View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4255_low_3 (Length: 562)
Name: NF4255_low_3
Description: NF4255
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4255_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 510; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 22 - 551
Target Start/End: Original strand, 43672206 - 43672735
Alignment:
| Q |
22 |
ccacttcacttccttaaaccttaaaacccacacaacatcttacaacgttcttctctcttatccattacactcttcactctccatgcactttaacgatggt |
121 |
Q |
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| T |
43672206 |
ccacttcatttccttaaaccttaaaacccacacaacatcttacaacgttcttctctcttatccattacactcttcactctccatgcactttaacgatggt |
43672305 |
T |
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| Q |
122 |
tcatcttccaaccttggattaaccgaaccgggttcatccggttcagacatggttcatgcctaccatgcttactcaccatccggttcagtttatgctaagg |
221 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
43672306 |
tcatcttccaaccttggattaaccgaaccgggttcatctggttcagacatggttcatgcctaccatgcttattcaccatccggttcagtttatgctaagg |
43672405 |
T |
|
| Q |
222 |
cggtgtttgtgaactacggaagagatagagactaccgtgcagttggcgtaagcattaagggatgtatagtgatagtaagaaaaggtggtggtttagggag |
321 |
Q |
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| T |
43672406 |
cggtgtttgtgaactacggaagagatagagactaccgtgcagttggcgtaagcattaagggatgtatagtgatagtaagaaaaggtggtggtttagggag |
43672505 |
T |
|
| Q |
322 |
gaacacggtggttgaaaaggctgaggaaaacggtgctgtagcggttctggtttataatgatgagaatgacacgtggcgtgatgggtttgagagaggtcac |
421 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
43672506 |
gaacacggtggttgaaaaggctgaggaaaacggtgctgtagcggttctagtttataatgatgagaatgacacgtggcgtaatgggtttgagagaggtcac |
43672605 |
T |
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| Q |
422 |
gtgatgaaaggtgtaggggacccacttagtcctggttggggtagtgttgaaggtagtgagaagttgagtttggatgataatgaagttttgaaaaggttcc |
521 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43672606 |
gtgatgaaaggtgtaggggacccacttagtcctggttggggtagtgttgaaggtagtgagaagttgagtttggatgataatgaagttttgaaaaggttcc |
43672705 |
T |
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| Q |
522 |
ctaaaattccatctatgccactctctgctc |
551 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
43672706 |
ctaaaattccatctatgccactctctgctc |
43672735 |
T |
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