View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4259_low_24 (Length: 250)
Name: NF4259_low_24
Description: NF4259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4259_low_24 |
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Alignment Details
Target: chr2 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 1610257 - 1610499
Alignment:
| Q |
1 |
tcaagaatcctggttcaagagctgatacaactaatgaaacttgttgcttagttttgagagtctcgatcagcttctgcacaacacgagtgttgtgggaagg |
100 |
Q |
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|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
1610257 |
tcaagaatcctggttcaagagctgatacgactaatgaaacttgttgcttagttttgagagtctcgatcagcttctgcacaacacgagtgctgtgggaagg |
1610356 |
T |
|
| Q |
101 |
agagaacaatgaggtcaagttcagcattagataataagtacattatttcatattaattataaaatagttgcatgactacccgtgagtatttaacgagatt |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1610357 |
agagaacaatgaggtcaagttcaacattagataataagtacattatttcatattagttataaaatagttgcatgactacccgtgagtatttaacgagatt |
1610456 |
T |
|
| Q |
201 |
ctgacaagctgccccggctcctggataaccatcagtataatct |
243 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||| |||| |
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| T |
1610457 |
ctgacaagctgccccggctcctggataaccatcagtatgatct |
1610499 |
T |
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