View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4256_high_6 (Length: 427)
Name: NF4256_high_6
Description: NF4256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4256_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 21 - 421
Target Start/End: Original strand, 32889341 - 32889741
Alignment:
| Q |
21 |
ctcgtaatgatttaatgaagatttggttgctggccatgtcaactgtcactttggtcatggttggctctgcttacactggtccatccatgaacccagccaa |
120 |
Q |
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| T |
32889341 |
ctcgtaatgatttaatgaagatttggttgctggccatgtcaactgtcactttggtcatggttggctctgcttacactggtccatccatgaacccagccaa |
32889440 |
T |
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| Q |
121 |
tgtgagtttatacnnnnnnncattctttatataaatgttttaatgtgtgctactggaatgggtgtttggttatctgggaacttgattttaaatgattttg |
220 |
Q |
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| T |
32889441 |
tgtgagtttatactttttttcattctttatataaatgttttaatgtgtgctactggaatgggtgtttggttatctgggaacttgattttaaatgattttg |
32889540 |
T |
|
| Q |
221 |
nnnnnnngaaattcgattacgatatgaaatgttttaaagggaggcgtttatgtttaaatcacctttttgtttttccatgcacttgttacttgaataagtg |
320 |
Q |
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| T |
32889541 |
ttttttagaaattcgattacgatataaaatgttttaaagggaggtgtttatgtttaaatcacctttttgtttttccatgcacttgttacttgaataagtg |
32889640 |
T |
|
| Q |
321 |
tttggtcgatgtatatgtgaacttgatttcaaatgaagtttgttttttgtnnnnnnntggggctgaaaggaagtgagtatgataggagtaatattcttcg |
420 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32889641 |
tttggtcgatgtatatgtgaacttgatttcaaatgaagtttgttttttgtaaaaaaatggggctgaaaggaagtgagtatgataggagtaatattgttcg |
32889740 |
T |
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| Q |
421 |
a |
421 |
Q |
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| T |
32889741 |
a |
32889741 |
T |
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