View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4255_low_20 (Length: 206)
Name: NF4255_low_20
Description: NF4255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4255_low_20 |
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Alignment Details
Target: chr5 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 40069592 - 40069657
Alignment:
| Q |
1 |
ctaaagcttcaactaataataatagtaaccacatatacctaagttgattttacgtaataaatagat |
66 |
Q |
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| T |
40069592 |
ctaaagcttcaactaataataatagtaaccacatatacctaagttgattttacgtaataaatagat |
40069657 |
T |
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Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 40069737 - 40069771
Alignment:
| Q |
148 |
ccgacaacaaaactttgtacttaacgcttatgtac |
182 |
Q |
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| T |
40069737 |
ccgacaacaaaactttgtacttaacgcttatgtac |
40069771 |
T |
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