View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4259_low_23 (Length: 271)

Name: NF4259_low_23
Description: NF4259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4259_low_23
NF4259_low_23
[»] chr6 (19 HSPs)
chr6 (38-271)||(6197453-6197686)
chr6 (62-271)||(1391621-1391830)
chr6 (63-271)||(2300738-2300946)
chr6 (38-271)||(28002662-28002895)
chr6 (62-271)||(29076595-29076805)
chr6 (62-271)||(29111568-29111779)
chr6 (69-192)||(31895772-31895895)
chr6 (62-266)||(7051847-7052051)
chr6 (69-192)||(34759056-34759179)
chr6 (69-192)||(34773485-34773608)
chr6 (69-192)||(14262439-14262562)
chr6 (69-192)||(7497152-7497274)
chr6 (69-192)||(31067569-31067682)
chr6 (69-192)||(30385075-30385186)
chr6 (69-177)||(4200443-4200541)
chr6 (97-271)||(656963-657122)
chr6 (62-111)||(2238668-2238717)
chr6 (63-103)||(11113733-11113773)
chr6 (148-192)||(3848286-3848330)
[»] chr4 (65 HSPs)
chr4 (38-271)||(25331128-25331361)
chr4 (62-271)||(41881082-41881292)
chr4 (62-271)||(1112890-1113099)
chr4 (62-270)||(55302841-55303049)
chr4 (62-271)||(12112942-12113151)
chr4 (62-271)||(22202012-22202221)
chr4 (63-271)||(32950837-32951045)
chr4 (40-271)||(1044806-1045035)
chr4 (38-271)||(34228559-34228792)
chr4 (62-271)||(7007371-7007580)
chr4 (38-235)||(30009653-30009850)
chr4 (39-271)||(39479332-39479566)
chr4 (62-271)||(37046450-37046661)
chr4 (40-193)||(41320885-41321038)
chr4 (62-239)||(42786713-42786890)
chr4 (62-271)||(46635648-46635851)
chr4 (92-271)||(28541695-28541874)
chr4 (38-191)||(3436670-3436823)
chr4 (39-267)||(31314719-31314933)
chr4 (83-271)||(19740929-19741117)
chr4 (91-238)||(25446080-25446227)
chr4 (92-193)||(7249795-7249896)
chr4 (38-271)||(24130957-24131181)
chr4 (69-192)||(5441480-5441603)
chr4 (69-192)||(27768132-27768255)
chr4 (69-192)||(54341220-54341343)
chr4 (62-193)||(27454078-27454209)
chr4 (69-192)||(37828409-37828532)
chr4 (69-192)||(54853475-54853598)
chr4 (69-192)||(48261203-48261326)
chr4 (71-191)||(44770862-44770982)
chr4 (69-271)||(51320918-51321120)
chr4 (62-193)||(53275914-53276046)
chr4 (63-271)||(40537161-40537354)
chr4 (62-188)||(9163156-9163274)
chr4 (72-192)||(37915903-37916023)
chr4 (106-271)||(23464952-23465117)
chr4 (69-192)||(32322167-32322290)
chr4 (119-238)||(25504696-25504815)
chr4 (69-156)||(8711978-8712065)
chr4 (62-192)||(39307253-39307383)
chr4 (69-192)||(23987290-23987403)
chr4 (69-191)||(12913301-12913413)
chr4 (69-156)||(24736447-24736534)
chr4 (69-191)||(56445362-56445474)
chr4 (106-191)||(28371001-28371086)
chr4 (69-188)||(41725205-41725321)
chr4 (69-192)||(30967316-30967429)
chr4 (62-137)||(11090435-11090510)
chr4 (69-192)||(36479249-36479361)
chr4 (71-177)||(20021424-20021531)
chr4 (126-192)||(29649731-29649797)
chr4 (72-192)||(5800054-5800164)
chr4 (63-192)||(28483975-28484093)
chr4 (68-192)||(41581795-41581918)
chr4 (139-192)||(32684065-32684118)
chr4 (139-192)||(49834890-49834943)
chr4 (69-192)||(49501526-49501641)
chr4 (69-192)||(49507591-49507706)
chr4 (72-192)||(50018327-50018437)
chr4 (72-126)||(32684018-32684072)
chr4 (72-136)||(36727960-36728023)
chr4 (69-126)||(49834840-49834897)
chr4 (70-103)||(55047641-55047674)
chr4 (70-162)||(12193135-12193227)
[»] chr3 (62 HSPs)
chr3 (38-271)||(20498206-20498439)
chr3 (62-271)||(19253824-19254033)
chr3 (38-271)||(996062-996295)
chr3 (38-271)||(10139122-10139355)
chr3 (62-271)||(33807798-33808008)
chr3 (62-271)||(3999645-3999854)
chr3 (38-239)||(3206181-3206382)
chr3 (38-271)||(37820453-37820686)
chr3 (68-271)||(33996547-33996750)
chr3 (62-271)||(6589561-6589770)
chr3 (62-271)||(29448858-29449067)
chr3 (62-271)||(25418363-25418572)
chr3 (38-271)||(35337732-35337963)
chr3 (62-271)||(40246841-40247050)
chr3 (62-238)||(54625622-54625798)
chr3 (62-271)||(44762037-44762246)
chr3 (62-270)||(53929128-53929336)
chr3 (77-271)||(51699495-51699688)
chr3 (63-271)||(52114525-52114734)
chr3 (62-188)||(6035053-6035179)
chr3 (69-271)||(17946285-17946487)
chr3 (62-191)||(5825139-5825268)
chr3 (69-192)||(18749688-18749811)
chr3 (69-192)||(54628920-54629043)
chr3 (69-191)||(40897221-40897343)
chr3 (62-150)||(6131233-6131321)
chr3 (69-271)||(34484037-34484239)
chr3 (69-192)||(32580252-32580375)
chr3 (69-192)||(36674137-36674260)
chr3 (69-271)||(44906520-44906722)
chr3 (69-192)||(11431602-11431725)
chr3 (70-271)||(29030003-29030203)
chr3 (97-193)||(22057837-22057933)
chr3 (69-192)||(26107337-26107460)
chr3 (62-192)||(27899420-27899540)
chr3 (116-271)||(1440006-1440162)
chr3 (69-192)||(31646293-31646414)
chr3 (62-165)||(1439894-1439997)
chr3 (69-192)||(48379233-48379356)
chr3 (69-192)||(50903247-50903370)
chr3 (82-192)||(51737746-51737856)
chr3 (69-192)||(52810454-52810577)
chr3 (69-271)||(52617978-52618174)
chr3 (73-192)||(20833068-20833187)
chr3 (62-193)||(52080002-52080117)
chr3 (94-188)||(55235264-55235359)
chr3 (69-271)||(10728658-10728850)
chr3 (62-115)||(33807680-33807733)
chr3 (128-192)||(10660611-10660675)
chr3 (69-192)||(37454937-37455050)
chr3 (63-191)||(44276466-44276580)
chr3 (62-188)||(39842494-39842610)
chr3 (69-271)||(39038037-39038229)
chr3 (69-192)||(50762067-50762180)
chr3 (80-192)||(6975822-6975924)
chr3 (134-192)||(539476-539534)
chr3 (139-271)||(23753463-23753595)
chr3 (69-126)||(45862983-45863040)
chr3 (69-137)||(15492874-15492942)
chr3 (70-125)||(12103733-12103789)
chr3 (141-192)||(23535890-23535941)
chr3 (69-126)||(23753414-23753470)
[»] chr2 (36 HSPs)
chr2 (38-271)||(31170602-31170835)
chr2 (62-271)||(24776354-24776563)
chr2 (38-271)||(14198555-14198788)
chr2 (38-271)||(16269690-16269923)
chr2 (38-271)||(20605235-20605468)
chr2 (38-271)||(12407379-12407612)
chr2 (38-271)||(43847645-43847878)
chr2 (62-271)||(5093049-5093258)
chr2 (38-271)||(305443-305676)
chr2 (38-271)||(35317061-35317294)
chr2 (38-271)||(22551741-22551974)
chr2 (68-193)||(32125330-32125455)
chr2 (82-271)||(1789441-1789630)
chr2 (38-193)||(9120203-9120358)
chr2 (62-271)||(44765774-44765974)
chr2 (69-271)||(28844554-28844756)
chr2 (69-271)||(33135622-33135823)
chr2 (69-271)||(18177266-18177468)
chr2 (69-192)||(10657484-10657607)
chr2 (69-192)||(25288237-25288360)
chr2 (87-192)||(26788864-26788969)
chr2 (69-180)||(43078653-43078764)
chr2 (62-188)||(10125302-10125418)
chr2 (69-271)||(28740302-28740494)
chr2 (69-192)||(3463750-3463863)
chr2 (69-191)||(13833441-13833553)
chr2 (128-192)||(7026682-7026746)
chr2 (62-239)||(26601214-26601379)
chr2 (128-191)||(379016-379079)
chr2 (139-188)||(3574929-3574978)
chr2 (69-126)||(6224576-6224633)
chr2 (155-192)||(215320-215357)
chr2 (139-192)||(6224626-6224679)
chr2 (71-126)||(215249-215303)
chr2 (213-271)||(20605151-20605209)
chr2 (148-192)||(21370638-21370682)
[»] chr1 (48 HSPs)
chr1 (38-271)||(49198245-49198477)
chr1 (38-271)||(19451784-19452017)
chr1 (38-271)||(21222138-21222371)
chr1 (38-271)||(50192526-50192760)
chr1 (62-271)||(6304252-6304462)
chr1 (62-271)||(35279663-35279872)
chr1 (38-271)||(45759985-45760219)
chr1 (38-271)||(47654327-47654561)
chr1 (62-271)||(35679128-35679337)
chr1 (67-235)||(49418111-49418279)
chr1 (38-271)||(28824349-28824581)
chr1 (38-271)||(47780702-47780935)
chr1 (62-271)||(45535935-45536150)
chr1 (39-192)||(31572174-31572327)
chr1 (72-192)||(32588963-32589083)
chr1 (62-188)||(9577432-9577558)
chr1 (97-271)||(730139-730314)
chr1 (62-239)||(29556127-29556305)
chr1 (69-192)||(6312644-6312767)
chr1 (69-192)||(25612227-25612350)
chr1 (69-192)||(29396395-29396518)
chr1 (72-192)||(51701650-51701770)
chr1 (69-192)||(15835060-15835183)
chr1 (69-192)||(48177469-48177592)
chr1 (62-188)||(37014640-37014766)
chr1 (69-192)||(9322507-9322630)
chr1 (70-271)||(46328033-46328234)
chr1 (91-188)||(48524393-48524490)
chr1 (69-192)||(28387400-28387523)
chr1 (62-271)||(33025503-33025703)
chr1 (69-192)||(38536106-38536219)
chr1 (69-192)||(38558324-38558437)
chr1 (130-189)||(955823-955882)
chr1 (62-192)||(48668785-48668905)
chr1 (73-192)||(5495117-5495226)
chr1 (69-192)||(29219356-29219469)
chr1 (106-192)||(51085865-51085951)
chr1 (139-189)||(31622536-31622586)
chr1 (139-192)||(18798561-18798614)
chr1 (70-162)||(38320006-38320098)
chr1 (96-192)||(47784456-47784542)
chr1 (148-271)||(49230877-49231000)
chr1 (70-126)||(18798607-18798663)
chr1 (39-99)||(48524805-48524865)
chr1 (175-271)||(22183361-22183457)
chr1 (205-271)||(953810-953876)
chr1 (72-137)||(45272700-45272765)
chr1 (98-126)||(955876-955904)
[»] chr5 (26 HSPs)
chr5 (62-271)||(21147065-21147274)
chr5 (38-239)||(7016714-7016915)
chr5 (62-271)||(33656040-33656251)
chr5 (68-271)||(5272924-5273127)
chr5 (38-271)||(27458925-27459157)
chr5 (68-271)||(139271-139474)
chr5 (82-239)||(849177-849334)
chr5 (38-271)||(32157869-32158106)
chr5 (62-271)||(1152102-1152311)
chr5 (69-192)||(14000111-14000234)
chr5 (96-271)||(6460790-6460965)
chr5 (69-192)||(13926008-13926131)
chr5 (69-192)||(39852422-39852545)
chr5 (72-192)||(4550266-4550386)
chr5 (69-188)||(7947579-7947698)
chr5 (62-192)||(9689735-9689864)
chr5 (102-192)||(14465266-14465356)
chr5 (69-192)||(5949185-5949298)
chr5 (69-271)||(4240468-4240660)
chr5 (62-188)||(22746378-22746496)
chr5 (128-188)||(1461203-1461263)
chr5 (69-188)||(40013718-40013827)
chr5 (62-188)||(9220716-9220832)
chr5 (139-190)||(37013993-37014044)
chr5 (62-137)||(1511349-1511426)
chr5 (69-126)||(37014037-37014094)
[»] chr8 (39 HSPs)
chr8 (38-271)||(24501788-24502021)
chr8 (62-271)||(26374429-26374638)
chr8 (62-271)||(42938116-42938325)
chr8 (38-271)||(2704794-2705027)
chr8 (38-271)||(5576595-5576829)
chr8 (38-271)||(42937351-42937582)
chr8 (38-271)||(7506874-7507107)
chr8 (38-271)||(42735252-42735485)
chr8 (62-271)||(23115168-23115376)
chr8 (63-271)||(10392237-10392445)
chr8 (38-271)||(41479095-41479318)
chr8 (62-192)||(4403184-4403314)
chr8 (69-192)||(9288463-9288586)
chr8 (69-192)||(14782141-14782264)
chr8 (69-192)||(44725816-44725939)
chr8 (69-192)||(10295386-10295510)
chr8 (69-192)||(43166696-43166819)
chr8 (38-271)||(43959656-43959878)
chr8 (68-190)||(4950021-4950143)
chr8 (72-192)||(18958736-18958856)
chr8 (69-192)||(19717887-19718010)
chr8 (72-192)||(39467477-39467597)
chr8 (69-192)||(26856144-26856267)
chr8 (74-271)||(32711305-32711490)
chr8 (62-189)||(39189815-39189940)
chr8 (69-192)||(18305977-18306090)
chr8 (82-189)||(13478269-13478376)
chr8 (69-192)||(7466412-7466525)
chr8 (69-192)||(32497602-32497715)
chr8 (83-191)||(8410416-8410526)
chr8 (128-192)||(16362273-16362337)
chr8 (69-192)||(37857196-37857309)
chr8 (69-192)||(42305801-42305914)
chr8 (139-271)||(31623693-31623825)
chr8 (139-192)||(4031334-4031387)
chr8 (62-126)||(9770439-9770503)
chr8 (69-126)||(31623818-31623875)
chr8 (82-126)||(4031297-4031341)
chr8 (148-188)||(9770505-9770545)
[»] chr7 (61 HSPs)
chr7 (38-271)||(973183-973416)
chr7 (38-271)||(18914710-18914943)
chr7 (38-271)||(34695272-34695505)
chr7 (38-271)||(40996624-40996857)
chr7 (63-271)||(43581090-43581298)
chr7 (62-271)||(44343395-44343604)
chr7 (38-271)||(30440795-30441028)
chr7 (38-271)||(47879167-47879400)
chr7 (38-271)||(47914265-47914498)
chr7 (62-239)||(7718361-7718538)
chr7 (62-271)||(7719259-7719468)
chr7 (62-271)||(12893407-12893616)
chr7 (38-271)||(34009011-34009245)
chr7 (38-271)||(20275238-20275471)
chr7 (38-239)||(39219352-39219552)
chr7 (62-192)||(32142916-32143046)
chr7 (62-194)||(7113528-7113660)
chr7 (62-192)||(10068538-10068668)
chr7 (92-194)||(43679490-43679592)
chr7 (69-192)||(23101369-23101492)
chr7 (69-192)||(28342418-28342541)
chr7 (69-192)||(3022997-3023120)
chr7 (69-192)||(28034811-28034934)
chr7 (69-188)||(29614770-29614889)
chr7 (69-192)||(39784170-39784293)
chr7 (69-192)||(18838460-18838583)
chr7 (62-192)||(12740444-12740573)
chr7 (90-192)||(12963772-12963874)
chr7 (62-191)||(43187356-43187485)
chr7 (72-191)||(33382709-33382828)
chr7 (69-191)||(7993214-7993336)
chr7 (69-271)||(9882243-9882444)
chr7 (69-192)||(8675404-8675527)
chr7 (81-189)||(727594-727692)
chr7 (62-271)||(9179872-9180071)
chr7 (69-188)||(19810874-19810983)
chr7 (93-192)||(25805763-25805862)
chr7 (69-177)||(37972873-37972981)
chr7 (62-271)||(3797066-3797265)
chr7 (130-235)||(31638910-31639015)
chr7 (69-165)||(41827402-41827498)
chr7 (72-192)||(44256775-44256895)
chr7 (63-192)||(19251610-19251729)
chr7 (40-192)||(1470213-1470362)
chr7 (106-189)||(10676463-10676546)
chr7 (97-192)||(32883853-32883948)
chr7 (126-192)||(46405494-46405560)
chr7 (72-192)||(44121919-44122029)
chr7 (69-192)||(509727-509840)
chr7 (128-192)||(37327998-37328062)
chr7 (69-192)||(40460723-40460836)
chr7 (79-157)||(10617024-10617102)
chr7 (69-191)||(29585586-29585698)
chr7 (139-271)||(17001099-17001231)
chr7 (72-271)||(44623295-44623484)
chr7 (139-192)||(47066775-47066828)
chr7 (72-192)||(33892269-33892379)
chr7 (128-188)||(39028172-39028232)
chr7 (133-192)||(447854-447913)
chr7 (69-126)||(17001049-17001106)
chr7 (69-126)||(47066821-47066878)
[»] scaffold0400 (1 HSPs)
scaffold0400 (38-271)||(15009-15242)
[»] scaffold0365 (1 HSPs)
scaffold0365 (38-271)||(15652-15885)
[»] scaffold0151 (1 HSPs)
scaffold0151 (38-239)||(38581-38781)
[»] scaffold0113 (1 HSPs)
scaffold0113 (62-271)||(38895-39104)
[»] scaffold0037 (1 HSPs)
scaffold0037 (65-271)||(100209-100415)
[»] scaffold0004 (1 HSPs)
scaffold0004 (62-271)||(102091-102302)
[»] scaffold0276 (1 HSPs)
scaffold0276 (63-271)||(540-748)
[»] scaffold0543 (1 HSPs)
scaffold0543 (69-192)||(10637-10760)
[»] scaffold0110 (1 HSPs)
scaffold0110 (69-192)||(39624-39747)
[»] scaffold0054 (1 HSPs)
scaffold0054 (69-190)||(36914-37035)
[»] scaffold0042 (1 HSPs)
scaffold0042 (69-197)||(58083-58211)
[»] scaffold1504 (1 HSPs)
scaffold1504 (69-192)||(941-1063)
[»] scaffold0306 (1 HSPs)
scaffold0306 (69-192)||(13959-14072)
[»] scaffold0152 (3 HSPs)
scaffold0152 (128-192)||(21304-21368)
scaffold0152 (69-101)||(21255-21287)
scaffold0152 (69-101)||(28510-28542)
[»] scaffold0347 (1 HSPs)
scaffold0347 (62-137)||(14892-14967)
[»] scaffold0839 (1 HSPs)
scaffold0839 (82-162)||(3712-3792)
[»] scaffold0922 (1 HSPs)
scaffold0922 (132-192)||(4277-4337)
[»] scaffold0007 (1 HSPs)
scaffold0007 (96-189)||(199905-199998)


Alignment Details
Target: chr6 (Bit Score: 151; Significance: 6e-80; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 6197453 - 6197686
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197453 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 6197552  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  6197553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 6197652  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  6197653 actttttttaaatgacaaagaatcttgattgaat 6197686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 1391830 - 1391621
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1391830 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1391731  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||||  ||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       ||||||||| |||||    
T  1391730 ccttccaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttatttaaatgacaatgaatc 1391631  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  1391630 ttgattgaat 1391621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 63 - 271
Target Start/End: Original strand, 2300738 - 2300946
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2300738 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 2300837  T
Q  163 ctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatct 262  Q
    ||| ||||||||||||||||| ||||||| |  ||       ||||||| ||||||| | |||||||||||||||||       ||||||||||||||||    
T  2300838 cttcgaaatttgaatgattttcaataccagtagactttttttaagtgatcaagagtcttgattgaataccacaagactttttttaaatgacaaagaatct 2300937  T
Q  263 tgattgaat 271  Q
    |||||||||    
T  2300938 tgattgaat 2300946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 28002895 - 28002662
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  28002895 tagtaaaatcttaaaagaaaaaaacaatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatcca 28002796  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||  ||       ||||||||||||||| | ||||||||||| |||    
T  28002795 tcaaaatctgatttattaaacaatccttccaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccagaag 28002696  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||| ||||||||||||||    
T  28002695 actttttttaaatgacaaaaaatcttgattgaat 28002662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 29076805 - 29076595
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29076805 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29076706  T
Q  162 cctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaat 260  Q
    |||| ||||||||||||||||||||||| ||| ||         |||||||||||| ||   |||||||||||||||||       ||||||||||||||    
T  29076705 ccttcgaaatttgaatgattttgaatactactagacttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaat 29076606  T
Q  261 cttgattgaat 271  Q
    |||||||||||    
T  29076605 cttgattgaat 29076595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 29111779 - 29111568
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29111779 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29111680  T
Q  162 cctttgaaatttgaatgattttgaataccactgaac--nnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaa 259  Q
    |||| ||||||||||||||||||||||| |||  ||         |||||||||||| ||   |||||||||||||||||       |||||||||||||    
T  29111679 ccttcgaaatttgaatgattttgaatactactagactttttttttaagtgattaagaatctagattgaataccacaagactttttttaaatgacaaagaa 29111580  T
Q  260 tcttgattgaat 271  Q
    ||||||||||||    
T  29111579 tcttgattgaat 29111568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 31895895 - 31895772
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  31895895 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 31895796  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  31895795 aatttgaatgattttgaataccac 31895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 266
Target Start/End: Complemental strand, 7052051 - 7051847
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||| ||||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  7052051 caattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaat 7051952  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||| |||   ||       ||||||| ||||||| | |||| ||||||||||||       |||||||||||||||    
T  7051951 ccttcgaaatttgaatgattttgaatatcacacgactttttttaagtgatgaagagtcttgattgtataccacaagactttttttaaatgacaaagaatc 7051852  T
Q  262 ttgat 266  Q
    |||||    
T  7051851 ttgat 7051847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 34759056 - 34759179
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  34759056 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttgga 34759155  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  34759156 aatttgaatgattttgaataccac 34759179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 34773608 - 34773485
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||  ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  34773508 aatttgaatgattttgaataccac 34773485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 14262439 - 14262562
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||| ||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  14262439 aagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 14262538  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||| ||||||||||||||||||    
T  14262539 aatttaaatgattttgaataccac 14262562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 7497274 - 7497152
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||| ||||||||||||||||||  |||||||||||| ||||| ||    
T  7497274 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttattaaacactccttcga 7497176  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  7497175 aatttgaatgattttgaataccac 7497152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 31067682 - 31067569
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||||| ||    
T  31067682 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 31067593  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  31067592 aatttgaatgattttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 30385075 - 30385186
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||||||| |  || ||||||| ||||| ||||||||||||||||||          |||||||||||||||||| ||    
T  30385075 aagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 30385162  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  30385163 aatttgaatgattttgaataccac 30385186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 4200443 - 4200541
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||          ||||||||||||||||||  |||||||||||||||||| ||    
T  4200443 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacact----------acaaaatccatcaaaatccaatttattaaacaatccttcga 4200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 657122 - 656963
Alignment:
Q  97 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaa 196  Q
    |||||||| |||||||||||||   ||||||||||||||||||| |||| ||||||||||           ||||||||||||||| ||||||||||  |    
T  657122 ttttcatgataaaatttcacta---aatcccacaaaatccatcagaatcagatttattaa-----------aaatttgaatgatttagaataccactaga 657037  T
Q  197 cnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |       ||||||||||||||| | |||||||||||||||||       ||||| |||||||||||||||||||    
T  657036 ctttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatg-caaagaatcttgattgaat 656963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 62 - 111
Target Start/End: Complemental strand, 2238717 - 2238668
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaat 111  Q
    ||||| ||||||||||||||||||||||||||| |||||||| |||||||    
T  2238717 caatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 103
Target Start/End: Original strand, 11113733 - 11113773
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcat 103  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttcat 11113773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 3848330 - 3848286
Alignment:
Q  148 atttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||| ||  |||||| ||||||||||||||||||    
T  3848330 atttattaaacaatcattcaaaatttaaatgattttgaataccac 3848286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 6e-80; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 25331361 - 25331128
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25331361 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 25331262  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||       ||||||||||||||| | |||||||||||||||    
T  25331261 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacaag 25331162  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  25331161 actttttttaaatgacaaagaatcttgattgaat 25331128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 41881082 - 41881292
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881082 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 41881181  T
Q  162 cctttgaaatttgaatgattttgaataccactgaac-nnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaat 260  Q
    |||| ||||||||||||||||||||||||||| |||        ||||||||||||||| | |||||||||||||||||       ||||||||||||||    
T  41881182 ccttcgaaatttgaatgattttgaataccactaaacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 41881281  T
Q  261 cttgattgaat 271  Q
    |||||||||||    
T  41881282 cttgattgaat 41881292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 1113099 - 1112890
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1113099 caatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaat 1113000  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    | ||||||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  1112999 catttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 1112900  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  1112899 ttgattgaat 1112890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 62 - 270
Target Start/End: Complemental strand, 55303049 - 55302841
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55303049 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaat 55302950  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||||||| |||       |||||||||||||||    
T  55302949 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgacttttttaaaatgacaaagaatc 55302850  T
Q  262 ttgattgaa 270  Q
    |||||||||    
T  55302849 ttgattgaa 55302841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 12113151 - 12112942
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12113151 caatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaat 12113052  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| ||||||||||||||||||||||||| |  ||       ||||||||||||||  | |||||||||||||||||       |||||||||||||||    
T  12113051 ccttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagaatc 12112952  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  12112951 ttgattgaat 12112942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 22202221 - 22202012
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22202221 caatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaat 22202122  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    | |||||||||| |||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  22202121 cttttgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 22202022  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  22202021 ttgattgaat 22202012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 63 - 271
Target Start/End: Original strand, 32950837 - 32951045
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32950837 aatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatc 32950936  T
Q  163 ctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatct 262  Q
    ||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||||||| |||       |||||||||| |||||    
T  32950937 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacaaataatct 32951036  T
Q  263 tgattgaat 271  Q
    |||||||||    
T  32951037 tgattgaat 32951045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 40 - 271
Target Start/End: Complemental strand, 1045035 - 1044806
Alignment:
Q  40 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 139  Q
    |||||||||||||||       |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1045035 gtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 1044936  T
Q  140 aaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagac 239  Q
    |||||||||||||||||||||||||| |||| ||||||| ||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||    
T  1044935 aaaatctgatttattaaacaatccttcgaaagttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 1044836  T
Q  240 nnnnnnnaaatgacaaagaatcttgattgaat 271  Q
           ||||||||| |||||||||||||||    
T  1044835 --tttttaaatgacaaggaatcttgattgaat 1044806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 34228559 - 34228792
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  34228559 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 34228658  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||  ||       |||||||||||| |  | ||||||||||||| |    
T  34228659 tcaaaatctgatttattaaacaatcattcgaaatttcaatgattttgaataccactagactttttttaagtgattaagaattttgattgaataccacatg 34228758  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  34228759 actttttttaaatgacaaagaatcttgattgaat 34228792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 7007580 - 7007371
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7007580 caatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaat 7007481  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||||||| |||       |||||||| ||||||    
T  7007480 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatgactttttttaaatgacagagaatc 7007381  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  7007380 ttgattgaat 7007371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 38 - 235
Target Start/End: Original strand, 30009653 - 30009850
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30009653 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatcca 30009752  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccaca 235  Q
    ||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||    
T  30009753 tcaaaatctgatttattaaacaatcatttaaaatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccaca 30009850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 39 - 271
Target Start/End: Original strand, 39479332 - 39479566
Alignment:
Q  39 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 138  Q
    ||||||||||||||||       |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  39479332 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccat 39479431  T
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnn--aagtgattaagagtccttattgaataccacaa 236  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    |         ||||||||||||||| | ||||||||||||||    
T  39479432 caaaatctgatttattaaacaattcttcgaaatttgaatgattttgaataccacaagtctttttttttaagtgattaagagtcttgattgaataccacaa 39479531  T
Q  237 gacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||       ||||||||| |||||||||||||||    
T  39479532 gactttttttaaatgacaaggaatcttgattgaat 39479566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 37046450 - 37046661
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaattt-cactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 160  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  37046450 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaa 37046549  T
Q  161 tcctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaa 259  Q
    ||||| ||||||||||||||||| |||| |||| ||         ||||||||||||||| | |||||||||||||| ||       |||||||||||||    
T  37046550 tccttcgaaatttgaatgattttaaatatcactagacttttttttaagtgattaagagtcttgattgaataccacaaaactttttttaaatgacaaagaa 37046649  T
Q  260 tcttgattgaat 271  Q
    ||||||||||||    
T  37046650 tcttgattgaat 37046661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 40 - 193
Target Start/End: Complemental strand, 41321038 - 41320885
Alignment:
Q  40 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 139  Q
    |||||||||||||||       ||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||    
T  41321038 gtaaaatcttaaaagaaaaaatcaatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatc 41320939  T
Q  140 aaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact 193  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  41320938 aaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccact 41320885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 62 - 239
Target Start/End: Complemental strand, 42786890 - 42786713
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  42786890 caatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaat 42786791  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagac 239  Q
    |||| |||||||||||||||||||||||||||  ||       || |||||||||||| | |||||||||||||||||    
T  42786790 ccttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagac 42786713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 46635648 - 46635851
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||      ||||| ||||||||||||||    
T  46635648 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc------aatcttatttattaaacaat 46635741  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| ||||||||||||||||||||||| ||| |||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  46635742 ccttcgaaatttgaatgattttgaatactactaaactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 46635841  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  46635842 ttgattgaat 46635851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 92 - 271
Target Start/End: Complemental strand, 28541874 - 28541695
Alignment:
Q  92 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacca 191  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  192 ctgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||  ||       ||||||||||||||| | |||||||||||| ||||       |||||||||||||||||||||||||    
T  28541774 ctagactttttttaagtgattaagagtcttgattgaataccacgagactttttttaaatgacaaagaatcttgattgaat 28541695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 191
Target Start/End: Complemental strand, 3436823 - 3436670
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||| ||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||| ||    
T  3436823 tagtaaaatcttaaaagaaaaaaacaattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattca 3436724  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3436723 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 3436670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 39 - 267
Target Start/End: Original strand, 31314719 - 31314933
Alignment:
Q  39 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 138  Q
    ||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              
T  31314719 agtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccca---------- 31314808  T
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaaga 238  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       |||||||||||||||    |||||||||||||||    
T  31314809 caaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc----ttgaataccacaaga 31314904  T
Q  239 cnnnnnnnaaatgacaaagaatcttgatt 267  Q
    |       |||||||||||||||||||||    
T  31314905 ctttttttaaatgacaaagaatcttgatt 31314933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 83 - 271
Target Start/End: Original strand, 19740929 - 19741117
Alignment:
Q  83 tttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattt 182  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19740929 tttcatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattt 19741028  T
Q  183 tgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    | ||||||||   ||       |||||||||| |||| | | ||||||||||| |||       |||||||||||||||||||||||||    
T  19741029 ttaataccacaagactttttttaagtgattaaaagtcttgactgaataccacatgactttttataaatgacaaagaatcttgattgaat 19741117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 91 - 238
Target Start/End: Complemental strand, 25446227 - 25446080
Alignment:
Q  91 aagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacc 190  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  191 actgaacnnnnnnnaagtgattaagagtccttattgaataccacaaga 238  Q
    |||  ||       ||||||||||||||| | ||||||||||||||||    
T  25446127 actagactttttttaagtgattaagagtcttgattgaataccacaaga 25446080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 7249795 - 7249896
Alignment:
Q  92 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  192 ct 193  Q
    ||    
T  7249895 ct 7249896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 24130957 - 24131181
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcactagaaaatcccacaaaatcc 136  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||    
T  24130957 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatcc 24131056  T
Q  137 atcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaa 236  Q
    |||||||||||||||||||||||||| || ||||          |||||||||||||  ||       ||||||||||||||| | ||||||||||||||    
T  24131057 atcaaaatctgatttattaaacaatcattcgaaa----------tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaa 24131146  T
Q  237 gacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||       |||||||||||||||||||||||||    
T  24131147 gactttttttaaatgacaaagaatcttgattgaat 24131181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 5441603 - 5441480
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  5441603 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 5441504  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  5441503 aatttgaatgattttgaataccac 5441480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 27768255 - 27768132
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  27768255 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 27768156  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  27768155 aatttgaatgattttgaataccac 27768132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 54341343 - 54341220
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  54341343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 54341244  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  54341243 aatttgaatgattttgaataccac 54341220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 27454078 - 27454209
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||| |||| | ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||    
T  27454078 caatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaaataat 27454177  T
Q  162 cctttgaaatttgaatgattttgaataccact 193  Q
    | ||  ||||||||||||||||||||||||||    
T  27454178 ctttcaaaatttgaatgattttgaataccact 27454209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 37828409 - 37828532
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| |  ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  37828409 aagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 37828508  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  37828509 aatttgaatgattttgaataccac 37828532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 54853475 - 54853598
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54853475 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54853574  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||| ||||||||||||||    
T  54853575 aatttgaataattttgaataccac 54853598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 48261326 - 48261203
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |    
T  48261326 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 48261227  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  48261226 aatttgaatgattttgaataccac 48261203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 71 - 191
Target Start/End: Original strand, 44770862 - 44770982
Alignment:
Q  71 gaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaa 170  Q
    ||||||||||||  ||||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||  |||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaa 44770961  T
Q  171 tttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||    
T  44770962 tttgaatgattttgaatacca 44770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 271
Target Start/End: Complemental strand, 51321120 - 51320918
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| |||||  |||||||||||||||||||  |||||||||||||||||| ||    
T  51321120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaaacaatccttcga 51321021  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  51321020 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 51320921  T
Q  269 aat 271  Q
    |||    
T  51320920 aat 51320918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 53276046 - 53275914
Alignment:
Q  62 caatcctaagaaatctcatgttttca-tgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 160  Q
    ||||||||| |||||| | ||||| | |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||    
T  53276046 caatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaa 53275947  T
Q  161 tcctttgaaatttgaatgattttgaataccact 193  Q
    ||||| ||||||||||||||||| |||| ||||    
T  53275946 tccttcgaaatttgaatgattttaaatatcact 53275914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 271
Target Start/End: Original strand, 40537161 - 40537354
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||| ||||||||||||||||    
T  40537161 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca----------ccacaaaatccatcaaaatcagatttattaaacaatc 40537250  T
Q  163 ctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatct 262  Q
     || ||||||| ||||||||||||||||     ||       ||||||||||||||  | |||||||||||||||||       |||||||||||| |||    
T  40537251 attcgaaatttaaatgattttgaatacc-----acattttttaagtgattaagagttttgattgaataccacaagactttttttaaatgacaaagagtct 40537345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 9163274 - 9163156
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  9163274 caatcataagaaatctcatgttttcatga--------ttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatttaatttattaaacaat 9163183  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
    |||| ||||||||||||||||||||||    
T  9163182 ccttcgaaatttgaatgattttgaata 9163156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 37916023 - 37915903
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    |||||| || |||||||||| ||||||||| || ||||| | ||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  37916023 aaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 37915924  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  37915923 ttgaatgattttgaataccac 37915903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 23465117 - 23464952
Alignment:
Q  106 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnna 205  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||  ||       |    
T  23465117 taaaatttaactagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccactagacttatttta 23465018  T
Q  206 agtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||||||||||||| | ||||||||  |||| ||       ||||||||| |||||||||||||||    
T  23465017 agtgattaagagtcttgattgaatattacaaaactttttttaaatgacaaggaatcttgattgaat 23464952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 32322290 - 32322167
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||| ||||| |  ||||||| ||||| |||||||||||||||||||||||||   |||||||||||||||||| ||    
T  32322290 aagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 32322191  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  32322190 aatttgaatgattttgaataccac 32322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 119 - 238
Target Start/End: Original strand, 25504696 - 25504815
Alignment:
Q  119 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||       ||||||||||||||    
T  25504696 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactggactttttttaagtgattaagagt 25504795  T
Q  219 ccttattgaataccacaaga 238  Q
    | | |||||||| |||||||    
T  25504796 cttgattgaatatcacaaga 25504815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 8712065 - 8711978
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 156  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  8712065 aagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatccatcaaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 39307253 - 39307383
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||| ||||||||||||||||||| || | | ||||||||||| ||||||||||||||||||||||||||||| ||||||||    ||| |||||| |||    
T  39307253 caattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaaactcaattcattaaataat 39307352  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    | || ||||||||||||||| ||||||||||    
T  39307353 ctttagaaatttgaatgattatgaataccac 39307383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 23987403 - 23987290
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||| |||||||||||||||||| ||    
T  23987403 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatctaatttattaaacaatccttcga 23987314  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  23987313 aatttgaatgattttgaataccac 23987290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 12913413 - 12913301
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||||| ||||||||| |||||||| || ||||||||||||||||||||||||||||||||          ||||||||||||||||||  |    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatccttcaa 12913324  T
Q  169 aatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||    
T  12913323 aatttgaatgattttgaatacca 12913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 156
Target Start/End: Complemental strand, 24736534 - 24736447
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 156  Q
    ||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 56445362 - 56445474
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||||| || ||||||||||||||| ||||||| |||||||||||||||||||||||||||          ||||||||||||||| || ||    
T  56445362 aagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca----------atttattaaacaatcattcga 56445451  T
Q  169 aatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||    
T  56445452 aatttgaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 106 - 191
Target Start/End: Complemental strand, 28371086 - 28371001
Alignment:
Q  106 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacca 191  Q
    ||||||||||||||||||||||||||||| || ||||||   ||||||||||||||||||| ||||||||||||||||||||||||    
T  28371086 taaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttgaatgattttgaatacca 28371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 41725321 - 41725205
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||| ||||||||||  ||   |||||||||||||  |    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaat---ttaaacaatccttcaa 41725225  T
Q  169 aatttgaatgattttgaata 188  Q
    ||||||||||||||||||||    
T  41725224 aatttgaatgattttgaata 41725205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 30967316 - 30967429
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||| || ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||||||||    
T  30967316 aagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcctttga 30967405  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  30967406 aatttgaatgattttgaataccac 30967429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 11090510 - 11090435
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11090510 caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 36479249 - 36479361
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||||           ||||||||||||||||  |||||||||| ||||||| ||    
T  36479249 aagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-----------aaaatccatcaaaatccaatttattaaataatccttcga 36479337  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||| ||||||||||||||    
T  36479338 aatttgaataattttgaataccac 36479361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 71 - 177
Target Start/End: Complemental strand, 20021531 - 20021424
Alignment:
Q  71 gaaatctcatgttttcatgaaagactttttcat-gctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaa 169  Q
    ||||||| |||| ||||||||||| |||||  | | |||||||||| || ||||||||| |||||||| |||||||| ||||||||||||||||||| ||    
T  20021531 gaaatcttatgtcttcatgaaagattttttttttgttaaaatttcattaaaaaatcccataaaatccagcaaaatctaatttattaaacaatcctttaaa 20021432  T
Q  170 atttgaat 177  Q
    ||||||||    
T  20021431 atttgaat 20021424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 29649731 - 29649797
Alignment:
Q  126 ccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||  ||||||||||||||| || ||||||||||||||||||||||||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccac 29649797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 5800164 - 5800054
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    |||||| || ||||||| |||||||||||| || ||||||| | ||| |||||| |||||||||||          ||||||||||||||||||||||||    
T  5800164 aaatcttatcttttcattaaagactttttcttgttaaaattactctacaaaatctcacaaaatcca----------atttattaaacaatcctttgaaat 5800075  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  5800074 ttgaatgattttgaataccac 5800054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 28484093 - 28483975
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||| ||||||||||| | |||||||||||||||||||| || |||| || ||||| ||||||| ||||||||||          |||||||||| ||||    
T  28484093 aatcttaagaaatctcgtcttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatcca----------atttattaaataatc 28484005  T
Q  163 ctttgaaatttgaatgattttgaataccac 192  Q
    ||| ||||||||||||||||||||||||||    
T  28484004 cttcgaaatttgaatgattttgaataccac 28483975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 68 - 192
Target Start/End: Original strand, 41581795 - 41581918
Alignment:
Q  68 taagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 166  Q
    ||||||||||||||||| ||||||| | ||||| |||| |||||||||||||||||||||||||||||  |||  ||||  ||||||||||||||  ||     
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatc--aatccaatttattaaacaattattc 41581892  T
Q  167 gaaatttgaatgattttgaataccac 192  Q
     |||||||||||| | | ||||||||    
T  41581893 aaaatttgaatgactctaaataccac 41581918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 32684065 - 32684118
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  32684065 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 32684118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 49834890 - 49834943
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  49834890 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 49834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 49501526 - 49501641
Alignment:
Q  69 aagaaatctcatgttttcat--gaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 166  Q
    |||||||||||| |||| ||  ||||||||||||| || ||||||| ||||| ||||| ||||||||||||          ||||||||||||||| ||     
T  49501526 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49501615  T
Q  167 gaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||| ||||    
T  49501616 gaaatttgaatgattttgaatgccac 49501641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 49507591 - 49507706
Alignment:
Q  69 aagaaatctcatgttttcat--gaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 166  Q
    |||||||||||| |||| ||  ||||||||||||| || ||||||| ||||| ||||| ||||||||||||          ||||||||||||||| ||     
T  49507591 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49507680  T
Q  167 gaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||| ||||    
T  49507681 gaaatttgaatgattttgaatgccac 49507706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 50018437 - 50018327
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| ||||| |||||||||||||| || ||||||| |||||          |||||||||| |||||   ||||||||||||||||||  ||||    
T  50018437 aaatctcatcttttcttgaaagactttttcttgttaaaattacacta----------caaaatccattaaaattcaatttattaaacaatccttcaaaat 50018348  T
Q  172 ttgaatgattttgaataccac 192  Q
    ||||||||| |||||||||||    
T  50018347 ttgaatgatcttgaataccac 50018327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 32684018 - 32684072
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    ||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  32684018 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 32684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 72 - 136
Target Start/End: Original strand, 36727960 - 36728023
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 136  Q
    ||||||||||| | ||||||||| |||||| || ||||||||||||| ||||||| |||||||||    
T  36727960 aaatctcatgtct-catgaaagattttttcttgttaaaatttcactaaaaaatcctacaaaatcc 36728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 49834840 - 49834897
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||| |||| ||||||||||| ||| || ||||||| ||||| |||||||    
T  49834840 aagaaatctcatcttttaatgaaagacttcttcttgttaaaattacactacaaaatcc 49834897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 70 - 103
Target Start/End: Original strand, 55047641 - 55047674
Alignment:
Q  70 agaaatctcatgttttcatgaaagactttttcat 103  Q
    |||||| |||||||||||||||||||||||||||    
T  55047641 agaaatatcatgttttcatgaaagactttttcat 55047674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 12193227 - 12193135
Alignment:
Q  70 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    ||||||||  |||||| ||| |||| ||||| ||||| ||| ||||||| | | |||||||||||||| ||||||   | |||||||||||||    
T  12193227 agaaatcttgtgttttaatgtaagatttttttatgctgaaaattcactaaatattcccacaaaatccaccaaaattcaacttattaaacaatc 12193135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 151; Significance: 6e-80; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 20498439 - 20498206
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498439 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20498340  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  20498339 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20498240  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  20498239 actttttttaaatgacaaagaatcttgattgaat 20498206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 19254033 - 19253824
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19254033 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 19253934  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  19253933 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 19253834  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  19253833 ttgattgaat 19253824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 996062 - 996295
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  996062 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 996161  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       |||||||||||| || | |||||||||||||||    
T  996162 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 996261  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||| ||||||||||||||||||    
T  996262 acttttttgaaatgataaagaatcttgattgaat 996295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 10139122 - 10139355
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139122 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 10139221  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  10139222 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 10139321  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||| || |||||||||||||||    
T  10139322 actttttttaaatgataaggaatcttgattgaat 10139355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 33807798 - 33808008
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807798 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33807897  T
Q  162 cctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaat 260  Q
    |||| ||||||||||||||||||||||||||| ||         ||||||||||||||| | |||||||||||||||||       ||||||||||||||    
T  33807898 ccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaat 33807997  T
Q  261 cttgattgaat 271  Q
    ||| |||||||    
T  33807998 cttaattgaat 33808008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 3999645 - 3999854
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3999645 caatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3999744  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  |        ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  3999745 ccttcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 3999844  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  3999845 ttgattgaat 3999854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 38 - 239
Target Start/End: Original strand, 3206181 - 3206382
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3206181 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 3206280  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  3206281 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 3206380  T
Q  238 ac 239  Q
    ||    
T  3206381 ac 3206382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 37820453 - 37820686
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  37820453 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatcca 37820552  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       |||||||||||| || | |||||||||||||||    
T  37820553 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaag 37820652  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |        |||||||||||||||||||||||||    
T  37820653 aatttttttaaatgacaaagaatcttgattgaat 37820686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 68 - 271
Target Start/End: Original strand, 33996547 - 33996750
Alignment:
Q  68 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttg 167  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  168 aaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgatt 267  Q
    ||||||||||||||||||||||||||| |        ||||||||||||||| | |||||||||||||||||       |||||||||||||||||||||    
T  33996647 aaatttgaatgattttgaataccactggattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgatt 33996746  T
Q  268 gaat 271  Q
    ||||    
T  33996747 gaat 33996750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 6589770 - 6589561
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6589770 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataat 6589671  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
     ||| |||||||||||||||||||||||||||  ||       || |||||||||||| | |||||||||||||||||       ||||||||| ||||     
T  6589670 tcttcgaaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccacaagactttttttaaatgacaaggaata 6589571  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  6589570 ttgattgaat 6589561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 29448858 - 29449067
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29448858 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 29448957  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       |||||||| |||||| | |||||||| ||||||||       ||||||||| |||||    
T  29448958 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattgagagtcttgattgaatatcacaagactttttgtaaatgacaaggaatc 29449057  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  29449058 ttgattgaat 29449067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 25418572 - 25418363
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25418572 caatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25418473  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||||| ||||||||||||||||||||||| ||  |        |||||||||| |||| | |||||||||||||||||       |||||||||||||||    
T  25418472 cctttcaaatttgaatgattttgaataccgctagattttttgtaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatc 25418373  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  25418372 ttgattgaat 25418363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 35337963 - 35337732
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35337963 tagtaaaatcttaaaagaaaaaaacaatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatcca 35337866  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||  ||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  35337865 tcaaaatctgatttattaaacaatccttcgaaatttgaatttttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 35337766  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       ||||||||| |||||||||||||||    
T  35337765 acttttttaaaatgacaaggaatcttgattgaat 35337732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 40247050 - 40246841
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40247050 caatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 40246951  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||||  ||||||||||||||||||||||||||  ||       || ||||||| |||| | |||||||||||||| ||       |||||||||||||||    
T  40246950 ccttccaaatttgaatgattttgaataccactagactttttttaactgattaatagtcttgattgaataccacaaaactttttttaaatgacaaagaatc 40246851  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  40246850 ttgattgaat 40246841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 62 - 238
Target Start/End: Complemental strand, 54625798 - 54625622
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54625798 caatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 54625699  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaaga 238  Q
    |||| ||||||||||| |||||||||||||||  ||       ||||||||||||||| | ||||||||| ||||||    
T  54625698 ccttcgaaatttgaataattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaaga 54625622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 44762037 - 44762246
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44762037 caatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44762136  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||| |||||| ||||| |||||||||  ||       ||||||||||||||| | ||||||||| ||| |||       |||||||||||||||    
T  44762137 ccttcgaaacttgaataattttaaataccactagactttttttaagtgattaagagtcttgattgaatactacatgactttttttaaatgacaaagaatc 44762236  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  44762237 ttgattgaat 44762246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 62 - 270
Target Start/End: Original strand, 53929128 - 53929336
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  53929128 caatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaaacaat 53929227  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    | || || |||| |||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  53929228 cgttcgatatttaaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 53929327  T
Q  262 ttgattgaa 270  Q
    |||||||||    
T  53929328 ttgattgaa 53929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 77 - 271
Target Start/End: Original strand, 51699495 - 51699688
Alignment:
Q  77 tcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaa 176  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||| ||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  177 tgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||||||||||||||||| |         ||||||||||||||| | ||||||||||||||||        |||||||||||||||||||||||||    
T  51699595 tgattttgaataccact-agatttttttaagtgattaagagtcttgattgaataccacaagattttttttaaatgacaaagaatcttgattgaat 51699688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 63 - 271
Target Start/End: Complemental strand, 52114734 - 52114525
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||||||||||||||||||||||||  ||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  52114734 aatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatctatcaaaatctgatttattaaacaatc 52114635  T
Q  163 ctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||  ||||||||||| ||||||||||||||| ||         |||||||||| |||| | |||||||||||||||||       |||||||||||||||    
T  52114634 ctgcgaaatttgaattattttgaataccactagacttttttttaagtgattaaaagtcttgattgaataccacaagactttttttaaatgacaaagaatc 52114535  T
Q  262 ttgattgaat 271  Q
    ||| ||||||    
T  52114534 ttggttgaat 52114525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 6035053 - 6035179
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  6035053 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctaatttattaaacatt 6035152  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
     ||| ||||||||||||||||||||||    
T  6035153 gcttcgaaatttgaatgattttgaata 6035179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 69 - 271
Target Start/End: Complemental strand, 17946487 - 17946285
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  17946487 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 17946388  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    |||||||||||||||||||| |||   ||       ||||||| || |||| | |||||||||| ||||||       ||||||||||||||||||||||    
T  17946387 aatttgaatgattttgaatatcacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagaatcttgattg 17946288  T
Q  269 aat 271  Q
    |||    
T  17946287 aat 17946285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 62 - 191
Target Start/End: Complemental strand, 5825268 - 5825139
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  5825268 caatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaat 5825169  T
Q  162 cctttgaaatttgaatgattttgaatacca 191  Q
    ||||  ||||||||||||||||||||||||    
T  5825168 ccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 18749811 - 18749688
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  18749811 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 18749712  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  18749711 aatttgaatgattttgaataccac 18749688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 54629043 - 54628920
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54629043 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54628944  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  54628943 aatttgaatgattttgaataccac 54628920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 40897343 - 40897221
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  40897343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 40897244  T
Q  169 aatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||    
T  40897243 aatttgaatgattttgaatacca 40897221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 6131233 - 6131321
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131233 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 6131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 69 - 271
Target Start/End: Original strand, 34484037 - 34484239
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  34484037 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34484136  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||  |||       || |||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  34484137 aatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 34484236  T
Q  269 aat 271  Q
    |||    
T  34484237 aat 34484239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 32580375 - 32580252
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||||  |||||||||||||||||| ||    
T  32580375 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaaacaatccttcga 32580276  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  32580275 aatttgaatgattttgaataccac 32580252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 36674137 - 36674260
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |    
T  36674137 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 36674236  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  36674237 aatttgaatgattttgaataccac 36674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 271
Target Start/End: Original strand, 44906520 - 44906722
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||||| ||    
T  44906520 aagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 44906619  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  44906620 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 44906719  T
Q  269 aat 271  Q
    |||    
T  44906720 aat 44906722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 11431725 - 11431602
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||||||||||||| |||||||  |||||||||||||||||| ||    
T  11431725 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcga 11431626  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||| ||||||||||||||||||    
T  11431625 aatttaaatgattttgaataccac 11431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 271
Target Start/End: Complemental strand, 29030203 - 29030003
Alignment:
Q  70 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaa 169  Q
    ||||||||||||||||||| ||| |    |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||  ||    
T  29030203 agaaatctcatgttttcataaaaaaaaaattcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcaaa 29030104  T
Q  170 atttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattga 269  Q
    |||||||||||||||||||||||   ||       ||||||||||||||| | |||||||||||||||||       |||||||||||| |||| |||||    
T  29030103 atttgaatgattttgaataccacaagac-ttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagagtcttaattga 29030005  T
Q  270 at 271  Q
    ||    
T  29030004 at 29030003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 193
Target Start/End: Complemental strand, 22057933 - 22057837
Alignment:
Q  97 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact 193  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccact 22057837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 26107460 - 26107337
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||||| |||||| |||||||||||||||||||  |||||||||||||||||| ||    
T  26107460 aagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaaacaatccttcga 26107361  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  26107360 aatttgaatgattttgaataccac 26107337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 27899540 - 27899420
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |          |||||||||||||||||||||||    
T  27899540 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccta----------caaaatctgatttattaaacaat 27899451  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    |||| ||||||||||||||||||||||||||    
T  27899450 ccttcgaaatttgaatgattttgaataccac 27899420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 116 - 271
Target Start/End: Original strand, 1440006 - 1440162
Alignment:
Q  116 ctagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaag 215  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       |||||||||||    
T  1440006 ctagaaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaag 1440105  T
Q  216 agtccttattgaataccacaagac-nnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||| | |||||||||||||| ||        |||||||||||||||||||||||||    
T  1440106 agtcttgattgaataccacaaaacttttttttaaatgacaaagaatcttgattgaat 1440162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 31646293 - 31646414
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||||||  ||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| ||||||||||| || ||    
T  31646293 aagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatctttcga 31646390  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  31646391 aatttgaatgattttgaataccac 31646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 62 - 165
Target Start/End: Original strand, 1439894 - 1439997
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||| ||||||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1439894 caatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatctatcaaaatctaatttattaaacaat 1439993  T
Q  162 cctt 165  Q
    ||||    
T  1439994 cctt 1439997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 48379356 - 48379233
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||| || |||||||||||||| ||||| |  ||||||| ||||| |||||||||||||||||||||||||   |||||||||||||||||| ||    
T  48379356 aagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 48379257  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  48379256 aatttgaatgattttgaataccac 48379233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 50903247 - 50903370
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||| ||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||       
T  50903247 aagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttctt 50903346  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  50903347 aatttgaatgattttgaataccac 50903370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 192
Target Start/End: Original strand, 51737746 - 51737856
Alignment:
Q  82 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgatt 181  Q
    |||| ||||||||||||||| || ||||||| ||| | ||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||||    
T  51737746 tttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 51737845  T
Q  182 ttgaataccac 192  Q
    |||||||||||    
T  51737846 ttgaataccac 51737856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 52810577 - 52810454
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| | ||| |||||||||||||||||||||||||   ||||||||||||||| ||  |    
T  52810577 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttattaaacaatcattcaa 52810478  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  52810477 aatttgaatgattttgaataccac 52810454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 271
Target Start/End: Original strand, 52617978 - 52618174
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||| ||      |||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  52617978 aagaaatctcatctttttatgaaagacttgtt------aaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 52618071  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  52618072 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 52618171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 20833187 - 20833068
Alignment:
Q  73 aatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatt 172  Q
    ||||| || ||||||||||| |||||||| || ||||||| |||||  ||||| |||||||||||||||||||  ||||||||||||||||||   ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  173 tgaatgattttgaataccac 192  Q
    ||||||||||||||||||||    
T  20833087 tgaatgattttgaataccac 20833068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 193
Target Start/End: Complemental strand, 52080117 - 52080002
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||      |||||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||    
T  52080117 caatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatc----------tgatttattaaacaat 52080034  T
Q  162 cctttgaaatttgaatgattttgaataccact 193  Q
    ||||  ||||||||||||||||||||||||||    
T  52080033 ccttcaaaatttgaatgattttgaataccact 52080002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 94 - 188
Target Start/End: Complemental strand, 55235359 - 55235264
Alignment:
Q  94 actttttcatgctaaaatttcactagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaata 188  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||| |  ||||||||||||||| || ||||||||||||||||||||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaata 55235264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 69 - 271
Target Start/End: Original strand, 10728658 - 10728850
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  ||||||||||||||||||  |    
T  10728658 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcca 10728747  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||| ||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  10728748 aatttgaatgattttaaataccacaagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 10728847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 115
Target Start/End: Original strand, 33807680 - 33807733
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807680 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 33807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 10660675 - 10660611
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  10660675 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 10660611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 37455050 - 37454937
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||| ||          ||||||||||||||| || ||    
T  37455050 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattca----------atttattaaacaatcattcga 37454961  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  37454960 aatttgaatgattttgaataccac 37454937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 191
Target Start/End: Complemental strand, 44276580 - 44276466
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    ||||| || ||||||||||| ||||||||||| |||||| || ||||||||||||||||||||||||||||||||          |||||||||||||||    
T  44276580 aatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatc 44276491  T
Q  163 ctttgaaatttgaatgattttgaatacca 191  Q
    ||    |||||||||||||||||||||||    
T  44276490 ct----aatttgaatgattttgaatacca 44276466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 39842494 - 39842610
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||| |||||||||||| |||||||||||||||||||| || ||||||| || ||          |||||||| ||||||||| ||||||||||||||    
T  39842494 caatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacatta----------caaaatccgtcaaaatctaatttattaaacaat 39842583  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
     ||| ||||||||||||||||||||||    
T  39842584 tcttcgaaatttgaatgattttgaata 39842610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 271
Target Start/End: Complemental strand, 39038229 - 39038037
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||| ||| ||    
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaattcttcga 39038140  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    |||||||||||||||| |||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  39038139 aatttgaatgattttggataccacaagacttttttaaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 39038040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 50762067 - 50762180
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||          ||||||||||||||||||  |||||| |||||||| || ||    
T  50762067 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacact----------acaaaatccatcaaaatccaatttatcaaacaatcattcga 50762156  T
Q  169 aatttgaatgattttgaataccac 192  Q
    |||| |||||||||||||||||||    
T  50762157 aattagaatgattttgaataccac 50762180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 6975924 - 6975822
Alignment:
Q  80 tgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatga 179  Q
    ||||||||||||||||| ||||||||| |||||| |||||||||||||||||| ||||          ||||| |||| ||| ||| |||||||||||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattcca----------atttagtaaataattcttcgaaatttgaatga 6975835  T
Q  180 ttttgaataccac 192  Q
    |||||||||||||    
T  6975834 ttttgaataccac 6975822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 539476 - 539534
Alignment:
Q  134 tccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||  |||||||||| ||||||| ||||||||||||||||||||||||||    
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccac 539534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 23753463 - 23753595
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaaga 238  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||   ||       || |||| || |||| | |||||||||| |||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaaatgatgaaaagtcttgattgaatacctcaaga 23753562  T
Q  239 cnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |       |||||||||||||||||||||||||    
T  23753563 cttttttaaaatgacaaagaatcttgattgaat 23753595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 45863040 - 45862983
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  45863040 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 15492874 - 15492942
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    ||||||||| |||  ||||||||||| |||||| || |||||||||||||||| |||| ||||||||||    
T  15492874 aagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatcca 15492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 125
Target Start/End: Complemental strand, 12103789 - 12103733
Alignment:
Q  70 agaaatctca-tgttttcatgaaagactttttcatgctaaaatttcactagaaaatc 125  Q
    |||||||||| ||| |||||||||||||| ||| || ||||||||||||||||||||    
T  12103789 agaaatctcaatgtcttcatgaaagacttattcttgttaaaatttcactagaaaatc 12103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 23535890 - 23535941
Alignment:
Q  141 aaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||| ||| ||||||| ||||||  |||||||||||||||||||||||||    
T  23535890 aaatctaattaattaaacgatccttctaaatttgaatgattttgaataccac 23535941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 23753414 - 23753470
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||| ||| |||||||||||||||| || ||||||| ||||| |||||||    
T  23753414 aagaaatctcatcttt-catgaaagactttttcttgttaaaattacactacaaaatcc 23753470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 6e-80; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 31170602 - 31170835
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31170602 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 31170701  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  31170702 tcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 31170801  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  31170802 actttttttaaatgacaaagaatcttgattgaat 31170835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 24776563 - 24776354
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776563 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24776464  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  24776463 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 24776364  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  24776363 ttgattgaat 24776354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 14198555 - 14198788
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14198555 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatcca 14198654  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||       ||||||||||||||| | |||||||||||||||    
T  14198655 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaag 14198754  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||| ||||||||||    
T  14198755 actttttttaaatgacaaagaattttgattgaat 14198788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 16269923 - 16269690
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16269923 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatcca 16269824  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  16269823 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 16269724  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  16269723 actttttttaaatgacaaagaatcttgattgaat 16269690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 20605468 - 20605235
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20605468 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 20605369  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  20605368 tcaaaatctgatttattaaacaatccttcgaaattttaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 20605269  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  20605268 actttttttaaatgacaaagaatcttgattgaat 20605235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 12407612 - 12407379
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12407612 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatcca 12407513  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||  ||       |||||||||||||||   |||||||||||||||    
T  12407512 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaag 12407413  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  12407412 actttttttaaatgacaaagaatcttgattgaat 12407379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 43847878 - 43847645
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||    
T  43847878 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatcca 43847779  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||  ||       ||||||||||||||| | |||||||||||||||    
T  43847778 tcaaattctgatttattaaacaatccttcgaaatttgaatgattttgaatacaactagactttttttaagtgattaagagtcttgattgaataccacaag 43847679  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  43847678 actttttttaaatgacaaagaatcttgattgaat 43847645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 5093049 - 5093258
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5093049 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 5093148  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||||  |||||||||||||||||||||| |||  ||       ||||||||||| ||| | |||||||||||||||||       |||||||||||||||    
T  5093149 ccttcaaaatttgaatgattttgaatactactagactttttttaagtgattaagcgtcttgattgaataccacaagactttttttaaatgacaaagaatc 5093248  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  5093249 ttgattgaat 5093258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 305443 - 305676
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  305443 tagtaaaatcttaaaagaaataaacaatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatcca 305542  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    || |||||||||||||||||||||| ||  ||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  305543 tcgaaatctgatttattaaacaatcattcaaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 305642  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||| ||||||||||||||    
T  305643 acttttttcaaatgacaaataatcttgattgaat 305676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 35317294 - 35317061
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35317294 tagtaaaatcttaaaagaaaaaaacaatgttaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 35317195  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||  |||||    
T  35317194 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatattacaag 35317095  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  35317094 actttttttaaatgacaaagaatcttgattgaat 35317061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 22551741 - 22551974
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22551741 tagtaaaatcttaaaaggaaaaaacaatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 22551840  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||| | ||||| ||||||||| || ||||||||||| |||||||||||||||  ||       |||||||||| |||| | |||||||||||||||    
T  22551841 tcaaaatttaatttaataaacaatcattcgaaatttgaataattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacaag 22551940  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  22551941 actttttttaaatgacaaagaatcttgattgaat 22551974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 68 - 193
Target Start/End: Complemental strand, 32125455 - 32125330
Alignment:
Q  68 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttg 167  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32125455 taagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 32125356  T
Q  168 aaatttgaatgattttgaataccact 193  Q
    ||||||||||||||||||||||||||    
T  32125355 aaatttgaatgattttgaataccact 32125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 82 - 271
Target Start/End: Complemental strand, 1789630 - 1789441
Alignment:
Q  82 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgatt 181  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  182 ttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||||||||||||  ||       ||||||||||||||  | |||||||| || |||||       |||||||||||||||||||||||||    
T  1789530 ttgaataccactagactttttttaagtgattaagagttttgattgaatatcataagactttttttaaatgacaaagaatcttgattgaat 1789441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 38 - 193
Target Start/End: Complemental strand, 9120358 - 9120203
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  9120358 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatcca 9120259  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact 193  Q
    ||||||||| ||||||||||||||||||| |||| |||||||||||||||| ||||    
T  9120258 tcaaaatctaatttattaaacaatcctttaaaatctgaatgattttgaatatcact 9120203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 44765974 - 44765774
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44765974 caatcctaagaaatctcatgttttcatgaaa---------atgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 44765884  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    | || |||||||||||||||||||||||||||  ||       |||||||||||||||   |||||||||||||||||       |||||||||||||||    
T  44765883 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtctcgattgaataccacaagactttttttaaatgacaaagaatc 44765784  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  44765783 ttgattgaat 44765774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 271
Target Start/End: Complemental strand, 28844756 - 28844554
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||    
T  28844756 aagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaaacaatccttcga 28844657  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  28844656 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 28844557  T
Q  269 aat 271  Q
    |||    
T  28844556 aat 28844554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 271
Target Start/End: Complemental strand, 33135823 - 33135622
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  33135823 aagaaatctcatttttt-atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 33135725  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  33135724 aatttgaatgattttgaataccacgagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 33135625  T
Q  269 aat 271  Q
    |||    
T  33135624 aat 33135622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 271
Target Start/End: Complemental strand, 18177468 - 18177266
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| || |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||||| ||    
T  18177468 aagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcga 18177369  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||  |||       || |||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  18177368 aatttgaatgattttgaataccacaaaactttttttaaatgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 18177269  T
Q  269 aat 271  Q
    |||    
T  18177268 aat 18177266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 10657607 - 10657484
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||| |||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| || ||    
T  10657607 aagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 10657508  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  10657507 aatttgaatgattttgaataccac 10657484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 25288360 - 25288237
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||| || || || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||||| ||    
T  25288360 aagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 25288261  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  25288260 aatttgaatgattttgaataccac 25288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 192
Target Start/End: Complemental strand, 26788969 - 26788864
Alignment:
Q  87 atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaa 186  Q
    ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  26788969 atgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaa 26788870  T
Q  187 taccac 192  Q
    ||||||    
T  26788869 taccac 26788864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 180
Target Start/End: Complemental strand, 43078764 - 43078653
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||| || |||| |||||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||  ||||||||||||||| || ||    
T  43078764 aagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatcattcga 43078665  T
Q  169 aatttgaatgat 180  Q
    ||||||||||||    
T  43078664 aatttgaatgat 43078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 10125302 - 10125418
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||| |||||| ||||||||||||||| || ||||||||||||| ||||||||||||||| ||          ||||||||||||||    
T  10125302 caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattca----------atttattaaacaat 10125391  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
    |||||||||||||||||||||||||||    
T  10125392 cctttgaaatttgaatgattttgaata 10125418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 271
Target Start/End: Original strand, 28740302 - 28740494
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||          |||||||||||||||||||  |||||||||||||||||| ||    
T  28740302 aagaaatctcatctttttatgaaagactttttcttgttaaaattacac----------cacaaaatccatcaaaatccaatttattaaacaatccttcga 28740391  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  28740392 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 28740491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 3463863 - 3463750
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||||||    
T  3463863 aagaaatctcatattttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 3463774  T
Q  169 aatttgaatgattttgaataccac 192  Q
    || |||||||||||| ||||||||    
T  3463773 aaattgaatgattttaaataccac 3463750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 191
Target Start/End: Original strand, 13833441 - 13833553
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| || ||||||||||||||||| || ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||  |    
T  13833441 aagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcaa 13833530  T
Q  169 aatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||    
T  13833531 aatttgaatgattttgaatacca 13833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 7026746 - 7026682
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  7026746 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 7026682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 26601214 - 26601379
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||| |||||| |||||||||| ||| ||||||  ||| |||| ||||||||||||||||||||||          ||||||||||||||||||     
T  26601214 caatcctaaaaaatct-atgttttcatcaaaaactttta-atgttaaagtttcactagaaaatcccacaaa----------atctgatttattaaacaaa 26601301  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagac 239  Q
    | || ||||||||||||||||||||||||||   ||       ||||||||||||||| | ||||||||| |||||||    
T  26601302 cattcgaaatttgaatgattttgaataccacgtgactttttttaagtgattaagagtcttgattgaatactacaagac 26601379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 128 - 191
Target Start/End: Complemental strand, 379079 - 379016
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacca 191  Q
    |||||||| |||||||||  ||||||||||||||||||  ||||||||||||||||||||||||    
T  379079 acaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 3574978 - 3574929
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaata 188  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 3574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 6224576 - 6224633
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  6224576 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 6224633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 192
Target Start/End: Original strand, 215320 - 215357
Alignment:
Q  155 aaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  215320 aaacaatcctttgaagtttgaatgattttgaataccac 215357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 6224626 - 6224679
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||  |||||||||| ||||||| ||||||||||| ||||||||||||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccac 6224679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 215249 - 215303
Alignment:
Q  71 gaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  215249 gaaatctcatcttttcatgaaagactttttc-tgttaaaattacactacaaaatcc 215303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 271
Target Start/End: Complemental strand, 20605209 - 20605151
Alignment:
Q  213 aagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||||||| | |||||||||||||||||       |||||||||||||||||||||||||    
T  20605209 aagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaat 20605151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 21370638 - 21370682
Alignment:
Q  148 atttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||| ||||||| |||  |||||||||||||||||||||||||    
T  21370638 atttatcaaacaatacttcaaaatttgaatgattttgaataccac 21370682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 6e-80; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 49198245 - 49198477
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 49198344  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||     
T  49198345 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactgaactttttttaagtgattaagagt-cttattgaataccacaaa 49198443  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  49198444 actttttttaaatgacaaagaatcttgattgaat 49198477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 19451784 - 19452017
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19451784 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 19451883  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||| |||||||||||    
T  19451884 tcaaaatctgatttattaaacgatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattaaataccacaag 19451983  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  19451984 actttttttaaatgacaaagaatcttgattgaat 19452017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 21222371 - 21222138
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  21222371 tagtaaaatcttaaaagaaaataacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 21222272  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||  ||       ||||||||||||||| | |||||||||||||||    
T  21222271 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatacctctagactttttttaagtgattaagagtcttgattgaataccacaag 21222172  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  21222171 actttttttaaatgacaaagaatcttgattgaat 21222138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 50192526 - 50192760
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50192526 tagtaaaatcttaaaagaaaaaaacaatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 50192625  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaataccacaa 236  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||         ||||||||||||||| | ||||||||||||||    
T  50192626 tcaaaatctgatttattaaacaatccttcaaaatttgaatgattttgaataccactagacttttttttaagtgattaagagtcttgattgaataccacaa 50192725  T
Q  237 gacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||       ||||||||| |||||||||||||||    
T  50192726 gacttttttaaaatgacaaggaatcttgattgaat 50192760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 6304252 - 6304462
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304252 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6304351  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtcctt-attgaataccacaagacnnnnnnnaaatgacaaagaat 260  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||  ||  ||||||||||||||||       ||||||||||||||    
T  6304352 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtttttggttgaataccacaagactttttttaaatgacaaagaat 6304451  T
Q  261 cttgattgaat 271  Q
    |||||||||||    
T  6304452 cttgattgaat 6304462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 35279872 - 35279663
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35279872 caattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35279773  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| ||||||| |||||||||||||||||||  ||       |||||||||| |||| | |||||||||||||||||       |||||||||||||||    
T  35279772 ccttcgaaatttaaatgattttgaataccactagactttttttaagtgattaatagtcttgattgaataccacaagactttttttaaatgacaaagaatc 35279673  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  35279672 ttgattgaat 35279663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 45759985 - 45760219
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  45759985 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatcca 45760084  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||||||| |    
T  45760085 tcaaaatctgatttattaaacaatccttcgaagtttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacatg 45760184  T
Q  238 acnnnnnnnaaa-tgacaaagaatcttgattgaat 271  Q
    ||       ||| ||||||||||||||||||||||    
T  45760185 actttttttaaattgacaaagaatcttgattgaat 45760219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 47654327 - 47654561
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||||    
T  47654327 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatcca 47654426  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaataccacaa 236  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||         ||||||||||||||  | ||||||||||||||    
T  47654427 tcaaaatctgatttattaaacaatccttcgaaatttgaataattttgaataccactagacttttttttaagtgattaagagttttgattgaataccacaa 47654526  T
Q  237 gacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||       |||||||||||||||||||||||||    
T  47654527 gacttcttttaaatgacaaagaatcttgattgaat 47654561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 35679128 - 35679337
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  35679128 caatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaat 35679227  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| ||||||||||||||||||||||||||   ||       ||||||||||||||| | ||||||||| ||||||        |||||||||||||||    
T  35679228 ccttcgaaatttgaatgattttgaataccacatgactttttttaagtgattaagagtcttgattgaatactacaagattttttttaaatgacaaagaatc 35679327  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  35679328 ttgattgaat 35679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 67 - 235
Target Start/End: Complemental strand, 49418279 - 49418111
Alignment:
Q  67 ctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 166  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49418279 ctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 49418180  T
Q  167 gaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccaca 235  Q
    |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||    
T  49418179 gaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccaca 49418111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 28824349 - 28824581
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||||||||||||| || ||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  28824349 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatcca 28824448  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||   ||       ||||||||||||||| | |||||||||||||||    
T  28824449 tcaaaatctgatttattaaacaat-cttcgaaatttgaatgattttgaataccacaagactgtttttaagtgattaagagtcttgattgaataccacaag 28824547  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||| ||||||||||||||    
T  28824548 actttttttaaatgacaaataatcttgattgaat 28824581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 47780935 - 47780702
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  47780935 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatcca 47780836  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||||||| || |||||||||||||||||| ||||  ||       ||||||||||||||| | ||||||||||||| |    
T  47780835 tcaaaatctgatttattaaacaatccttttaattttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47780736  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||| | ||||||||||||||    
T  47780735 actttttttaaatgacatataatcttgattgaat 47780702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 45536150 - 45535935
Alignment:
Q  62 caatcctaagaaatctcatgttttc------atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 155  Q
    |||||||||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45536150 caatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 45536051  T
Q  156 aacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaa 255  Q
    ||||||| || |||||||||||||||||||||||||||  ||       ||| ||||||||||| | |||||||||||||| ||       |||||||||    
T  45536050 aacaatctttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaacactttgtttaaatgacaa 45535951  T
Q  256 agaatcttgattgaat 271  Q
    ||||| ||||||||||    
T  45535950 agaatattgattgaat 45535935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 39 - 192
Target Start/End: Original strand, 31572174 - 31572327
Alignment:
Q  39 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccat 138  Q
    ||||||||||||||||       |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  31572174 agtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccat 31572273  T
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||    
T  31572274 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 32588963 - 32589083
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||  ||||    
T  32588963 aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatccttcaaaat 32589062  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  32589063 ttgaatgattttgaataccac 32589083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 9577432 - 9577558
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  9577432 caatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaaacaat 9577531  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
    ||||  |||||||||||||||||||||    
T  9577532 ccttctaaatttgaatgattttgaata 9577558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 97 - 271
Target Start/End: Complemental strand, 730314 - 730139
Alignment:
Q  97 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact-ga 195  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccactaga 730215  T
Q  196 acnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
             ||||||||||||||| | |||||||||||||||||       |||||||||||||||||||||||||    
T  730214 cttttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaat 730139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 62 - 239
Target Start/End: Complemental strand, 29556305 - 29556127
Alignment:
Q  62 caatcctaagaaatctcatgt-tttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 160  Q
    ||||||||||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  29556305 caatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaa 29556206  T
Q  161 tcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagac 239  Q
    || || |||||||||||||||||||||| ||||  |        ||||||||||||||| | |||||||| ||||||||    
T  29556205 tctttcgaaatttgaatgattttgaataacactagattttttttaagtgattaagagtcttgattgaataacacaagac 29556127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 6312767 - 6312644
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  6312767 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 6312668  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  6312667 aatttgaatgattttgaataccac 6312644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 25612350 - 25612227
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || |||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  25612350 aagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 25612251  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  25612250 aatttgaatgattttgaataccac 25612227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 29396395 - 29396518
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  29396395 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29396494  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  29396495 aatttgaatgattttgaataccac 29396518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 72 - 192
Target Start/End: Complemental strand, 51701770 - 51701650
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  51701770 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 51701671  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  51701670 ttgaatgattttgaataccac 51701650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 15835060 - 15835183
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  ||||||||||||||||||||     
T  15835060 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatcctttgc 15835159  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  15835160 aatttgaatgattttgaataccac 15835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 48177469 - 48177592
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| || ||    
T  48177469 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 48177568  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  48177569 aatttgaatgattttgaataccac 48177592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 37014640 - 37014766
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||| |||||||    
T  37014640 caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaat 37014739  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
    | || ||||||||||||||||||||||    
T  37014740 ctttagaaatttgaatgattttgaata 37014766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 9322507 - 9322630
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||||   ||||||||||||||||||  |    
T  9322507 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcta 9322606  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  9322607 aatttgaatgattttgaataccac 9322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 70 - 271
Target Start/End: Complemental strand, 46328234 - 46328033
Alignment:
Q  70 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaa 169  Q
    |||||||| || |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||||| |||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  170 atttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattga 269  Q
    |||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| ||||||||||    
T  46328134 atttgaatgattttgaataccacgagactttttgtaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattga 46328035  T
Q  270 at 271  Q
    ||    
T  46328034 at 46328033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 91 - 188
Target Start/End: Complemental strand, 48524490 - 48524393
Alignment:
Q  91 aagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaata 188  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaata 48524393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 28387400 - 28387523
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||  || |||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  28387400 aagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28387499  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||| ||||||||||||    
T  28387500 aatttgaatgaatttgaataccac 28387523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 33025703 - 33025503
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||          |||||||| |||||||||||    
T  33025703 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaa----------aatctgatgtattaaacaat 33025614  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtcctt-attgaataccacaagacnnnnnnnaaatgacaaagaat 260  Q
    ||||  |||||||||||||||||||||||||   ||       ||||||||||||||  || ||||||||||||||||        ||||| ||||||||    
T  33025613 ccttcaaaatttgaatgattttgaataccacaagactttttttaagtgattaagagtttttgattgaataccacaagaatttttaaaaatgtcaaagaat 33025514  T
Q  261 cttgattgaat 271  Q
    |||||||||||    
T  33025513 cttgattgaat 33025503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 38536106 - 38536219
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||||||    
T  38536106 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38536195  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||| ||||||||||||||    
T  38536196 aatttgaataattttgaataccac 38536219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 38558324 - 38558437
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||||||    
T  38558324 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38558413  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||| ||||||||||||||    
T  38558414 aatttgaataattttgaataccac 38558437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 955882 - 955823
Alignment:
Q  130 aaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatac 189  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 48668785 - 48668905
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||| || ||||||||| |||||||||||||||||||| || ||||||| ||||| | ||||||||||||||||          ||||||||||||||    
T  48668785 caatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatcca----------atttattaaacaat 48668874  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    | || ||||||||||| ||||||||||||||    
T  48668875 ctttcgaaatttgaataattttgaataccac 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 192
Target Start/End: Original strand, 5495117 - 5495226
Alignment:
Q  73 aatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatt 172  Q
    |||||||| ||||||| || ||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||| ||||||||||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaataatcctttgaaatt 5495206  T
Q  173 tgaatgattttgaataccac 192  Q
    | ||||||||||||||||||    
T  5495207 taaatgattttgaataccac 5495226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 29219469 - 29219356
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| |||||          |||||||||||||||||  ||||||||||||||||||       
T  29219469 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttctt 29219380  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  29219379 aatttgaatgattttgaataccac 29219356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 192
Target Start/End: Complemental strand, 51085951 - 51085865
Alignment:
Q  106 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||| ||||||| ||||||||| ||||||||||  ||||||| || |||||||  |||||||||| ||||||||||||||    
T  51085951 taaaatttcacaagaaaattccacaaaattcatcaaaatccaatttatttaataatccttcaaaatttgaattattttgaataccac 51085865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 189
Target Start/End: Original strand, 31622536 - 31622586
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatac 189  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  31622536 caaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 18798614 - 18798561
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 18798561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 162
Target Start/End: Complemental strand, 38320098 - 38320006
Alignment:
Q  70 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccc-acaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||||| |||| |||||||||||||||||||  |||||||| ||||||| |||| ||| |||||||| |||||||||  ||||| |||||||||    
T  38320098 agaaatatcatattttcatgaaagacttttttgtgctaaaa-ttcactaaaaaaacccaacaaaatctatcaaaatcctatttagtaaacaatc 38320006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 192
Target Start/End: Complemental strand, 47784542 - 47784456
Alignment:
Q  96 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||||||||||||| ||||||||||| |||||||||||          ||||||||||||||| || ||| ||||||| ||||||||||||||    
T  47784542 tttttcatgctaaaatttaactagaaaatctcacaaaatcca----------atttattaaacaatctttagaagtttgaataattttgaataccac 47784456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 148 - 271
Target Start/End: Complemental strand, 49231000 - 49230877
Alignment:
Q  148 atttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnna 247  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaa 49230901  T
Q  248 aatgacaaagaatcttgattgaat 271  Q
    ||||||||||| ||||||||||||    
T  49230900 aatgacaaagagtcttgattgaat 49230877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 18798663 - 18798607
Alignment:
Q  70 agaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    ||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||    
T  18798663 agaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 18798607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 48524865 - 48524805
Alignment:
Q  39 agtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttt 99  Q
    ||||||||||||||||       ||||||||| ||||||||||||||||||||||||||||    
T  48524865 agtaaaatcttaaaagaaaaaaccaatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 175 - 271
Target Start/End: Complemental strand, 22183457 - 22183361
Alignment:
Q  175 aatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||||||||||||||||||  ||       |||||||||||| || | |||||||||||||||||       |||||||||||||||||||||||||    
T  22183457 aatgattttgaataccactagactttttttaagtgattaagaatcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaat 22183361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 953876 - 953810
Alignment:
Q  205 aagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||||||||||||||| | || ||||||||||||||       |||||||||||||||||||||||||    
T  953876 aagtgattaagagtcttgatcgaataccacaagactttttttaaatgacaaagaatcttgattgaat 953810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 137
Target Start/End: Complemental strand, 45272765 - 45272700
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    ||||||||| |||| || ||||| |||||| || ||||||| ||||| |||||| |||||||||||    
T  45272765 aaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaaaatcca 45272700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 98 - 126
Target Start/End: Complemental strand, 955904 - 955876
Alignment:
Q  98 tttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||||||||||||||||||||    
T  955904 tttcatgctaaaatttcactagaaaatcc 955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 148; Significance: 4e-78; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 21147274 - 21147065
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147274 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 21147175  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  21147174 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 21147075  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  21147074 ttgattgaat 21147065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 38 - 239
Target Start/End: Original strand, 7016714 - 7016915
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7016714 tagtaaaatcttaaaagaaaaaaacaattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7016813  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||| |||||    
T  7016814 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 7016913  T
Q  238 ac 239  Q
    ||    
T  7016914 ac 7016915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 33656040 - 33656251
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33656040 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33656139  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgac--aaagaa 259  Q
    |||| ||||||||||||||||||||||||| |  |        ||||||||||||||| | |||||||||||||||||       |||||||  ||||||    
T  33656140 ccttcgaaatttgaatgattttgaataccattagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaaaagaa 33656239  T
Q  260 tcttgattgaat 271  Q
    ||||||||||||    
T  33656240 tcttgattgaat 33656251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 68 - 271
Target Start/End: Original strand, 5272924 - 5273127
Alignment:
Q  68 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttg 167  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |    
T  5272924 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcg 5273023  T
Q  168 aaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgatt 267  Q
    ||||||||||||||||||||||||||  ||       || |||||||||||| | ||||||||||| |||||       |||||||||||||||||||||    
T  5273024 aaatttgaatgattttgaataccactagactttttttaaatgattaagagtcttgattgaataccataagactttttttaaatgacaaagaatcttgatt 5273123  T
Q  268 gaat 271  Q
    ||||    
T  5273124 gaat 5273127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 27458925 - 27459157
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  27458925 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatcca 27459024  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||| ||||||||||||||||||  |||| |||||||||||||||||||||  ||       ||||||||||||||| | ||||||||| |||||    
T  27459025 tcaaaatctaatttattaaacaatccttcaaaatctgaatgattttgaataccactagac-ttttttaagtgattaagagtcttgattgaatactacaag 27459123  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       ||||||||||||||||| |||||||    
T  27459124 actttttttaaatgacaaagaatcttaattgaat 27459157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 68 - 271
Target Start/End: Complemental strand, 139474 - 139271
Alignment:
Q  68 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttg 167  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |    
T  139474 taagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcg 139375  T
Q  168 aaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgatt 267  Q
    ||||||||||||||||||||||||||  ||       |||||||||| |||| | ||||||||||||| |||       |||||||||||||||||||||    
T  139374 aaatttgaatgattttgaataccactagactttttttaagtgattaaaagtcttgattgaataccacatgactttttttaaatgacaaagaatcttgatt 139275  T
Q  268 gaat 271  Q
    ||||    
T  139274 gaat 139271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 82 - 239
Target Start/End: Complemental strand, 849334 - 849177
Alignment:
Q  82 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgatt 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  849334 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 849235  T
Q  182 ttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagac 239  Q
    |||||||||| |  ||       ||||||||||||||| | |||||||||||||||||    
T  849234 ttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaagac 849177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 32157869 - 32158106
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagact---ttttcatgctaaaatttcactagaaaatcccacaaaat 134  Q
    |||||||||||||||||       ||||  |||||||||||||||||||||||||||||   ||||| ||||||||||| ||||||||||||||||||||    
T  32157869 tagtaaaatcttaaaagaaaagaacaattttaagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaat 32157968  T
Q  135 ccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaatacca 233  Q
    || ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||         ||||||||| | ||| | |||||||||||    
T  32157969 ccgtcaaaatctaatttattaaacaatccttcgaaatttgaatgattttgaataccactagacttttttttaagtgattaggggtcttgattgaatacca 32158068  T
Q  234 caagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||||||       |||||||||||||||||||||||||    
T  32158069 caagactttttttaaatgacaaagaatcttgattgaat 32158106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 1152102 - 1152311
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||| ||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  1152102 caatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 1152201  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    || | ||||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| ||    
T  1152202 ccctcgaaatttgaatgattttgaataccacaagactttttttaagtgataaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtc 1152301  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  1152302 ttgattgaat 1152311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 14000111 - 14000234
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |    
T  14000111 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14000210  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  14000211 aatttgaatgattttgaataccac 14000234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 96 - 271
Target Start/End: Complemental strand, 6460965 - 6460790
Alignment:
Q  96 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactga 195  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||      
T  6460965 tttttcatgataaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccactag 6460866  T
Q  196 acnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |        || |||||||||||| | ||||||||| ||| |||       |||||||||||||||||||||||||    
T  6460865 attttttttaaatgattaagagtcttgattgaatacgacatgactttttttaaatgacaaagaatcttgattgaat 6460790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 13926131 - 13926008
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||| |||| ||||| |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  13926131 aagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 13926032  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  13926031 aatttgaatgattttgaataccac 13926008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 39852545 - 39852422
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  ||||| |||||||||||| ||    
T  39852545 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatccttcga 39852446  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  39852445 aatttgaatgattttgaataccac 39852422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 4550266 - 4550386
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| ||||||||||||||| |||| || ||||||| ||||| ||||| ||||||||||||||||||||  |||||||||||||||||| |||||    
T  4550266 aaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 4550365  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  4550366 ttgaatgattttgaataccac 4550386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 7947579 - 7947698
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||| | |||||||||||||||||||| || ||||||| ||||| ||||| ||||||||||||||||||||  |||||||||||||||||| ||    
T  7947579 aagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcga 7947678  T
Q  169 aatttgaatgattttgaata 188  Q
    ||||||||||||||||||||    
T  7947679 aatttgaatgattttgaata 7947698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 9689864 - 9689735
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||| ||||||| |||||||||||||||||  |||||||| || |||||||| |||| ||||||||||||||| |||||| |||||||    
T  9689864 caatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaaacaat 9689765  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    | || ||||||| ||||||||| ||||||||    
T  9689764 cattcgaaattt-aatgattttaaataccac 9689735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 192
Target Start/End: Original strand, 14465266 - 14465356
Alignment:
Q  102 atgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||||| | |||||||||| ||||||||| |||||||||| |||||||||||||||| || ||||||||||||||||||||||||||    
T  14465266 atgctaaaatattactagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccac 14465356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 5949298 - 5949185
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||| ||    
T  5949298 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 5949209  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  5949208 aatttgaatgattttgaataccac 5949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 69 - 271
Target Start/End: Original strand, 4240468 - 4240660
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| | |||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||| ||    
T  4240468 aagaaatctcatctattcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 4240557  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  4240558 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 4240657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 22746496 - 22746378
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||| || ||||||||||||| |||||| || ||||||| ||        |||||||||||||||||||||   ||||||||||||||    
T  22746496 caatcttaagaaatcttatcttttcatgaaagagtttttcttgttaaaattaca--------tcccacaaaatccatcaaaattcaatttattaaacaat 22746405  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
    | || ||||||||||||||||||||||    
T  22746404 cattcgaaatttgaatgattttgaata 22746378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 188
Target Start/End: Original strand, 1461203 - 1461263
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaata 188  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||    
T  1461203 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 1461263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 40013718 - 40013827
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||| ||||||  ||| |||||||||||||| ||    
T  40013718 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccattaaaatccaattgattaaacaatccttcga 40013807  T
Q  169 aatttgaatgattttgaata 188  Q
    ||||||||||||||||||||    
T  40013808 aatttgaatgattttgaata 40013827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 188
Target Start/End: Original strand, 9220716 - 9220832
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||| ||||||||||| ||||||||||||| || |||||||| |||| ||||||| |          |||| ||| ||| ||||||||||    
T  9220716 caatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatccta----------caaattctaattcattaaacaat 9220805  T
Q  162 cctttgaaatttgaatgattttgaata 188  Q
    |||| ||||||||||||||||||||||    
T  9220806 ccttagaaatttgaatgattttgaata 9220832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 190
Target Start/End: Complemental strand, 37014044 - 37013993
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacc 190  Q
    |||||||  ||||||||||||| |||| ||||||||||||||||||||||||    
T  37014044 caaaatccaatttattaaacaacccttcgaaatttgaatgattttgaatacc 37013993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 1511349 - 1511426
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagacttttt-catgctaaaatttcactagaaaa-tcccacaaaatcca 137  Q
    ||||||||| |||||| |||||||||| ||||| ||||| ||||| ||||  |||||| |||| ||||||||||||||    
T  1511349 caatcctaaaaaatcttatgttttcataaaagatttttttcatgccaaaaactcactaaaaaaatcccacaaaatcca 1511426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 37014094 - 37014037
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||| |||| ||||||||||||||| || |||||||  |||| |||||||    
T  37014094 aagaaatctcatctttttatgaaagactttttcttgttaaaattatactacaaaatcc 37014037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 1e-77; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 24501788 - 24502021
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501788 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 24501887  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  24501888 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 24501987  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||| ||||||||||||||||||    
T  24501988 actttttttaaatgataaagaatcttgattgaat 24502021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 26374429 - 26374638
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26374429 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 26374528  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  26374529 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatc 26374628  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  26374629 ttgattgaat 26374638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 42938116 - 42938325
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42938116 caatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42938215  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||| ||||    
T  42938216 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataatc 42938315  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  42938316 ttgattgaat 42938325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 2704794 - 2705027
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  2704794 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatcca 2704893  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||| ||||||||||||||||| || |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  2704894 tcaaaatttgatttattaaacaatcattcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 2704993  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  2704994 actttttttaaatgacaaagaatcttgattgaat 2705027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 5576595 - 5576829
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5576595 tagtaaaatcttaaaaggaaaaaacaatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 5576694  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac-tgaacnnnnnnnaagtgattaagagtccttattgaataccacaa 236  Q
    |||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| |||         ||||||||||||||| | ||||||||||||||    
T  5576695 tcaaaatctggtttattaaacaattcttcgaaatttgaatgattttgaataccacttgacttttttttaagtgattaagagtcttgattgaataccacaa 5576794  T
Q  237 gacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||       |||||||||||||||||||||||||    
T  5576795 gactttttttaaatgacaaagaatcttgattgaat 5576829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 42937582 - 42937351
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42937582 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatcca 42937483  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       |||||||||||||||   |||||||||||||||    
T  42937482 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtc--gattgaataccacaag 42937385  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||| ||||||||||||||    
T  42937384 actttttttaaatgacaaaaaatcttgattgaat 42937351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 7506874 - 7507107
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7506874 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 7506973  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  7506974 tcaaaatctgatttattaaacaatccttcaaaatttgaatggttttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 7507073  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       ||||||||| |||||| ||||||||    
T  7507074 acttttcttaaatgacaaggaatctcgattgaat 7507107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 42735252 - 42735485
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42735252 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatcca 42735351  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  42735352 tcaaaatctgatttattaaacaatacttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttaattgaataccacaag 42735451  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
     |       |||||| ||||||||||||||||||    
T  42735452 tctttttttaaatgataaagaatcttgattgaat 42735485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 23115168 - 23115376
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23115168 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 23115267  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||||  |||||||||||| |||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||    
T  23115268 ccttccaaatttgaatga-tttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagacattttttaaatgacaaagaatc 23115366  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  23115367 ttgattgaat 23115376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 63 - 271
Target Start/End: Original strand, 10392237 - 10392445
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10392237 aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 10392336  T
Q  163 ctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatct 262  Q
    ||| ||||||||||||||| |||||||||||  ||       |||||||||| |||| | |||||||| |||||||        ||||||||||||||||    
T  10392337 cttcgaaatttgaatgattctgaataccactagacttttcttaagtgattaaaagtcttgattgaatatcacaagaattttttaaaatgacaaagaatct 10392436  T
Q  263 tgattgaat 271  Q
    |||||||||    
T  10392437 tgattgaat 10392445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 41479318 - 41479095
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||          
T  41479318 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaa------ 41479225  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
        ||||||||||||||||||||| || ||||||||||||||||||||||||| |  ||       ||||||||||||||| | |||||||||||||||    
T  41479224 ----aatctgatttattaaacaatcattcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattgaataccacaag 41479129  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  41479128 actttttttaaatgacaaagaatcttgattgaat 41479095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 4403314 - 4403184
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||| |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||| |  ||||||||||||||    
T  4403314 caatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaat 4403215  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    |||| ||||||||||||||||||||||||||    
T  4403214 ccttcgaaatttgaatgattttgaataccac 4403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 9288463 - 9288586
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||||| ||    
T  9288463 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 9288562  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  9288563 aatttgaatgattttgaataccac 9288586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 14782141 - 14782264
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |    
T  14782141 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14782240  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  14782241 aatttgaatgattttgaataccac 14782264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 44725816 - 44725939
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||  |    
T  44725816 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 44725915  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  44725916 aatttgaatgattttgaataccac 44725939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 10295386 - 10295510
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatcctttg 167  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| |||||||||||||| ||||||||||||  |||||||||||||||||| |    
T  10295386 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttattaaacaatccttcg 10295485  T
Q  168 aaatttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||||||    
T  10295486 aaatttgaatgattttgaataccac 10295510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 43166696 - 43166819
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||| | ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  43166696 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 43166795  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  43166796 aatttgaatgattttgaataccac 43166819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 43959878 - 43959656
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| |||||||||||||||||| || |||||||||||||||||||||||||||          |||||||||||    
T  43959878 tagtaaaatcttaaaagaaaaaaacaatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttcac----------cacaaaatcca 43959789  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||   |       |||||||||||| || | |||||||| ||||||    
T  43959788 tcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaataccactagtcttttttgaagtgattaagaatcttgattgaata-cacaag 43959690  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  43959689 acttttttaaaatgacaaagaatcttgattgaat 43959656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 190
Target Start/End: Original strand, 4950021 - 4950143
Alignment:
Q  68 taagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttg 167  Q
    |||||||||| |||||| ||||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||| ||||    
T  4950021 taagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaaataatcttttg 4950120  T
Q  168 aaatttgaatgattttgaatacc 190  Q
    ||| |||||||||||||||||||    
T  4950121 aaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 18958736 - 18958856
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    |||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||| ||||||  |||||||||||||||||| |||||    
T  18958736 aaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatccttcgaaat 18958835  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  18958836 ttgaatgattttgaataccac 18958856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 19717887 - 19718010
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||| ||||||  |||||||||||||| ||| ||    
T  19717887 aagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaattcttcga 19717986  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  19717987 aatttgaatgattttgaataccac 19718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 39467477 - 39467597
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| ||||||||||||| |||||| || ||||||| ||||| ||||||||| |||||||||||||||   |||||||||||||||||| |||||    
T  39467477 aaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcgaaat 39467576  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  39467577 ttgaatgattttgaataccac 39467597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 26856267 - 26856144
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||| || ||||  |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||| ||| ||    
T  26856267 aagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatacttcga 26856168  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  26856167 aatttgaatgattttgaataccac 26856144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 74 - 271
Target Start/End: Original strand, 32711305 - 32711490
Alignment:
Q  74 atctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaattt 173  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||             |||| ||||||||||||||||||||||||||| |||||||    
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatttcaatagatt-----------tcca-caaaatctgatttattaaacaatccttcgaaattt 32711392  T
Q  174 gaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
     |||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||       |||||||||||||||||||||||||    
T  32711393 aaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaagaatcttgattgaat 32711490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 189
Target Start/End: Original strand, 39189815 - 39189940
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||| |||||||||||||||||||||||||| |||||| || |||||||| |||||||||| |  |||||||||||||| ||  ||||||||||||||    
T  39189815 caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccatcaaattc-aatttattaaacaat 39189912  T
Q  162 cctttgaaatttgaatgattttgaatac 189  Q
    |||| |||||||||||||| ||||||||    
T  39189913 ccttcgaaatttgaatgatgttgaatac 39189940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 18305977 - 18306090
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||          ||||||||||||||| || ||    
T  18305977 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatctttcga 18306066  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  18306067 aatttgaatgattttgaataccac 18306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 13478269 - 13478376
Alignment:
Q  82 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgatt 181  Q
    ||||||| ||||||||| ||||||||||||||  ||| ||||||| |||||||||| | |||||| |||||||||||||||||| ||||||| || ||||    
T  13478269 ttttcataaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatccaacgaaatctaatttattaaacaatccttcgaaatttaaaagatt 13478368  T
Q  182 ttgaatac 189  Q
    ||||||||    
T  13478369 ttgaatac 13478376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 7466525 - 7466412
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||| |||  |    
T  7466525 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaattcttcaa 7466436  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  7466435 aatttgaatgattttgaataccac 7466412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 32497715 - 32497602
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||||||| || || ||||||| ||||| ||||||||||||||||||          ||||||||||||||| || ||    
T  32497715 aagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcattcga 32497626  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  32497625 aatttgaatgattttgaataccac 32497602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 191
Target Start/End: Original strand, 8410416 - 8410526
Alignment:
Q  83 tttcatgaaagactttttcatgctaaaatttcactagaaaa--tcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgat 180  Q
    |||| ||||||||||| |||| |||||||||||||| ||||  ||||||||||||||||||| ||  ||||| ||||||||||||  |||||| ||||||    
T  8410416 tttcgtgaaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgat 8410515  T
Q  181 tttgaatacca 191  Q
    |||||||||||    
T  8410516 tttgaatacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 16362337 - 16362273
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  16362337 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 16362273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 37857309 - 37857196
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || | ||||| ||||          ||||||||||||||||||  ||||||||||||||||||| |    
T  37857309 aagaaatctcatcttttcatgaaagattttttcttgttcaaattacact----------acaaaatccatcaaaatccaatttattaaacaatcctttaa 37857220  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||| ||||||||||||    
T  37857219 aatttgaatgaatttgaataccac 37857196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 42305801 - 42305914
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||| ||||||||| || ||||||| |||||          |||||||||| ||||||  ||| |||||||||||||| ||    
T  42305801 aagaaatctcattttttcatgaatgactttttcttgttaaaattacacta----------caaaatccattaaaatccaattgattaaacaatccttcga 42305890  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||| ||||||||||||||    
T  42305891 aatttgaattattttgaataccac 42305914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 271
Target Start/End: Complemental strand, 31623825 - 31623693
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaaga 238  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| |||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaaga 31623726  T
Q  239 cnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |       |||||||||||| ||||||||||||    
T  31623725 cttttttaaaatgacaaagagtcttgattgaat 31623693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 4031334 - 4031387
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 4031387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 126
Target Start/End: Original strand, 9770439 - 9770503
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||||||||||||||| |||||| | ||||| ||| |||||||||| ||||||||||    
T  9770439 caatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 31623875 - 31623818
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    ||||||||| || ||||||||||| |||||||| || ||||||| ||||| |||||||    
T  31623875 aagaaatcttatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcc 31623818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 126
Target Start/End: Original strand, 4031297 - 4031341
Alignment:
Q  82 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||||||||||| || ||||||| ||||| |||||||    
T  4031297 ttttcatgaaagactttttcttgttaaaattacactacaaaatcc 4031341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 9770505 - 9770545
Alignment:
Q  148 atttattaaacaatcctttgaaatttgaatgattttgaata 188  Q
    |||||||||| ||| ||||||||||||||| ||||||||||    
T  9770505 atttattaaataattctttgaaatttgaattattttgaata 9770545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 147; Significance: 1e-77; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 973416 - 973183
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  973416 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatcca 973317  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||        ||||||||||||||| | |||||||||||||||    
T  973316 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaaattttttttaagtgattaagagtcttgattgaataccacaag 973217  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  973216 actttttttaaatgacaaagaatcttgattgaat 973183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 18914710 - 18914943
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18914710 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 18914809  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  18914810 tcaaaatctgatttattaaacaaacctttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 18914909  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       ||| |||||||||| ||||||||||    
T  18914910 actttttttaaaggacaaagaattttgattgaat 18914943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 34695505 - 34695272
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34695505 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 34695406  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||       ||||||||||||||| | ||||||||||||||     
T  34695405 tcaaaatctgatttattaaacaatccttcgaaatttgaatggttttgaataccactggactttttttaagtgattaagagtcttgattgaataccacaaa 34695306  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       ||||||||| |||||||||||||||    
T  34695305 actttttttaaatgacaaggaatcttgattgaat 34695272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 40996624 - 40996857
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  40996624 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatcca 40996723  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||| ||||||||||| | |||||||||||||||    
T  40996724 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagcgattaagagtcttgattgaataccacaag 40996823  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  40996824 actttttttaaatgacaaagaatcttgattgaat 40996857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 63 - 271
Target Start/End: Original strand, 43581090 - 43581298
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581090 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 43581189  T
Q  163 ctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatct 262  Q
    ||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||| |||||||       ||||||||||||||||    
T  43581190 cttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatacaacaagactttttttaaatgacaaagaatct 43581289  T
Q  263 tgattgaat 271  Q
    |||||||||    
T  43581290 tgattgaat 43581298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 44343395 - 44343604
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44343395 caatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44343494  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| ||||||||||||||||| ||||||||| |||       ||||||||||||||| | |||||||| ||||||||       |||||||||||||||    
T  44343495 ccttcgaaatttgaatgattttaaataccactaaactttttttaagtgattaagagtcttgattgaatatcacaagactttttttaaatgacaaagaatc 44343594  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  44343595 ttgattgaat 44343604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 30441028 - 30440795
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  30441028 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatcca 30440929  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  30440928 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 30440829  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |        |||||||||||||||||||||||||    
T  30440828 attttttttaaatgacaaagaatcttgattgaat 30440795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 47879400 - 47879167
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47879400 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatcca 47879301  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  ||       ||||||||||||||| | ||||||||||||| |    
T  47879300 tcaaaatctgatttattaaacaatccttttaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47879201  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  47879200 actttttttaaatgacaaagaatcttgattgaat 47879167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 47914498 - 47914265
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47914498 tagtaaaatcttaaaagaaaaaaacaatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 47914399  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||  ||       ||||||||||||||| | ||||||||||||| |    
T  47914398 tcaaaatcttatttattaaacaatccttcgaaatttgaatgattttgaatatcactagactttttttaagtgattaagagtcttgattgaataccacatg 47914299  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  47914298 actttttttaaatgacaaagaatcttgattgaat 47914265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 62 - 239
Target Start/End: Original strand, 7718361 - 7718538
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7718361 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7718460  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagac 239  Q
    |||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||||    
T  7718461 ccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagac 7718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 7719259 - 7719468
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7719259 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7719358  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    | || |||||||||||||||||||||||||||  |        ||||||||||||||| | |||||||||||||||||       |||||||||| |||     
T  7719359 cattcgaaatttgaatgattttgaataccactagattttttttaagtgattaagagtcttgattgaataccacaagactttttttaaatgacaaataata 7719458  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  7719459 ttgattgaat 7719468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 12893616 - 12893407
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12893616 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
     ||| ||||||||||||||||||||||||| |  ||       ||||||||||||||| | ||| |||||||||||||       |||||||||||||||    
T  12893516 tcttcgaaatttgaatgattttgaataccattagactttttttaagtgattaagagtcttgattaaataccacaagactttttttaaatgacaaagaatc 12893417  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  12893416 ttgattgaat 12893407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 38 - 271
Target Start/End: Complemental strand, 34009245 - 34009011
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||| ||||||||||||| |||||||||||| | |||||||| ||||||||||||    
T  34009245 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatcca 34009146  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccact-gaacnnnnnnnaagtgattaagagtccttattgaataccacaa 236  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       ||||||||||||||  | ||||||||||||||    
T  34009145 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactaggactttttttaagtgattaagagtgttgattgaataccacaa 34009046  T
Q  237 gacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |||       |||||||||| ||||||||||||||    
T  34009045 gactttttttaaatgacaaataatcttgattgaat 34009011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 20275238 - 20275471
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  20275238 tagtaaaatcttaaaagaaaaaaacaatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatcca 20275337  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||    ||       ||||||||||||||| | ||||||||||| |||    
T  20275338 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccataagactttttttaagtgattaagagtcttgattgaataccataag 20275437  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       ||||||||| |||||||||||||||    
T  20275438 actttttttaaatgacaaggaatcttgattgaat 20275471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 239
Target Start/End: Original strand, 39219352 - 39219552
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39219352 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 39219451  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||| | |  |||||||||||||||||||||||| |  ||       ||||||||||||||| | |||||||| ||||||    
T  39219452 tcaaaatctgatttattaaacaat-catcaaaatttgaatgattttgaataccaatagactttttttaagtgattaagagtcttgattgaataacacaag 39219550  T
Q  238 ac 239  Q
    ||    
T  39219551 ac 39219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 62 - 192
Target Start/End: Original strand, 32142916 - 32143046
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32142916 caatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 32143015  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    ||||  |||||||||||||||||||||||||    
T  32143016 ccttcaaaatttgaatgattttgaataccac 32143046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 7113660 - 7113528
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  7113660 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatctatcaaaatctgatttattaaacaat 7113561  T
Q  162 cctttgaaatttgaatgattttgaataccactg 194  Q
    |||  ||||||||||| ||||||||||||||||    
T  7113560 cctgcgaaatttgaattattttgaataccactg 7113528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 10068668 - 10068538
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  10068668 caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaat 10068569  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    ||||  |||||||||||||||||||||||||    
T  10068568 ccttcaaaatttgaatgattttgaataccac 10068538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 92 - 194
Target Start/End: Complemental strand, 43679592 - 43679490
Alignment:
Q  92 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  192 ctg 194  Q
    |||    
T  43679492 ctg 43679490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 23101492 - 23101369
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  23101492 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 23101393  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  23101392 aatttgaatgattttgaataccac 23101369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 28342541 - 28342418
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  28342541 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28342442  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  28342441 aatttgaatgattttgaataccac 28342418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 3023120 - 3022997
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  3023120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 3023021  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  3023020 aatttgaatgattttgaataccac 3022997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 28034811 - 28034934
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||  || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28034811 aagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 28034910  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||| ||||||||||||||    
T  28034911 aatttgaataattttgaataccac 28034934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 188
Target Start/End: Original strand, 29614770 - 29614889
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  29614770 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29614869  T
Q  169 aatttgaatgattttgaata 188  Q
    ||||||||||||||||||||    
T  29614870 aatttgaatgattttgaata 29614889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 39784293 - 39784170
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  39784293 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 39784194  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||| ||||||||||||||||||    
T  39784193 aatttaaatgattttgaataccac 39784170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 18838583 - 18838460
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| || ||    
T  18838583 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatctttcga 18838484  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  18838483 aatttgaatgattttgaataccac 18838460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 192
Target Start/End: Complemental strand, 12740573 - 12740444
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||| |||| |||||||||||| || || ||||||| ||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  12740573 caatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaacaat 12740475  T
Q  162 cctttgaaatttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||||||||||||    
T  12740474 cctttgaaatttgaatgattttgaataccac 12740444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 12963874 - 12963772
Alignment:
Q  90 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatac 189  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| ||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggatac 12963775  T
Q  190 cac 192  Q
    |||    
T  12963774 cac 12963772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 62 - 191
Target Start/End: Original strand, 43187356 - 43187485
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||| || ||||||||||| |||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||    
T  43187356 caatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaat 43187455  T
Q  162 cctttgaaatttgaatgattttgaatacca 191  Q
     |||  ||||||||||||||||||||||||    
T  43187456 gcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 72 - 191
Target Start/End: Complemental strand, 33382828 - 33382709
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| ||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  33382828 aaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 33382729  T
Q  172 ttgaatgattttgaatacca 191  Q
    || |||||||||||||||||    
T  33382728 ttaaatgattttgaatacca 33382709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 7993336 - 7993214
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||| |||||||||||||   |||||||||||||||||| ||    
T  7993336 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatccttcga 7993237  T
Q  169 aatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||    
T  7993236 aatttgaatgattttgaatacca 7993214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 271
Target Start/End: Original strand, 9882243 - 9882444
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| || ||    
T  9882243 aagaaatctcatttttt-atgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 9882341  T
Q  169 aatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattg 268  Q
    ||||||||||||||||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| |||||||||    
T  9882342 aatttgaatgattttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtcttgattg 9882441  T
Q  269 aat 271  Q
    |||    
T  9882442 aat 9882444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 8675527 - 8675404
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||| ||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  8675527 aagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 8675428  T
Q  169 aatttgaatgattttgaataccac 192  Q
    | ||| ||||||||||||||||||    
T  8675427 agtttaaatgattttgaataccac 8675404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 81 - 189
Target Start/End: Complemental strand, 727692 - 727594
Alignment:
Q  81 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgat 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||    
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa----------aatctgatttattaaacaatcctttgaaatttgaatgat 727603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 9180071 - 9179872
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||          ||||||||||||||    
T  9180071 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca----------atttattaaacaat 9179982  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    |||| | ||||| | |||||||| |||||||   ||       ||||||| ||||||| | ||||||||| |||| ||       |||||||||||||||    
T  9179981 ccttcggaatttaagtgattttgtataccacaagactttttttaagtgatgaagagtcttgattgaatacgacaaaactttttttaaatgacaaagaatc 9179882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 69 - 188
Target Start/End: Complemental strand, 19810983 - 19810874
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||          ||||||||||||||| |||||    
T  19810983 aagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca----------atttattaaacaatcatttga 19810894  T
Q  169 aatttgaatgattttgaata 188  Q
    ||||||||||||||||||||    
T  19810893 aatttgaatgattttgaata 19810874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 93 - 192
Target Start/End: Complemental strand, 25805862 - 25805763
Alignment:
Q  93 gactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||   |||||||||||||||||  ||||||||||||||||||||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 37972873 - 37972981
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||| |||||| |||||||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||||  |||||||||| ||||||| ||    
T  37972873 aagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaaataatccttcga 37972972  T
Q  169 aatttgaat 177  Q
    |||||||||    
T  37972973 aatttgaat 37972981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 3797066 - 3797265
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||    
T  3797066 caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatc---------ccatcaaaatctaatttattaaacaat 3797155  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||||  |||||| |||||| |||||||||||   ||       ||||||| || |||| | |||||||||| ||||||       |||||||||||| ||    
T  3797156 ccttcaaaattttaatgatcttgaataccacaagactttttttaagtgatgaaaagtcttgattgaatacctcaagacttttttaaaatgacaaagagtc 3797255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 31639015 - 31638910
Alignment:
Q  130 aaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaat 229  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | || ||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgatagaat 31638916  T
Q  230 accaca 235  Q
    ||||||    
T  31638915 accaca 31638910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 69 - 165
Target Start/End: Complemental strand, 41827498 - 41827402
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctt 165  Q
    |||||||||||| |||||||||||||| ||||| || ||||||| ||||| | ||||||||||||||||||||||||  ||||||||||||||||||    
T  41827498 aagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaaacaatcctt 41827402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 44256775 - 44256895
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| |||| |||||| |||||||| || ||||||| ||||  ||||||| ||||||| |||| |||||  ||||||||||||||| || |||||    
T  44256775 aaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatcattcgaaat 44256874  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  44256875 ttgaatgattttgaataccac 44256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 63 - 192
Target Start/End: Complemental strand, 19251729 - 19251610
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    ||||| ||||||| ||| ||||||||||||||||||||  |||||||||||||| |||||||||  |||||||||          |||||||||||||||    
T  19251729 aatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatcca----------atttattaaacaatc 19251640  T
Q  163 ctttgaaatttgaatgattttgaataccac 192  Q
    ||| ||||||||||||||||||||||||||    
T  19251639 cttcgaaatttgaatgattttgaataccac 19251610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 40 - 192
Target Start/End: Original strand, 1470213 - 1470362
Alignment:
Q  40 gtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatc 139  Q
    |||||||||||||||       |||| ||| ||||||||  |||||||  ||||| |||||||||||||||||| |  |||||||||||||||| | |||    
T  1470213 gtaaaatcttaaaagaaaaaaacaatgctaggaaatctc--gttttcaaaaaagattttttcatgctaaaattttatcagaaaatcccacaaaa-ctatc 1470309  T
Q  140 aaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||| ||| |||||||||| |||| ||||||||| |||||||||||||||    
T  1470310 aaaatctaattcattaaacaatgctttaaaatttgaacgattttgaataccac 1470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 10676463 - 10676546
Alignment:
Q  106 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatac 189  Q
    ||||||||||| ||||||| ||| |||||||||| |||||  |||||||||||||||||| |||||||||||||||||||||||    
T  10676463 taaaatttcacaagaaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatac 10676546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 97 - 192
Target Start/End: Complemental strand, 32883948 - 32883853
Alignment:
Q  97 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||| || ||||||| ||||| |||||||||| |||||||||||||||  ||||| ||||||||| || ||||||||||||||||||||||||||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccac 32883853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 46405494 - 46405560
Alignment:
Q  126 ccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  46405494 ccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatgattttgaataccac 46405560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 44121919 - 44122029
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| ||||||| |||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||| |||||    
T  44121919 aaatctcatcttttcattaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcgaaat 44122008  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  44122009 ttgaatgattttgaataccac 44122029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 509840 - 509727
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||  |||||          |||||||||||||||||  ||||||||||||||| || ||    
T  509840 aagaaatctcatcttttcatgaaagactttttcttgttaaaatcccacta----------caaaatccatcaaaatccaatttattaaacaatcgttcga 509751  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  509750 aatttgaatgattttgaataccac 509727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 37328062 - 37327998
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  37328062 acaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgattttgaataccac 37327998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 40460723 - 40460836
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| |||||| || ||||||| |||||          |||||||||||||||||  ||||||||||||||| || ||    
T  40460723 aagaaatctcatattttcatgaaagattttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcattcga 40460812  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  40460813 aatttgaatgattttgaataccac 40460836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 10617102 - 10617024
Alignment:
Q  79 atgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 157  Q
    ||||||| ||||||||||| ||  | ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  10617102 atgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatccatcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 191
Target Start/End: Complemental strand, 29585698 - 29585586
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||| |||| |||| ||||||||||||||| || ||||||| ||||          ||||||||||||||||||  | ||||||||||||||||  |    
T  29585698 aagaaatttcatctttttatgaaagactttttcttgttaaaattacact----------acaaaatccatcaaaatccaaattattaaacaatccttcaa 29585609  T
Q  169 aatttgaatgattttgaatacca 191  Q
    |||||||||||||||||||||||    
T  29585608 aatttgaatgattttgaatacca 29585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 139 - 271
Target Start/End: Original strand, 17001099 - 17001231
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaaga 238  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||   |        ||||||| || |||| |||||||||||| |||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccacgatattttttttaagtgatgaaaagtctttattgaatacctcaaga 17001198  T
Q  239 cnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    |       |||||||||||| ||||||||||||    
T  17001199 ctttttaaaaatgacaaagagtcttgattgaat 17001231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 271
Target Start/End: Original strand, 44623295 - 44623484
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    |||| |||| |||| |||| |||||||||||| |||||||||||||||||||| ||||||||| ||          |||||||||||| || || |||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaattca----------atttattaaacagtctttagaaat 44623384  T
Q  172 ttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
     |||||||||||||||| |||   ||       ||||||| ||||||| | ||| |||||||||||||       |||||||||||| ||||||||||||    
T  44623385 atgaatgattttgaatatcacgagacctttttaaagtgatgaagagtcttgattaaataccacaagactttttttaaatgacaaagagtcttgattgaat 44623484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 47066828 - 47066775
Alignment:
Q  139 caaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 47066775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 192
Target Start/End: Original strand, 33892269 - 33892379
Alignment:
Q  72 aaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaat 171  Q
    ||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||| ||| ||||||  ||||||| ||||||| || |||||    
T  33892269 aaatctcatcttttaatgaaagactttttcttgttaaaattacacta----------caaaattcataaaaatccaatttatttaacaatcattcgaaat 33892358  T
Q  172 ttgaatgattttgaataccac 192  Q
    |||||||||||||||||||||    
T  33892359 ttgaatgattttgaataccac 33892379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 188
Target Start/End: Complemental strand, 39028232 - 39028172
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaata 188  Q
    ||||||||||||||||||  ||||||||||||||| || | |||||||| |||||||||||    
T  39028232 acaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaacgattttgaata 39028172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  133 atccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    |||||||||||||  ||| ||||||||||| || ||||||||||||||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 69 - 126
Target Start/End: Original strand, 17001049 - 17001106
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||| |||||||||||||||||||| || || |||| ||||| |||||||    
T  17001049 aagaaatctcatattttcatgaaagactttttcttgttataattacactacaaaatcc 17001106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 126
Target Start/End: Complemental strand, 47066878 - 47066821
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcc 126  Q
    |||||||||||| ||||||||||| | |||||| || ||||||| ||||| |||||||    
T  47066878 aagaaatctcatcttttcatgaaatattttttcttgttaaaattacactacaaaatcc 47066821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 15009 - 15242
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15009 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15108  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||| |||||    
T  15109 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15208  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  15209 actttttttaaatgacaaagaatcttgattgaat 15242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 143; Significance: 3e-75; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 38 - 271
Target Start/End: Original strand, 15652 - 15885
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15652 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 15751  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||| |||||    
T  15752 tcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaatactacaag 15851  T
Q  238 acnnnnnnnaaatgacaaagaatcttgattgaat 271  Q
    ||       |||||||||||||||||||||||||    
T  15852 actttttttaaatgacaaagaatcttgattgaat 15885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 38 - 239
Target Start/End: Original strand, 38581 - 38781
Alignment:
Q  38 tagtaaaatcttaaaagnnnnnnncaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38581 tagtaaaatcttaaaagaaaaaaacaatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 38680  T
Q  138 tcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaag 237  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||  ||       ||||||||||||||| | |||||||||||||||    
T  38681 tcaaaatctga-ttattaaacaatccttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaag 38779  T
Q  238 ac 239  Q
    ||    
T  38780 ac 38781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 62 - 271
Target Start/End: Original strand, 38895 - 39104
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38895 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 38994  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatc 261  Q
    ||||  ||||||||||||||||||||| ||||  ||       ||||||||||||||| |||||||||||||||||||       |||||| ||||||||    
T  38995 ccttccaaatttgaatgattttgaatatcactagacttcttttaagtgattaagagtctttattgaataccacaagactttttttaaatgataaagaatc 39094  T
Q  262 ttgattgaat 271  Q
    ||||||||||    
T  39095 ttgattgaat 39104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 65 - 271
Target Start/End: Complemental strand, 100415 - 100209
Alignment:
Q  65 tcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcct 164  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  100415 tcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcct 100316  T
Q  165 ttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatcttg 264  Q
    |||||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||| |||||||||||       ||||||||||||||||||    
T  100315 ttgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgagtaccacaagactttttttaaatgacaaagaatcttg 100216  T
Q  265 attgaat 271  Q
    |||||||    
T  100215 attgaat 100209  T

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Target: scaffold0004 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 62 - 271
Target Start/End: Complemental strand, 102302 - 102091
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 161  Q
    ||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  102302 caatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 102203  T
Q  162 cctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaaga--cnnnnnnnaaatgacaaagaa 259  Q
    | || |||||||||||||||||||||||||||  ||       ||||||||||||||| | ||||||||||||||||  |       |||||||||||||    
T  102202 ctttcgaaatttgaatgattttgaataccactagactttttttaagtgattaagagtcttgattgaataccacaagactctttttttaaatgacaaagaa 102103  T
Q  260 tcttgattgaat 271  Q
    ||||||||||||    
T  102102 tcttgattgaat 102091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 63 - 271
Target Start/End: Original strand, 540 - 748
Alignment:
Q  63 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||||||||||||||||||||||| | |||||||||||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  540 aatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatc 639  T
Q  163 ctttgaaatttgaatgattttgaataccactgaacnnnnnnnaagtgattaagagtccttattgaataccacaagacnnnnnnnaaatgacaaagaatct 262  Q
    |||  |||||||||||||||||||||||||| ||        ||||||||||||||  | |||||||||||||| ||       ||||||||||||||||    
T  640 cttccaaatttgaatgattttgaataccactaaaaaaaatttaagtgattaagagttttgattgaataccacaatactttttttaaatgacaaagaatct 739  T
Q  263 tgattgaat 271  Q
    |||||||||    
T  740 tgattgaat 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 10760 - 10637
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||||   |||||||||||||||||||||    
T  10760 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcctttga 10661  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  10660 aatttgaatgattttgaataccac 10637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 192
Target Start/End: Original strand, 39624 - 39747
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||| ||||||| ||    
T  39624 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatccttcga 39723  T
Q  169 aatttgaatgattttgaataccac 192  Q
    | ||||||||||||||||||||||    
T  39724 agtttgaatgattttgaataccac 39747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 190
Target Start/End: Original strand, 36914 - 37035
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    ||||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||| ||| ||    
T  36914 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatgcttcga 37013  T
Q  169 aatttgaatgattttgaatacc 190  Q
    ||||| ||||||||||||||||    
T  37014 aattttaatgattttgaatacc 37035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 69 - 197
Target Start/End: Original strand, 58083 - 58211
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| ||||||||||||| ||| || || |||||||  |||| ||||||||||||||||||||||||||  ||||||||||||||| || ||    
T  58083 aagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 58182  T
Q  169 aatttgaatgattttgaataccactgaac 197  Q
    |||||||||||||||||||||||| ||||    
T  58183 aatttgaatgattttgaataccacagaac 58211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 1063 - 941
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||| |||||||||||||||  | ||||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||| ||| ||    
T  1063 aagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatct-atttattaaataattcttcga 965  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  964 aatttgaatgattttgaataccac 941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 192
Target Start/End: Complemental strand, 14072 - 13959
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttga 168  Q
    |||||||||||| |||||||||||||||||||| |  ||||||  ||||          ||||||||||||||||||  ||||||||||||||| |||||    
T  14072 aagaaatctcatcttttcatgaaagactttttcttattaaaatcccact----------acaaaatccatcaaaatccaatttattaaacaatcttttga 13983  T
Q  169 aatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||||||||    
T  13982 aatttgaatgattttgaataccac 13959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 192
Target Start/End: Original strand, 21304 - 21368
Alignment:
Q  128 acaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||||||    
T  21304 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccac 21368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Original strand, 21255 - 21287
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttc 101  Q
    |||||||||||| ||||||||||||||||||||    
T  21255 aagaaatctcatcttttcatgaaagactttttc 21287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 101
Target Start/End: Complemental strand, 28542 - 28510
Alignment:
Q  69 aagaaatctcatgttttcatgaaagactttttc 101  Q
    |||||||||||| ||||||||||||||||||||    
T  28542 aagaaatctcatcttttcatgaaagactttttc 28510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 14967 - 14892
Alignment:
Q  62 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 137  Q
    ||||| ||||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  14967 caatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 3712 - 3792
Alignment:
Q  82 ttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 162  Q
    |||| ||||||||| ||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  3712 tttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatc 3792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 192
Target Start/End: Complemental strand, 4337 - 4277
Alignment:
Q  132 aatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaataccac 192  Q
    ||||||||||||||  ||||||||||||||||||  |||||||||||||||||||||||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccac 4277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 189
Target Start/End: Complemental strand, 199998 - 199905
Alignment:
Q  96 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcctttgaaatttgaatgattttgaatac 189  Q
    ||||| || ||||| |||||||| |||||| ||||||||| ||||||||   |||||||||||| || ||  |||||||||||||||| |||||    
T  199998 ttttttatactaaagtttcactaaaaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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