttttaacttggaatg 6021068  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6021069 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 6021161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 5056412 - 5056603
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||  ||||    
T  5056412 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaaacaacttatctttttacttgaaatg 5056511  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||    
T  5056512 ataattggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgaaaaaatactacatca 5056603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 15914755 - 15914565
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  15914755 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatga 15914656  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| |||||||    
T  15914655 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttacatttgtttgatgcaaaaatactacatca 15914565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 1948738 - 1948931
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  1948738 actctaatcctaacaagtttcacgccctattaatctcaactttatcttttgcaatttagttactaaaacaaacaaacaaattatcttttaacttagaatg 1948837  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  1948838 atatttggtgttgaacggtccgcgatatcgcactagtctctgaggagacgatacaaatacttactattgtttgatgcaaaaatactacatcagt 1948931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 20 - 208
Target Start/End: Complemental strand, 26602027 - 26601839
Alignment:
Q  20 tctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgata 119  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||||    
T  26602027 tctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatgata 26601928  T
Q  120 tttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| |||||||    
T  26601927 tttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgtaaaaatactacatca 26601839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 48347201 - 48347392
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| | ||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  48347201 actctaatcctaacaagtttcatgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 48347300  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  48347301 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatattacatca 48347392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 48353585 - 48353776
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  48353585 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 48353684  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  48353685 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaatactacatca 48353776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 15949276 - 15949086
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  15949276 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatga 15949177  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  15949176 tatttggtgtcgaacggtccgcgatatcacactagtccctgaggagacgatacaaatacttacaattatttgatgcaaaaatactacatca 15949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 21642635 - 21642449
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||| |||||||||||||||    
T  21642635 actctaatcctaacaagtttcacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaacaaattatcgtttaacttagaatga 21642536  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
        |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  21642535 ----tggtgttgaacggtccgcgatatcgcacttgtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 21642449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 8185497 - 8185678
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  8185497 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 8185596  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8185597 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaa 8185678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 8193057 - 8193238
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  8193057 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 8193156  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8193157 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaa 8193238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 19089925 - 19089734
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  19089925 actctaatcctaacaagttttacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaacaaattatcttttaacttagaatg 19089826  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| || |||||||    
T  19089825 atatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttactatagtttgatgcaaaagtactacatca 19089734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 37026165 - 37025975
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||| ||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  37026165 actctaatcctaacaagtttcacgccttattaatctcaactttatcatttacaacttagttagtcaaacaaacaacaaattatcgtttaacttagaatga 37026066  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  37026065 tatttggtgtcgaacggtctgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 37025975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 9643021 - 9643214
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatca-actatctttt-aacttagaat 115  Q
    |||||||||||||||||||||||||||| |||||||||| |||  |||| ||||||||||||||||||||||||| || | |||||||| ||||||||||    
T  9643021 actctaatcctaacaagttttacgccctgttaatctcaacttttacattagcaatttagttactaaaacaaacaaacatattatctttttaacttagaat 9643120  T
Q  116 gatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaatt-gtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||||||    
T  9643121 gatatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttacaattattttgatgcaaaaatactacatca 9643214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 39433024 - 39432835
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| || || |||||||||||| ||||||||||||| ||  |||||||||||||||||  || ||||||||||||||||||||    
T  39433024 actctaatcctaacaagtttcacaccttattaatctcaactttatcatttgcacttg-gttactaaaacaaacaacaaattatcttttaacttagaatga 39432926  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||| ||||||| ||||||  ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  39432925 tatttgttgtcgaacggtccgtaatatcgcactagtccttgaggagacgatataaatatttactattgtttgatgcaaaaatactacatca 39432835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 10831248 - 10831413
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| |||||| |||  | ||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||    
T  10831248 ttttacgccttattactctcaacttttacttttgcaacttggttactaaaacaaacaacaaattatcttttaacttagaatgatatttggtgtcgaacgg 10831347  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaata 200  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  10831348 tccgtgatatcgcactagtccttgaggagacgatataaatacttactattgtttgatgcaaaaata 10831413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 35 - 200
Target Start/End: Original strand, 11025040 - 11025205
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| |||||| |||  | ||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||    
T  11025040 ttttacgccttattactctcaacttttacttttgcaacttggttactaaaacaaacaacaaattatcttttaacttagaatgatatttggtgtcgaacgg 11025139  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaata 200  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  11025140 tccgtgatatcgcactagtccttgaggagacgatataaatacttactattgtttgatgcaaaaata 11025205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 45433703 - 45433512
Alignment:
Q  18 actctaatcctaacaagtttt-acgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatg 116  Q
    ||||||||||||||||||||| ||||| ||||| |||||| |||  |  ||| || ||||||||||||||||||||  || |||||||||||||||||||    
T  45433703 actctaatcctaacaagtttttacgccttattactctcaacttttactcttgaaacttagttactaaaacaaacaacaaattatcttttaacttagaatg 45433604  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||| |||| | ||||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||| |||||||    
T  45433603 atatttggtgtcgaacggtctgtgatatcgcactagaccctaaggagacgatataaatactcactattgtttgatgcaaaaatactacatca 45433512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 35 - 192
Target Start/End: Original strand, 21901311 - 21901469
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatgatatttggtgtcgaatg 133  Q
    ||||||||||||||| |||||| |||  | |||| ||||||||||||||||||||||| ||| | |||||| ||||||||||||||| |||||||||| |    
T  21901311 ttttacgccctattactctcaacttttacttttgaaatttagttactaaaacaaacaaacaaattatctttcaacttagaatgatatatggtgtcgaacg 21901410  T
Q  134 gtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatg 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21901411 gtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatg 21901469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 33850748 - 33850938
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| || || |||||| |||  |  |||||| ||||||||||||||||||||  || |  |||||||||||||||||    
T  33850748 actctaatcctaacaagtttaacgccttactactctcaacttttactattgcaacttagttactaaaacaaacaacaaattgacttttaacttagaatga 33850847  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||| || |||  | |||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  33850848 tatttggtgtcaaacggtatgtgatatcgcactagtccatgaggagacgatataaatacttaccattttttgatgcaaaaatactacatca 33850938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 85 - 208
Target Start/End: Complemental strand, 1942095 - 1941972
Alignment:
Q  85 acaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaatt 184  Q
    ||||||||  || |||| ||||||||| ||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  1942095 acaaacaacaaattatcgtttaacttataatgatatttggtgtcgaacggtctgcgatatcgcactagtccttgaggagacgatacaaatacttacaatt 1941996  T
Q  185 gtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||| |||||||    
T  1941995 gtttgatgcaaaaatactacatca 1941972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 141 - 212
Target Start/End: Complemental strand, 28442440 - 28442368
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaa-tacttacaattgtttgatgcaaaaatattacatcagttt 212  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  28442440 atatcgcaccagtccctgaggagacgatataaaatacttacaattgtttgatgcaaaaatactacatcagttt 28442368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 41455155 - 41455212
Alignment:
Q  151 agtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  41455155 agtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 41455212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 41542453 - 41542386
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| | | |||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  41542453 atatcgcaccaattcctgtggagacgatataaatacttactattatttgatgcaaaaatactacatca 41542386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 1e-91; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 32328598 - 32328788
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  32328598 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttagaatga 32328697  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32328698 tatctggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 32328788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 34711662 - 34711852
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||    
T  34711662 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcgtttaacttgaaatga 34711761  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  34711762 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 34711852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 11058255 - 11058446
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  11058255 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 11058354  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  11058355 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcag 11058446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 1428528 - 1428720
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  1428528 actctaatcctaacaagttttacgccttattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 1428627  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  1428628 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcagt 1428720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 4186802 - 4186612
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |    
T  4186802 actctaatcctaacaagttctacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttagaatta 4186703  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||    
T  4186702 tatttggtgtcgaacggtccgcaatatcgcactagtccctgaggagacgatataaatacttacaattgtttgaggcaaaaatactacatca 4186612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 9864865 - 9865056
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| |||||||||||    
T  9864865 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatctttttaacttagaatg 9864964  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  9864965 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagaagatataaatacttacaattgtttgatgcaaaaatactacatca 9865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 4020340 - 4020531
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  4020340 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 4020439  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4020440 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 4020531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 4026766 - 4026957
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  4026766 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 4026865  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4026866 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 4026957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 7062588 - 7062779
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  7062588 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 7062687  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7062688 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 7062779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 34655368 - 34655177
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  34655368 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 34655269  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34655268 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 34655177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 34648917 - 34648726
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | || ||||||||||||||| ||| |||||||| ||||| |||||    
T  34648917 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagatactaaaacaaacaaccaattatctttttaacttggaatg 34648818  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34648817 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 34648726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 4738428 - 4738620
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  4738428 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 4738527  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
     |||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4738528 gtatttggtgtcgaacggtccgcgttattgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 4738620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 21262679 - 21262870
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  21262679 actctaatcctaacaagttttacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaacaaattatcttttaacttagaatg 21262778  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  21262779 atatttggtgtcgaacgatccgcgatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactacatca 21262870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 31548012 - 31547833
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||||||| |||||||    
T  31548012 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatcttttaactaagaatga 31547913  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaa 197  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||| ||||    
T  31547912 tatttggtgtcgaacggtccgcgatatcgcactagtccctaaagagacgatataaatacttataattgtttgatgtaaaa 31547833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 30117373 - 30117563
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||  || ||| ||||||||||||||||    
T  30117373 actctaatcctaacaagtttcacgccttattaatctcaattttattattagcaatttagttactaaaacaaacaacaaattatattttaacttagaatga 30117472  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  30117473 tatttagtgtcgaacggtctgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 30117563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 29907007 - 29906817
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||  || ||| ||||||||||||||||    
T  29907007 actctaatcctaacaagtttcacgccttattaatctcaattttattattagcaatttagttactaaaacaaacaacaaattatattttaacttagaatga 29906908  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||| |||||||| |||| | |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  29906907 tatttagtgtcgaacggtctgtgatatcgcactagtccctaaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 29906817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 7069807 - 7069995
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  7069807 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 7069906  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7069907 gtatttggtg---aacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 7069995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 13671922 - 13672112
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||  |||||||||||| |||||||||||||| ||||||| | ||| ||||||  || |||| ||||||||| |||||    
T  13671922 actctaatcctaacaagtttcacgcattattaatctcaactttatcatttgcaacttagttattcaaataaacaacaaattatcgtttaacttataatga 13672021  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||| |||||||    
T  13672022 tatttggtgtcgaacggtccgcgatatcgcactagtccctaaggagacgagataaatacttactattgtttgatgcaaaaatactacatca 13672112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 27670211 - 27670021
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| || |  |||||||||||| |||||||||||||| ||||||| ||||||||||||  || |||| |||||||||||||||    
T  27670211 actctaatcctaacaagtttcacactttattaatctcaactttatcatttgcaacttagttattaaaacaaacaacaaattatcgtttaacttagaatga 27670112  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| | |||  ||||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  27670111 tatttggtgtcgaacgatccatgatatcgcactagtctctgaggagacgatataaatatttactattgtttgatgcaaaaatattacatca 27670021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 1167685 - 1167755
Alignment:
Q  103 tttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaa 173  Q
    ||||||||| |||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1167685 tttaacttaaaatgatatttagtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatataaa 1167755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 1461244 - 1461190
Alignment:
Q  154 ccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1461244 ccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 1461190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 7825981 - 7825914
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7825981 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactacatca 7825914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 10800803 - 10800870
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  10800803 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactacatca 10800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 24908414 - 24908347
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||  ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  24908414 atatcgcaccagtccctatggagacgatataaatacttactattgtttgatgcaaaaatactacatca 24908347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 14118790 - 14118857
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||  |||||||||| ||||||||| |||||||||||||||||||| |||||||    
T  14118790 atatcgcaccagtccctatggagacgatacaaatacttaaaattgtttgatgcaaaaatactacatca 14118857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 173
Target Start/End: Complemental strand, 11015248 - 11015215
Alignment:
Q  140 gatatcgcactagtccctgaggagacgatataaa 173  Q
    ||||||||||||||||||||||||||||||||||    
T  11015248 gatatcgcactagtccctgaggagacgatataaa 11015215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 10081685 - 10081762
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttag 112  Q
    ||||||||| ||||| |||||| |||  |  |||||| |||||| |||||||||||||  || |||||||||||||||    
T  10081685 ttttacgccttattactctcaaattttactcttgcaacttagtttctaaaacaaacaacaaattatcttttaacttag 10081762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 20 - 56
Target Start/End: Original strand, 1167594 - 1167630
Alignment:
Q  20 tctaatcctaacaagttttacgccctattaatctcaa 56  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  1167594 tctaatcctaacaagtttcacgccttattaatctcaa 1167630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 171; Significance: 1e-91; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 32746487 - 32746297
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  32746487 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttggaatga 32746388  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32746387 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 32746297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 6036383 - 6036193
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| |||| |    
T  6036383 actctaatcctaacaagtttcacgccctattaatctcaattttatcattttcaatttagttactaaaacaaacaaccaattatcttttaacttggaatta 6036284  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  6036283 tatttggtgtcaaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattatttgatgcaaaaatactacatca 6036193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 13015103 - 13014913
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||| |||||||||| |||  |||| ||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  13015103 actctaatcctaacaagttttacgccctgttaatctcaacttttacattagcaatttagttactaaaacaaacaaccaattatcttttaacttggaatga 13015004  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13015003 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 13014913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 25893348 - 25893155
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| || ||||| |||||||||||    
T  25893348 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattaactttttaacttagaatg 25893249  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25893248 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagt 25893155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 9570655 - 9570845
Alignment:
Q  20 tctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaa-cttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| ||||||||||    
T  9570655 tctaatcctaacaagttttacgccctattaatctcaattttatcatctgcaatttagttactaaaacaaacaaacaacttatcttttaaacttagaatga 9570754  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    || ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9570755 taattggtgtcgaacggtctgcaatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 9570845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 20 - 208
Target Start/End: Original strand, 9577157 - 9577347
Alignment:
Q  20 tctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaa-cttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||| |    
T  9577157 tctaatcctaacaagttttacgccctattaatctcaattttatcatctgcaatttagttactaaaacaaacaaacaacttatcttttaaacttagaataa 9577256  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    || ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9577257 taattggtgtcgaacggtctgcaatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 9577347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 24179191 - 24179001
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatc-ttttaacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||| ||||||||| |||||    
T  24179191 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatctttttaacttggaatg 24179092  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24179091 gtatttggtgtcgaacggtccgcgatatcgcactagt-cctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 24179001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 27502072 - 27502253
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  27502072 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 27502171  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27502172 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgaaaaaa 27502253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 4311591 - 4311782
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  4311591 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcatttaacttagaatga 4311690  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||| ||| ||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  4311691 tatttggtgttgaacggtcctcaatatcgcactagtccctgaggagacgatacaaatacttacaattgtttgttgcaaaaatactacatcag 4311782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 41353978 - 41353788
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| ||||||||| |||||    
T  41353978 actctaatcctaacaagttttacgtcctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttaaaatga 41353879  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| |||||||    
T  41353878 tatttggtgtcgaacggtccgcgatatcgcactagtccctaagaagacgatacaaatacttacaattgtttgatgcaaaaatactacatca 41353788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 43931699 - 43931509
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||  |||| ||||||||||||||||||||  || |||||||||||||||||||     
T  43931699 actctaatcctaacaagtttcacgccttattaatctcaattttattatccgcaacttagttactaaaacaaacaacaaattatcttttaacttagaatgg 43931600  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  43931599 tatttggtgtcggacggtccgtgatatcgcactagtccctaaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 43931509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 10941409 - 10941599
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||||||||||||||||  || |||||||||||||||||| |    
T  10941409 actctaatcctaacaagtttcacgccttattaatctcaattttattattcgcaacttagttactaaaacaaacaacaaattatcttttaacttagaatta 10941508  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||| |||||| || |||| | |||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||| |||||||    
T  10941509 tattaggtgtcaaacggtctgtgatatcgcactagtccttgaggagacgatataaatacttactattggttgatgcaaaaatactacatca 10941599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 41354175 - 41354365
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||| |||||| |||  | |||||||||||||||||||||||||||| ||| |   ||| ||||||||||||    
T  41354175 actctaatcctaacaagtttcacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaacaaattattttcaacttagaatga 41354274  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||  |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  41354275 tatttggtgtcgaacggtccatgatatcgcactagtccttgaggagacgatataaatacttgcaattgtttgatgcaaaaatactacatca 41354365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 23068582 - 23068391
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatca-actatctttt-aacttagaat 115  Q
    ||||||||||||||||||||  |||||||||||| |||| |||  | |||||||||||||||||||||||||||| || | |||||||| ||||||||||    
T  23068582 actctaatcctaacaagtttc-cgccctattaatttcaacttttacttttgcaatttagttactaaaacaaacaaacagattatctttttaacttagaat 23068484  T
Q  116 gatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||| |||| |||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  23068483 gatatttggtgacgaacggtctgcgatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactacatca 23068391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 4590894 - 4590721
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatgatatttggtgtcgaatg 133  Q
    ||||||||||||||| |||||| |||| | |||  | ||| ||||||||||||||||| ||||| |||||||||||| |||||||| ||||||||||| |    
T  4590894 ttttacgccctattactctcaactttaacttttata-tttggttactaaaacaaacaaacaacttatcttttaacttggaatgataattggtgtcgaacg 4590796  T
Q  134 gtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4590795 gtctgcaatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 4590721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 43995194 - 43994997
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttg--------caatttagttactaaaacaaacaatcaactatcttttaact 109  Q
    ||||||||||| |||||||| ||||| |||||||||||| ||||||||||         ||| |||||| |||||||||||||  |||||||||||||||    
T  43995194 actctaatcctgacaagtttcacgccttattaatctcaactttatcatttcaacatagtcaacttagtttctaaaacaaacaacaaactatcttttaact 43995095  T
Q  110 tagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggag--acgatataaatacttacaattgtttgatgcaaaaatattaca 205  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||  |||||||||||||||||| ||||    
T  43995094 tagaatgatatttgatgtcgaatggtccgtgatatcgcactagtccctgaggagacacgatataaatacttacttttgtttgatgcaaaaatactaca 43994997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 102 - 208
Target Start/End: Original strand, 18341481 - 18341587
Alignment:
Q  102 ttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatat 201  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18341481 ttttaacttggaatggtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatac 18341580  T
Q  202 tacatca 208  Q
    |||||||    
T  18341581 tacatca 18341587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 3577098 - 3577233
Alignment:
Q  73 ttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataa 172  Q
    ||||||| | ||||||||||  || |||| ||||||||||||| ||||||||||||||| ||||    ||||||||||||||||||||||||||||||||    
T  3577098 ttagttattcaaacaaacaacaaattatcatttaacttagaataatatttggtgtcgaacggtcttttatatcgcactagtccctgaggagacgatataa 3577197  T
Q  173 atacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||| ||||||||||||||||||| |||||||    
T  3577198 atacttactattgtttgatgcaaaaatactacatca 3577233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 83 - 208
Target Start/End: Original strand, 20651301 - 20651429
Alignment:
Q  83 aaacaaacaatcaacta-tcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacg--atataaatactta 179  Q
    |||||||||| |||| | |||||||||||| |||||||||||||||||||  ||||  |||||| ||||||||||| ||||||||  |||||||||||||    
T  20651301 aaacaaacaaacaaccaatcttttaacttaaaatgatatttggtgtcgaacagtccatgatatcacactagtccctaaggagacgatatataaatactta 20651400  T
Q  180 caattgtttgatgcaaaaatattacatca 208  Q
    |  || ||||||| ||||||| |||||||    
T  20651401 cttttatttgatgaaaaaatactacatca 20651429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 20952950 - 20953019
Alignment:
Q  100 tcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgata 169  Q
    |||||||||||||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||||    
T  20952950 tcttttaacttagaatgatatttggtgtcgaacggtctgtgatatcgcactagtacctgaggagacgata 20953019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 141 - 209
Target Start/End: Complemental strand, 4674921 - 4674853
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  4674921 atatcgcaccagtccctgtggagacgatacaaatacttacaattgtttgatgcaaaaatactacatcag 4674853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 18866772 - 18866705
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18866772 atatcgcaccagtccctgtggagacgatttaaatacttactattgtttgatgcaaaaatactacatca 18866705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 2785741 - 2785661
Alignment:
Q  102 ttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgat--ataaatacttac 180  Q
    |||||||||  ||||||| | | ||||||| |||||  |||||||||||||||||||||||||||||  ||||||||||||    
T  2785741 ttttaacttgaaatgataatcgatgtcgaacggtccatgatatcgcactagtccctgaggagacgatacataaatacttac 2785661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 24899371 - 24899303
Alignment:
Q  141 atatcgcactagtccctgaggagacgatata-aatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||| |||||  ||||||| |||||||    
T  24899371 atatcgcactagtccctgtggagacgatatacaatacttacttttgattgatagaaaaatactacatca 24899303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 24905837 - 24905769
Alignment:
Q  141 atatcgcactagtccctgaggagacgatata-aatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||| |||||||||||| |||||||||  ||| |||||  ||||||| |||||||    
T  24905837 atatcgcactagtccctgtggagacgatatacaatacttacttttgattgatagaaaaatactacatca 24905769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 17735373 - 17735310
Alignment:
Q  146 gcactagtccctgaggagacga-tataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||| || |||||||||| |||| |||||  ||||||| |||||||    
T  17735373 gcactagtccctgaggagacgattacaaatacttactattgattgatagaaaaatactacatca 17735310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 146 - 208
Target Start/End: Complemental strand, 19036642 - 19036579
Alignment:
Q  146 gcactagtccctgaggagacga-tataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||| || |||||||||| |||| |||||  ||||||| |||||||    
T  19036642 gcactagtccctgaggagacgattacaaatacttactattgattgatagaaaaatactacatca 19036579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 167; Significance: 3e-89; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 30238377 - 30238187
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  30238377 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttggaatga 30238278  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  30238277 tatttggtgtcgaacggtccgcgatatcgcactagtccttgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 30238187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 55462877 - 55463067
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||    
T  55462877 actctaatcctaacaagtttcacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatcttttaacttggaatga 55462976  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55462977 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 55463067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 41373104 - 41372913
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  41373104 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaacaacttatcttttaacttagaatg 41373005  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||| ||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  41373004 ataattggtgtcgaacggtctgcaatatcgcactagtccctgaggagacgatataaatacttgcaattgtttgatgcaaaaatactacatca 41372913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 27590422 - 27590229
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| ||||||||||||| |||||     
T  27590422 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttaacttggaatgg 27590323  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagtt 211  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27590322 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagtt 27590229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 150; E-Value: 5e-79
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 37368419 - 37368612
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| ||||| |||||    
T  37368419 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatctttttaacttggaatg 37368518  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37368519 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagt 37368612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 8103999 - 8103807
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| ||||| |||||    
T  8103999 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatctttttaacttggaatg 8103900  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8103899 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 8103807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 17456972 - 17456781
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  17456972 actctaatcctaacaagtttcacgccctattaatctcaattttgtcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatg 17456873  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17456872 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 17456781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 7780524 - 7780334
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaa-ttttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||  ||  |||||| |||||||||||    
T  7780524 actctaatcctaacaagttttacgccctattactctcaacttttatcatttgcaatttcgttactaaaacaaacaacaaatcatcttt-aacttagaatg 7780426  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7780425 atatttagtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 7780334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 16405459 - 16405269
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||| ||    
T  16405459 actctaatcctaacaagttttacgccttattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaacga 16405360  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||| | |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  16405359 tatttggtgtcgaacggtctgtgatatcgcactagtccctaaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 16405269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 39 - 208
Target Start/End: Complemental strand, 48914996 - 48914826
Alignment:
Q  39 acgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatgatatttggtgtcgaatggtcc 137  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| ||||| |||||||||||||| |||||    
T  48914996 acgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatcttttcaacttggaatggtatttggtgtcgaacggtcc 48914897  T
Q  138 gcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  48914896 gcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 48914826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 13594225 - 13594032
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatca-actatctttt-aacttagaat 115  Q
    |||||||||||||||||||||||||||| |||||||||| |||  |||| ||||||||||||||||||||||||| || | |||||||| ||||||||||    
T  13594225 actctaatcctaacaagttttacgccctgttaatctcaacttttacattagcaatttagttactaaaacaaacaaacatattatctttttaacttagaat 13594126  T
Q  116 gatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaatt-gtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||| |||||||    
T  13594125 gatatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttacaattattttgatgcaaaaatactacatca 13594032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 2947909 - 2947772
Alignment:
Q  71 atttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatat 170  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  2947909 atttggttactaaaacaaacaatcaactatcgtttaacttagaatgatatttggtgtcgaacggtccgcaatatcgcactagtccctgaggagacgatat 2947810  T
Q  171 aaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  2947809 aaatacttactattgtttgatgcaaaaatactacatca 2947772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 23 - 208
Target Start/End: Original strand, 36754901 - 36755094
Alignment:
Q  23 aatcctaacaagttttacgccctattaatctcaattttatcatttgcaat---------ttagttactaaaacaaacaatcaactatcttttaacttaga 113  Q
    |||||||| |||||| ||||| |||||||||||| |||||||||| ||||         ||||||||||||||||||||  ||||||||||||| |||||    
T  36754901 aatcctaataagtttcacgccttattaatctcaactttatcattt-caatatagttaacttagttactaaaacaaacaacaaactatcttttaatttaga 36754999  T
Q  114 atgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  36755000 atgatatttggtgtcgaatagtccgtgatatcgcactagtccatgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 36755094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 16838464 - 16838654
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||| |||  |  |||||| ||||||||||||||||||||  ||  |||||| ||||||||||||    
T  16838464 actctaatcctaacaagtttcacgccttattaatctcaacttttactcttgcaacttagttactaaaacaaacaacaaatcatcttt-aacttagaatga 16838562  T
Q  118 tatttggtgtcgaatggtcc-gcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||| || ||||| | |||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||    
T  16838563 tatttggtgtctaacggtcccgtgatatcgcactagtccttgaggagaagatataaatacttactattgtttgatgcaaaaatactacatca 16838654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 30211641 - 30211823
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||| |||||||||| | ||| |||||||||||||||||| ||| |||| ||||||||||||||||||||  || |||||||||||        |    
T  30211641 actctaatcataacaagtttcatgccttattaatctcaattttattattcgcaacttagttactaaaacaaacaacaaattatcttttaac--------a 30211732  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||| | ||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||    
T  30211733 tatttggtgtcgaacggtctgtgatatcgcactagtccctgagaagacgatataaatacttactatt-tttgatgcaaaaatactacatcag 30211823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 13003909 - 13004082
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| |||||| |||  |  |||||| || |||||||||||||||||  || | |||||||||||| |||||||||||||||||||  |    
T  13003909 ttttacgccttattactctcaacttttactcttgcaactttgttactaaaacaaacaacaaattgtcttttaacttataatgatatttggtgtcgaacag 13004008  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    || | ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  13004009 tctgtgatatcgcactagtccctgaggagacgatataaatacttaatattgtttgatgctaaaatactacatca 13004082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 5660654 - 5660850
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaa-ttttatcatttgcaatttagtt-ac-----taaaacaaacaatcaactatcttttaactt 110  Q
    |||||||||||||||||||| ||||| |||||||||||| ||||||  || |||| |||||| ||     | |||||||||| |||   ||| |||||||    
T  5660654 actctaatcctaacaagtttcacgccttattaatctcaacttttattctt-gcaaattagttcacatagtttaaacaaacaaacaa---tctcttaactt 5660749  T
Q  111 agaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacg--atataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    | ||||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||||||||| ||||  |||||||| | ||||||| |||||||    
T  5660750 aaaatgatatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatatataaatagttacttttgtttgaaggaaaaatactacatca 5660849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 167; Significance: 3e-89; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 34834917 - 34835107
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||    
T  34834917 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatctagttactaaaacaaacaatcaactatcgtttaacttgaaatga 34835016  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34835017 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 34835107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 34841361 - 34841551
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||    
T  34841361 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatctagttactaaaacaaacaatcaactatcgtttaacttgaaatga 34841460  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34841461 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 34841551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 2157729 - 2157539
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  2157729 actctaatcctaacaagttttacgccctattaatctcaattgtatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 2157630  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2157629 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 2157539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 42931477 - 42931667
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| ||||||| ||||||    
T  42931477 actctaatcctaacaagtttcacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaaccaattatctgttaacttggaatga 42931576  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42931577 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 42931667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 21332099 - 21332290
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||| ||||||||||||||||||||||||    
T  21332099 actctaatcctaacaagtttcacgccctattaatctcaattttatcatttgaaatttagtcattaaaacaaacaaccaactatcttttaacttagaatga 21332198  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  21332199 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggatacgatataaatacttacaattgtttgatgcaaaaatactacatcag 21332290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 13902062 - 13902252
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  13902062 actctaatcctaacaagttttacgccctattaatctcaattgtatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 13902161  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  13902162 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 13902252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 43267976 - 43267782
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||  ||||    
T  43267976 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaaacaacttatcttttaacttgaaatg 43267877  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagtt 211  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43267876 ataattggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagtt 43267782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 36782289 - 36782481
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||| |||||    
T  36782289 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattgagttactaaaacaaacaaccaattatctttttaacttggaatg 36782388  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36782389 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 36782481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 21341987 - 21342178
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| ||||||||||||||||||||    
T  21341987 actctaatcctaacaagtttcacgccctattaatctcaattttatcatttgcaatttagtcattaaaacaaacaaccaattatcttttaacttagaatga 21342086  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||    
T  21342087 tatttggtgtcgaacggtccgcgatatcgcactagtccctgagaatacgatataaatacttacaattgtttgatgcaaaaatactacatcag 21342178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 2164145 - 2163955
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  2164145 actctaatcctaacaagttttacgccctattaatctcaattgtatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 2164046  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  2164045 tatttggtgtcgaacggtctgcgatatcgcactagtccctgaggagactatataaatacttacaattgtttgatgcaaaaatactacatca 2163955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 12950913 - 12950723
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  12950913 actctaatcctaacaagttttacgccttattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 12950814  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  12950813 tatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 12950723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 15852667 - 15852475
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| ||||| |||||    
T  15852667 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatctttttaacttggaatg 15852568  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15852567 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 15852475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 45012100 - 45011907
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  45012100 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 45012001  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  45012000 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagt 45011907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 29485044 - 29484852
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  29485044 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 29484945  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29484944 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 29484852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 2021553 - 2021745
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  2021553 actctaatcctaacaagttttacaccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatga 2021652  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  2021653 tatttggtgtcgaacgtttcgcgatatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatactacatcagt 2021745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 16856592 - 16856783
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || ||||||| ||||| ||||||    
T  16856592 actctaatcctaacaagtnttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcttt-aactttgaatga 16856690  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  16856691 tatttgctgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactacatcagt 16856783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 16817435 - 16817626
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || ||||||| ||||| ||||||    
T  16817435 actctaatcctaacaagtgttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcttt-aactttgaatga 16817533  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||    
T  16817534 tatttgctgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactacatcagt 16817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 21068063 - 21068253
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    ||||||||||||| |||||| || |||||||| |||||| |||  | ||||||||||||||||||| |||||||| ||| | ||||||||||||||||||    
T  21068063 actctaatcctaa-aagtttcacaccctattactctcaacttttacttttgcaatttagttactaatacaaacaaacaaattatcttttaacttagaatg 21068161  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||    
T  21068162 atatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatactt-caattgtttgatgtaaaaatactacatcag 21068253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 35 - 206
Target Start/End: Complemental strand, 41455705 - 41455535
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| |||||| |||  | |||||| ||  |||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||    
T  41455705 ttttacgccttattactctcaacttttacttttgcacttg-gttactaaaacaaacaacaaattatcttttaacttagaatgatatttggtgtcgaacgg 41455607  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacat 206  Q
    || | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  41455606 tctgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacat 41455535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 106 - 208
Target Start/End: Complemental strand, 36838172 - 36838070
Alignment:
Q  106 aacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattaca 205  Q
    |||||| |||| || ||| ||| ||| |||||| |||||||||||| ||||| ||||||||||||||||||||||  |||||||||||||||||| ||||    
T  36838172 aacttataatggtaattgatgttgaaaggtccgtgatatcgcactaatccctaaggagacgatataaatacttacttttgtttgatgcaaaaatactaca 36838073  T
Q  206 tca 208  Q
    |||    
T  36838072 tca 36838070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 33033745 - 33033670
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagttttgca 216  Q
    ||||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||||| ||||||| |||||||    
T  33033745 atatcgcaccagtccctgtggagatgatacaaatacttacaattgtttgatgcaaaaatactacatcacttttgca 33033670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 44611236 - 44611169
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  44611236 atatcgcaccagtccctgtggagacgatataaatacttactattgtttgatgcaaaaatactacatca 44611169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 171
Target Start/End: Original strand, 45700843 - 45700908
Alignment:
Q  106 aacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatata 171  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  45700843 aacttataatgatatttggtgtcgaacggtccgtgatatcgcactagtccctgagaagacgatata 45700908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 11910150 - 11910218
Alignment:
Q  103 tttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatata 171  Q
    ||||||||| ||||||||||| |||| || |||  | ||||||||||||||||||||||||||||||||    
T  11910150 tttaacttaaaatgatatttgatgtcaaacggtttgtgatatcgcactagtccctgaggagacgatata 11910218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 208
Target Start/End: Complemental strand, 43669760 - 43669693
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||| |||||||  |||||||||||||||| |||  ||||||||||||||||||| |||||||    
T  43669760 atatcgcaccagtccctatggagacgatataaatatttattattgtttgatgcaaaaatactacatca 43669693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 11910057 - 11910101
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttat 62  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||    
T  11910057 actctaatcctaacaagttttacgccttattaatctcacttttat 11910101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 206
Target Start/End: Complemental strand, 13162804 - 13162737
Alignment:
Q  140 gatatcgcactagtccctgaggagacgatata-aatacttacaattgtttgatgcaaaaatattacat 206  Q
    |||||||||||||||||||||||||||||||| |||||||||  ||| |||||  ||||||| |||||    
T  13162804 gatatcgcactagtccctgaggagacgatatacaatacttacttttgattgatagaaaaatactacat 13162737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 17784674 - 17784744
Alignment:
Q  140 gatatcgcactagtccctgaggagacg--atataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||||  ||||||||||||||  ||| |||||  ||||||| |||||||    
T  17784674 gatatcgcactagtccctgaggagacgatatataaatacttacttttgattgatagaaaaatactacatca 17784744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 13162934 - 13162874
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaa-ttttatcatttgcaatttagtt 78  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||| || |||||||||||    
T  13162934 actctaatcctaacaagttttacgccttattactctcaacttttatc-ttcgcaatttagtt 13162874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 24853210 - 24853243
Alignment:
Q  140 gatatcgcactagtccctgaggagacgatataaa 173  Q
    ||||||||||||||||||||||||||||||||||    
T  24853210 gatatcgcactagtccctgaggagacgatataaa 24853243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 37439718 - 37439751
Alignment:
Q  140 gatatcgcactagtccctgaggagacgatataaa 173  Q
    |||||||||||||| |||||||||||||||||||    
T  37439718 gatatcgcactagtgcctgaggagacgatataaa 37439751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 45700749 - 45700802
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaa 71  Q
    |||||||| ||||||||||| ||||| |||||||||||| ||||| ||| ||||    
T  45700749 actctaattctaacaagtttcacgccttattaatctcaactttattattcgcaa 45700802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 167; Significance: 3e-89; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 6238772 - 6238582
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||    
T  6238772 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatctagttactaaaacaaacaatcaactatcgtttaacttgaaatga 6238673  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6238672 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 6238582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 45015898 - 45015708
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  45015898 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 45015799  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45015798 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 45015708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 18 - 210
Target Start/End: Complemental strand, 42092013 - 42091821
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  42092013 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 42091914  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  42091913 tatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcagt 42091821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 8e-84
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 39059815 - 39060008
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||  |||||    
T  39059815 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaatcaactatcgtttaacttgaaatga 39059914  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagtt 211  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  39059915 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagtt 39060008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 39053443 - 39053633
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||||||||  |||||    
T  39053443 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaatcaactatcgtttaacttgaaatga 39053542  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39053543 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 39053633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 4599646 - 4599455
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||| ||| | ||||||||||||||||||    
T  4599646 actctaatcctaacaagttttacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaacaaattatcttttaacttagaatg 4599547  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  4599546 atatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 4599455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 23764537 - 23764727
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  23764537 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatga 23764636  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||    
T  23764637 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaacacttacaattgtttgatgcaaaaatactacatca 23764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 18 - 211
Target Start/End: Original strand, 27240235 - 27240429
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  27240235 actctaatcctaacaagtttcacgccttattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 27240334  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagtt 211  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27240335 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcagtt 27240429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 29001848 - 29001658
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  29001848 actctaatcctaacaagttttacgccttattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatga 29001749  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  29001748 tatttggtgtcgaacggtccgcgatatcgcactagtcccggaggagacgatacaaatacttacaattgtttgatgcaaaaatactacatca 29001658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 43686746 - 43686553
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatca-actatctttt-aacttagaat 115  Q
    |||||||||||||||||||||||||||| |||||||||| |||  |||| ||||||||||||||||||||||||| || | |||||||| ||||| ||||    
T  43686746 actctaatcctaacaagttttacgccctgttaatctcaacttttacattagcaatttagttactaaaacaaacaaacagattatctttttaacttggaat 43686647  T
Q  116 gatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43686646 ggtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 43686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 26621584 - 26621396
Alignment:
Q  21 ctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatgata 119  Q
    ||||||||||||||||||||||||||||| |||||| |||  | |||| ||||||||||||||||||||||| ||| | |||||||||||||||||||||    
T  26621584 ctaatcctaacaagttttacgccctattactctcaacttttacttttgaaatttagttactaaaacaaacaaacaaattatcttttaacttagaatgata 26621485  T
Q  120 tttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  26621484 tttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactacatca 26621396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 41305619 - 41305800
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||| ||| | |||||| |||||||||||    
T  41305619 actctaatcctaacaagttttacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaacaaattatctttaaacttagaatg 41305718  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  41305719 atatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaa 41305800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 1174723 - 1174531
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||| |||||| |||  | |||||||||||||||||||||||||||| ||| | |||||| |||||||||||    
T  1174723 actctaatcctaacaagtttcacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaacaaattatctttcaacttagaatg 1174624  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  1174623 atatttggtgtcgaacggtccatgatatcgcactagtccctgaggagatgatataaatacttacaattgtttgatgcaaaaatactacatcag 1174531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 41297634 - 41297443
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaa-ctatcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | || ||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  41297634 actctaatcctaacaagttttacgccctattactctcaacttttactttagcaatttagttactaaaacaaacaaacaaactatctttcaacttagaatg 41297535  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  41297534 atatttggagtcgaacggtccgcgatatcgcactagtccttgaggagacgatagaaatacttacaattatttgatgcaaaaatactacatca 41297443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 31072435 - 31072245
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| | ||| |||||||||||||||||| ||| |||| ||||||||||||||||||||  || ||||||||| ||||||||||    
T  31072435 actctaatcctaacaagtttcatgccttattaatctcaattttattattcgcaacttagttactaaaacaaacaacaaattatcttttagcttagaatga 31072336  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||    
T  31072335 tatttggtgtcgaacggtctgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaactactacatca 31072245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 41299293 - 41299474
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaa-tcaactatcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  41299293 actctaatcctaacaagttttacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaataaattatcttttaacttagaatg 41299392  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  41299393 atatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatacaaatacttagtattgtttgatgcaaaaa 41299474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 76 - 208
Target Start/End: Original strand, 2824982 - 2825114
Alignment:
Q  76 gttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaata 175  Q
    |||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2824982 gttactaaaacaaacaacatattatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaata 2825081  T
Q  176 cttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||||||||||    
T  2825082 cttacaattgtttgatgcaaaaatattacatca 2825114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 28413796 - 28413972
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| |||||| |||  | ||||||| || |||||||||||||||||  || |||||||||||||||||||||||||||||||||| ||    
T  28413796 ttttacgccttattactctcaacttttacttttgcaacttggttactaaaacaaacaacaaattatcttttaacttagaatgatatttggtgtcgaacgg 28413895  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagtt 211  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  28413896 tccgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatattacaccagtt 28413972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 9869222 - 9869031
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||| | |||||||||| | ||| ||||||||||||||||||||    
T  9869222 actctaatcctaacaagtttcacaccttattaatctcaattttatcatttgcaacttagtcattaaaacaaactaccaattatcttttaacttagaatga 9869123  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||    |||||||| ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  9869122 tatttggtgtcgaacggtttatgatatcgcgctagttcctgaggagacaatataaatacttactattgtttgatgcaaaaatactacatcag 9869031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 11913367 - 11913556
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaa-ctatcttttaa-cttagaat 115  Q
    |||||||||||||||||||| ||||| |||||||||||||||||| ||| |||| ||||||    |||||||||| ||| ||||||||||| ||||||||    
T  11913367 actctaatcctaacaagtttcacgccttattaatctcaattttattattcgcaacttagttt---aaacaaacaaacaatctatcttttaaacttagaat 11913463  T
Q  116 gatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  11913464 gatatttggtgtcgaatggttcgtgatatcgcactagtccatgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 11913556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 44241474 - 44241284
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||| || ||||||||||| ||||||| | ||||||||||  || |||| |||||||||||||||    
T  44241474 actctaatcctaacaagtttcacgccttattaatctcaacttcatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatga 44241375  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||| | ||||||||| |||| ||||||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  44241374 tatttggtgtcgaacggtctgtgatatcgcaatagttcctgaggagacgatataaatatttactattgtttgatgcaaaaatactacatca 44241284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 5445069 - 5445255
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| || || |||||||||||| |||  |  |||||| ||||||||||||||||||||  || ||||||| ||||||||||||    
T  5445069 actctaatcctaacaagtttcacaccttattaatctcaacttttactcttgcaacttagttactaaaacaaacaacaaattatcttt-aacttagaatga 5445167  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattaca 205  Q
    || ||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  5445168 tagttggtgtcgaacggtccgtgatatcgcactagtctctgaggagacaatataaatacttactattgtttgatgcaaaaataataca 5445255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 20 - 200
Target Start/End: Complemental strand, 44916453 - 44916265
Alignment:
Q  20 tctaatcctaacaagttttacgccctattaatctcaattttatcatttgca--------atttagttactaaaacaaacaatcaactatcttttaactta 111  Q
    |||||||||||||||||| ||||| |||||||||||| ||||||||||  |        | ||||||  ||||||||||||  ||||||||||||| |||    
T  44916453 tctaatcctaacaagtttcacgccttattaatctcaactttatcatttcaacatagttaacttagtttttaaaacaaacaacaaactatcttttaattta 44916354  T
Q  112 gaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaata 200  Q
    ||||||||||||||||||||||||||| |||||||||||||||| | | ||||||||||||||||||||  ||||||||||||||||||    
T  44916353 gaatgatatttggtgtcgaatggtccgtgatatcgcactagtccgtaatgagacgatataaatacttacttttgtttgatgcaaaaata 44916265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 1116090 - 1116282
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||| ||| |||||| || || ||||| |||||| |||  |  |||||| |||||||||||| |||||||  || || |||||||||||||||||    
T  1116090 actctaatcataagaagtttcacaccttattactctcaacttttactcttgcaacttagttactaaa-caaacaacaaattagcttttaacttagaatga 1116188  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagttt 212  Q
    |||||||||||||| |||  | ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  1116189 tatttggtgtcgaacggtatgtgatatcgcactagtccctgaggagacgatataaatactta-tattgtttgatgcaaaaatactacatcagttt 1116282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 66 - 200
Target Start/End: Complemental strand, 32797804 - 32797671
Alignment:
Q  66 ttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagac 165  Q
    |||||| |||||| |||||||||||||  || ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||    
T  32797804 ttgcaacttagtttctaaaacaaacaacaaattatcttt-aacttagaatgatatttggtgtcgaacggtccgtgatatcgcactagtctctgaggagac 32797706  T
Q  166 gatataaatacttacaattgtttgatgcaaaaata 200  Q
    ||||||||||||||| |||||||||||||||||||    
T  32797705 gatataaatacttactattgtttgatgcaaaaata 32797671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 35 - 206
Target Start/End: Original strand, 38672889 - 38673061
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaa-cttagaatgatatttggtgtcgaatg 133  Q
    ||||||||| ||||| |||||| |||  |  |||||| |||||| ||||||| |||||  || ||||||| || |||||||||||||||||||||||| |    
T  38672889 ttttacgccttattactctcaacttttactcttgcaacttagtttctaaaacgaacaacaaattatctttcaaacttagaatgatatttggtgtcgaacg 38672988  T
Q  134 gtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacat 206  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  38672989 gtcggtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacat 38673061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 35 - 208
Target Start/End: Complemental strand, 39806156 - 39805984
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| ||||||||||  |  |||||| |||||| ||||||| |||||  || ||||||| |||||| |||||||||||||||| || ||    
T  39806156 ttttacgccttattactctcaatttttactcttgcaacttagtttctaaaacgaacaacaaattatcttt-aacttaaaatgatatttggtgtcaaacgg 39806058  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |  | |||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||    
T  39806057 tttgtgatatcgcactagtccctaagaagacgatataaatacttaccattgtttgatgcaaaaatactacatca 39805984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 23251396 - 23251309
Alignment:
Q  83 aaacaaacaatcaacta-tcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgata 169  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  23251396 aaacaaacaaacaactactcttttaacttcgaatgatatttggtgtcgaacggtccgtgatatcgcaatagtccctgaggagacgata 23251309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 27041164 - 27041109
Alignment:
Q  153 tccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  27041164 tccctgtggagacgatataaatacttactattgtttgatgcaaaaatactacatca 27041109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 103 - 171
Target Start/End: Original strand, 5357943 - 5358011
Alignment:
Q  103 tttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatata 171  Q
    ||||||||| |||| || ||| ||| |||||||||  ||||||||||||||||||||||||||||||||    
T  5357943 tttaacttaaaatggtaattgatgttgaatggtccctgatatcgcactagtccctgaggagacgatata 5358011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 47646713 - 47646626
Alignment:
Q  83 aaacaaacaatcaacta-tcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgata 169  Q
    |||||||||| ||| || |||||||||||| ||||||| | | ||| ||| |||   |||||||||||||||||||||||||||||||    
T  47646713 aaacaaacaaccaattaatcttttaacttaaaatgatagtcgatgttgaacggtttacgatatcgcactagtccctgaggagacgata 47646626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 165; Significance: 5e-88; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 5110 - 5302
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  5110 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 5209  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  5210 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcagt 5302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 164; Significance: 2e-87; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 36005587 - 36005778
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  36005587 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 36005686  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  36005687 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcag 36005778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 7311466 - 7311276
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  7311466 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 7311367  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  7311366 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 7311276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 6464681 - 6464873
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  6464681 actctaatcctaacgagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 6464780  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  6464781 tatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcagt 6464873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 8013425 - 8013615
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  |||||    
T  8013425 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcgtttaacttgaaatga 8013524  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  8013525 tatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 8013615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 36076084 - 36075893
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||  |||||    
T  36076084 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactattgtttaacttgaaatga 36075985  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  36075984 tatttggtgtcgaacggtctgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcag 36075893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 41242221 - 41242411
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||  || ||    
T  41242221 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaatcaactatcatttaacttgaaaaga 41242320  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  41242321 tatttggtgtcaaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 41242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 36021904 - 36022096
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||| ||||  ||||    
T  36021904 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaattcagttactaaaacaaacaaacaacttatctttttacttgaaatg 36022003  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36022004 ataattggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatcag 36022096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 11358298 - 11358489
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||||| ||||| |||||    
T  11358298 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaattgagttactaaaacaaacaaccaattatctttttaacttggaatg 11358397  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  11358398 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 11358489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 12768861 - 12768671
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||| ||||||||||||  || |||| |||||||||||||||    
T  12768861 actctaatcctaacaagtttcacgccttattaatctcaactttatcatttgcaatttagttattaaaacaaacaacgaattatcatttaacttagaatga 12768762  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12768761 tatttggtgtcgaacggtccgtgatatcgcactagtctctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 12768671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 36425835 - 36426028
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttt-aacttagaatg 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| |||||||| ||||| |||||    
T  36425835 actctaatcctaacaagtttcacgccctattaatctcaattttatcgtttgcaaatgagttactaaaacaaacaaccaattatctttttaacttggaatg 36425934  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcagt 210  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  36425935 gtatttggtgtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatacaacatcagt 36426028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 132; E-Value: 3e-68
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 1238331 - 1238140
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaact-atcttttaacttagaatg 116  Q
    ||||||||||||||||||||||||| |||||| |||||| |||  | ||| |||||||||||||||||||||||| ||| | || |||||||||||||||    
T  1238331 actctaatcctaacaagttttacgctctattactctcaacttttactttttcaatttagttactaaaacaaacaaacaaattattttttaacttagaatg 1238232  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1238231 atatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatacaaatacttacaattgtttgatgcaaaaatattacatca 1238140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 18 - 209
Target Start/End: Original strand, 16710773 - 16710965
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatca-actatcttttaacttagaatg 116  Q
    |||||||||||||||||||||| ||||||||  |||||| |||  | || ||||||||||||||||||||||||| || ||||||||| |||||||||||    
T  16710773 actctaatcctaacaagttttatgccctattgctctcaacttttactttagcaatttagttactaaaacaaacaaacatactatctttcaacttagaatg 16710872  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  16710873 atatttggagtcgaacggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatcag 16710965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 15012505 - 15012314
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| || |||||||| |||||| |||  |  |||||| ||||| ||||||||||||||  || ||||||||||||||||||||    
T  15012505 actctaatcctaacaagtttcacaccctattactctcaacttttactcttgcaacttagtaactaaaacaaacaacaaattatcttttaacttagaatga 15012406  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||    
T  15012405 tatttggtgtcgagtggtccgtgatatcgcactagtccctgaggagacgatataaatacttactattgtgtgatgcaaaaatactacatcag 15012314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 71 - 209
Target Start/End: Original strand, 7934084 - 7934223
Alignment:
Q  71 atttagttactaaaacaaacaatcaactatcttttaac-ttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgata 169  Q
    |||| ||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  7934084 atttggttactaaaacaaaccatcaactatcgtttaaccttagaatgatatttggtgtcgaacggtccgcaatatcgcactagtccctgaggagacgata 7934183  T
Q  170 taaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  7934184 taaatacttactattgtttgatgcaaaaatactacatcag 7934223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 59 - 208
Target Start/End: Complemental strand, 31017475 - 31017326
Alignment:
Q  59 ttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctg 158  Q
    |||| ||| |||| || |||||||||||||||||  || |||||||||||||| ||||||||||||||||||| ||||   |||||||||||||||| |     
T  31017475 ttattattcgcaactttgttactaaaacaaacaacaaattatcttttaacttaaaatgatatttggtgtcgaacggtctatgatatcgcactagtccata 31017376  T
Q  159 aggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    | |||||||||||||||||||| |||||||||| |||||||| |||||||    
T  31017375 aagagacgatataaatacttactattgtttgatacaaaaatactacatca 31017326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 14393766 - 14393700
Alignment:
Q  103 tttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgata 169  Q
    ||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  14393766 tttaacttaaaatgatatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgata 14393700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 45068521 - 45068609
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatctttta 106  Q
    |||||||||||||||| |||||||   ||||| |||||| |||  |  |||||| ||||||||||||||||||||  || |||||||||    
T  45068521 actctaatcctaacaaattttacgttttattactctcaacttttactcttgcaacttagttactaaaacaaacaacaaattatctttta 45068609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 26250696 - 26250737
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattt 59  Q
    |||||||||||||||| ||| ||||| |||||||||||||||    
T  26250696 actctaatcctaacaaatttcacgccttattaatctcaattt 26250737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 12538883 - 12538951
Alignment:
Q  141 atatcgcactagtccctgaggagacgatata-aatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||| |||||| ||| |||||||||||| |||||||||  ||| |||||  |||||||||||||||    
T  12538883 atatcgcgctagtctctggggagacgatatacaatacttacttttgattgatagaaaaatattacatca 12538951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 131; Significance: 1e-67; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 18 - 208
Target Start/End: Complemental strand, 49807 - 49618
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || ||||||| ||||||||||||    
T  49807 actctaatcctaacaagttttacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcttt-aacttagaatga 49709  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||| |||| | |||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||    
T  49708 tatttggtgtcgaacggtctgtgatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaaaaatactacatca 49618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 55667 - 55599
Alignment:
Q  140 gatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||    
T  55667 gatatcgcactagtccctgaggagacgatacaaatacttactattgtttgatgcaacaatactacatca 55599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 128; Significance: 7e-66; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 8986 - 9177
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaa-ctatcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | || ||||||||||||||||||||||||| ||| |||||||| |||||||||||    
T  8986 actctaatcctaacaagttttacgccctattactctcaacttttactttagcaatttagttactaaaacaaacaaacaaactatctttcaacttagaatg 9085  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||| |||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  9086 atatttggagtcgaacggtccgcgatatcgcactagtccttgaggagacgatagaaatacttacaattatttgatgcaaaaatactacatca 9177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 2665 - 2846
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaa-tcaactatcttttaacttagaatg 116  Q
    |||||||||||||||||||||||||||||||| |||||| |||  | |||||||||||||||||||||||||||| | || |||||||||||||||||||    
T  2665 actctaatcctaacaagttttacgccctattactctcaacttttacttttgcaatttagttactaaaacaaacaaataaattatcttttaacttagaatg 2764  T
Q  117 atatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaa 198  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  2765 atatttggtgtcgaacggtccgtgatatcgcactagtccctgaggagacgatacaaatacttagtattgtttgatgcaaaaa 2846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 18 - 209
Target Start/End: Complemental strand, 15288 - 15097
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||||||||  ||| |||| ||||||||||||||||||||  || |||||||||| |||||||||    
T  15288 actctaatcctaacaagtttcacgccttattaatctcaattttactattcgcaacttagttactaaaacaaacaacaaattatcttttaagttagaatga 15189  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatcag 209  Q
    ||||| |||||||| |||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||    
T  15188 tattttgtgtcgaaaggtctgtgatatcgcactagtccctgaggagacgatataaatacttactattgtttaatgcaaaaatactacatcag 15097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 120; Significance: 4e-61; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 29 - 208
Target Start/End: Complemental strand, 100020 - 99841
Alignment:
Q  29 aacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtc 128  Q
    ||||||||| |||||||||||||||||| |||||||||||||| ||||||| | ||||||||||  || |||| ||||||||||||||||||||||||||    
T  100020 aacaagtttcacgccctattaatctcaactttatcatttgcaacttagttattcaaacaaacaacaaattatcgtttaacttagaatgatatttggtgtc 99921  T
Q  129 gaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||| ||||||||||||||||| |||||||||| |||||||| |||||||||| ||||||||||||||||||| |||||||    
T  99920 gaacggtccgcgatatcgcacaagtccctgagaagacgatacaaatacttactattgtttgatgcaaaaatactacatca 99841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 117; Significance: 2e-59; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 18 - 206
Target Start/End: Complemental strand, 2762 - 2574
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||||||  ||||||| | ||||||||||  || |||| |||||||||||||||    
T  2762 actctaatcctaacaagtttcacgccttattaatctcaactttatcatttgcagcttagttattcaaacaaacaacaaattatcgtttaacttagaatga 2663  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacat 206  Q
    |||||||||||||| |||| | | |||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||    
T  2662 tatttggtgtcgaacggtctgtggtatcgcactagtccctgaggagacgatagaaatacttactattgtttgatgcaaaaatactacat 2574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0936 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0936
Description:

Target: scaffold0936; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 18 - 208
Target Start/End: Original strand, 3369 - 3558
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatga 117  Q
    |||||||||||||||||||| ||||| |||||||||||| |||  |  |||||| ||||||||||||||||||||  ||  |||||| ||||||||||||    
T  3369 actctaatcctaacaagtttcacgccttattaatctcaacttttactcttgcaacttagttactaaaacaaacaacaaatcatcttt-aacttagaatga 3467  T
Q  118 tatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||| ||||||||||||||| |||||||||||| || ||||||||||||||||| ||||| | ||||||||||||||||||| |||||||    
T  3468 tatttagtgtcgaatggtccgtgatatcgcactaatctctgaggagacgatataactacttgctattgtttgatgcaaaaatactacatca 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513 (Bit Score: 101; Significance: 8e-50; HSPs: 2)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 73 - 208
Target Start/End: Complemental strand, 12013 - 11877
Alignment:
Q  73 ttagttactaaaacaaacaatcaa-ctatcttttaacttagaatgatatttggtgtcgaatggtccgcgatatcgcactagtccctgaggagacgatata 171  Q
    |||||||||||||||||||| ||| |||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |    
T  12013 ttagttactaaaacaaacaaacaaactatctttcaacttagaatgatatttggagtcgaacggtccgcgatatcgcactagtccctgaggagacgataca 11914  T
Q  172 aatacttacaattgtttgatgcaaaaatattacatca 208  Q
    ||||||||||||| ||||||||||||||| |||||||    
T  11913 aatacttacaattatttgatgcaaaaatactacatca 11877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0513; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 12050 - 12014
Alignment:
Q  18 actctaatcctaacaagttttacgccctattaatctc 54  Q
    |||||||||||||||||||||||||||||||| ||||    
T  12050 actctaatcctaacaagttttacgccctattactctc 12014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 86; Significance: 8e-41; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 35 - 208
Target Start/End: Original strand, 24368 - 24541
Alignment:
Q  35 ttttacgccctattaatctcaattttatcatttgcaatttagttactaaaacaaacaatcaactatcttttaacttagaatgatatttggtgtcgaatgg 134  Q
    ||||||||| ||||| |||||| |||  |  |||||| || |||||||||||||||||  || | |||||||||||| |||||||||||||||||||  |    
T  24368 ttttacgccttattactctcaacttttactcttgcaactttgttactaaaacaaacaacaaattgtcttttaacttataatgatatttggtgtcgaacag 24467  T
Q  135 tccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    || | ||||||||||||||||||||||||||||||||||||||||  |||||||||||| |||||| |||||||    
T  24468 tctgtgatatcgcactagtccctgaggagacgatataaatacttaatattgtttgatgctaaaatactacatca 24541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 6987 - 6912
Alignment:
Q  133 ggtccgcgatatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  6987 ggtccgcgatatcgcactagtccctgaggagacgatataaatacttactattgtttgatgcaaaaatactacatca 6912  T

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Target: scaffold0045 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 2973 - 3040
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2973 atatcgcattagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 3040  T

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Target: scaffold0045; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 141 - 208
Target Start/End: Original strand, 9355 - 9422
Alignment:
Q  141 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatattacatca 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9355 atatcgcactagtccctgaggagacgatataaatacttacaattgtttgatgcaaaaatactacatca 9422  T

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