View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4258_high_7 (Length: 253)
Name: NF4258_high_7
Description: NF4258
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4258_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 20 - 245
Target Start/End: Complemental strand, 7466962 - 7466736
Alignment:
| Q |
20 |
ctgagctcaggtgttttatctttatgaaaagcctaagcaatcttacactcacaccagttgaacagattgatttaatgctgactttatgatgcttacattg |
119 |
Q |
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| T |
7466962 |
ctgagctcacgtgtttgatctttatgaaaagcataagcaatactacactcacaccagttgaacagattgatttaatgctgactttatgatgcttacattg |
7466863 |
T |
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| Q |
120 |
gagaattttcctactgtctttt-attgtcaggtgcacgctgtgttgcaactttgttgaatgaaatgaagcgtcgtggaaaggactgtcgctttggtgtaa |
218 |
Q |
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||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
7466862 |
gagaattttcccactgtctttttattgtcaggtgcacgctgtgttgcaactttgttgaatgaaatgaagcgtcgtggaaaggactgtcggtttggtgtaa |
7466763 |
T |
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| Q |
219 |
tctcgatgtgtataggtaatttcttct |
245 |
Q |
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| T |
7466762 |
tctcgatgtgtataggtaatttcttct |
7466736 |
T |
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