View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4256_low_21 (Length: 280)

Name: NF4256_low_21
Description: NF4256
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4256_low_21
NF4256_low_21
[»] chr2 (35 HSPs)
chr2 (113-262)||(11541282-11541431)
chr2 (1-105)||(10249380-10249483)
chr2 (3-105)||(32505648-32505749)
chr2 (1-105)||(9058479-9058582)
chr2 (1-97)||(28863462-28863557)
chr2 (1-105)||(33436098-33436201)
chr2 (1-104)||(13438343-13438445)
chr2 (1-104)||(40701478-40701580)
chr2 (1-105)||(7465733-7465836)
chr2 (1-104)||(17473020-17473122)
chr2 (1-104)||(27864704-27864806)
chr2 (1-104)||(28381653-28381755)
chr2 (1-105)||(5574486-5574589)
chr2 (1-105)||(20700814-20700917)
chr2 (1-105)||(30915462-30915565)
chr2 (3-104)||(4060685-4060785)
chr2 (1-97)||(19930818-19930913)
chr2 (1-97)||(40613900-40613995)
chr2 (1-105)||(38882809-38882914)
chr2 (1-74)||(38273140-38273213)
chr2 (1-97)||(38732361-38732456)
chr2 (1-97)||(42257200-42257295)
chr2 (5-97)||(2533131-2533221)
chr2 (1-97)||(26891502-26891597)
chr2 (1-105)||(33436210-33436313)
chr2 (3-57)||(3737989-3738043)
chr2 (5-97)||(43490128-43490219)
chr2 (1-56)||(36168883-36168938)
chr2 (1-62)||(2997485-2997546)
chr2 (1-74)||(13365382-13365455)
chr2 (1-62)||(17820002-17820063)
chr2 (1-57)||(3440025-3440081)
chr2 (1-62)||(45097733-45097794)
chr2 (1-53)||(3034981-3035033)
chr2 (1-53)||(3154193-3154245)
[»] chr7 (34 HSPs)
chr7 (1-104)||(38267040-38267142)
chr7 (1-105)||(7389388-7389491)
chr7 (1-104)||(19329842-19329944)
chr7 (1-97)||(3784002-3784097)
chr7 (1-105)||(8080381-8080484)
chr7 (1-105)||(19436185-19436288)
chr7 (1-105)||(36361911-36362014)
chr7 (1-104)||(4999512-4999614)
chr7 (1-105)||(3434561-3434664)
chr7 (1-105)||(36362025-36362128)
chr7 (1-105)||(38837216-38837319)
chr7 (1-105)||(40957706-40957809)
chr7 (1-104)||(35137533-35137635)
chr7 (1-97)||(3694374-3694469)
chr7 (1-55)||(32951491-32951545)
chr7 (1-74)||(8238242-8238315)
chr7 (1-97)||(21234408-21234503)
chr7 (1-97)||(35522883-35522978)
chr7 (1-97)||(18207187-18207281)
chr7 (1-97)||(38044204-38044299)
chr7 (1-97)||(39255922-39256016)
chr7 (9-97)||(46374808-46374895)
chr7 (1-43)||(11044238-11044280)
chr7 (1-62)||(36208214-36208275)
chr7 (1-97)||(22343368-22343463)
chr7 (1-97)||(41915748-41915843)
chr7 (1-55)||(16374822-16374876)
chr7 (1-63)||(27744307-27744369)
chr7 (37-105)||(10343597-10343664)
chr7 (1-97)||(26296651-26296746)
chr7 (1-67)||(2318241-2318307)
chr7 (3-97)||(7727913-7728006)
chr7 (1-74)||(46033799-46033872)
chr7 (1-97)||(40846111-40846206)
[»] chr8 (28 HSPs)
chr8 (1-105)||(14547921-14548024)
chr8 (1-104)||(504119-504221)
chr8 (1-104)||(12831047-12831149)
chr8 (1-104)||(23122595-23122697)
chr8 (1-104)||(15197333-15197435)
chr8 (1-97)||(10284629-10284724)
chr8 (1-104)||(34012294-34012396)
chr8 (1-104)||(40423941-40424043)
chr8 (3-105)||(37038478-37038579)
chr8 (1-104)||(1179938-1180040)
chr8 (1-103)||(5957831-5957932)
chr8 (1-105)||(44507085-44507188)
chr8 (1-63)||(8841430-8841492)
chr8 (1-97)||(15048180-15048274)
chr8 (1-57)||(9122231-9122287)
chr8 (1-97)||(10621085-10621180)
chr8 (1-97)||(43414579-43414674)
chr8 (1-97)||(16383384-16383479)
chr8 (1-105)||(4854861-4854964)
chr8 (1-97)||(16056399-16056494)
chr8 (1-97)||(17443832-17443927)
chr8 (1-97)||(34307223-34307318)
chr8 (1-57)||(42221561-42221617)
chr8 (1-55)||(15258927-15258981)
chr8 (1-97)||(24307791-24307886)
chr8 (20-97)||(14055609-14055685)
chr8 (1-97)||(30479472-30479567)
chr8 (1-57)||(38229474-38229530)
[»] chr4 (30 HSPs)
chr4 (1-105)||(48183047-48183150)
chr4 (1-104)||(41236347-41236449)
chr4 (1-105)||(480445-480548)
chr4 (1-105)||(50052426-50052529)
chr4 (1-104)||(11511460-11511562)
chr4 (1-105)||(29234243-29234346)
chr4 (1-104)||(6034044-6034146)
chr4 (5-104)||(54473535-54473633)
chr4 (1-105)||(29239885-29239988)
chr4 (1-105)||(42044365-42044468)
chr4 (1-104)||(3481654-3481756)
chr4 (1-105)||(23608234-23608337)
chr4 (1-105)||(24995105-24995208)
chr4 (1-97)||(31910199-31910294)
chr4 (1-57)||(41823928-41823984)
chr4 (3-104)||(50526171-50526271)
chr4 (1-57)||(29977931-29977987)
chr4 (1-97)||(53352564-53352658)
chr4 (2-96)||(28480267-28480360)
chr4 (2-96)||(28481142-28481235)
chr4 (2-96)||(28482017-28482110)
chr4 (1-97)||(19670714-19670809)
chr4 (1-97)||(40574786-40574881)
chr4 (1-57)||(48647724-48647780)
chr4 (1-62)||(17983741-17983802)
chr4 (1-62)||(50813890-50813951)
chr4 (1-97)||(47986215-47986310)
chr4 (1-97)||(55475198-55475293)
chr4 (1-97)||(55079711-55079807)
chr4 (1-97)||(32766965-32767060)
[»] chr6 (20 HSPs)
chr6 (1-104)||(32869678-32869780)
chr6 (1-104)||(17598554-17598656)
chr6 (1-97)||(22880656-22880751)
chr6 (1-105)||(6209463-6209566)
chr6 (1-105)||(11427615-11427720)
chr6 (1-97)||(31976255-31976350)
chr6 (1-104)||(29857827-29857929)
chr6 (1-97)||(23128125-23128220)
chr6 (1-92)||(31109398-31109488)
chr6 (1-105)||(15832576-15832679)
chr6 (1-97)||(15508022-15508117)
chr6 (1-97)||(15990040-15990135)
chr6 (1-97)||(30341358-30341453)
chr6 (1-103)||(946377-946478)
chr6 (1-62)||(28536486-28536545)
chr6 (1-97)||(31110759-31110852)
chr6 (1-57)||(4231594-4231650)
chr6 (1-104)||(31953028-31953130)
chr6 (1-105)||(12732481-12732584)
chr6 (1-49)||(30870068-30870116)
[»] chr3 (31 HSPs)
chr3 (1-104)||(53982011-53982113)
chr3 (1-105)||(54868893-54868996)
chr3 (1-104)||(33644200-33644302)
chr3 (1-105)||(17470404-17470507)
chr3 (1-105)||(49607413-49607516)
chr3 (1-97)||(52629307-52629402)
chr3 (1-105)||(27714889-27714992)
chr3 (1-104)||(8076393-8076495)
chr3 (1-103)||(31456690-31456791)
chr3 (1-105)||(11095353-11095454)
chr3 (1-97)||(26141530-26141625)
chr3 (1-97)||(33118849-33118944)
chr3 (1-97)||(48587089-48587184)
chr3 (1-97)||(30801731-30801826)
chr3 (1-105)||(24699952-24700055)
chr3 (1-93)||(26754706-26754797)
chr3 (1-105)||(35536625-35536728)
chr3 (18-105)||(36707439-36707525)
chr3 (1-97)||(11347920-11348015)
chr3 (1-57)||(20764913-20764969)
chr3 (1-97)||(41189762-41189857)
chr3 (1-57)||(51419358-51419414)
chr3 (1-104)||(14623837-14623939)
chr3 (1-105)||(8956761-8956864)
chr3 (1-49)||(9563053-9563101)
chr3 (1-97)||(47531872-47531967)
chr3 (1-103)||(13898053-13898154)
chr3 (1-54)||(11907420-11907473)
chr3 (1-62)||(36331327-36331388)
chr3 (1-51)||(48375704-48375754)
chr3 (1-105)||(35093584-35093687)
[»] chr1 (32 HSPs)
chr1 (3-105)||(2581914-2582015)
chr1 (1-104)||(9474874-9474976)
chr1 (1-104)||(27564733-27564835)
chr1 (5-105)||(38632323-38632422)
chr1 (1-97)||(44548374-44548469)
chr1 (1-105)||(50630457-50630560)
chr1 (1-104)||(3000319-3000421)
chr1 (5-104)||(48716284-48716382)
chr1 (1-105)||(8346386-8346489)
chr1 (1-105)||(38595153-38595256)
chr1 (1-104)||(47452318-47452420)
chr1 (3-105)||(51898683-51898784)
chr1 (1-97)||(32813254-32813349)
chr1 (1-105)||(41758804-41758907)
chr1 (1-104)||(43132-43234)
chr1 (1-97)||(5958998-5959093)
chr1 (1-73)||(13414791-13414863)
chr1 (5-97)||(26274439-26274530)
chr1 (4-104)||(37649198-37649297)
chr1 (5-97)||(44453986-44454077)
chr1 (3-55)||(11152378-11152430)
chr1 (1-97)||(49811525-49811620)
chr1 (1-97)||(50590998-50591093)
chr1 (1-74)||(45044558-45044631)
chr1 (5-105)||(23597093-23597192)
chr1 (1-57)||(26440780-26440836)
chr1 (3-55)||(48489348-48489400)
chr1 (3-57)||(3302533-3302587)
chr1 (8-55)||(44334175-44334222)
chr1 (3-57)||(6260916-6260970)
chr1 (1-74)||(37926436-37926509)
chr1 (1-97)||(41608491-41608586)
[»] chr5 (25 HSPs)
chr5 (1-105)||(13811651-13811754)
chr5 (1-97)||(18520882-18520977)
chr5 (1-105)||(36732940-36733043)
chr5 (1-105)||(2740273-2740376)
chr5 (1-104)||(35785199-35785301)
chr5 (1-104)||(40145407-40145509)
chr5 (1-104)||(33149636-33149738)
chr5 (3-104)||(14831814-14831914)
chr5 (5-104)||(42414304-42414402)
chr5 (1-97)||(28177782-28177877)
chr5 (1-97)||(35943890-35943985)
chr5 (1-97)||(6679705-6679800)
chr5 (3-57)||(31009034-31009088)
chr5 (1-97)||(15409608-15409703)
chr5 (5-55)||(31132392-31132442)
chr5 (1-97)||(3921263-3921358)
chr5 (1-97)||(26720523-26720618)
chr5 (1-97)||(26990272-26990367)
chr5 (1-103)||(36875610-36875702)
chr5 (12-49)||(41470425-41470462)
chr5 (1-97)||(2252166-2252261)
chr5 (1-57)||(21370050-21370106)
chr5 (2-73)||(38296233-38296304)
chr5 (1-55)||(39557515-39557569)
chr5 (1-97)||(39688895-39688990)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-104)||(4029-4131)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-97)||(10107-10202)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-104)||(927-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-104)||(927-1029)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-55)||(17102-17156)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-53)||(8861-8913)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-62)||(152539-152600)


Alignment Details
Target: chr2 (Bit Score: 146; Significance: 6e-77; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 113 - 262
Target Start/End: Original strand, 11541282 - 11541431
Alignment:
Q  113 taggaaaaagggggatatagaatgaaatatggggtcaatctatattccttgaactatctttcattataattctattttatgtgaaattttaacccacatg 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11541282 taggaaaaagggggatatagaatgaaatatggggtcaatctatattccttgaactatctttcattataattctattttctgtgaaattttaacccacatg 11541381  T
Q  213 ttattcgtgtgactaaggtaaacatttttactttaactcattgactgaac 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11541382 ttattcgtgtgactaaggtaaacatttttactttaactcattgactgaac 11541431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 10249380 - 10249483
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||| ||    
T  10249380 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattg-tcacctaagggtgtctatgtatcatt 10249478  T
Q  101 actct 105  Q
    |||||    
T  10249479 actct 10249483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 32505648 - 32505749
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttac 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||| |||||||||||||||||| ||||    
T  32505648 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattg-tcacctaagggtgtctatgtatcattac 32505746  T
Q  103 tct 105  Q
    |||    
T  32505747 tct 32505749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 9058582 - 9058479
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  9058582 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 9058484  T
Q  101 actct 105  Q
    |||||    
T  9058483 actct 9058479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28863557 - 28863462
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||||    
T  28863557 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatc 28863462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33436098 - 33436201
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  33436098 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 33436196  T
Q  101 actct 105  Q
    |||||    
T  33436197 actct 33436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 13438445 - 13438343
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | ||||| |||| |||||||||||||||||| ||    
T  13438445 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattg-tcacctaagggtgtctatgtatcatt 13438347  T
Q  101 actc 104  Q
    ||||    
T  13438346 actc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40701580 - 40701478
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||| ||    
T  40701580 agagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacctaagggtgtctatgtatcatt 40701482  T
Q  101 actc 104  Q
    ||||    
T  40701481 actc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 7465733 - 7465836
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||  |||||||||||||||||| ||    
T  7465733 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-catctaagggtgtctatgtatcatt 7465831  T
Q  101 actct 105  Q
    |||||    
T  7465832 actct 7465836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17473122 - 17473020
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||  |||||||||||||||||| ||    
T  17473122 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-catctaagggtgtctatgtatcatt 17473024  T
Q  101 actc 104  Q
    ||||    
T  17473023 actc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 27864806 - 27864704
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | ||||| ||| |||||| |||||||||||||||||||||| ||    
T  27864806 agagaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgc-cacataagggtgtctatgtatcatt 27864708  T
Q  101 actc 104  Q
    ||||    
T  27864707 actc 27864704  T

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Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 28381653 - 28381755
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || |||||| |||||| ||| |||||||||||||||||| ||    
T  28381653 agagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgc-cacctaagggtgtctatgtatcatt 28381751  T
Q  101 actc 104  Q
    ||||    
T  28381752 actc 28381755  T

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Target: chr2; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 5574486 - 5574589
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||| |||||| ||| |||| ||||||||||||| ||    
T  5574486 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgc-cacctaagagtgtctatgtatcatt 5574584  T
Q  101 actct 105  Q
    |||||    
T  5574585 actct 5574589  T

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Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 20700917 - 20700814
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  ||||| ||| |||||| ||||||||| |||||||||||| ||    
T  20700917 agagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgc-cacataaggatgtctatgtatcatt 20700819  T
Q  101 actct 105  Q
    |||||    
T  20700818 actct 20700814  T

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Target: chr2; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 30915565 - 30915462
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  30915565 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 30915467  T
Q  101 actct 105  Q
    |||||    
T  30915466 actct 30915462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 4060785 - 4060685
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttac 102  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||| | ||||||||| ||||| |||| |||||||||||||||||| ||||    
T  4060785 agaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattg-tcacctaagggtgtctatgtatcattac 4060687  T
Q  103 tc 104  Q
    ||    
T  4060686 tc 4060685  T

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Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 19930818 - 19930913
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | ||||| ||| |||||| ||| ||||||||||||||||||    
T  19930818 agagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgc-cacctaagggtgtctatgtatc 19930913  T

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Target: chr2; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40613900 - 40613995
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||| ||||| ||| |||||| ||| ||||| ||||||||||||    
T  40613900 agagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaggatgtctatgtatc 40613995  T

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Target: chr2; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 38882809 - 38882914
Alignment:
Q  1 agagaaagtgtgcttgtgcgggg---tccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||| ||||||||||||   |||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||| ||||||||||||||||||    
T  38882809 agagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgc-cacctaagggtgtctatgtatc 38882906  T
Q  98 gttactct 105  Q
     |||||||    
T  38882907 attactct 38882914  T

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Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 38273140 - 38273213
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgc 74  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||| | ||| ||| ||||||    
T  38273140 agagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgc 38273213  T

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Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38732456 - 38732361
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  |||| || |||||||||||||||||||| ||||  | | ||||| |||||||||||||| ||||||||    
T  38732456 agagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattg-tcacataagggtgtttatgtatc 38732361  T

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Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 42257295 - 42257200
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||| ||| | ||||||||||||||| ||||||| ||||| | | |||||| ||| ||| | ||||||||||||    
T  42257295 agagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgc-cacctaaagatgtctatgtatc 42257200  T

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Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 2533221 - 2533131
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||| | ||| ||||||||||||||||||||| ||| ||||| | | |||||| ||| ||||| ||||||||||||    
T  2533221 aaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgt-ggtgtcaaaggatgtattgc-cacttaaggatgtctatgtatc 2533131  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26891502 - 26891597
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||| ||||||||| || |||||||||||| || |||||||||||||||||||| || |  ||| |||||| ||| |||||||| |||||||||    
T  26891502 agagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgc-cacctaagggtggctatgtatc 26891597  T

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Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 33436313 - 33436210
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||   |||||| ||   ||||||||||||||| ||||||| ||||||||| |||||| ||  ||||| |||||||||||| ||    
T  33436313 agagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgc-catctaaggatgtctatgtatcatt 33436215  T
Q  101 actct 105  Q
    |||||    
T  33436214 actct 33436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 3738043 - 3737989
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||| |||||||||||||||||||| |||| || ||||||||||||||||||||    
T  3738043 agaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggt 3737989  T

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Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 43490219 - 43490128
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| ||||| |||| ||||||||| ||||||||    
T  43490219 aaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattg-tcacctaagggtgtttatgtatc 43490128  T

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Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36168938 - 36168883
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggg 56  Q
    ||||||||| ||||||||||||||||| ||| | |||||||| |||||||||||||    
T  36168938 agagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtggg 36168883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2997485 - 2997546
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||    
T  2997485 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaa 2997546  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13365455 - 13365382
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgc 74  Q
    ||||||||||| |||||||||||||||  ||   || |||||||||||||||||||| ||||  ||||||||||    
T  13365455 agagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgc 13365382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17820002 - 17820063
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    ||||||| |||| ||||| ||||||||||| || || |||||||||||||||||||| ||||    
T  17820002 agagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaa 17820063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3440081 - 3440025
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||| |||||||||||||||||||||| |  || ||| ||||||||||||||||    
T  3440081 agagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggt 3440025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 45097733 - 45097794
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||| ||||| ||||    
T  45097733 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaa 45097794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3034981 - 3035033
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgt 53  Q
    ||||||||| | |||||||||||||||  |||| || ||||||||||||||||    
T  3034981 agagaaagtatacttgtgcggggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 3154245 - 3154193
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgt 53  Q
    ||||||| |||| ||| ||||| |||| ||||| |||||||||||||||||||    
T  3154245 agagaaactgtgtttgggcgggatccatgtgaccacgtgtcagatttttgtgt 3154193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 1e-37; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 38267142 - 38267040
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| ||||||||||||||||||||||| ||    
T  38267142 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg-tcacataagggtgtctatgtatcatt 38267044  T
Q  101 actc 104  Q
    ||||    
T  38267043 actc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7389491 - 7389388
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  || |||||| ||| |||||||||||||||||| ||    
T  7389491 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgc-cacctaagggtgtctatgtatcatt 7389393  T
Q  101 actct 105  Q
    |||||    
T  7389392 actct 7389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 19329944 - 19329842
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||| ||||| |||||||||||| ||    
T  19329944 agagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacctaaggatgtctatgtatcatt 19329846  T
Q  101 actc 104  Q
    ||||    
T  19329845 actc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3784097 - 3784002
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| | |||||| ||| ||||||||||||||||||    
T  3784097 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgc-cacctaagggtgtctatgtatc 3784002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8080381 - 8080484
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  8080381 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 8080479  T
Q  101 actct 105  Q
    |||||    
T  8080480 actct 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 19436185 - 19436288
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||| ||||| |||||||||||| ||    
T  19436185 agagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattg-tcacctaaggatgtctatgtatcatt 19436283  T
Q  101 actct 105  Q
    |||||    
T  19436284 actct 19436288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36361911 - 36362014
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | | |||||| ||| |||||||||||||||||| ||    
T  36361911 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgc-cacctaagggtgtctatgtatcatt 36362009  T
Q  101 actct 105  Q
    |||||    
T  36362010 actct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 4999512 - 4999614
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||| ||  |||||||||||||||||| ||    
T  4999512 agagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgc-catctaagggtgtctatgtatcatt 4999610  T
Q  101 actc 104  Q
    ||||    
T  4999611 actc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 3434664 - 3434561
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| ||| |||||| ||| ||||| |||||||||||| ||    
T  3434664 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgc-cacctaaggatgtctatgtatcatt 3434566  T
Q  101 actct 105  Q
    |||||    
T  3434565 actct 3434561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 36362128 - 36362025
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| | | |||| | ||| |||||||||||||||||| ||    
T  36362128 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattac-cacctaagggtgtctatgtatcatt 36362030  T
Q  101 actct 105  Q
    |||||    
T  36362029 actct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 38837319 - 38837216
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || ||| |||||| ||| |||||||||||||||||| ||    
T  38837319 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgc-cacctaagggtgtctatgtatcatt 38837221  T
Q  101 actct 105  Q
    |||||    
T  38837220 actct 38837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 40957809 - 40957706
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  || |||||| ||| |||| ||||||||||||| ||    
T  40957809 agagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgc-cacctaagagtgtctatgtatcatt 40957711  T
Q  101 actct 105  Q
    |||||    
T  40957710 actct 40957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35137635 - 35137533
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||| ||| ||||||||||||| |||| ||    
T  35137635 agagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatttatcatt 35137537  T
Q  101 actc 104  Q
    ||||    
T  35137536 actc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 3694469 - 3694374
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| | ||||||| ||||| |||| ||||||||| ||| ||||    
T  3694469 agagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattg-tcacctaagggtgtgtatatatc 3694374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32951491 - 32951545
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32951491 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgg 32951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8238315 - 8238242
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgc 74  Q
    ||||||||||| |||||||||||||||  ||||||| |||||||||||||||||||| ||||| ||| ||||||    
T  8238315 agagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgc 8238242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 21234503 - 21234408
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||| |||||||||||||||| || ||| |||||||||| ||||||||||| || ||||| ||| ||||| |||| ||||| ||||||||||||    
T  21234503 agagaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattg-tcacctaaggatgtctatgtatc 21234408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 35522978 - 35522883
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||| ||||  || | ||||||||||||||||||||||| | ||| ||| |||||| ||| ||||| ||||||||||||    
T  35522978 agagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgc-cacttaaggatgtctatgtatc 35522883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 18207281 - 18207187
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||| ||||| |||||| | |||||| |||||||||| ||||| |||| |||| |||||| ||| ||||| ||||||||||||    
T  18207281 agagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaagaggtgtattgc-cacctaaggttgtctatgtatc 18207187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 38044299 - 38044204
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || |||| |||||||||||||||||| | ||||  ||| |||||| ||| ||||||||| ||||||||    
T  38044299 agagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 38044204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39255922 - 39256016
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||| || ||||||||| | ||||||||||||||||| ||||||||||  ||| |||||| ||| ||||| ||||||||||||    
T  39255922 agagaaagtgttcttgtgtggagtccacgtgcc-acgtgtcagatttttgtatgggtatcaagtggtgtattgc-cacctaaggttgtctatgtatc 39256016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 97
Target Start/End: Original strand, 46374808 - 46374895
Alignment:
Q  9 tgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||| ||| | ||||||||||||||||||||||| | ||| ||| | |||| ||| ||||| ||||||||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgc-cacctaaggatgtctatgtatc 46374895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 11044280 - 11044238
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcag 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  11044280 agagaaagtgtacttgtgcggggtccacgtgactacgtgtcag 11044238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 36208275 - 36208214
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    ||||||| ||||||||||| ||||||||||||| || |||||| ||||||||||||| ||||    
T  36208275 agagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaa 36208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 22343463 - 22343368
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  ||   || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  22343463 agagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 22343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 41915843 - 41915748
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||| ||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  41915843 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 41915748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16374822 - 16374876
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    |||||| ||||||||||| | | |||||||||| |||||||||||||||||||||    
T  16374822 agagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtgg 16374876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 27744307 - 27744369
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaa 63  Q
    ||||||| ||||||| || ||| |||||||| | || ||||||||||||||||||||||||||    
T  27744307 agagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaaa 27744369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 10343597 - 10343664
Alignment:
Q  37 gtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttactct 105  Q
    ||||||||||||||||||||| |||| | || |||| | ||| |||||||||||||||||| |||||||    
T  10343597 gtgtcagatttttgtgtgggtgtcaagatgtgtatttc-cacctaagggtgtctatgtatcattactct 10343664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26296746 - 26296651
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||| || ||||||||||||||||  || | |||| |||||||||| ||||| | | ||| ||||||||| |||| ||||| ||||||||||||    
T  26296746 agagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattg-tcacctaaggatgtctatgtatc 26296651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2318241 - 2318307
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggt 67  Q
    ||||||||| ||||| ||  ||||||||||||| ||  ||||||||||||||||||| |||| ||||    
T  2318241 agagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaagaggt 2318307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 7728006 - 7727913
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||| |||||||||||||||  |||| || |||||||||||| ||||  | |||| |||| |||| | ||| ||||||||| ||||||||    
T  7728006 agaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattac-cacctaagggtgtttatgtatc 7727913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 46033799 - 46033872
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgc 74  Q
    ||||||| | ||||||||||| || || ||||| ||||||||||||||| ||||||| | ||| ||| ||||||    
T  46033799 agagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgc 46033872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 40846111 - 40846206
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||  ||||||||||||||  | ||||| ||| |||||||||||||| | ||||  ||| |||||| ||| ||||| ||| ||||||||    
T  40846111 agagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgc-cacctaaggatgtttatgtatc 40846206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 9e-36; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 14548024 - 14547921
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  14548024 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgc-cacctaagggtgtctatgtatcttt 14547926  T
Q  101 actct 105  Q
    |||||    
T  14547925 actct 14547921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 504119 - 504221
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||| ||    
T  504119 agagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacctaagggtgtctatgtatcatt 504217  T
Q  101 actc 104  Q
    ||||    
T  504218 actc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 12831149 - 12831047
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||| |||||||||||||||||| ||    
T  12831149 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg-tcacctaagggtgtctatgtatcatt 12831051  T
Q  101 actc 104  Q
    ||||    
T  12831050 actc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23122595 - 23122697
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||| ||    
T  23122595 agagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacttaagggtgtctatgtatcatt 23122693  T
Q  101 actc 104  Q
    ||||    
T  23122694 actc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 15197435 - 15197333
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||| ||||||||||||| ||    
T  15197435 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagagtgtctatgtatcatt 15197337  T
Q  101 actc 104  Q
    ||||    
T  15197336 actc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10284629 - 10284724
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  || ||||| |||| ||||||||||||||||||    
T  10284629 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattg-tcacttaagggtgtctatgtatc 10284724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 34012294 - 34012396
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||| | ||| |||||||||||||||||| ||    
T  34012294 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattac-cacctaagggtgtctatgtatcatt 34012392  T
Q  101 actc 104  Q
    ||||    
T  34012393 actc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 40423941 - 40424043
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||| |||||| ||| ||||||| |||||||||| ||    
T  40423941 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgc-cacctaagggtatctatgtatcatt 40424039  T
Q  101 actc 104  Q
    ||||    
T  40424040 actc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 37038579 - 37038478
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttac 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||| | |||||||||||| ||||    
T  37038579 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaagatgtctatgtatcattac 37038481  T
Q  103 tct 105  Q
    |||    
T  37038480 tct 37038478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 1179938 - 1180040
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||| ||| |||| | ||| |||||||||||||||||| ||    
T  1179938 agagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattac-cacctaagggtgtctatgtatcatt 1180036  T
Q  101 actc 104  Q
    ||||    
T  1180037 actc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 5957932 - 5957831
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||  |||||||||||| ||    
T  5957932 agagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagaatgtctatgtatcatt 5957834  T
Q  101 act 103  Q
    |||    
T  5957833 act 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44507085 - 44507188
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| | |||  || |||| | ||| |||||||||||||||||| ||    
T  44507085 agagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattac-cacctaagggtgtctatgtatcatt 44507183  T
Q  101 actct 105  Q
    |||||    
T  44507184 actct 44507188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 8841430 - 8841492
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaa 63  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  8841430 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaa 8841492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15048180 - 15048274
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||||| ||| |||||| ||| ||||| ||||||||||||    
T  15048180 agagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgc-cacctaaggatgtctatgtatc 15048274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 9122287 - 9122231
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  9122287 agagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggt 9122231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10621085 - 10621180
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||| || | ||| ||||||||||||||||||||||||| ||||| ||| |||| | ||| ||||| ||||||||||||    
T  10621085 agagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattac-cacctaaggatgtctatgtatc 10621180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 43414579 - 43414674
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||| |||| ||||| |||||| |||||||||||||||| ||||| ||| | |||| ||  ||||| ||||||||||||    
T  43414579 agagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgc-catctaaggatgtctatgtatc 43414674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 16383479 - 16383384
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  16383479 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 16383384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 4854861 - 4854964
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||| ||||||| ||| | || | |||||||||| ||| ||| | ||| ||| |||||| ||| ||||| |||||||||||| ||    
T  4854861 agagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgc-cacctaaggatgtctatgtatcatt 4854959  T
Q  101 actct 105  Q
    |||||    
T  4854960 actct 4854964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 16056399 - 16056494
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  | | ||||| |||||||||| ||| ||||||||    
T  16056399 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattg-tcacataaggatgtttatgtatc 16056494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 17443927 - 17443832
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||  ||||| ||||||||| ||||||| ||||||||||||||||| || | || | || ||||| |||| ||||| ||||||||||||    
T  17443927 agagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattg-tcacctaaggttgtctatgtatc 17443832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 34307318 - 34307223
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||| ||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  34307318 agagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 34307223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42221617 - 42221561
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    |||||||||||||||||  ||||||||  ||| ||||||||||||||||||||||||    
T  42221617 agagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggt 42221561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15258927 - 15258981
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    ||||||| ||||||||||| ||||||||||||| || |||||||||||| |||||    
T  15258927 agagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtgg 15258981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 24307791 - 24307886
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || | |||||||||||||||||| ||||  | | |||||| ||| ||||||||| ||||||||    
T  24307791 agagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgc-cacctaagggtgtttatgtatc 24307886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 97
Target Start/End: Original strand, 14055609 - 14055685
Alignment:
Q  20 ggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||| ||| |||||||||||||| | ||||   || ||||| |||| |||||||||| |||||||    
T  14055609 ggggtccacgtgactacatgtaagatttttgtgtggatgtcaaggagtgtattg-tcacctaagggtgtcaatgtatc 14055685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30479472 - 30479567
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||| ||||||  |  | || |||||||||||| ||||| | ||||| ||| |||||| ||| ||||||||| ||||||||    
T  30479472 agagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgc-cacctaagggtgtttatgtatc 30479567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 38229530 - 38229474
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||| ||||||||| | |  |||||||||| || ||||||||||||||||||||    
T  38229530 agagaaaatgtgcttgtacagaatccacgtgaccacatgtcagatttttgtgtgggt 38229474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 9e-36; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 48183047 - 48183150
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  48183047 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacgtaagggtgtctatgtatcatt 48183145  T
Q  101 actct 105  Q
    |||||    
T  48183146 actct 48183150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 41236449 - 41236347
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||| ||| |||||||||||||||||| ||    
T  41236449 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgc-cacctaagggtgtctatgtatcatt 41236351  T
Q  101 actc 104  Q
    ||||    
T  41236350 actc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 480445 - 480548
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||| |||| |||||||||||||||||| ||    
T  480445 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattg-tcacctaagggtgtctatgtatcatt 480543  T
Q  101 actct 105  Q
    |||||    
T  480544 actct 480548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 50052426 - 50052529
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||| |||||||||||| ||    
T  50052426 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaggatgtctatgtatcatt 50052524  T
Q  101 actct 105  Q
    |||||    
T  50052525 actct 50052529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 11511460 - 11511562
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  11511460 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 11511558  T
Q  101 actc 104  Q
    ||||    
T  11511559 actc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 29234243 - 29234346
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||| |||||| ||  |||||||||||||||||| ||    
T  29234243 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgc-catctaagggtgtctatgtatcatt 29234341  T
Q  101 actct 105  Q
    |||||    
T  29234342 actct 29234346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6034146 - 6034044
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  6034146 agagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 6034048  T
Q  101 actc 104  Q
    ||||    
T  6034047 actc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 54473535 - 54473633
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttactc 104  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| ||||| |||| |||||||||||||||||| ||||||    
T  54473535 aaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattg-tcacctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29239988 - 29239885
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||| | ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  29239988 agagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgc-cacctaagggtgtctatgtatcatt 29239890  T
Q  101 actct 105  Q
    |||||    
T  29239889 actct 29239885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 42044365 - 42044468
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |  || | | |||||| ||| |||||||||||||||||| ||    
T  42044365 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgc-cacctaagggtgtctatgtatcatt 42044463  T
Q  101 actct 105  Q
    |||||    
T  42044464 actct 42044468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3481756 - 3481654
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||  || |||||| ||| ||| |||||||||||||| ||    
T  3481756 agagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgc-cacctaaaggtgtctatgtatcatt 3481658  T
Q  101 actc 104  Q
    ||||    
T  3481657 actc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 23608337 - 23608234
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| || || |||||||||||||||||||||||||||||||| ||||| ||| ||||| |||  ||||||||||||| |||| ||    
T  23608337 agagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattg-tcatctaagggtgtctatatatcatt 23608239  T
Q  101 actct 105  Q
    |||||    
T  23608238 actct 23608234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24995105 - 24995208
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||||| ||| |||||| ||  |||||||||| || |||| ||    
T  24995105 agagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgc-catctaagggtgtccatatatcatt 24995203  T
Q  101 actct 105  Q
    |||||    
T  24995204 actct 24995208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31910294 - 31910199
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||| |||||  || ||||| |||| ||||| ||||||||||||    
T  31910294 agagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattg-tcacctaaggatgtctatgtatc 31910199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 41823984 - 41823928
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  41823984 agagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggt 41823928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 50526171 - 50526271
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttac 102  Q
    |||||| ||||||||||||  |||||||||| ||||||||||||||||||||||| ||||| ||| |||||| ||| ||| | |||||||||||| ||||    
T  50526171 agaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaagatgtctatgtatcattac 50526269  T
Q  103 tc 104  Q
    ||    
T  50526270 tc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29977987 - 29977931
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||    
T  29977987 agagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggt 29977931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 53352564 - 53352658
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||||||| ||| | |||   | |||||  ||| ||||||||||||||||||    
T  53352564 agagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg--cacctaagggtgtctatgtatc 53352658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 28480267 - 28480360
Alignment:
Q  2 gagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtat 96  Q
    ||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||| || | || | || ||||| |||| ||||| |||||||||||    
T  28480267 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattg-tcacctaaggttgtctatgtat 28480360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 28481142 - 28481235
Alignment:
Q  2 gagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtat 96  Q
    ||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||| || | || | || ||||| |||| ||||| |||||||||||    
T  28481142 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattg-tcacctaaggttgtctatgtat 28481235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 96
Target Start/End: Original strand, 28482017 - 28482110
Alignment:
Q  2 gagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtat 96  Q
    ||||||||||| ||||| ||||||||| ||||||| ||||||||||||||||| || | || | || ||||| |||| ||||| |||||||||||    
T  28482017 gagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaagaagtgtattg-tcacctaaggttgtctatgtat 28482110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 19670714 - 19670809
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || ||||||||||||||||| || ||||  ||| |||||| ||| ||||||||| ||||||||    
T  19670714 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 19670809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 40574881 - 40574786
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||| |||| |||| ||  |  |||||||||||||||||||||| ||||| ||| |||| | ||| ||||| ||||||||||||    
T  40574881 agagaaagtgtgcttgttcgggatccatgtagcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattac-cacctaaggatgtctatgtatc 40574786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 48647724 - 48647780
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||| ||||||||||||| ||||||||||| |||||| |||||||| |||||||    
T  48647724 agagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggt 48647780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 17983741 - 17983802
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||    
T  17983741 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaa 17983802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 50813890 - 50813951
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    ||||||||||| |||||||||||| ||  |||| || |||||||||||||||||||| ||||    
T  50813890 agagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaa 50813951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 47986310 - 47986215
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||| | ||||  | | |||||| ||| ||||||||| ||||||||    
T  47986310 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgc-cacctaagggtgtttatgtatc 47986215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 55475293 - 55475198
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| ||| ||| |||||||  || | || |||||||||||||||||||| ||||| ||| |||||| ||| ||||| ||| ||||||||    
T  55475293 agagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaggatgtttatgtatc 55475198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 55079711 - 55079807
Alignment:
Q  1 agagaaagtgtgcttgtgcgggg-tccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||| |||| ||||  || | || |||||||||||||| ||||| |||| |||| |||||| ||| ||||||||| ||||||||    
T  55079711 agagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaagaggtgtattgc-cacctaagggtgtttatgtatc 55079807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32767060 - 32766965
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| ||||||| |||||||  || | || |||||||||||||| ||||| ||||  ||| |||||| ||| |||| |||| ||||||||    
T  32767060 agagaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgc-cacctaagagtgtttatgtatc 32766965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 32869780 - 32869678
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  32869780 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcttt 32869682  T
Q  101 actc 104  Q
    ||||    
T  32869681 actc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 17598656 - 17598554
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| | |||||| ||| |||||||||||||||||| ||    
T  17598656 agagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgc-cacctaagggtgtctatgtatcatt 17598558  T
Q  101 actc 104  Q
    ||||    
T  17598557 actc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 22880656 - 22880751
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||| ||| ||||||||||||||||||    
T  22880656 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatc 22880751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 6209463 - 6209566
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||| || |||||  || |||||| ||| |||||||||||||||||| ||    
T  6209463 agagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgc-cacctaagggtgtctatgtatcatt 6209561  T
Q  101 actct 105  Q
    |||||    
T  6209562 actct 6209566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 11427720 - 11427615
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacata--agggtgtctatgtatcg 98  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| | | |||||| ||| ||  ||||||||||||||||     
T  11427720 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgc-cacctaagagggtgtctatgtatca 11427622  T
Q  99 ttactct 105  Q
    |||||||    
T  11427621 ttactct 11427615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 31976350 - 31976255
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||||| || ||||| ||||||||||||||||||||||| | ||| |||||||||| ||| ||||| ||||||||||||    
T  31976350 agagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgc-cacctaaggatgtctatgtatc 31976255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 29857929 - 29857827
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| | ||||||| |||||| ||  ||| |||||||||||||| ||    
T  29857929 agagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgc-catctaaaggtgtctatgtatcatt 29857831  T
Q  101 actc 104  Q
    ||||    
T  29857830 actc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 23128125 - 23128220
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| | | ||||  |||||||| ||||||||| ||||    
T  23128125 agagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtatt-atcacataaaggtgtctatatatc 23128220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 31109398 - 31109488
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctat 92  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||| | ||||| ||| |||||| ||| |||||||||||||    
T  31109398 agagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgc-cacctaagggtgtctat 31109488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 15832679 - 15832576
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||| |||  |||||| || ||||||||||||||||||| |||||||||||||| ||||| | | ||||| |||| ||| |||||||||||||| ||    
T  15832679 agagaaaatgtatttgtgcaggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaatgatttattg-tcacctaaaggtgtctatgtatcatt 15832581  T
Q  101 actct 105  Q
    |||||    
T  15832580 actct 15832576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15508022 - 15508117
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  15508022 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 15508117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15990040 - 15990135
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  15990040 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 15990135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30341358 - 30341453
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  30341358 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 30341453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 946478 - 946377
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||| | ||||| |  ||||||||| |||||||||||||| || ||| ||||| ||| ||||  |||| ||||| |||||||||||||||    
T  946478 agagaaagtgtgctagagcgggatttacgtgactaggtgtcagatttttgggtaggtgtcaaagggtgtatt-atcacctaaggatgtctatgtatcgtt 946380  T
Q  101 act 103  Q
    |||    
T  946379 act 946377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28536486 - 28536545
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    |||||||||||||||||| ||||||||| ||||  |||||||||||||||||||||| ||||    
T  28536486 agagaaagtgtgcttgtgtggggtccacatgac--cgtgtcagatttttgtgtgggtgtcaa 28536545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 31110759 - 31110852
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||| ||||||| |||  |||||||||||||||  |||| || ||||| ||| |||||| ||| ||||| ||||||||||||    
T  31110759 agagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgc-cacctaaggatgtctatgtatc 31110852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4231650 - 4231594
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||||||| |||||||||||||||  || | |||||||||||||||||||||||    
T  4231650 agagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggt 4231594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 31953028 - 31953130
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| ||||| | ||||||| |||  || |||||||||||| ||||||| ||||  ||| |||||| ||| ||||| ||||||| |||| ||    
T  31953028 agagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgc-cacctaaggatgtctatctatcatt 31953126  T
Q  101 actc 104  Q
    ||||    
T  31953127 actc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 12732584 - 12732481
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||| ||||||| || ||| ||||| |  | ||||||||||||||||||||||| ||||    |||||||| ||| ||||  |||||||||||| ||    
T  12732584 agagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaatgattatattgc-cacttaagaatgtctatgtatcatt 12732486  T
Q  101 actct 105  Q
    |||||    
T  12732485 actct 12732481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30870116 - 30870068
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt 49  Q
    ||||||| ||||||||||||||||||| ||||| || ||| ||||||||    
T  30870116 agagaaaatgtgcttgtgcggggtccatgtgaccacatgttagattttt 30870068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 53982113 - 53982011
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  53982113 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 53982015  T
Q  101 actc 104  Q
    ||||    
T  53982014 actc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 54868893 - 54868996
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||| ||    
T  54868893 agagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacctaagggtgtctatgtatcatt 54868991  T
Q  101 actct 105  Q
    |||||    
T  54868992 actct 54868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 33644302 - 33644200
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| |||  ||||||||||||||||| ||    
T  33644302 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacccaagggtgtctatgtatcatt 33644204  T
Q  101 actc 104  Q
    ||||    
T  33644203 actc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 17470507 - 17470404
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||| |||||| ||| ||| |||||||||||||| ||    
T  17470507 agagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgc-cacctaaaggtgtctatgtatcatt 17470409  T
Q  101 actct 105  Q
    |||||    
T  17470408 actct 17470404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 49607516 - 49607413
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  49607516 agagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 49607418  T
Q  101 actct 105  Q
    |||||    
T  49607417 actct 49607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 52629402 - 52629307
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||||    
T  52629402 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatc 52629307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 27714889 - 27714992
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||| | ||| ||| |||||||||||||| ||    
T  27714889 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattac-cacctaaaggtgtctatgtatcatt 27714987  T
Q  101 actct 105  Q
    |||||    
T  27714988 actct 27714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8076495 - 8076393
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||| || ||| ||| ||||||||| |||||||| ||    
T  8076495 agagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgc-cacctaagggtgtttatgtatcatt 8076397  T
Q  101 actc 104  Q
    ||||    
T  8076396 actc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 31456791 - 31456690
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||| | | || ||||||||||||||| ||    
T  31456791 agagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cgcctatgggtgtctatgtatcatt 31456693  T
Q  101 act 103  Q
    |||    
T  31456692 act 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 11095353 - 11095454
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| || ||||||||  ||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  11095353 agagaaagtgtgtttatgcggggt--acgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 11095449  T
Q  101 actct 105  Q
    |||||    
T  11095450 actct 11095454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 26141530 - 26141625
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||| | ||| ||| |||||| ||| ||||| ||||||||||||    
T  26141530 agagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgc-cacctaaggatgtctatgtatc 26141625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 33118849 - 33118944
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||| || || ||| ||||||||||||||||||| |||||||||||||| ||||| ||| ||||| |||| ||||||||||||||||||    
T  33118849 agagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattg-tcacctaagggtgtctatgtatc 33118944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 48587089 - 48587184
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||| ||| ||| ||||| ||| |||||| ||| ||||||| ||||||||||    
T  48587089 agagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgc-cacctaagggtatctatgtatc 48587184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 30801731 - 30801826
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||| |||||||||| ||||||||  ||||||| ||||| |||||||||||||||||||| ||| ||||  |||| ||||||||||||||||||    
T  30801731 agagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtatt-atcacctaagggtgtctatgtatc 30801826  T

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Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 24699952 - 24700055
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| |||| | ||||||||||| | ||||| ||||||||| ||||||| ||||||||| |||||| ||  ||||| |||||||||||| ||    
T  24699952 agagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgc-caactaaggatgtctatgtatcatt 24700050  T
Q  101 actct 105  Q
    |||||    
T  24700051 actct 24700055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 26754797 - 26754706
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatg 93  Q
    ||||||| ||||||||||||||||||| ||||| || |||||||||||||||||| | || || ||| |||||| ||| ||||||||||||||    
T  26754797 agagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgc-cacctaagggtgtctatg 26754706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35536728 - 35536625
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||| |||||||||||||   ||||||| |||| |||||||| |||||| ||||||| ||||| ||| |||||| ||||||||| |||||||||||| ||    
T  35536728 agaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaaatggtgtattgc-cacataaggatgtctatgtatcatt 35536630  T
Q  101 actct 105  Q
    |||||    
T  35536629 actct 35536625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 36707439 - 36707525
Alignment:
Q  18 gcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttactct 105  Q
    ||||| ||||||| |||||||||||||||||||||||| | ||||| ||| ||||| |||| ||||||| |||||||||| |||||||    
T  36707439 gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattg-tcacctaagggtatctatgtatcattactct 36707525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 11347920 - 11348015
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||| ||| ||||||| ||| | ||||||||||||||||||||| | ||||| | | ||||| |||| ||||| ||||||||||||    
T  11347920 agagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattg-tcacctaaggatgtctatgtatc 11348015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 20764913 - 20764969
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||||||||||||| ||||||||| ||| | |||||||||||||||||||||||    
T  20764913 agagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggt 20764969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41189762 - 41189857
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||| ||| | |||||||| |||||| ||||||| ||||| | | |||||| ||| ||||| ||| ||||||||    
T  41189762 agagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgc-cacctaaggatgtatatgtatc 41189857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 51419358 - 51419414
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||||||||||||||||||||| | ||| | |||||||||||||||||||||||    
T  51419358 agagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggt 51419414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 14623837 - 14623939
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| | ||||||| |||  || |||||||||||| ||||||| ||||  ||| |||||| ||| ||||| |||||||||||| ||    
T  14623837 agagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgc-cacctaaggatgtctatgtatcatt 14623935  T
Q  101 actc 104  Q
    ||||    
T  14623936 actc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8956864 - 8956761
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||| |||||||||||||   ||||||| |||  |||||||| |||||| ||||||| ||||| | | |||||| ||||||||| |||||||||||| ||    
T  8956864 agaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaaaggatgtattgc-cacataaggatgtctatgtatcatt 8956766  T
Q  101 actct 105  Q
    |||||    
T  8956765 actct 8956761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9563101 - 9563053
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagattttt 49  Q
    |||||||||||| |||||| || ||||||||||||||||||||||||||    
T  9563101 agagaaagtgtgtttgtgcaggatccacgtgactacgtgtcagattttt 9563053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 47531967 - 47531872
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||||| ||  || | |||||||||||| |||||||| | | ||||||| |||||| ||  ||||| ||||||||||||    
T  47531967 agagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgc-catctaaggatgtctatgtatc 47531872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13898053 - 13898154
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||| | ||||||| |||  ||||||||||||||| ||||||| ||||  ||| |||||| ||| ||||| ||| ||| |||| ||    
T  13898053 agagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgc-cacctaaggatgtttatctatcatt 13898151  T
Q  101 act 103  Q
    |||    
T  13898152 act 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11907473 - 11907420
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtg 54  Q
    ||||||| |||||||||||||||||||  |||| || |||||||||||||||||    
T  11907473 agagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtg 11907420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 36331327 - 36331388
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||    
T  36331327 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaa 36331388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 48375704 - 48375754
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgt 51  Q
    ||||||| ||||||||||||||||||| ||||| ||  |||||||||||||    
T  48375704 agagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgt 48375754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 35093687 - 35093584
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||  || || ||| |||| || ||||||||||||| |||| | ||||| | | ||||| |||| ||| | ||||||||||||||     
T  35093687 agagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaaatgttgtattg-tcacctaaagttgtctatgtatcgta 35093589  T
Q  101 actct 105  Q
    |||||    
T  35093588 actct 35093584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 105
Target Start/End: Complemental strand, 2582015 - 2581914
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttac 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||||    
T  2582015 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcattac 2581917  T
Q  103 tct 105  Q
    |||    
T  2581916 tct 2581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 9474874 - 9474976
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  9474874 agagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 9474972  T
Q  101 actc 104  Q
    ||||    
T  9474973 actc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 27564733 - 27564835
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||| ||| ||||| |||||||||||| ||    
T  27564733 agagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacctaaggatgtctatgtatcatt 27564831  T
Q  101 actc 104  Q
    ||||    
T  27564832 actc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 38632323 - 38632422
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttactc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| |||||| ||| |||||||||||||||||| ||||||    
T  38632323 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgc-cacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 44548374 - 44548469
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||| ||| | ||||||||||||    
T  44548374 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgc-cacctaaagatgtctatgtatc 44548469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 50630560 - 50630457
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | | |||||| ||| ||||||| |||||||||| ||    
T  50630560 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgc-cacctaagggtatctatgtatcatt 50630462  T
Q  101 actct 105  Q
    |||||    
T  50630461 actct 50630457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 3000421 - 3000319
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||| |||||||| ||    
T  3000421 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtttatgtatcatt 3000323  T
Q  101 actc 104  Q
    ||||    
T  3000322 actc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 48716284 - 48716382
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttactc 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| |||||| ||| |||||||||||||||||| ||||||    
T  48716284 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgc-cacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 8346386 - 8346489
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||| |||| ||||||||| ||    
T  8346386 agagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgc-cacctaaaggtgactatgtatcatt 8346484  T
Q  101 actct 105  Q
    |||||    
T  8346485 actct 8346489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 38595256 - 38595153
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||| ||||| |||||||| ||    
T  38595256 agagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaaggtgtttatgtatcatt 38595158  T
Q  101 actct 105  Q
    |||||    
T  38595157 actct 38595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 47452318 - 47452420
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||| ||| |||| | ||| |||||||||||||||||| ||    
T  47452318 agagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattac-cacctaagggtgtctatgtatcatt 47452416  T
Q  101 actc 104  Q
    ||||    
T  47452417 actc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 105
Target Start/End: Original strand, 51898683 - 51898784
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttac 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||| | |||||||||||| ||||    
T  51898683 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaagatgtctatgtatcattac 51898781  T
Q  103 tct 105  Q
    |||    
T  51898782 tct 51898784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 32813349 - 32813254
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | ||| ||| |||||| ||| ||||| ||||||||||||    
T  32813349 agagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgc-cacctaaggatgtctatgtatc 32813254  T

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Target: chr1; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 41758907 - 41758804
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||||| ||| |||||| ||  ||| |||||||||||||| ||    
T  41758907 agagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgc-catttaatggtgtctatgtatcatt 41758809  T
Q  101 actct 105  Q
    |||||    
T  41758808 actct 41758804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 43234 - 43132
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | | ||||| || | ||||  |||||||||||| ||    
T  43234 agagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattg-tctcctaagactgtctatgtatcatt 43136  T
Q  101 actc 104  Q
    ||||    
T  43135 actc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 5958998 - 5959093
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  |||| || |||||||||||||||||||| |||| |||| |||||| ||| ||||||||| ||||||||    
T  5958998 agagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgc-cacttaagggtgtttatgtatc 5959093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 13414863 - 13414791
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattg 73  Q
    ||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| ||| |||||    
T  13414863 agagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattg 13414791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 26274530 - 26274439
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||| ||||||| || |||||||||||| ||||||||||||| ||||| | ||||| | | |||||| ||||||||||||||||||||||    
T  26274530 aaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgc-cacataagggtgtctatgtatc 26274439  T

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Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 104
Target Start/End: Complemental strand, 37649297 - 37649198
Alignment:
Q  4 gaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttact 103  Q
    ||||||||||||||||||  | |||||||| ||||||||||||||||||||||| |||||  || |||||| ||| ||| | |||||||||||| |||||    
T  37649297 gaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgc-cacctaaagatgtctatgtatcattact 37649199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 44454077 - 44453986
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||| ||| ||||||| || || ||||||||||||||||||||||||| || | |||||| ||| ||| ||||||||||||||    
T  44454077 aaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgc-cacttaaaggtgtctatgtatc 44453986  T

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Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 11152378 - 11152430
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    |||||| |||||||||||||||| || ||||||||||||||||||||||||||    
T  11152378 agaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtgg 11152430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 49811525 - 49811620
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||| ||| |  || ||||||||||||||||||||||| | ||||| ||| ||||| |||| ||||| ||||||| ||||    
T  49811525 agagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattg-tcacctaaggatgtctatctatc 49811620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 50590998 - 50591093
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  50590998 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 50591093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 45044558 - 45044631
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgc 74  Q
    ||||||| |||| |||||||||||||| ||| |||| |||||||||||||| ||||| ||||| ||| ||||||    
T  45044558 agagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgc 45044631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 23597093 - 23597192
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttactc 104  Q
    |||||||| ||||||  |||| ||||| | ||||||||||||||| |||||||||||||  || |||||| ||| ||| | |||||||||||| ||||||    
T  23597093 aaagtgtgtttgtgcaaggtcaacgtggccacgtgtcagatttttatgtgggtatcaaagagtgtattgc-cacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 26440836 - 26440780
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||||||||||| |||||| |||| ||| | |||||||||||||||||||||||    
T  26440836 agagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggt 26440780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 48489400 - 48489348
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    ||||| |||||||||||||| |||||||||| || ||||||||||||||||||    
T  48489400 agaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtgg 48489348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 3302533 - 3302587
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    |||||||||||||||  ||||||||  ||| ||||||||||||||||||||||||    
T  3302533 agaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggt 3302587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 44334175 - 44334222
Alignment:
Q  8 gtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    ||||| |||||| ||||||| ||||||||||||||| |||||||||||    
T  44334175 gtgtgtttgtgctgggtccatgtgactacgtgtcaggtttttgtgtgg 44334222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 6260970 - 6260916
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||| ||||||| ||||||||||||||||| || ||| |||||||| |||||||    
T  6260970 agaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggt 6260916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 37926436 - 37926509
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgc 74  Q
    ||||||||||| ||||| |||| |||| ||| | ||||||||||||||| ||||||| | ||||| | ||||||    
T  37926436 agagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgc 37926509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 41608491 - 41608586
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| ||||| |||||||||  || | || ||||||||||||||||| || ||||  ||| |||||| ||| ||||| ||| ||||||||    
T  41608491 agagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgc-cacctaaggatgtttatgtatc 41608586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 13811754 - 13811651
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | |||||| ||| |||||||||||||||||| ||    
T  13811754 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgc-cacctaagggtgtctatgtatcttt 13811656  T
Q  101 actct 105  Q
    |||||    
T  13811655 actct 13811651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 18520882 - 18520977
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||||||||    
T  18520882 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatc 18520977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 36732940 - 36733043
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| ||||||| || |||||||||||||||||| ||    
T  36732940 agagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgct-acctaagggtgtctatgtatcatt 36733038  T
Q  101 actct 105  Q
    |||||    
T  36733039 actct 36733043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2740376 - 2740273
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||||| |||||||||||| ||    
T  2740376 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaggatgtctatgtatcatt 2740278  T
Q  101 actct 105  Q
    |||||    
T  2740277 actct 2740273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 35785301 - 35785199
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| |||||| ||| |||||||||||||||||| ||    
T  35785301 agagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacctaagggtgtctatgtatcatt 35785203  T
Q  101 actc 104  Q
    ||||    
T  35785202 actc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 40145509 - 40145407
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||| |||||| ||| |||||||||||||||||| ||    
T  40145509 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgc-cacctaagggtgtctatgtatcatt 40145411  T
Q  101 actc 104  Q
    ||||    
T  40145410 actc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 33149636 - 33149738
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||| ||| |||| | ||| |||||||||||||||||| ||    
T  33149636 agagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattac-cacctaagggtgtctatgtatcatt 33149734  T
Q  101 actc 104  Q
    ||||    
T  33149735 actc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Complemental strand, 14831914 - 14831814
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttac 102  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||| ||| |||||| ||| |||| ||||||||||||| ||||    
T  14831914 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgc-cacctaagagtgtctatgtatcattac 14831816  T
Q  103 tc 104  Q
    ||    
T  14831815 tc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 42414304 - 42414402
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgttactc 104  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||| ||| ||  |||||||||||||| ||||||    
T  42414304 aaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 28177877 - 28177782
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| |||||| ||| ||||| ||||||||||||    
T  28177877 agagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgc-cacctaaggatgtctatgtatc 28177782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 35943890 - 35943985
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||| ||||| | | |||||| ||| ||||||||||||||||||    
T  35943890 agagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgc-cacctaagggtgtctatgtatc 35943985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 6679800 - 6679705
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| |||||| ||| ||| | ||||||||||||    
T  6679800 agagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgc-cacctaaagatgtctatgtatc 6679705  T

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Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 31009088 - 31009034
Alignment:
Q  3 agaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31009088 agaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggt 31009034  T

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Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 15409608 - 15409703
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||   | ||||| |||| ||||| ||||||||||||    
T  15409608 agagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattg-tcacctaaggatgtctatgtatc 15409703  T

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Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 31132442 - 31132392
Alignment:
Q  5 aaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  31132442 aaagtatgcttgtgcggggtccacgtgactacttgtcagatttttgtgtgg 31132392  T

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Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 3921263 - 3921358
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||||||| ||||||||    
T  3921263 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaagggtgtttatgtatc 3921358  T

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Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26720618 - 26720523
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||| |||| ||| | ||||||||||||||| ||| ||| | ||| ||| |||||| ||| ||||| ||||||||||||    
T  26720618 agagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgc-cacctaaggatgtctatgtatc 26720523  T

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Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 26990367 - 26990272
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    |||||||||||||||||||||| |||| ||| | ||||||||||||||| ||| ||| | ||| ||| |||||| ||| ||||| ||||||||||||    
T  26990367 agagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgc-cacctaaggatgtctatgtatc 26990272  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 36875610 - 36875702
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| ||||||||||||         ||||||||||||| ||||| ||| |||||| ||| |||||||||||||||||| ||    
T  36875610 agagaaagtgtgcttgtgcgggatccacgtgacta---------tttttgtgtgggtgtcaaagggtgtattgc-cacctaagggtgtctatgtatcatt 36875699  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 41470425 - 41470462
Alignment:
Q  12 gcttgtgcggggtccacgtgactacgtgtcagattttt 49  Q
    ||||||||||||||||||||||||||||||||||||||    
T  41470425 gcttgtgcggggtccacgtgactacgtgtcagattttt 41470462  T

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Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 2252166 - 2252261
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| |||||||||||||||  || | || |||||||||||||||||||| ||||  ||| |||||| ||| ||||| ||| ||||||||    
T  2252166 agagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgc-cacctaaggatgtttatgtatc 2252261  T

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Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 21370106 - 21370050
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggt 57  Q
    ||||||| |||| |||||||||||||||||||| || ||||||||||||| ||||||    
T  21370106 agagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggt 21370050  T

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Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 73
Target Start/End: Complemental strand, 38296304 - 38296233
Alignment:
Q  2 gagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattg 73  Q
    |||||||||||||||||  || |||||||  ||||||||| ||||||||||||||||| || |||| |||||    
T  38296304 gagaaagtgtgcttgtgttggatccacgtagctacgtgtctgatttttgtgtgggtattaagaggtgtattg 38296233  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39557515 - 39557569
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    |||||||||||| ||||  |||||||| ||||  |||||||||||||||||||||    
T  39557515 agagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtgg 39557569  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 39688895 - 39688990
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||| ||| |||||||| ||  |||| || | |||||||||||||||||| ||||  | | |||||| ||| ||||||||| ||||||||    
T  39688895 agagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgc-cacttaagggtgtttatgtatc 39688990  T

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Target: scaffold0237 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 4131 - 4029
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| | ||||||| |||||| ||  ||| |||||||||||||| ||    
T  4131 agagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgc-catctaaaggtgtctatgtatcatt 4033  T
Q  101 actc 104  Q
    ||||    
T  4032 actc 4029  T

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Target: scaffold0321 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 10107 - 10202
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatc 97  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||| ||||| | ||||| | | |||||| ||| ||| ||||||||||||||    
T  10107 agagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgc-cacctaaaggtgtctatgtatc 10202  T

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Target: scaffold1268 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 927 - 1029
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||||||| | | ||| ||| |||||| ||| ||| | |||||||||||| ||    
T  927 agagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgc-cacctaaagatgtctatgtatcatt 1025  T
Q  101 actc 104  Q
    ||||    
T  1026 actc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 927 - 1029
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaaaggtatattgctcacataagggtgtctatgtatcgtt 100  Q
    |||||||||||||||||||||| | |||||||||||||||||| ||||||||||| | | ||| ||| |||||| ||| ||| | |||||||||||| ||    
T  927 agagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgc-cacctaaagatgtctatgtatcatt 1025  T
Q  101 actc 104  Q
    ||||    
T  1026 actc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17156 - 17102
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgg 55  Q
    ||||||| ||||||||||||||||||| ||||| || ||||||||||||||||||    
T  17156 agagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtgg 17102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8861 - 8913
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgt 53  Q
    ||||||| ||| |||||| |||||||||||||||| |||||| ||||||||||    
T  8861 agagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgt 8913  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 152600 - 152539
Alignment:
Q  1 agagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa 62  Q
    |||||||||||  ||||||||| ||||  |||| || |||||||||||||||||||| ||||    
T  152600 agagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaa 152539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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