View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4259_high_12 (Length: 362)
Name: NF4259_high_12
Description: NF4259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4259_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 14 - 349
Target Start/End: Original strand, 24570292 - 24570627
Alignment:
| Q |
14 |
ataaatgtttgaaaaagaataatacaatagaggggtatacatatatatgccgtgagagaatagaaacaaaatatggaaggggaagagaggctcattatgg |
113 |
Q |
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| T |
24570292 |
ataaatatttgaaaaagaataatacaatagaggggtatacatatatatgccgtgagagaatagaaacaaaatatggaaggggaagagaggctcattatgg |
24570391 |
T |
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| Q |
114 |
ccaatagcaacatgtcatagtcattaatattctcaccaaacatcaatttaaatttagaaaataactatactaacttttcatannnnnnnaagaaaattaa |
213 |
Q |
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| T |
24570392 |
ccaatagcaacatgtcatagtcattaatattctcaccaaacatcaatttaaatttagaaaataactatactaacttttcatatttttttaagaaaattaa |
24570491 |
T |
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| Q |
214 |
ctaatataggtggattgagttaagaaccagtccactaaatgctcatgagtcataattggcaccttcttccgaaaatagaaattaagttgaacagatttga |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24570492 |
ctaatataggtggattgagttaagaaccagtccactaaatgctcatgagtcataattggcaccttcttccgaaaatagaaattaagttgaacagatttga |
24570591 |
T |
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| Q |
314 |
aaacaatattattaatcatagaataatgatgtccat |
349 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
24570592 |
aaacaatattattaatcatagaataatgatgtccat |
24570627 |
T |
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