View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4259_low_5 (Length: 489)

Name: NF4259_low_5
Description: NF4259
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4259_low_5
NF4259_low_5
[»] chr8 (75 HSPs)
chr8 (101-485)||(2540647-2541030)
chr8 (123-489)||(2531307-2531685)
chr8 (1-70)||(10586023-10586092)
chr8 (1-70)||(185894-185963)
chr8 (1-70)||(17656631-17656700)
chr8 (1-70)||(34343262-34343331)
chr8 (36-117)||(34343415-34343496)
chr8 (41-117)||(35448579-35448655)
chr8 (36-117)||(17656782-17656863)
chr8 (1-70)||(24473207-24473275)
chr8 (10-70)||(1773251-1773311)
chr8 (36-116)||(23567607-23567687)
chr8 (36-114)||(1672895-1672973)
chr8 (8-70)||(5106697-5106759)
chr8 (1-55)||(15808898-15808952)
chr8 (175-335)||(1829582-1829743)
chr8 (175-335)||(1864027-1864188)
chr8 (36-117)||(15809804-15809885)
chr8 (36-92)||(1773114-1773170)
chr8 (1-59)||(17792865-17792923)
chr8 (36-114)||(27506708-27506786)
chr8 (13-59)||(32644220-32644266)
chr8 (36-121)||(10585855-10585940)
chr8 (36-92)||(17792716-17792772)
chr8 (22-70)||(27506868-27506916)
chr8 (36-107)||(28979291-28979362)
chr8 (6-53)||(28979438-28979485)
chr8 (1-43)||(1672920-1672962)
chr8 (60-122)||(10586049-10586111)
chr8 (1-43)||(15809829-15809871)
chr8 (1-70)||(18161301-18161371)
chr8 (5-59)||(18757203-18757257)
chr8 (36-121)||(21120290-21120373)
chr8 (1-43)||(35448599-35448641)
chr8 (36-117)||(186045-186126)
chr8 (60-117)||(15808884-15808941)
chr8 (1-46)||(23567499-23567544)
chr8 (47-120)||(32644043-32644115)
chr8 (24-64)||(2541157-2541197)
chr8 (53-117)||(23347702-23347766)
chr8 (1-44)||(186069-186112)
chr8 (67-122)||(17792887-17792942)
chr8 (6-45)||(23504512-23504551)
chr8 (16-59)||(23504666-23504709)
chr8 (1-44)||(28979295-28979338)
chr8 (14-57)||(35116768-35116811)
chr8 (36-122)||(23504488-23504573)
chr8 (1-43)||(23567632-23567674)
chr8 (1-43)||(27506719-27506761)
chr8 (1-43)||(34343440-34343482)
chr8 (1-59)||(35448247-35448305)
chr8 (36-90)||(41642173-41642227)
chr8 (36-117)||(45409404-45409486)
chr8 (41-98)||(204950-205007)
chr8 (41-98)||(319787-319844)
chr8 (60-117)||(17656617-17656674)
chr8 (60-117)||(23567485-23567542)
chr8 (7-43)||(32644065-32644101)
chr8 (66-122)||(35448228-35448284)
chr8 (5-44)||(21120209-21120248)
chr8 (5-39)||(204949-204983)
chr8 (5-39)||(319786-319820)
chr8 (23-69)||(6783468-6783514)
chr8 (1-59)||(8439161-8439219)
chr8 (1-43)||(23347710-23347752)
chr8 (10-43)||(17792714-17792747)
chr8 (60-117)||(34343248-34343305)
chr8 (10-63)||(45409727-45409780)
chr8 (8-44)||(1773110-1773146)
chr8 (40-84)||(2541031-2541075)
chr8 (60-92)||(5106723-5106755)
chr8 (11-43)||(17656807-17656839)
chr8 (36-104)||(18161453-18161521)
chr8 (35-71)||(34647532-34647568)
chr8 (35-71)||(40022749-40022785)
[»] chr3 (53 HSPs)
chr3 (1-117)||(50416493-50416609)
chr3 (36-117)||(19012526-19012607)
chr3 (1-70)||(36185867-36185936)
chr3 (36-121)||(36185721-36185806)
chr3 (36-117)||(8036799-8036880)
chr3 (36-113)||(21175232-21175309)
chr3 (1-70)||(27446175-27446244)
chr3 (6-121)||(47225778-47225897)
chr3 (1-69)||(20127136-20127204)
chr3 (1-117)||(50416479-50416595)
chr3 (3-57)||(8036964-8037018)
chr3 (36-121)||(12974007-12974092)
chr3 (1-70)||(47924328-47924397)
chr3 (40-121)||(49053220-49053301)
chr3 (1-69)||(30794862-30794930)
chr3 (36-92)||(38345444-38345500)
chr3 (12-70)||(14743567-14743625)
chr3 (36-121)||(47924157-47924245)
chr3 (1-70)||(12974153-12974221)
chr3 (1-70)||(16653510-16653578)
chr3 (1-70)||(19012405-19012473)
chr3 (1-70)||(49053388-49053457)
chr3 (1-44)||(8036813-8036856)
chr3 (36-115)||(27437833-27437912)
chr3 (1-43)||(47729245-47729287)
chr3 (60-117)||(20127161-20127218)
chr3 (60-117)||(36185893-36185950)
chr3 (60-117)||(49053414-49053471)
chr3 (1-43)||(19012551-19012593)
chr3 (1-43)||(36185739-36185781)
chr3 (1-43)||(47225837-47225879)
chr3 (1-43)||(49053238-49053280)
chr3 (10-52)||(49450547-49450589)
chr3 (60-117)||(16653496-16653552)
chr3 (60-117)||(19012391-19012447)
chr3 (64-117)||(38345279-38345332)
chr3 (36-117)||(47729220-47729301)
chr3 (3-43)||(21175257-21175297)
chr3 (4-36)||(35222285-35222317)
chr3 (40-84)||(51681146-51681190)
chr3 (1-43)||(12974025-12974067)
chr3 (1-43)||(27437845-27437887)
chr3 (9-43)||(47924186-47924220)
chr3 (60-117)||(8036977-8037034)
chr3 (72-117)||(19384380-19384425)
chr3 (10-43)||(20127023-20127056)
chr3 (5-70)||(38345297-38345362)
chr3 (66-122)||(12974185-12974240)
chr3 (35-71)||(23755921-23755957)
chr3 (35-71)||(34562762-34562798)
chr3 (40-84)||(35221580-35221624)
chr3 (66-114)||(47924360-47924408)
chr3 (77-117)||(49450493-49450533)
[»] chr4 (107 HSPs)
chr4 (1-122)||(25715637-25715758)
chr4 (1-70)||(31763070-31763139)
chr4 (1-70)||(37059877-37059946)
chr4 (36-121)||(53865207-53865292)
chr4 (5-92)||(6806492-6806579)
chr4 (36-123)||(31762922-31763009)
chr4 (36-122)||(36309581-36309667)
chr4 (1-70)||(1492685-1492754)
chr4 (40-117)||(6841820-6841897)
chr4 (36-117)||(8165761-8165842)
chr4 (1-70)||(8166040-8166109)
chr4 (1-70)||(12722900-12722969)
chr4 (1-70)||(21995683-21995752)
chr4 (1-70)||(43374460-43374529)
chr4 (1-70)||(54895417-54895486)
chr4 (36-116)||(38010674-38010754)
chr4 (36-122)||(2124338-2124424)
chr4 (36-117)||(12722736-12722818)
chr4 (1-83)||(33871227-33871309)
chr4 (1-59)||(36309429-36309487)
chr4 (1-70)||(2124507-2124576)
chr4 (1-70)||(8157251-8157320)
chr4 (40-117)||(33883293-33883370)
chr4 (1-70)||(33883445-33883514)
chr4 (1-70)||(36924254-36924323)
chr4 (1-57)||(6768416-6768472)
chr4 (1-69)||(10374056-10374124)
chr4 (13-69)||(27872962-27873018)
chr4 (1-59)||(9813118-9813176)
chr4 (1-70)||(16474982-16475051)
chr4 (1-70)||(17109881-17109949)
chr4 (36-121)||(37059706-37059791)
chr4 (36-120)||(38563801-38563885)
chr4 (1-69)||(53865077-53865145)
chr4 (36-115)||(54895547-54895626)
chr4 (1-59)||(30779679-30779737)
chr4 (6-64)||(38563929-38563987)
chr4 (60-117)||(2124533-2124590)
chr4 (60-117)||(12722926-12722983)
chr4 (36-117)||(17109718-17109799)
chr4 (36-117)||(30779342-30779423)
chr4 (36-117)||(43375485-43375566)
chr4 (1-70)||(47567909-47567978)
chr4 (36-117)||(53526416-53526497)
chr4 (36-92)||(9967705-9967761)
chr4 (21-69)||(41025226-41025274)
chr4 (1-57)||(53526264-53526320)
chr4 (5-69)||(55660405-55660469)
chr4 (1-44)||(562788-562831)
chr4 (15-70)||(6841982-6842037)
chr4 (1-117)||(25715656-25715772)
chr4 (1-44)||(31762942-31762985)
chr4 (1-44)||(33883307-33883350)
chr4 (1-43)||(2124357-2124399)
chr4 (1-43)||(6841834-6841876)
chr4 (1-43)||(8165775-8165817)
chr4 (60-122)||(36924235-36924297)
chr4 (5-43)||(41025078-41025116)
chr4 (1-43)||(53865232-53865274)
chr4 (36-117)||(1492825-1492906)
chr4 (7-44)||(9967700-9967737)
chr4 (60-117)||(54895403-54895460)
chr4 (55-123)||(562768-562836)
chr4 (36-92)||(9812969-9813025)
chr4 (1-57)||(42788650-42788706)
chr4 (4-44)||(43375509-43375549)
chr4 (36-112)||(51076901-51076977)
chr4 (36-119)||(8157108-8157190)
chr4 (46-117)||(36924418-36924489)
chr4 (4-43)||(38010699-38010738)
chr4 (50-92)||(22007705-22007747)
chr4 (60-122)||(33871266-33871328)
chr4 (60-114)||(33883471-33883525)
chr4 (60-122)||(43374441-43374503)
chr4 (60-122)||(47567890-47567952)
chr4 (60-122)||(53865058-53865120)
chr4 (1-43)||(54895572-54895614)
chr4 (60-117)||(1492671-1492728)
chr4 (60-117)||(21995669-21995726)
chr4 (60-117)||(31763096-31763153)
chr4 (40-121)||(41025056-41025137)
chr4 (36-89)||(47568049-47568102)
chr4 (71-123)||(17109917-17109969)
chr4 (66-117)||(9813139-9813190)
chr4 (1-43)||(12722750-12722793)
chr4 (73-120)||(33819687-33819734)
chr4 (66-113)||(36309419-36309466)
chr4 (1-44)||(51076910-51076953)
chr4 (1-43)||(562935-562977)
chr4 (12-70)||(9967832-9967890)
chr4 (10-44)||(22007715-22007749)
chr4 (1-43)||(36309606-36309648)
chr4 (1-39)||(37059724-37059762)
chr4 (36-70)||(38010498-38010532)
chr4 (1-43)||(53526441-53526483)
chr4 (40-117)||(6768565-6768642)
chr4 (60-117)||(16475008-16475065)
chr4 (1-30)||(33819704-33819733)
chr4 (35-71)||(1728982-1729018)
chr4 (66-114)||(8157283-8157331)
chr4 (1-69)||(8242577-8242644)
chr4 (35-71)||(29826065-29826101)
chr4 (1-41)||(30779356-30779396)
chr4 (35-71)||(38010540-38010576)
chr4 (60-112)||(42788663-42788715)
chr4 (35-71)||(49137488-49137524)
chr4 (35-71)||(50644349-50644385)
[»] chr1 (87 HSPs)
chr1 (1-70)||(17893235-17893304)
chr1 (36-122)||(17893066-17893152)
chr1 (1-71)||(42134094-42134164)
chr1 (36-122)||(45849102-45849188)
chr1 (1-70)||(31763788-31763857)
chr1 (1-70)||(12070572-12070641)
chr1 (1-70)||(14229323-14229392)
chr1 (1-70)||(14389857-14389926)
chr1 (1-70)||(18928791-18928860)
chr1 (1-70)||(32595117-32595186)
chr1 (36-117)||(33157144-33157225)
chr1 (36-121)||(18928921-18929004)
chr1 (1-70)||(9041013-9041082)
chr1 (1-70)||(9628561-9628630)
chr1 (1-70)||(11354473-11354542)
chr1 (36-121)||(18952402-18952487)
chr1 (1-70)||(33157005-33157073)
chr1 (36-121)||(46590553-46590638)
chr1 (36-120)||(17811247-17811331)
chr1 (36-116)||(49992682-49992762)
chr1 (1-70)||(1395177-1395246)
chr1 (36-117)||(1395315-1395396)
chr1 (36-117)||(42133943-42134024)
chr1 (1-70)||(45849271-45849340)
chr1 (1-70)||(47693828-47693897)
chr1 (36-92)||(12796593-12796649)
chr1 (41-116)||(11354324-11354399)
chr1 (36-117)||(14229171-14229252)
chr1 (36-117)||(14390008-14390089)
chr1 (18-63)||(24368445-24368490)
chr1 (60-117)||(32595103-32595160)
chr1 (60-121)||(42134121-42134182)
chr1 (36-121)||(24368580-24368661)
chr1 (21-69)||(29945250-29945298)
chr1 (1-44)||(1395339-1395382)
chr1 (1-44)||(14229185-14229228)
chr1 (36-122)||(29945382-29945466)
chr1 (1-43)||(10974646-10974688)
chr1 (1-43)||(17811272-17811314)
chr1 (1-43)||(17893085-17893127)
chr1 (1-43)||(45849121-45849163)
chr1 (1-63)||(46590728-46590790)
chr1 (14-59)||(6708343-6708388)
chr1 (60-117)||(14229349-14229406)
chr1 (60-117)||(17893261-17893318)
chr1 (36-117)||(31763937-31764018)
chr1 (10-55)||(35754591-35754636)
chr1 (60-113)||(45849297-45849350)
chr1 (50-122)||(32595261-32595333)
chr1 (60-119)||(9628587-9628646)
chr1 (60-123)||(12070598-12070661)
chr1 (1-69)||(12796436-12796510)
chr1 (19-58)||(15588548-15588587)
chr1 (1-59)||(32143741-32143800)
chr1 (66-117)||(33156991-33157042)
chr1 (41-92)||(35754737-35754788)
chr1 (36-91)||(47693691-47693746)
chr1 (36-79)||(51904730-51904773)
chr1 (1-43)||(18928944-18928986)
chr1 (1-43)||(29945405-29945447)
chr1 (1-43)||(33157169-33157211)
chr1 (1-55)||(49992531-49992585)
chr1 (36-113)||(15588635-15588711)
chr1 (60-117)||(47693854-47693911)
chr1 (6-43)||(49992707-49992744)
chr1 (22-70)||(18952548-18952596)
chr1 (1-44)||(11354337-11354380)
chr1 (60-107)||(14389853-14389900)
chr1 (1-44)||(31763961-31764004)
chr1 (58-117)||(32143755-32143814)
chr1 (55-117)||(10974632-10974694)
chr1 (64-122)||(12796417-12796475)
chr1 (9-43)||(12796618-12796652)
chr1 (9-43)||(14390033-14390067)
chr1 (5-43)||(18952424-18952462)
chr1 (1-44)||(47693677-47693722)
chr1 (60-117)||(9041039-9041096)
chr1 (72-117)||(23174401-23174446)
chr1 (35-71)||(10497900-10497936)
chr1 (36-84)||(12070453-12070501)
chr1 (35-71)||(20506669-20506705)
chr1 (35-71)||(21256200-21256236)
chr1 (35-71)||(23277327-23277363)
chr1 (35-71)||(23921298-23921334)
chr1 (35-71)||(31084048-31084084)
chr1 (38-70)||(35197618-35197650)
chr1 (35-71)||(37642765-37642801)
[»] chr7 (48 HSPs)
chr7 (36-121)||(44426763-44426848)
chr7 (5-70)||(5728697-5728762)
chr7 (36-117)||(5728844-5728925)
chr7 (1-70)||(26945676-26945745)
chr7 (1-70)||(44426611-44426680)
chr7 (5-69)||(7843682-7843746)
chr7 (1-69)||(34227839-34227907)
chr7 (1-64)||(46004503-46004566)
chr7 (36-122)||(46004335-46004421)
chr7 (36-117)||(26945513-26945594)
chr7 (36-113)||(32604724-32604801)
chr7 (36-121)||(34227671-34227756)
chr7 (36-121)||(41065763-41065848)
chr7 (1-70)||(41065931-41066000)
chr7 (1-70)||(43742262-43742331)
chr7 (3-57)||(5728640-5728694)
chr7 (36-117)||(7843518-7843599)
chr7 (36-97)||(31365434-31365495)
chr7 (36-113)||(38837543-38837620)
chr7 (6-70)||(31192518-31192582)
chr7 (1-69)||(45478327-45478395)
chr7 (36-121)||(6620762-6620846)
chr7 (60-117)||(26945702-26945759)
chr7 (1-70)||(31365284-31365353)
chr7 (1-70)||(38837691-38837760)
chr7 (40-121)||(45478482-45478563)
chr7 (4-43)||(38837556-38837595)
chr7 (60-122)||(44426592-44426654)
chr7 (1-46)||(7845083-7845128)
chr7 (36-92)||(6846603-6846659)
chr7 (1-44)||(34227689-34227732)
chr7 (1-43)||(32604734-32604776)
chr7 (36-70)||(44140520-44140554)
chr7 (1-43)||(44426788-44426830)
chr7 (5-70)||(6620636-6620701)
chr7 (60-117)||(34227864-34227921)
chr7 (60-117)||(46004523-46004580)
chr7 (66-117)||(43742248-43742299)
chr7 (1-43)||(924510-924552)
chr7 (1-43)||(5728869-5728911)
chr7 (1-43)||(7843532-7843574)
chr7 (36-70)||(32091312-32091346)
chr7 (5-43)||(46004358-46004396)
chr7 (36-70)||(48830380-48830414)
chr7 (60-117)||(38837717-38837774)
chr7 (35-71)||(24360412-24360448)
chr7 (35-71)||(25779363-25779399)
chr7 (35-71)||(48830246-48830282)
[»] chr5 (75 HSPs)
chr5 (1-70)||(39086530-39086599)
chr5 (1-69)||(23155538-23155606)
chr5 (36-123)||(35662197-35662284)
chr5 (1-122)||(15559062-15559183)
chr5 (32-119)||(42746803-42746890)
chr5 (1-59)||(39861753-39861811)
chr5 (36-113)||(5630235-5630312)
chr5 (36-117)||(11660792-11660873)
chr5 (1-70)||(11660944-11661013)
chr5 (36-117)||(22695504-22695585)
chr5 (36-121)||(22830752-22830837)
chr5 (1-70)||(42746532-42746601)
chr5 (1-55)||(3340603-3340657)
chr5 (36-122)||(16552241-16552327)
chr5 (1-59)||(20134372-20134430)
chr5 (1-59)||(35662080-35662138)
chr5 (1-70)||(7286766-7286835)
chr5 (1-70)||(39166302-39166371)
chr5 (37-116)||(22671962-22672041)
chr5 (36-107)||(39166160-39166231)
chr5 (36-117)||(15059597-15059679)
chr5 (36-117)||(20134198-20134279)
chr5 (1-70)||(36864080-36864149)
chr5 (36-120)||(7286918-7287001)
chr5 (7-70)||(11376543-11376606)
chr5 (36-114)||(703732-703810)
chr5 (36-121)||(36864232-36864317)
chr5 (1-69)||(5411719-5411787)
chr5 (22-70)||(15059467-15059515)
chr5 (36-92)||(33857378-33857434)
chr5 (36-116)||(39861579-39861659)
chr5 (1-44)||(11660806-11660849)
chr5 (1-43)||(16552260-16552302)
chr5 (1-59)||(20696300-20696358)
chr5 (36-114)||(23155807-23155885)
chr5 (1-43)||(39861592-39861634)
chr5 (60-122)||(39861768-39861830)
chr5 (1-43)||(42746832-42746874)
chr5 (1-70)||(703880-703949)
chr5 (60-116)||(11660970-11661026)
chr5 (1-44)||(703743-703786)
chr5 (1-43)||(20134212-20134254)
chr5 (60-122)||(20134387-20134449)
chr5 (1-43)||(22830777-22830819)
chr5 (1-43)||(25671277-25671319)
chr5 (1-39)||(36864261-36864299)
chr5 (36-114)||(39086670-39086748)
chr5 (36-117)||(3340743-3340824)
chr5 (60-117)||(35662066-35662123)
chr5 (60-117)||(36864066-36864123)
chr5 (60-117)||(39086516-39086573)
chr5 (66-122)||(5411750-5411806)
chr5 (3-43)||(5630260-5630300)
chr5 (40-92)||(20696152-20696204)
chr5 (1-43)||(15059622-15059665)
chr5 (1-44)||(22671985-22672028)
chr5 (60-115)||(23155526-23155581)
chr5 (23-70)||(33857505-33857552)
chr5 (1-43)||(22695529-22695571)
chr5 (9-71)||(25671111-25671173)
chr5 (1-43)||(35662222-35662264)
chr5 (1-39)||(39166164-39166202)
chr5 (60-122)||(39166328-39166390)
chr5 (32-70)||(42746683-42746721)
chr5 (60-117)||(3340589-3340646)
chr5 (2-43)||(20696142-20696183)
chr5 (35-64)||(33868793-33868822)
chr5 (60-117)||(42746518-42746575)
chr5 (7-43)||(7286943-7286979)
chr5 (38-70)||(8949471-8949503)
chr5 (35-71)||(8949511-8949547)
chr5 (36-92)||(11376405-11376461)
chr5 (35-71)||(16668201-16668237)
chr5 (38-70)||(16668245-16668277)
chr5 (71-115)||(30783586-30783630)
[»] chr2 (64 HSPs)
chr2 (36-122)||(16111668-16111755)
chr2 (36-122)||(30777289-30777375)
chr2 (1-70)||(19246675-19246744)
chr2 (5-69)||(15252983-15253047)
chr2 (1-69)||(42364505-42364573)
chr2 (36-117)||(12449053-12449134)
chr2 (1-70)||(24183559-24183628)
chr2 (1-70)||(31711523-31711592)
chr2 (1-70)||(31783806-31783875)
chr2 (1-70)||(37867167-37867236)
chr2 (36-121)||(42364657-42364742)
chr2 (1-59)||(20661568-20661626)
chr2 (36-117)||(20661395-20661476)
chr2 (1-70)||(22596466-22596535)
chr2 (1-70)||(34726758-34726827)
chr2 (36-116)||(31711663-31711742)
chr2 (1-59)||(22588491-22588549)
chr2 (36-117)||(22588317-22588398)
chr2 (40-121)||(37867323-37867404)
chr2 (1-57)||(12449218-12449274)
chr2 (1-69)||(44915454-44915522)
chr2 (36-115)||(34726605-34726684)
chr2 (1-59)||(20194000-20194058)
chr2 (1-43)||(37867344-37867386)
chr2 (36-117)||(22596303-22596384)
chr2 (36-117)||(25575322-25575403)
chr2 (36-117)||(44915290-44915371)
chr2 (47-107)||(15252848-15252908)
chr2 (1-69)||(16111526-16111594)
chr2 (60-116)||(20661583-20661639)
chr2 (1-44)||(12449067-12449110)
chr2 (1-44)||(25575336-25575379)
chr2 (66-117)||(34726790-34726841)
chr2 (1-43)||(15252852-15252894)
chr2 (60-117)||(31783792-31783849)
chr2 (2-43)||(42364682-42364723)
chr2 (60-117)||(44915479-44915536)
chr2 (18-70)||(3147248-3147300)
chr2 (19-59)||(35126666-35126706)
chr2 (23-70)||(1095330-1095377)
chr2 (9-44)||(22588339-22588374)
chr2 (5-44)||(31711687-31711726)
chr2 (60-123)||(42364485-42364548)
chr2 (60-122)||(20194015-20194077)
chr2 (60-114)||(22588506-22588560)
chr2 (1-43)||(22596317-22596359)
chr2 (36-117)||(31783946-31784030)
chr2 (1-43)||(34726617-34726659)
chr2 (60-117)||(22596492-22596549)
chr2 (6-43)||(30777313-30777350)
chr2 (60-117)||(31711509-31711566)
chr2 (36-92)||(1095203-1095259)
chr2 (36-80)||(24183433-24183477)
chr2 (50-117)||(15150269-15150336)
chr2 (1-44)||(20661409-20661452)
chr2 (23-70)||(30777488-30777535)
chr2 (1-43)||(31783971-31784016)
chr2 (1-43)||(15150280-15150322)
chr2 (60-114)||(19246664-19246718)
chr2 (36-70)||(36636172-36636206)
chr2 (60-113)||(16111516-16111569)
chr2 (36-89)||(20570929-20570982)
chr2 (1-37)||(16111700-16111736)
chr2 (35-71)||(43823329-43823365)
[»] scaffold0129 (3 HSPs)
scaffold0129 (1-70)||(20082-20151)
scaffold0129 (36-82)||(19954-20000)
scaffold0129 (66-122)||(20114-20170)
[»] chr6 (36 HSPs)
chr6 (1-70)||(10588915-10588984)
chr6 (36-117)||(25119105-25119186)
chr6 (1-70)||(20522810-20522879)
chr6 (36-117)||(21384788-21384869)
chr6 (36-117)||(22857487-22857568)
chr6 (1-70)||(22857639-22857708)
chr6 (1-69)||(21384952-21385020)
chr6 (1-70)||(11140418-11140486)
chr6 (36-121)||(14237773-14237858)
chr6 (1-69)||(25119433-25119501)
chr6 (1-71)||(7371059-7371129)
chr6 (1-63)||(19284384-19284446)
chr6 (40-121)||(10698572-10698653)
chr6 (36-121)||(20522664-20522749)
chr6 (1-44)||(22857501-22857544)
chr6 (36-121)||(19281278-19281363)
chr6 (10-69)||(19281447-19281506)
chr6 (1-43)||(25119119-25119161)
chr6 (52-117)||(129210-129274)
chr6 (60-117)||(22857665-22857722)
chr6 (5-70)||(26713136-26713201)
chr6 (23-71)||(30387161-30387209)
chr6 (1-39)||(19281296-19281334)
chr6 (1-43)||(20522682-20522724)
chr6 (60-122)||(21384977-21385039)
chr6 (60-117)||(7371086-7371143)
chr6 (60-117)||(10588941-10588998)
chr6 (60-117)||(25119458-25119515)
chr6 (21-53)||(14237958-14237990)
chr6 (40-121)||(25066204-25066282)
chr6 (1-43)||(10698590-10698632)
chr6 (1-43)||(14237791-14237833)
chr6 (1-43)||(21384802-21384844)
chr6 (25-59)||(25066367-25066401)
chr6 (60-117)||(19284370-19284427)
chr6 (1-38)||(25066222-25066259)
[»] scaffold0516 (2 HSPs)
scaffold0516 (36-117)||(1212-1293)
scaffold0516 (1-43)||(1237-1279)
[»] scaffold0249 (3 HSPs)
scaffold0249 (36-117)||(23543-23624)
scaffold0249 (1-70)||(23695-23766)
scaffold0249 (1-43)||(23557-23599)
[»] scaffold0117 (1 HSPs)
scaffold0117 (1-117)||(17856-17970)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-81)||(51918-51998)
scaffold0009 (66-113)||(51908-51955)
[»] scaffold0664 (2 HSPs)
scaffold0664 (40-121)||(3122-3203)
scaffold0664 (1-43)||(3143-3185)
[»] scaffold0126 (1 HSPs)
scaffold0126 (1-59)||(37646-37704)
[»] scaffold0102 (4 HSPs)
scaffold0102 (1-59)||(33629-33687)
scaffold0102 (36-117)||(15575-15656)
scaffold0102 (36-117)||(33781-33861)
scaffold0102 (60-117)||(33615-33672)
[»] scaffold0031 (3 HSPs)
scaffold0031 (1-71)||(80828-80898)
scaffold0031 (40-92)||(80691-80743)
scaffold0031 (58-117)||(80853-80912)
[»] scaffold0004 (2 HSPs)
scaffold0004 (1-70)||(96012-96081)
scaffold0004 (60-114)||(96001-96055)
[»] scaffold0019 (1 HSPs)
scaffold0019 (36-117)||(72666-72747)
[»] scaffold0291 (3 HSPs)
scaffold0291 (22-70)||(9672-9720)
scaffold0291 (36-92)||(9534-9590)
scaffold0291 (9-43)||(9531-9565)
[»] scaffold0035 (2 HSPs)
scaffold0035 (36-92)||(75716-75772)
scaffold0035 (9-53)||(75864-75908)
[»] scaffold0154 (1 HSPs)
scaffold0154 (36-70)||(37261-37295)


Alignment Details
Target: chr8 (Bit Score: 357; Significance: 0; HSPs: 75)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 101 - 485
Target Start/End: Complemental strand, 2541030 - 2540647
Alignment:
Q  101 ttatgcatcataaccgcgcccggtcagttgtttaagatgatacataccccaggtcgatcacatgatttgcattgccaccaagtcgaaccatctccatcga 200  Q
    ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2541030 ttatgcaccataaccgcgcccggtcaattgtttaagatgatacataccccaggtcgatcacatgatttgcattgccaccaagtcgaaccatctccatcga 2540931  T
Q  201 gtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaatgtaccttagaaggtgcatctat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2540930 gtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaatgtaccttagaaggtgcaactat 2540831  T
Q  301 tttcccttcaagctacaaaaagatagatggcaaaaatataaaacaaatataatttctttaatcattttaaaagccgcaattaaaacttatacatatgatt 400  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2540830 tttcccttcaagctacaaaaagatagatggcaaaaatacaaaacaaatataatttctttaatcattttaaaagccgcaattaaaacttataca-atgatt 2540732  T
Q  401 ataagtttattgtactaggttttaaaagtgaatgttagatatattaaatacctgaataagaatatgtttgttggtgcaaggaccg 485  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2540731 ataagtttattgtactaggtcttaaaagtgaatgttagatatattaaatacctgaataagaatatgtttgttggtgcaaggaccg 2540647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 123 - 489
Target Start/End: Complemental strand, 2531685 - 2531307
Alignment:
Q  123 gtcagttgtttaagatgatacataccccaggtcgatcacatgatttgcattgccaccaagtcgaaccatctccatcgagtactcctcgaccatgaccatt 222  Q
    |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |     
T  2531685 gtcaattgtataagatgatacataccccaggtcgagcacatgatttgcattgccaccaagtcgaaccatctccatcgagtactcctcgaccattaccttc 2531586  T
Q  223 aattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaatgtaccttagaaggtgcatctattttcccttcaagctacaaaaag 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||||||||||||||||||    
T  2531585 aattgtgagtccttctacagattgcacggtaatccaatatgactgagctttccaacctacctttgaaggtgcaactattttcccttcaagctacaaaaag 2531486  T
Q  323 atagatggcaaaaatataaaacaaatataatttctttaatcattttaaaagccgcaatt------------aaaacttatacatatgattataagtttat 410  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||            |||||||||||||||||||||||||||||    
T  2531485 atagatggcaaaaatacaaaacaaatataatttctttaaatattttaaaagccgcaattaaaaatacaattaaaacttatacatatgattataagtttat 2531386  T
Q  411 tgtactaggttttaaaagtgaatgttagatatattaaatacctgaataagaatatgtttgttggtgcaaggaccgctaa 489  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2531385 tgtactaggtcttaaaagtgaatgttagatatattaaatacctgaataagaatatttttgttggtgcaaggaccgctaa 2531307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10586092 - 10586023
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  10586092 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 10586023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 185894 - 185963
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  185894 taaggaaatccttatgcactctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 185963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 17656631 - 17656700
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  17656631 taaggaaatccttatgcactctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 17656700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 34343262 - 34343331
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||    
T  34343262 taaggaaatctttatgcaccctacataaattcagaaatggttttgaagtacaactcacaaaaaccatttc 34343331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 34343415 - 34343496
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| ||||||||| | |||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  34343415 aatggttttggaatacaactcatagaaaccatttctgaatttatgcagggtgcataataatttccttatgcaccataaccgc 34343496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 41 - 117
Target Start/End: Original strand, 35448579 - 35448655
Alignment:
Q  41 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  35448579 ttttggagtacaactcacataaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 35448655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 17656782 - 17656863
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||    |||||||| |||||||||    
T  17656782 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataagaaaaaccttatgcaccataaccgc 17656863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24473275 - 24473207
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||| |||||    
T  24473275 taaggaaatccttatgcaccctgtataaattcag-aatggttttggagtacaactcacaacaaccatttc 24473207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 10 - 70
Target Start/End: Complemental strand, 1773311 - 1773251
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  1773311 ccttatgtaccctgaataaattcagaaatggttttggagtacaactcacaaaaaccatttc 1773251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 23567607 - 23567687
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    |||| ||||||| ||||||||| | |||| ||||||||||||||||||||||||||| ||||| |||||||| ||||||||    
T  23567607 aatgattttggaatacaactcatagaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccg 23567687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 1672895 - 1672973
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    |||||||||| | ||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| ||||||    
T  1672895 aatggttttgaaatacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 5106759 - 5106697
Alignment:
Q  8 atccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| |||||    
T  5106759 atccttatgcaccctgcataaatccagaaatggttttagaatacaactcacaaaaaccatttc 5106697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15808898 - 15808952
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaact 55  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15808898 taagaaaatccttatgcaccctgcataaatccagaaatggttttggagtacaact 15808952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 1829743 - 1829582
Alignment:
Q  175 ccaccaagtcgaaccatctccatcgagtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttc 274  Q
    ||||||||| ||||| |||||||| ||| ||||| |||||| ||||| |||||||||||| | |||| |||  |  |||| ||||||||| || ||||||    
T  1829743 ccaccaagtagaaccgtctccatcaagtcctccttgaccattaccatcaattgtgagtccatttacatattcaatagtaaaccaatatgattgtgctttc 1829644  T
Q  275 caatgtaccttagaaggtgcatctattttcccttcaagctacaa-aaagatagatggcaaaa 335  Q
     ||| | ||||||| |||||| |||| | ||||||||||| ||| | |||||||||| ||||    
T  1829643 gaatttgccttagagggtgcaactatctgcccttcaagctgcaatatagatagatggaaaaa 1829582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 175 - 335
Target Start/End: Complemental strand, 1864188 - 1864027
Alignment:
Q  175 ccaccaagtcgaaccatctccatcgagtactcctcgaccatgaccattaattgtgagtccttctacagattgcacggtaatccaatatgactgagctttc 274  Q
    ||||||||| ||||| |||||||| ||| ||||| |||||| ||||| |||||||||||| | |||| |||  |  |||| ||||||||| || ||||||    
T  1864188 ccaccaagtagaaccgtctccatcaagtcctccttgaccattaccatcaattgtgagtccatttacatattcaatagtaaaccaatatgattgtgctttc 1864089  T
Q  275 caatgtaccttagaaggtgcatctattttcccttcaagctacaa-aaagatagatggcaaaa 335  Q
     ||| | ||||||| |||||| |||| | ||||||||||| ||| | |||||||||| ||||    
T  1864088 gaatttgccttagagggtgcaactatctgcccttcaagctgcaatatagatagatggaaaaa 1864027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 15809804 - 15809885
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||| | |||| ||||||| ||||||| |||||||||||  |||| |||||||| |||||||||    
T  15809804 aatggttttggagtacaactcagagaaaccatttctgaatttatggagggtgcataaggatttccttatgcaccataaccgc 15809885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 1773170 - 1773114
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1773170 aatgattttggagtacaactcacaaaaaccatttctggatgtatgcagggtgcataa 1773114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17792923 - 17792865
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||||||||||||||| |||||| |  ||||||||||||||||||    
T  17792923 taaggaaatccttatgcaccctgcataaatccagaaacgaatttggagtacaactcaca 17792865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 27506786 - 27506708
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    |||||||||||| ||||||| ||| |||| |||| ||||||||||||||||||||||  |||| |||||||| ||||||    
T  27506786 aatggttttggaatacaacttacataaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataac 27506708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 32644266 - 32644220
Alignment:
Q  13 tatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  32644266 tatgcaccctgcataaatccagaaatggttttggagtacaactcaca 32644220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 10585940 - 10585855
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||| | |||| |||||| |||||||||| |||||||||  |||| |||||||| | |||||| ||||    
T  10585940 aatggttttggagtacaactcatagaaaccatttctagatttatgcatggtgcataaggattttcttatgcaccgtaaccgagccc 10585855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 17792772 - 17792716
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    ||||||||||| |||||||||| | |||| |||||||||||||||||||||||||||    
T  17792772 aatggttttggcgtacaactcaaagaaaccatttctggatttatgcagggtgcataa 17792716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 27506916 - 27506868
Alignment:
Q  22 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  27506916 tgcataaattcataaatggttttggagtacaactcacagaaactatttc 27506868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 28979362 - 28979291
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgca 107  Q
    |||| ||||| | |||||||||||||||  |||||||||||||||||||||||||||  |||| ||||||||    
T  28979362 aatgattttgaaatacaactcacaaaaatcatttctggatttatgcagggtgcataaggatttccttatgca 28979291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 28979485 - 28979438
Alignment:
Q  6 aaatccttatgcaccctgcataaattcagaaatggttttggagtacaa 53  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||    
T  28979485 aaatccttatgcactctgcataaatccagaaatggttttggagtacaa 28979438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1672962 - 1672920
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  1672962 taaggaaatccttatgcaccctgcataaatccagaaatggttt 1672920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 10586049 - 10586111
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||||||||||||| ||||    
T  10586049 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcatcataaccgcacccg 10586111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15809871 - 15809829
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  15809871 taaggaaatccttatgcaccctccataaattcagaaatggttt 15809829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18161301 - 18161371
Alignment:
Q  1 taaggaaatccttatgcaccctgcat-aaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||| ||| |||| ||||||| |||||||||||||| ||||| |||| |||||    
T  18161301 taaggaaatccttatgcaccctacattaaatccagaaatagttttggagtacaaatcacagaaaccatttc 18161371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 18757203 - 18757257
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    ||||| |||||||| |||||||||||| ||| |||||||||||||||||||||||    
T  18757203 gaaattcttatgcatcctgcataaatttagagatggttttggagtacaactcaca 18757257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 21120290 - 21120373
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||| |||||  |||||| |||| |||||||||||||| |||||||||||| ||||| |||| ||| |||| ||||||||    
T  21120290 aatggttttgaagtac--ctcacacaaaccatttctggatttatacagggtgcataagaattttcttacgcaccatagccgcgccc 21120373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35448641 - 35448599
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  35448641 taaggaaatccttatgcaccctgcataaatccagaaatggttt 35448599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 186045 - 186126
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| ||||| | |||||||||| ||||| |||||||||||||| ||||||||||||  |||| ||||| || |||||||||    
T  186045 aatgattttgaaatacaactcacgaaaaccatttctggatttatacagggtgcataaggatttccttatacaccataaccgc 186126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 15808941 - 15808884
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  15808941 aaaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 15808884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23567499 - 23567544
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttgg 46  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||    
T  23567499 taaggaaatccttatgcactctgcataaatccagaaatggttttgg 23567544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 32644115 - 32644043
Alignment:
Q  47 agtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 120  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||||  | || |||||||| ||||||||||||    
T  32644115 agtacaacttacataaaccatttctggatttatgcagggtgcataagga-ttccttatgcaccataaccgcgcc 32644043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 2541197 - 2541157
Alignment:
Q  24 cataaattcagaaatggttttggagtacaactcacaaaaac 64  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  2541197 cataaattcagaaatggttttggagtacaactcacagaaac 2541157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 53 - 117
Target Start/End: Original strand, 23347702 - 23347766
Alignment:
Q  53 actcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||| |||| ||||||||||||||||||||| |||||  |||| |||||||| |||||||||    
T  23347702 actcacagaaaccatttctggatttatgcagggttcataaggattttcttatgcaccataaccgc 23347766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 186112 - 186069
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||| |||||| |||||||||||||    
T  186112 taaggaaatccttatgcaccctgtataaatccagaaatggtttt 186069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 17792887 - 17792942
Alignment:
Q  67 tttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  17792887 tttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 17792942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 23504512 - 23504551
Alignment:
Q  6 aaatccttatgcaccctgcataaattcagaaatggttttg 45  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  23504512 aaatccttatgcaccctgtataaattcagaaatggttttg 23504551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 23504709 - 23504666
Alignment:
Q  16 gcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  23504709 gcaccctgcataaatctagaaatggttttggagtacaactcaca 23504666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 28979295 - 28979338
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||||||||||||||| |||||||| ||||    
T  28979295 taaggaaatccttatgcaccctgcataaatccagaaatgatttt 28979338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 35116768 - 35116811
Alignment:
Q  14 atgcaccctgcataaattcagaaatggttttggagtacaactca 57  Q
    ||||| |||||||||||||||||||||||||| |||||||||||    
T  35116768 atgcatcctgcataaattcagaaatggttttgaagtacaactca 35116811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 23504573 - 23504488
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||| |||||||||||||||||||||| | ||||||| |||||| ||||||||||||  ||||  |||||||  |||||| ||||||    
T  23504573 aatgattttggagtacaactcacaaaacc-atttctgaatttatacagggtgcataaggatttttttatgcactataaccacgcccg 23504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23567674 - 23567632
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  23567674 taaggaaattcttatgcaccctgcataaatccagaaatggttt 23567632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27506719 - 27506761
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  27506719 taaggaaatccttatgcaccctgcataaatccaaaaatggttt 27506761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 34343482 - 34343440
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  34343482 taaggaaattattatgcaccctgcataaattcagaaatggttt 34343440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35448247 - 35448305
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||| || |||| ||| ||||||| ||||||||||| ||||||||||||||||    
T  35448247 taaggaaatcattttgcaacctccataaatccagaaatggttatggagtacaactcaca 35448305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 41642173 - 41642227
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcat 90  Q
    |||||||||||| |||||||||||  ||| |||||||||| ||||||||||||||    
T  41642173 aatggttttggaatacaactcacaggaacaatttctggatatatgcagggtgcat 41642227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 45409486 - 45409404
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa-taatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||| | |||| |||| | |||||||| |||||||||||  | ||| |||||||| |||||||||    
T  45409486 aatggttttggagtacaactcaaagaaaccattttttgatttatgtagggtgcataaggattttccttatgcaccataaccgc 45409404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 205007 - 204950
Alignment:
Q  41 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataattt 98  Q
    |||| |||||||||||||| |||  ||||||| ||||||||||||||||||| |||||    
T  205007 ttttagagtacaactcacagaaatcatttctgaatttatgcagggtgcataagaattt 204950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 41 - 98
Target Start/End: Complemental strand, 319844 - 319787
Alignment:
Q  41 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataattt 98  Q
    |||| |||||||||||||| |||  ||||||| ||||||||||||||||||| |||||    
T  319844 ttttagagtacaactcacagaaatcatttctgaatttatgcagggtgcataagaattt 319787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 17656674 - 17656617
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||| ||||||||  |||| |||||||| |||||||||    
T  17656674 aaaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgc 17656617  T

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Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 23567542 - 23567485
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||| ||||||||  |||| |||||||| |||||||||    
T  23567542 aaaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgc 23567485  T

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Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 43
Target Start/End: Original strand, 32644065 - 32644101
Alignment:
Q  7 aatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||| ||||||||||||    
T  32644065 aatccttatgcaccctgcataaatccagaaatggttt 32644101  T

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Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 35448284 - 35448228
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||||||||||| ||| |||| ||| |||| |||||||||||||||||| ||||    
T  35448284 atttctggatttatggaggttgcaaaatgatttccttatgcatcataaccgcacccg 35448228  T

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Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 44
Target Start/End: Original strand, 21120209 - 21120248
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||| ||||||||| |||||||||||||    
T  21120209 gaaatccttatgcaccatgcataaatccagaaatggtttt 21120248  T

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Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 204949 - 204983
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatg 39  Q
    ||||| |||||||||||||||||||||||||||||    
T  204949 gaaattcttatgcaccctgcataaattcagaaatg 204983  T

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Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 319786 - 319820
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatg 39  Q
    ||||| |||||||||||||||||||||||||||||    
T  319786 gaaattcttatgcaccctgcataaattcagaaatg 319820  T

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Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 23 - 69
Target Start/End: Original strand, 6783468 - 6783514
Alignment:
Q  23 gcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||| | ||||| ||||||||||||||||||| |||||||||    
T  6783468 gcataaatttataaatgattttggagtacaactcacagaaactattt 6783514  T

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Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8439219 - 8439161
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||| ||||||| ||| ||||||| || ||||||||||  |||||||||||||    
T  8439219 taaggaaatctttatgcatcctccataaatccataaatggttttcaagtacaactcaca 8439161  T

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Target: chr8; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23347752 - 23347710
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||| ||||||||||| ||||||||||||| ||||||||||||    
T  23347752 taagaaaatccttatgaaccctgcataaatccagaaatggttt 23347710  T

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Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 17792714 - 17792747
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||| ||||||||||||    
T  17792714 ccttatgcaccctgcataaatccagaaatggttt 17792747  T

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Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 34343305 - 34343248
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||| ||||||| |||||||||||  |||| |||||||| |||||||||    
T  34343305 aaaaccatttctgaatttatgtagggtgcataaagatttccttatgcaccataaccgc 34343248  T

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Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 45409780 - 45409727
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaa 63  Q
    ||||||| ||||| ||||||||||||||| ||||| || || ||||||||||||    
T  45409780 ccttatgtaccctccataaattcagaaatagttttagaatataactcacaaaaa 45409727  T

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Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 1773110 - 1773146
Alignment:
Q  8 atccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||||| || |||||||||||||    
T  1773110 atccttatgcaccctgcatacatccagaaatggtttt 1773146  T

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Target: chr8; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 2541075 - 2541031
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagg 84  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||    
T  2541075 gttttggagtacaactcacagaaaccatttctaaatttatgcagg 2541031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 92
Target Start/End: Original strand, 5106723 - 5106755
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataa 92  Q
    ||||| |||||||||||||||||||||||||||    
T  5106723 aaaaccatttctggatttatgcagggtgcataa 5106755  T

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Target: chr8; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 11 - 43
Target Start/End: Complemental strand, 17656839 - 17656807
Alignment:
Q  11 cttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||| ||||||||||||    
T  17656839 cttatgcaccctgcataaatccagaaatggttt 17656807  T

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Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 104
Target Start/End: Original strand, 18161453 - 18161521
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttat 104  Q
    |||||||||||| ||||||||||| |||| |||| | |||||||| | | |||||||  ||||||||||    
T  18161453 aatggttttggaatacaactcacagaaaccatttttagatttatggatgatgcataaggatttacttat 18161521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 34647568 - 34647532
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  34647568 aaatggttttggagtacaactcacagaaaccatttct 34647532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 40022785 - 40022749
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  40022785 aaatggttttggagtacaactcacagaaaccatttct 40022749  T

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Target: chr3 (Bit Score: 89; Significance: 1e-42; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 50416493 - 50416609
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttac 100  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||  |||| |    
T  50416493 taaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaattcacaaaaaccatttctggatttatgcagggtgcataaggatttcc 50416592  T
Q  101 ttatgcatcataaccgc 117  Q
    ||||||| |||||||||    
T  50416593 ttatgcaccataaccgc 50416609  T

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Target: chr3; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 19012526 - 19012607
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  19012526 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 19012607  T

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Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 36185936 - 36185867
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  36185936 taaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcacaaaaaccatttc 36185867  T

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Target: chr3; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 36185806 - 36185721
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  36185806 aatggttttggagtacaactcacagaaaccatttctggatttatgcaggatgcataaggatttccttatgcaccataaccgcgccc 36185721  T

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Target: chr3; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 8036880 - 8036799
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  8036880 aatggttttgaagtataactcacaaaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 8036799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 21175232 - 21175309
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| || ||||| |||||    
T  21175232 aatggttttggagtacaactcacagaaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 21175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 27446244 - 27446175
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||| |||||    
T  27446244 taaggaaatccttatgcaccttgcataaattcagaaatggttttggagtacaattcacagaaaccatttc 27446175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 47225778 - 47225897
Alignment:
Q  6 aaatccttatgcaccctgcataaattc-aga---aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttact 101  Q
    ||||||||||||||||||||||||| | | |   ||||||||| |||||||||||||| |||| ||||||||||||||||||||| |||||  |||| ||    
T  47225778 aaatccttatgcaccctgcataaatcctacatctaatggttttagagtacaactcacagaaaccatttctggatttatgcagggtacataaggatttcct 47225877  T
Q  102 tatgcatcataaccgcgccc 121  Q
    |||||| |||||| ||||||    
T  47225878 tatgcaccataactgcgccc 47225897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 20127204 - 20127136
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||    
T  20127204 taagaaaatccttatgcaccctgcataaattcagaaatagttttggagtataactcacaaaaaccattt 20127136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 50416595 - 50416479
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttac 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||| | | |     | | ||||| |||||||||||||||||||||||||||  |||| |    
T  50416595 taaggaaatccttatgcaccctgcataaatccagaaatggtttttgtgaattgtactccaaaaccatttctggatttatgcagggtgcataaggatttcc 50416496  T
Q  101 ttatgcatcataaccgc 117  Q
    ||||||| |||||||||    
T  50416495 ttatgcaccataaccgc 50416479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 8037018 - 8036964
Alignment:
Q  3 aggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactca 57  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  8037018 aggaaatccttatgcaccctgcataaatccaaaaatggttttggagtacaactca 8036964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 12974092 - 12974007
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||| ||||| || |||||||||| |||| ||||||||||||| |||||||||||||  |||| |||||||| |||||||||||||    
T  12974092 aatgattttgcagaacaactcacagaaacaatttctggatttaggcagggtgcataaggatttccttatgcaccataaccgcgccc 12974007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47924397 - 47924328
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||| ||||||||||||| |||| |||||    
T  47924397 taaggaaatccttatgcaccctgcataaatcaagaaatgattttgcagtacaactcacagaaaccatttc 47924328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 49053301 - 49053220
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||| ||||||||||||| |||| ||||||| |||||||| |||||||||| ||||| |||||||| |||||| ||||||    
T  49053301 gttttgaagtacaactcacagaaaccatttctgaatttatgccgggtgcataagaatttccttatgcaccataactgcgccc 49053220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 30794862 - 30794930
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||| |||| ||||    
T  30794862 taaggaaatccttatgcaccctgcataaatctagaaatggttttggagtatagctcacagaaaccattt 30794930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 38345444 - 38345500
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||    
T  38345444 aatggttttggagtacaactcacagaaattatttctggatttatgcaggatgcataa 38345500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 14743567 - 14743625
Alignment:
Q  12 ttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||    
T  14743567 ttatgcaccctgcataaatctagaaatggttttggagtacaactcacataaattatttc 14743625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 47924245 - 47924157
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcata---ataatttacttatgcatcataaccgcgccc 121  Q
    |||||| ||| ||||||||||||| |||| ||||||||||||||||||||||||||   |  |||| |||||||| |||||||||||||    
T  47924245 aatggtattgaagtacaactcacagaaaccatttctggatttatgcagggtgcataaggaatatttccttatgcaccataaccgcgccc 47924157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12974221 - 12974153
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||| ||||||||| |||||||||| |||| |||||||||||| |||| |||||    
T  12974221 taaggaaatccttatgcacc-tgcataaatccagaaatggtgttggtgtacaactcacagaaaccatttc 12974153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 16653510 - 16653578
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||| |||||    
T  16653510 taaggaaattcttatgcacc-tgcataaatccagaaatggttttgaagtacaactcacagaaaccatttc 16653578  T

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Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19012405 - 19012473
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||| ||||||||| |||||||||||||| ||||||||||||| |||| |||||    
T  19012405 taaggaaattcttatgcacc-tgcataaatccagaaatggttttgaagtacaactcacagaaaccatttc 19012473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 49053457 - 49053388
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||| |||| |||||||||||||| ||||||| |||||| ||||||||||||| |||| |||||    
T  49053457 taaggaaatctttatccaccctgcataaatccagaaatagttttgaagtacaactcacagaaaccatttc 49053388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 8036813 - 8036856
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  8036813 taaggaaatccttatgcaccctgcataaatccagaaatggtttt 8036856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 27437912 - 27437833
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 115  Q
    |||||||||||| ||||||| ||| |||| ||||||| ||||||||| ||||||||| ||||| ||||| || |||||||    
T  27437912 aatggttttggaatacaacttacagaaaccatttctgaatttatgcatggtgcataaaaatttccttatacaccataacc 27437833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47729287 - 47729245
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47729287 taaggaaatccttatgcaccctacataaattcagaaatggttt 47729245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 20127161 - 20127218
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||| |||||||||||||||||||  |||| ||||||||||||| ||||    
T  20127161 aaaactatttctgaatttatgcagggtgcataaggattttcttatgcatcatagccgc 20127218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 36185893 - 36185950
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  36185893 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 36185950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 49053414 - 49053471
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||||||| ||||  |||| |||||||| |||||||||    
T  49053414 aaaactatttctggatttatgcagggtggataaagatttccttatgcaccataaccgc 49053471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 19012593 - 19012551
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||| |||||||||||||||||||| ||||||||||||    
T  19012593 taaggaaattcttatgcaccctgcataaatccagaaatggttt 19012551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36185739 - 36185781
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  36185739 taaggaaatccttatgcatcctgcataaatccagaaatggttt 36185781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47225879 - 47225837
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  47225879 taaggaaatccttatgtaccctgcataaatccagaaatggttt 47225837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 49053238 - 49053280
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||| ||||||||||| |||||||||||||||||||||    
T  49053238 taaggaaattcttatgcacccggcataaattcagaaatggttt 49053280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 49450589 - 49450547
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggttttggagtaca 52  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  49450589 ccttatgcaccctgcataaattcagaaatgattttagagtaca 49450547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 16653552 - 16653496
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  16653552 aaaaccatttctggatttatgca-ggtgcataagaatttccttatgcaccataaccgc 16653496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 19012447 - 19012391
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  19012447 aaaaccatttctggatttatgca-ggtgcataagaatttccttatgcaccataaccgc 19012391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 117
Target Start/End: Complemental strand, 38345332 - 38345279
Alignment:
Q  64 ctatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||||||||  ||||  ||||||| |||||||||    
T  38345332 ctatttctggatttatgcagggtgcataaagatttctttatgcaccataaccgc 38345279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 47729220 - 47729301
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||| |||||||  ||||| |||| ||||||| ||||||| |||||||||||  |||| |||||||| || ||||||    
T  47729220 aatggtttttgagtacatttcacagaaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccaaaaccgc 47729301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 21175297 - 21175257
Alignment:
Q  3 aggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  21175297 aggaaatccttatgcaccctgcataaatccagaaatagttt 21175257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 35222317 - 35222285
Alignment:
Q  4 ggaaatccttatgcaccctgcataaattcagaa 36  Q
    |||||||||||||||||||||||||||||||||    
T  35222317 ggaaatccttatgcaccctgcataaattcagaa 35222285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 51681190 - 51681146
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagg 84  Q
    |||||| | ||||||||||| ||||||||||||||||||||||||    
T  51681190 gttttgaaatacaactcacagaaactatttctggatttatgcagg 51681146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12974025 - 12974067
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||| ||||| ||||||| ||||    
T  12974025 taaggaaatccttatgcaccctgcctaaatccagaaattgttt 12974067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 27437845 - 27437887
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||  ||||||||| ||||||||||||||||||||||    
T  27437845 taaggaaatttttatgcaccatgcataaattcagaaatggttt 27437887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 47924186 - 47924220
Alignment:
Q  9 tccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  47924186 tccttatgcaccctgcataaatccagaaatggttt 47924220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 8036977 - 8037034
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||| ||||||||||||||||||||||  |||| || ||||| |||||||||    
T  8036977 aaaaccatttttggatttatgcagggtgcataaggatttcctcatgcaccataaccgc 8037034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 19384425 - 19384380
Alignment:
Q  72 ggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  19384425 ggatttatgcacggtgcataagaatttccttatgcaccataaccgc 19384380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 43
Target Start/End: Original strand, 20127023 - 20127056
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||| |||||||||||    
T  20127023 ccttatgcaccctgcataaatttagaaatggttt 20127056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 38345297 - 38345362
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||| ||||||||||||||||||| ||||||| | ||||||| | |||| ||| |||| |||||    
T  38345297 gaaatctttatgcaccctgcataaatccagaaatagatttggaggataacttacagaaaccatttc 38345362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 12974185 - 12974240
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||||||||||||| |||||||||  |||| |||||||| ||||||||| ||||    
T  12974185 atttctggatttatgca-ggtgcataaggatttccttatgcaccataaccgcacccg 12974240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 23755921 - 23755957
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  23755921 aaatggttttggagtacaactcacagaaaccatttct 23755957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 34562798 - 34562762
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  34562798 aaatggttttggagtacaactcacagaaaccatttct 34562762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 35221624 - 35221580
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagg 84  Q
    |||||||||||||||||||| |||| ||||||  |||||||||||    
T  35221624 gttttggagtacaactcacagaaaccatttctaaatttatgcagg 35221580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 47924360 - 47924408
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    |||||| ||||||||||||||||||||  |||| |||||||| ||||||    
T  47924360 atttcttgatttatgcagggtgcataaggatttccttatgcaccataac 47924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 77 - 117
Target Start/End: Complemental strand, 49450533 - 49450493
Alignment:
Q  77 tatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||| |||||||| |||||||||    
T  49450533 tatgctgggtgcataataatttccttatgcaccataaccgc 49450493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 1e-33; HSPs: 107)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 25715758 - 25715637
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttac 100  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| | ||||||||||| |||| |||| ||||||||||||||||||||||  |||| |    
T  25715758 taagaaaatccttatgcaccctgcataaatccagaaatggttttgaaatacaactcacagaaaccatttttggatttatgcagggtgcataaggatttcc 25715659  T
Q  101 ttatgcatcataaccgcgcccg 122  Q
    ||||||| ||||||| ||||||    
T  25715658 ttatgcaccataaccacgcccg 25715637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31763139 - 31763070
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  31763139 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 31763070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 37059946 - 37059877
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37059946 taagaaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaaccatttc 37059877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 53865207 - 53865292
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  53865207 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 53865292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 6806492 - 6806579
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||||||||||  | |||||||||||||||||||||||||||||||||||||| | |||| |||||| |||||||| |||||||||||    
T  6806492 gaaatccttatatatcctgcataaattcagaaatggttttggagtacaactcaaagaaaccatttctagatttatgtagggtgcataa 6806579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 36 - 123
Target Start/End: Complemental strand, 31763009 - 31762922
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 123  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |||| |||||||| |||||||||| ||||    
T  31763009 aatggttttggagtacaactcacaaaaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataaccgcgtccgg 31762922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 36309581 - 36309667
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||||  |||| |||||||| ||||||||||||||    
T  36309581 aatggttttgaagtacaactcacagaaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataaccgcgcccg 36309667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1492685 - 1492754
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||| |||||    
T  1492685 taaggaaatccttatgcaccctgcataaatctagaaatggttttggagtacaactcacagaaaccatttc 1492754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 6841897 - 6841820
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  6841897 gttttggagtacaactcacataaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 6841820  T

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Target: chr4; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 8165842 - 8165761
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  8165842 aatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 8165761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8166109 - 8166040
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  8166109 taaggaactccttatgcatcctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 8166040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12722969 - 12722900
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  12722969 taaggaaattcttatgcaccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 12722900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 21995683 - 21995752
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  21995683 taaggaaatccttatgcaccctgcataaatccataaatggttttggagtacaactcacagaaaccatttc 21995752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43374460 - 43374529
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  43374460 taaggaaatccttatgtaccctgcataaatccagaaatggttttggagtacaactcacataaaccatttc 43374529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 54895417 - 54895486
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  54895417 taagaaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 54895486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 38010674 - 38010754
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||  |||| | |||||| ||||||||    
T  38010674 aatggttttggagtacaactcacataaactatttctgaatttatgcagggtgcataaggatttccgtatgcaccataaccg 38010754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 2124424 - 2124338
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||| ||||||||||||| |||| |||| || |||||||||||||||||||  |||| |||||||| ||||||||||||||    
T  2124424 aatggttttgaagtacaactcacataaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgcgcccg 2124338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 12722818 - 12722736
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgc-agggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||  |||| |||||||| |||||||||    
T  12722818 aatggttttggagtacaactcacagaaaccatttctggatttatgcaagggtgcataaggatttccttatgcaccataaccgc 12722736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 33871309 - 33871227
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcag 83  Q
    ||||||||||||||||||||||||||| ||  | |||| |||||||||||||||| |||||||| |||||| |||||||||||    
T  33871309 taaggaaatccttatgcaccctgcatagatctaaaaatagttttggagtacaacttacaaaaaccatttctagatttatgcag 33871227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36309429 - 36309487
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  36309429 taaggaaatccttatgcaccctgcataaatccagaaatgattttggagtacaactcaca 36309487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 2124576 - 2124507
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| |||| |||||    
T  2124576 taaggaaattcttatgcaccctgcataaatccagaaatggttttggagtaaaactcacagaaaccatttc 2124507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 8157320 - 8157251
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||| |||| |||||    
T  8157320 taaggaaatccttatgcaccctgcataaatctagaaatgattttggagtacaactcacagaaaccatttc 8157251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 33883370 - 33883293
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||||||||  |||| |||||||| |||||||||    
T  33883370 gttttggagtacaactcacaaaaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataaccgc 33883293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 33883514 - 33883445
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  33883514 taaggaaatcattatgcaccctgcataaatccaaaaatggttttggagtacaactcacataaaccatttc 33883445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36924254 - 36924323
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| |||| |||||    
T  36924254 taaggaaatccttatgcaccctgcataaatccaaaaatagttttggagtacaactcacagaaaccatttc 36924323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 6768416 - 6768472
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactca 57  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||    
T  6768416 taaggaaattcttatgcaccctgcataaatttagaaatggttttggagtacaactca 6768472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10374056 - 10374124
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||| |||| ||||    
T  10374056 taaggaaatctttatgcaccctgcataaatccagaaatgattttggagtacaactcacagaaaccattt 10374124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 27873018 - 27872962
Alignment:
Q  13 tatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27873018 tatgcaccctgcataaattcagaaatggttttgaagtacaactcacagaaactattt 27872962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 9813176 - 9813118
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||    
T  9813176 taaggaaatctttatgcaccctgcataaattcagaaatgattttggagtataactcaca 9813118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 16475051 - 16474982
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||| ||||||| ||||||||||| || ||||||||||||||||||||||||| |||| |||||    
T  16475051 taaggaaatctttatgcatcctgcataaatccataaatggttttggagtacaactcacagaaaccatttc 16474982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17109949 - 17109881
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| |||| |||||    
T  17109949 taaggaaatccttatgcaccctgcataaatcca-aaatgattttggagtacaactcacagaaaccatttc 17109881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 37059791 - 37059706
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    ||||||||||||||| ||||| || |||  ||||||||||||||||| |||||||||  |||| |||||||| |||||||||||||    
T  37059791 aatggttttggagtataactcgcataaaacatttctggatttatgcaaggtgcataaggatttccttatgcaccataaccgcgccc 37059706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 120
Target Start/End: Complemental strand, 38563885 - 38563801
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 120  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||| || ||||  |||| ||||||||  |||||||||||    
T  38563885 aatggttttggagtacaactcacacaaaccatttatggatttatgcaggatgtataaggatttccttatgcactataaccgcgcc 38563801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 53865077 - 53865145
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||||||||| |||||||| ||||||||||  |||||||||||||||||||||||||| ||||| ||||    
T  53865077 taaggaaatctttatgcactctgcataaatctagaaatggttttggagtacaactcacgaaaaccattt 53865145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Original strand, 54895547 - 54895626
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 115  Q
    |||||||||| | ||||||||||| |||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||    
T  54895547 aatggttttgaaatacaactcacagaaaccatttttggatttatgcagggtgcataaggatttccttatgcaccataacc 54895626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 30779737 - 30779679
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||| |||||||||||    
T  30779737 taaggaaatccttatgcatcctgtataaattcataaatggttttggaatacaactcaca 30779679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 38563987 - 38563929
Alignment:
Q  6 aaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaac 64  Q
    ||||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||    
T  38563987 aaatccttatgcatcctgcatgaattcataaatggttttggagtacaactcacagaaac 38563929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 2124533 - 2124590
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  2124533 aaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 2124590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 12722926 - 12722983
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  12722926 aaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 12722983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 17109799 - 17109718
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| ||||||||||| |||  ||||||||||||||||| ||| |||||  |||| |||||||| |||||||||    
T  17109799 aatggttttggaatacaactcacagaaatcatttctggatttatgcaaggtacataaggatttccttatgcaccataaccgc 17109718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 30779423 - 30779342
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||| ||||||||||||| | || |||| |||||||||||| |||||||||  |||| |||||||| |||||||||    
T  30779423 aatggttttgaagtacaactcacagagaccatttatggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 30779342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 43375485 - 43375566
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||| |||||||||||| |||||  ||||||| |||||||||||||||||||  |||| | |||||| |||||||||    
T  43375485 aatggttttagagtacaactcaaaaaaatcatttctgaatttatgcagggtgcataaggatttccgtatgcaccataaccgc 43375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 47567909 - 47567978
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| ||||||||||||||| ||||||||| ||||||| |||||||||||||| ||||| |||| |||||    
T  47567909 taagaaaatccttatgcaccttgcataaatccagaaatagttttggagtacaattcacagaaaccatttc 47567978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 53526416 - 53526497
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| ||||||||||||||||| | |||| ||||| | ||||||||||||| ||||| ||||| |||||||| |||||||||    
T  53526416 aatgattttggagtacaactcatagaaaccatttcggaatttatgcagggtacataagaatttccttatgcaccataaccgc 53526497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 9967761 - 9967705
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||| |||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  9967761 aatgattttggagtaaaactcacaaaaaccatttctgaatttatgcagggtgcataa 9967705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Complemental strand, 41025274 - 41025226
Alignment:
Q  21 ctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  41025274 ctgcataaattcagaaatgattttggagtacaactcacagaaactattt 41025226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 53526264 - 53526320
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactca 57  Q
    |||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  53526264 taagaaaatccttatgcactttgcataaatccagaaatggttttggagtacaactca 53526320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 55660469 - 55660405
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||||| ||||||||| |||||||||||||||||| |||||||| ||| ||||||||||| ||||    
T  55660469 gaaatctttatgcaccttgcataaattcagaaatgattttggagaacagctcacaaaaacaattt 55660405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 562788 - 562831
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  562788 taaggaaatccctatgcaccctgcataaattcagaaatggtttt 562831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 70
Target Start/End: Complemental strand, 6842037 - 6841982
Alignment:
Q  15 tgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||| |||| |||||    
T  6842037 tgcaccctgcataaattcaaaaatggttttggagtacaacttacagaaaccatttc 6841982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 25715656 - 25715772
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt-tg-gagtacaactcacaaaaactatttctggatttatgcagggtgcataataattt 98  Q
    |||||||||||||||||||||||||||||| || ||||||||| || ||||   | |    ||||| |||||||||||||||||||||||||||  ||||    
T  25715656 taaggaaatccttatgcaccctgcataaatccaaaaatggtttctgtgagttgtatttc--aaaaccatttctggatttatgcagggtgcataaggattt 25715753  T
Q  99 acttatgcatcataaccgc 117  Q
     |||||||| |||||||||    
T  25715754 tcttatgcaccataaccgc 25715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 31762942 - 31762985
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  31762942 taaggaaatccttatgcatcctgcataaattcagaaatggtttt 31762985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 33883307 - 33883350
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  33883307 taaggaaatccttatgcaccctgtataaattcagaaatggtttt 33883350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 2124357 - 2124399
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  2124357 taaggaaatccttatgcaccctgcataaattcaaaaatggttt 2124399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 6841834 - 6841876
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  6841834 taaggaaatccttatgcaccctgcataaattcagaaatagttt 6841876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8165775 - 8165817
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  8165775 taaggaaatccttatgcaccctgcataaatccagaaatggttt 8165817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 36924297 - 36924235
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||| ||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  36924297 aaaactatttttggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 36924235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 41025078 - 41025116
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41025078 gaaatccttatgcaccctgcataaattcagaaatggttt 41025116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 53865274 - 53865232
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  53865274 taaggaaatccttatgcaccctgcataaatccagaaatggttt 53865232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 1492825 - 1492906
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||| ||||||||||||| |||| || ||||||||| |||||||||  |  | |||||||| |||||||||    
T  1492825 aatggttttggagtataactcacaaaaaccatttttgaatttatgcatggtgcataaggaaatccttatgcaccataaccgc 1492906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 44
Target Start/End: Original strand, 9967700 - 9967737
Alignment:
Q  7 aatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9967700 aatccttatgcaccctgcataaattcagaaatggtttt 9967737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 54895460 - 54895403
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  54895460 aaaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 54895403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 562836 - 562768
Alignment:
Q  55 tcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 123  Q
    |||||||||| ||||||| ||||||||||||||||||   |||| |||||||| ||||||||| |||||    
T  562836 tcacaaaaaccatttctgaatttatgcagggtgcatagggatttccttatgcaccataaccgcacccgg 562768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 9813025 - 9812969
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||| |||| |||||||||||||| ||||||||||||| |||||||| |||||||||    
T  9813025 aatgattttagagtacaactcacagaaactatttctgggtttatgcatggtgcataa 9812969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 42788706 - 42788650
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactca 57  Q
    |||||||||||||||||| |||||||||||  |||||| ||||||| ||||||||||    
T  42788706 taaggaaatccttatgcatcctgcataaatcaagaaatagttttggtgtacaactca 42788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 43375549 - 43375509
Alignment:
Q  4 ggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  43375549 ggaaatccttatgcaccctgcataaattcagaaatgatttt 43375509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 112
Target Start/End: Complemental strand, 51076977 - 51076901
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcata 112  Q
    |||| ||||||||||||| |||| ||||| |||| | ||||||||||||||||||||  |||| |||||||| ||||    
T  51076977 aatgattttggagtacaattcactaaaaccatttatagatttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 8157190 - 8157108
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgc 119  Q
    |||| ||||||||||||||||||| |||  |||||||||||||| ||  |||||||  ||||| |||||||| |||||||||||    
T  8157190 aatgattttggagtacaactcacataaatcatttctggatttattca-agtgcataggaatttccttatgcaccataaccgcgc 8157108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 36924418 - 36924489
Alignment:
Q  46 gagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||| |||||||||| |||| |||||||||||||| | |||||  |||| |||||||| |||||||||    
T  36924418 gagtacaattcacaaaaaccatttatggatttatgcaggatacataaagatttccttatgcaccataaccgc 36924489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 38010738 - 38010699
Alignment:
Q  4 ggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  38010738 ggaaatccttatgcaccctgcataaattcagaaatagttt 38010699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 22007705 - 22007747
Alignment:
Q  50 acaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||| |||||||||||||||||| |||||||||||||||||||    
T  22007705 acaattcacaaaaactatttctgaatttatgcagggtgcataa 22007747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 33871266 - 33871328
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||| | ||| ||||||||||||||||  |||| |||||||||||||||||| ||||    
T  33871266 aaaactatttttagatctatgcagggtgcataaggatttccttatgcatcataaccgcacccg 33871328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 33883471 - 33883525
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    ||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||||    
T  33883471 aaaaccatttttggatttatgcagggtgcataatgatttccttatgcaccataac 33883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 43374503 - 43374441
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| ||||||||||||||||||||| |||||  |||| |||||||| ||||||||| ||||    
T  43374503 aaaaccatttctggatttatgcagggtacataaggatttccttatgcaccataaccgcacccg 43374441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 47567952 - 47567890
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||||||||||||||||||| |||||||||  |||| ||||| || ||||||||| ||||    
T  47567952 aaaactatttctggatttatgcaaggtgcataaggattttcttattcaccataaccgcacccg 47567890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 53865120 - 53865058
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| |||||| ||||||||||| ||||||||  |||| |||||||||||||||||| ||||    
T  53865120 aaaaccatttctagatttatgcagagtgcataaagatttccttatgcatcataaccgcacccg 53865058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 54895614 - 54895572
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  54895614 taaggaaatccttatgcaccctgcataaatccaaaaatggttt 54895572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 1492728 - 1492671
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| |||||||||    
T  1492728 aaaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgc 1492671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 21995726 - 21995669
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||||    
T  21995726 aaaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataaccgc 21995669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 31763096 - 31763153
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  31763096 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 31763153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 41025137 - 41025056
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    ||||| || ||||||| ||| |||| ||||||| |||||||||||||||||||  ||||  ||||| | |||||||||||||    
T  41025137 gttttagaatacaacttacagaaaccatttctgaatttatgcagggtgcataaggatttcattatgtaccataaccgcgccc 41025056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 47568049 - 47568102
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgca 89  Q
    |||| |||||||||| ||||||||||||| ||||||| ||||||||| ||||||    
T  47568049 aatgattttggagtataactcacaaaaaccatttctgaatttatgcatggtgca 47568102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 71 - 123
Target Start/End: Original strand, 17109917 - 17109969
Alignment:
Q  71 tggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 123  Q
    ||||||||||||||||||||||  |||| |||||||| ||||||||| |||||    
T  17109917 tggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccgg 17109969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 9813139 - 9813190
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  9813139 atttctgaatttatgcagggtgcataaagatttccttatgcaccataaccgc 9813190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12722750 - 12722793
Alignment:
Q  1 taaggaaatccttatgcaccc-tgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||    
T  12722750 taaggaaatccttatgcacccttgcataaatccagaaatggttt 12722793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 33819734 - 33819687
Alignment:
Q  73 gatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 120  Q
    ||||||||||||||||||||  |||| |||||||| ||||||||||||    
T  33819734 gatttatgcagggtgcataaggatttccttatgcaccataaccgcgcc 33819687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 36309466 - 36309419
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||    
T  36309466 atttctggatttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 51076910 - 51076953
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||||||||||  | ||||||||||    
T  51076910 taaggaaatccttatgcaccctgcataaatctataaatggtttt 51076953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 562977 - 562935
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||| |||||||||||||  |||||||||||    
T  562977 taaggaaatccttatgaaccctgcataaatctagaaatggttt 562935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 12 - 70
Target Start/End: Complemental strand, 9967890 - 9967832
Alignment:
Q  12 ttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||| ||| |||| | |||||||||||||||||||||| ||||| |||| |||||    
T  9967890 ttatgcactctgtataagtccagaaatggttttggagtacaattcacagaaaccatttc 9967832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 22007749 - 22007715
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||||||||| |||||    
T  22007749 ccttatgcaccctgcataaattcagaaatagtttt 22007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36309648 - 36309606
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||| |||||||||||||||||||||||||  |||||||||||    
T  36309648 taagaaaatccttatgcaccctgcataaatctagaaatggttt 36309606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37059724 - 37059762
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatg 39  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  37059724 taaggaaatccttatgcaccttgcataaatccagaaatg 37059762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 38010498 - 38010532
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||| |||||    
T  38010498 aatggttttggagtacaactcacaaaaaccatttc 38010532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 53526483 - 53526441
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||| |||||| ||||||||||||||| ||||||||||    
T  53526483 taaggaaattcttatgtaccctgcataaattccgaaatggttt 53526441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 6768565 - 6768642
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||| ||||||||||| |||| |  ||| |||||||||||| |||||||  |||| ||||||||  ||||||||    
T  6768565 gttttggaatacaactcacagaaaccacatctagatttatgcaggatgcataaagatttccttatgcactataaccgc 6768642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 16475008 - 16475065
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||| |||||||||||||| |||||||  |||| |||||||| |||||||||    
T  16475008 aaaaccatttatggatttatgcaggatgcataaagatttccttatgcaccataaccgc 16475065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 33819704 - 33819733
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaat 30  Q
    ||||||||||||||||||||||||||||||    
T  33819704 taaggaaatccttatgcaccctgcataaat 33819733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 1729018 - 1728982
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  1729018 aaatggttttggagtacaactcacataaaccatttct 1728982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 66 - 114
Target Start/End: Original strand, 8157283 - 8157331
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    |||||| ||||||||||||||||||||  |||| |||||||| ||||||    
T  8157283 atttctagatttatgcagggtgcataaggatttccttatgcaccataac 8157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8242644 - 8242577
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||| |||||||||| |||| | ||||||||||||||| |||||   |||||||||||| |||||||||    
T  8242644 taagtaaatccttatacaccgtacataaattcagaaatagtttt-atgtacaactcacataaactattt 8242577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 29826101 - 29826065
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  29826101 aaatggttttggagtacaactcacagaaaccatttct 29826065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30779356 - 30779396
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggt 41  Q
    |||||||||||||||||||| ||||||||| || |||||||    
T  30779356 taaggaaatccttatgcaccttgcataaatccataaatggt 30779396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 38010540 - 38010576
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  38010540 aaatggttttggagtacaactcacagaaaccatttct 38010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 42788663 - 42788715
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcata 112  Q
    |||||||||||| |||||||||||| |||||||  |||| |||||||| ||||    
T  42788663 aaaactatttcttgatttatgcaggatgcataaggatttccttatgcaccata 42788715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 49137524 - 49137488
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  49137524 aaatggttttggagtacaactcacataaaccatttct 49137488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 50644349 - 50644385
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  50644349 aaatggttttggagtacaactcacagaaaccatttct 50644385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 6e-29; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 17893304 - 17893235
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17893304 taaggaaatccttatgcaccctgcataaattcagaaatagttttggagtacaactcacaaaaactatttc 17893235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 17893152 - 17893066
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| ||||||| ||||||    
T  17893152 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccacgcccg 17893066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 42134164 - 42134094
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttct 71  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||    
T  42134164 taaggaaatccttatgcaccctgcataaatccagaaatggttttagagtacaactcacataaactatttct 42134094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 45849188 - 45849102
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| ||||| ||||||||    
T  45849188 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataatcgcgcccg 45849102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31763788 - 31763857
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  31763788 taaggaaatccttatacaccctgcataaattcaaaaatggttttggagtacaactcacaaaaaccatttc 31763857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 12070641 - 12070572
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||    
T  12070641 taaggaaattcttatgcaccctgcataaattccgaaatggttttggagtacaactcacagaaaccatttc 12070572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 14229392 - 14229323
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  14229392 taaggaaatctttatgcaccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 14229323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 14389857 - 14389926
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||| |||||    
T  14389857 taaggaaatccttatgcaccctgcataaatccagaaatggttttggagtataactcacagaaaccatttc 14389926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 18928791 - 18928860
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||| |||||    
T  18928791 taaggaaatccttatgcaccctgcataaatccagaattggttttggagtacaactcacagaaaccatttc 18928860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 32595117 - 32595186
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  32595117 taaggaaattcttatgcaccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 32595186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 33157144 - 33157225
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||| |||| ||||| || |||||||||    
T  33157144 aatggttttagagtacaactcacagaaaccatttctggatttatgcagggtgcataatgatttccttatccaccataaccgc 33157225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 18928921 - 18929004
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    ||||||||||||||| ||||||||||  | |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  18928921 aatggttttggagtataactcacaaa--ccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 18929004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9041082 - 9041013
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| | |||| |||||    
T  9041082 taaggaaatccttatgcaccctgcataatttcagaaatggttttggagtacaattcatagaaaccatttc 9041013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9628630 - 9628561
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| |||| |||||    
T  9628630 taaggaaatccttatgcaccctgcataaatccagtaattgttttggagtacaactcacagaaaccatttc 9628561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11354542 - 11354473
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| |||||    
T  11354542 taagcaaatccttatgcactctgcataaattcataaatggttttggagtacaactcacagaaaccatttc 11354473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 18952487 - 18952402
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||  ||||  |||||||  ||||||||||||    
T  18952487 aatggttttggagtacaactcacataaaccatttctggatttatgtagggtgcataaggatttctttatgcacgataaccgcgccc 18952402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 33157005 - 33157073
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  33157005 taaggaaatccttatgcaccctgcataaatccagaaat-gttttggagtacaactcacagaaaccatttc 33157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 46590638 - 46590553
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||| |||| ||||||||||||||||||| ||||||||||| ||||||| ||||||| ||||| |||||||| ||||| |||||||    
T  46590638 aatgattttagagtacaactcacaaaaaccatttctggattaatgcaggatgcataagaattttcttatgcaccataatcgcgccc 46590553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 17811247 - 17811331
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 120  Q
    |||||||||||||||||||||| | |||| ||||||| |||||| ||||||||||||  |||| |||||||| ||||||||||||    
T  17811247 aatggttttggagtacaactcatagaaaccatttctgaatttatacagggtgcataaggatttccttatgcaccataaccgcgcc 17811331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 49992682 - 49992762
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    |||| ||||||| ||||||||||| |||| ||||||| ||||||||||||||||||| ||||| | |||||||||||||||    
T  49992682 aatgattttggaatacaactcacagaaaccatttctgaatttatgcagggtgcataagaattttcatatgcatcataaccg 49992762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 1395177 - 1395246
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||| |||||||||| ||||| || ||||| ||||||||||||||||||| ||||||||||    
T  1395177 taaggaaatccttttgcaccctgcttaaatccataaatgattttggagtacaactcacagaaactatttc 1395246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 1395315 - 1395396
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| |||| ||||||||||||||||||| ||||||| ||||||||| |||||||||  |||| |||||||| |||||||||    
T  1395315 aatgatttttgagtacaactcacaaaaaccatttctgaatttatgcatggtgcataaggatttccttatgcaccataaccgc 1395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 42134024 - 42133943
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| ||||| ||||||||||||| ||||||||||| |||||||||||| |||||||  |||| |||||||| |||||||||    
T  42134024 aatgattttgaagtacaactcacagaaactatttctagatttatgcaggatgcataaggatttccttatgcaccataaccgc 42133943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 45849340 - 45849271
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||| || |||| |||||||||||||||| |||||||| |||||    
T  45849340 taaggaaattcttatgcaccctgcataaatccataaatagttttggagtacaactaacaaaaaccatttc 45849271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 47693897 - 47693828
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||| |||||||||||  |||||| |||||||||||||||||||||||||||| |||| |||||    
T  47693897 taaggaaatctttatgcaccctttataaatccagaaatggttttggagtacaactcacacaaaccatttc 47693828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 12796593 - 12796649
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  12796593 aatggttttagagtacaactcacagaaaccatttctggatttatgcagggtgcataa 12796649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 41 - 116
Target Start/End: Complemental strand, 11354399 - 11354324
Alignment:
Q  41 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    |||||||||||||||||||||||| ||||||| ||||||| |||||| ||||| |||| |||||||| | ||||||    
T  11354399 ttttggagtacaactcacaaaaaccatttctgaatttatggagggtgtataatgatttccttatgcaccgtaaccg 11354324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 14229252 - 14229171
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| ||||| ||||| |||||||||||| |||| || |||||||||||||||||||  |||| |||||||| |||||||||    
T  14229252 aatgattttgtagtacgactcacaaaaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 14229171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 14390008 - 14390089
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||| |||| ||||||  |||||||||||||||||||  |  | |||||||| |||||||||    
T  14390008 aatggttttggagtacaactcacagaaaccatttctaaatttatgcagggtgcataaggaaatccttatgcaccataaccgc 14390089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 24368445 - 24368490
Alignment:
Q  18 accctgcataaattcagaaatggttttggagtacaactcacaaaaa 63  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  24368445 accctgcataaattcagaaatggttttgaagtacaactcacaaaaa 24368490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 32595160 - 32595103
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  32595160 aaaaccatttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 32595103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 121
Target Start/End: Original strand, 42134121 - 42134182
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  42134121 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcgccc 42134182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 24368580 - 24368661
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||    |||||||||  |||| |||||||| |||||||||||||    
T  24368580 aatggttttggagtacaactcacagaaaccatttctgaatttat----ggtgcataaggattttcttatgcaccataaccgcgccc 24368661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 29945250 - 29945298
Alignment:
Q  21 ctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  29945250 ctgcataaattcagaaatggttttggagtacaactcacagaaaccattt 29945298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 1395382 - 1395339
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  1395382 taaggaaatccttatgcaccatgcataaattcagaaatggtttt 1395339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 14229185 - 14229228
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  14229185 taaggaaatccttatgcaccctgcataaattcaaaaatggtttt 14229228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 29945382 - 29945466
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||||||||||||||| |||  | ||||||  |||||||||| ||||||||  |||| |||||||| ||||||||||||||    
T  29945382 aatggttttggagtacaactcagaaa--ccatttctaaatttatgcagagtgcataaggatttccttatgcaccataaccgcgcccg 29945466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10974646 - 10974688
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||||||||||||| |||||||||    
T  10974646 taaggaaatccttatgcaccctgcataaattcaaaaatggttt 10974688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 17811314 - 17811272
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  17811314 taaggaaatccttatgcaccctgtataaattcagaaatggttt 17811272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 17893085 - 17893127
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  17893085 taaggaaatccttatgcaccctgcataaatccagaaatggttt 17893127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45849121 - 45849163
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  45849121 taaggaaatccttatgcaccctgcataaatccagaaatggttt 45849163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 46590790 - 46590728
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaa 63  Q
    |||||||||| |||||||||||| ||||||  | ||||||||||| |||||||||||||||||    
T  46590790 taaggaaatctttatgcaccctgtataaatcgataaatggttttgaagtacaactcacaaaaa 46590728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 59
Target Start/End: Original strand, 6708343 - 6708388
Alignment:
Q  14 atgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||    
T  6708343 atgcaccctgcataaatgcagaaatgattttggagtacaactcaca 6708388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 14229349 - 14229406
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  14229349 aaaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgc 14229406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 17893261 - 17893318
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  17893261 aaaactatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 17893318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 31763937 - 31764018
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| ||||||| | |||| ||||||||  ||||||||||||||| |||||||||||  |||| |||||||| |||||||||    
T  31763937 aatgattttggaatgcaacccacaaaaatcatttctggatttatgtagggtgcataaggatttccttatgcaccataaccgc 31764018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 35754591 - 35754636
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggttttggagtacaact 55  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||    
T  35754591 ccttatacaccctgcataaattcataaatggttttggagtacaact 35754636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 45849297 - 45849350
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||||| |||||    
T  45849297 aaaactatttatggatttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 32595261 - 32595333
Alignment:
Q  50 acaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||| |||| |||||| |||||| |||||||||||||  |||| |||||||| ||||||| ||||||    
T  32595261 acaactcacagaaacaatttctagatttaagcagggtgcataaggatttccttatgcaccataaccacgcccg 32595333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 119
Target Start/End: Original strand, 9628587 - 9628646
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgc 119  Q
    ||||| ||| |||||||||||||||||||||||  |||| |||||||| |||||||||||    
T  9628587 aaaacaattactggatttatgcagggtgcataaggatttccttatgcaccataaccgcgc 9628646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 12070598 - 12070661
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 123  Q
    ||||| ||||| | ||||||||||||||||||| ||||| |||||||| ||||||||| |||||    
T  12070598 aaaaccatttcggaatttatgcagggtgcataagaatttccttatgcaccataaccgcacccgg 12070661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 12796436 - 12796510
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaa------atggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||| |||||| ||||||||| |||||      ||||||||||||||||||||||| |||||||||    
T  12796436 taaggaaatccttctgcaccttgcataaatccagaaatagaaatggttttggagtacaactcacagaaactattt 12796510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 19 - 58
Target Start/End: Original strand, 15588548 - 15588587
Alignment:
Q  19 ccctgcataaattcagaaatggttttggagtacaactcac 58  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  15588548 ccctgcataaattcagaaatggttttgaagtacaactcac 15588587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 32143800 - 32143741
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatgg-ttttggagtacaactcaca 59  Q
    ||||||||||||||||||| ||||||||||  |||||||| ||||||||||||| |||||    
T  32143800 taaggaaatccttatgcactctgcataaatctagaaatggtttttggagtacaattcaca 32143741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 33157042 - 33156991
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  33157042 atttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 33156991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 41 - 92
Target Start/End: Original strand, 35754737 - 35754788
Alignment:
Q  41 ttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    ||||||||||||||||||| |||| |||||||||||||||||  ||||||||    
T  35754737 ttttggagtacaactcacagaaaccatttctggatttatgcattgtgcataa 35754788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 47693746 - 47693691
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcata 91  Q
    ||||||||| || |||||||||||||||| |||| || ||||||||||||||||||    
T  47693746 aatggttttagaatacaactcacaaaaaccatttttgaatttatgcagggtgcata 47693691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 51904773 - 51904730
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttat 79  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  51904773 aatggttttggagtacaactcacataaattatttctggatttat 51904730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 18928986 - 18928944
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  18928986 taaggaaatctttatgcaccctgcataaatccagaaatggttt 18928944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 29945447 - 29945405
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||| ||||||||||| |||||||||||    
T  29945447 taaggaaatccttatgcactctgcataaatttagaaatggttt 29945405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33157211 - 33157169
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  33157211 taaggaaatcattatgcaccctgcataaatccagaaatggttt 33157169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49992531 - 49992585
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaact 55  Q
    ||||||||||||||||||| || |||||||  ||||||||||||||| |||||||    
T  49992531 taaggaaatccttatgcacacttcataaatctagaaatggttttggaatacaact 49992585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 15588635 - 15588711
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||||||||||| ||||| |||| |||| || |||||||||| ||||||||  |||| |||||||| |||||    
T  15588635 aatggttttggagtacaagtcacagaaaccatttatgaatttatgcagagtgcataa-gatttccttatgcaccataa 15588711  T

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Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 47693854 - 47693911
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||  |||||||||||  |||| ||||||||||||||||||    
T  47693854 aaaaccatttctggatttataaagggtgcataaagatttccttatgcatcataaccgc 47693911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 49992744 - 49992707
Alignment:
Q  6 aaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||| |||||||||||||||||||||||||||||||||    
T  49992744 aaattcttatgcaccctgcataaattcagaaatggttt 49992707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 18952596 - 18952548
Alignment:
Q  22 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||  ||||||||||||||||||||||||||| |||| |||||    
T  18952596 tgcataaatctagaaatggttttggagtacaactcacagaaaccatttc 18952548  T

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Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11354337 - 11354380
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||| |||| |||||| |||||||||||||||||||||    
T  11354337 taaggaaatcattatacaccctccataaattcagaaatggtttt 11354380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 107
Target Start/End: Complemental strand, 14389900 - 14389853
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgca 107  Q
    ||||| |||||||||||||||||||||||||||  |||| ||||||||    
T  14389900 aaaaccatttctggatttatgcagggtgcataaggatttccttatgca 14389853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 31764004 - 31763961
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||||||| ||||||| |||||||| ||||    
T  31764004 taaggaaatccttatgcaccctacataaatccagaaatgatttt 31763961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 32143755 - 32143814
Alignment:
Q  58 caaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||| |||||| ||||||||||| ||||||||  |||| |||||||| |||||||||    
T  32143755 caaaaaccatttctagatttatgcagagtgcataaggatttccttatgcaccataaccgc 32143814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 55 - 117
Target Start/End: Complemental strand, 10974694 - 10974632
Alignment:
Q  55 tcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||| |||| || |||||||||||||||||||  |||| |||||||| |||||||||    
T  10974694 tcacagaaaccatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 10974632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 12796475 - 12796417
Alignment:
Q  64 ctatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||||||||||||||| |||||| ||  |||| |||||||| ||||||||| ||||    
T  12796475 ctatttctggatttatgcaaggtgcagaaggatttccttatgcaccataaccgcacccg 12796417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 12796652 - 12796618
Alignment:
Q  9 tccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||| ||||||||||||    
T  12796652 tccttatgcaccctgcataaatccagaaatggttt 12796618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 43
Target Start/End: Complemental strand, 14390067 - 14390033
Alignment:
Q  9 tccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||| |||||||||||    
T  14390067 tccttatgcaccctgcataaatttagaaatggttt 14390033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 18952424 - 18952462
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  18952424 gaaatccttatgcaccctacataaatccagaaatggttt 18952462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 47693677 - 47693722
Alignment:
Q  1 taaggaaatccttat--gcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||  |||||||||||||||||| ||||||||||    
T  47693677 taaggaaatccttatatgcaccctgcataaattcaaaaatggtttt 47693722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 9041039 - 9041096
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||| | |||||||||||||||||  |||| |||||||| |||||||||    
T  9041039 aaaaccatttctgaaattatgcagggtgcataaggatttccttatgcaccataaccgc 9041096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 117
Target Start/End: Complemental strand, 23174446 - 23174401
Alignment:
Q  72 ggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  23174446 ggatttatgcacggtgcataagaattttcttatgcaccataaccgc 23174401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 10497900 - 10497936
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  10497900 aaatggttttggagtacaactcacagaaaccatttct 10497936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 12070501 - 12070453
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagg 84  Q
    ||||||||||||||||||||||||||||  |||| |  |||||||||||    
T  12070501 aatggttttggagtacaactcacaaaaatcatttataaatttatgcagg 12070453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 20506705 - 20506669
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  20506705 aaatggttttggagtacaactcacataaaccatttct 20506669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 21256236 - 21256200
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  21256236 aaatggttttggagtacaactcacagaaaccatttct 21256200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 23277363 - 23277327
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  23277363 aaatggttttggagtacaactcacagaaaccatttct 23277327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 23921334 - 23921298
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  23921334 aaatggttttggagtacaactcacagaaaccatttct 23921298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 31084048 - 31084084
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  31084048 aaatggttttggagtacaactcacagaaaccatttct 31084084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 35197650 - 35197618
Alignment:
Q  38 tggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||| |||||    
T  35197650 tggttttggagtacaactcacaaaaaccatttc 35197618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 37642765 - 37642801
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  37642765 aaatggttttggagtacaactcacagaaaccatttct 37642801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 1e-26; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 44426763 - 44426848
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||||    
T  44426763 aatggttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccc 44426848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 5728697 - 5728762
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  5728697 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacagaaaccatttc 5728762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 5728844 - 5728925
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  5728844 aatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataagaattttcttatgcaccataaccgc 5728925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 26945745 - 26945676
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||    
T  26945745 taaggaaatccttatgcaccctgcataaatccagaaatagttttggagtacaactcacagaaactatttc 26945676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44426611 - 44426680
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  44426611 taaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcacataaaccatttc 44426680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 7843746 - 7843682
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  7843746 gaaatccttatgcaacctgcataaattcagaaatggttttggagtacaactcacagaaattattt 7843682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 34227907 - 34227839
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||    
T  34227907 taaggaaattcttatgcaccctgcataaattcataaatggttttggagtacaactcacacaaaccattt 34227839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 46004566 - 46004503
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaac 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||    
T  46004566 taaggaaatccttatgcaccctgcataaattcagaaatggttttgaagtacaacacacagaaac 46004503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 46004421 - 46004335
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||  ||||  ||||||| |||||| |||||||    
T  46004421 aatggttttggagtacaactcacagaaaccatttctggatttatgcagagtgcataaggatttcgttatgcaccataactgcgcccg 46004335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 26945594 - 26945513
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| |||||||| || |||| |||||||||| |||||||||||||||| ||||| |||||||| |||||||||    
T  26945594 aatggttttggaatacaactcgcagaaacaatttctggatatatgcagggtgcataagaatttccttatgcaccataaccgc 26945513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 32604801 - 32604724
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  |||| |||||||| |||||    
T  32604801 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataaagattttcttatgcaccataa 32604724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 34227756 - 34227671
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||| ||||||| ||||| |||||||||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  34227756 aatgtttttggaatacaattcacaaaaaccatttctggatttatgcaggttgcataaggatttccttatgcaccataaccgcgccc 34227671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 41065848 - 41065763
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| ||||||  ||||||||||| |||||||  |||| |||||||| |||||||||||||    
T  41065848 aatggttttggagtacaactcacagaaaccatttctaaatttatgcaggatgcataaagattttcttatgcaccataaccgcgccc 41065763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 41066000 - 41065931
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||| |||| |||||    
T  41066000 taaggaaatccttatgtaccctgcataaatttagaaatggttttcgagtacaactcacagaaaccatttc 41065931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 43742262 - 43742331
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||||||||||||||||| |||| |||||    
T  43742262 taaggaaatccttatgcatcctgcataaatccagaaatgattttggagtacaactcacagaaaccatttc 43742331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 5728640 - 5728694
Alignment:
Q  3 aggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactca 57  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  5728640 aggaaatccttatgcaccttgcataaatccagaaatggttttggagtacaactca 5728694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 7843599 - 7843518
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||  |||| ||||  || |||||||||    
T  7843599 aatggttttggagtacaactcacataaaccatttctggatttatgcagcgtgcataaggattttcttagacaccataaccgc 7843518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 97
Target Start/End: Original strand, 31365434 - 31365495
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatt 97  Q
    |||||||||||||||||||||||| |||| |||| |||||||||||||||||||||| ||||    
T  31365434 aatggttttggagtacaactcacagaaaccatttatggatttatgcagggtgcataagaatt 31365495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 113
Target Start/End: Complemental strand, 38837620 - 38837543
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  |||| | |||||| |||||    
T  38837620 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataaggatttccgtatgcaccataa 38837543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 31192582 - 31192518
Alignment:
Q  6 aaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| |||| |||||    
T  31192582 aaatccttatgcatcctgcataaatccagaaatggttttggagtacaattcacagaaaccatttc 31192518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45478327 - 45478395
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||| |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||| |||| ||||    
T  45478327 taagaaaatccttatacacgctgcataaattcagaaatggttttgaagtacaactcacagaaaccattt 45478395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 6620762 - 6620846
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| |||| ||||| || ||||||| |||||  |||| |||||||| |||||||||||||    
T  6620762 aatggttttggagtacaactcacagaaaccatttgtggatgtacgcagggt-cataaggatttccttatgcaccataaccgcgccc 6620846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 26945702 - 26945759
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  26945702 aaaactatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 26945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31365284 - 31365353
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||| | ||||||||| || ||||||||||||||||||| ||||| |||| |||||    
T  31365284 taaggaaatccttatgcatcttgcataaatccataaatggttttggagtacaagtcacataaaccatttc 31365353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 38837760 - 38837691
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||| ||||||||| || |||||||||||||||| || ||||| |||| |||||    
T  38837760 taaggaaatccttatgcaccttgcataaatccaaaaatggttttggagtataattcacagaaaccatttc 38837691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 45478482 - 45478563
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||| | |||||||||||||||| ||| ||||||||||||| | |||||||  |||| |||||||| |||||||||||||    
T  45478482 gttttgcaatacaactcacaaaaacaattactggatttatgcaagatgcataaggattttcttatgcaccataaccgcgccc 45478563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 38837556 - 38837595
Alignment:
Q  4 ggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38837556 ggaaatccttatgcaccctgcataaattcagaaatggttt 38837595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 44426654 - 44426592
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  44426654 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 44426592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7845128 - 7845083
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttgg 46  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||    
T  7845128 taaggaaatccttatgcaacctgcataaatttagaaatggttttgg 7845083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 6846659 - 6846603
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||||  ||||||||    
T  6846659 aatggttttggagtacaactcacagaaaccatttctgaatttatgcaaagtgcataa 6846603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 34227689 - 34227732
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||| ||||||||||| |||||||||||||    
T  34227689 taaggaaatccttatgcaacctgcataaatccagaaatggtttt 34227732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32604734 - 32604776
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||| ||||| ||||||||||||||||||||||||||||||||    
T  32604734 taagaaaatctttatgcaccctgcataaattcagaaatggttt 32604776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 44140554 - 44140520
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||||||||    
T  44140554 aatggttttggagtacaactcacaaaaactatttc 44140520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44426830 - 44426788
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  44426830 taaggaaatctttatgcaccctgcataaatccagaaatggttt 44426788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 6620636 - 6620701
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||  ||||||||| || |||||||||||| ||||||| |||| |||| |||||    
T  6620636 gaaatccttatgcactatgcataaatccataaatggttttggggtacaacacacagaaaccatttc 6620701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 34227864 - 34227921
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||| || ||||||||||||||||||| ||||| |||||||| |||||||||    
T  34227864 aaaaccatttatgaatttatgcagggtgcataagaatttccttatgcaccataaccgc 34227921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 46004523 - 46004580
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  46004523 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 46004580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 43742299 - 43742248
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  43742299 atttctggatttatgcaggatgcataaggatttccttatgcaccataaccgc 43742248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 924510 - 924552
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||| |||| |||| ||||||||||||||||||||||    
T  924510 taaggaaatctttatacaccttgcataaattcagaaatggttt 924552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 5728911 - 5728869
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||| |||| |||||||||||||||||||| ||||||||||||    
T  5728911 taagaaaattcttatgcaccctgcataaatccagaaatggttt 5728869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7843532 - 7843574
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||| |||||||||||||| |||||||||| ||||||||||||    
T  7843532 taagaaaatccttatgcacgctgcataaatccagaaatggttt 7843574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 32091312 - 32091346
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||| ||||||||||    
T  32091312 aatggttttggagtacaactcacagaaactatttc 32091346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 46004358 - 46004396
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||| |||||||||| ||||||||||||    
T  46004358 gaaatccttatgcactctgcataaatccagaaatggttt 46004396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 48830380 - 48830414
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||| ||||||||||    
T  48830380 aatggttttggagtacaactcacagaaactatttc 48830414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 38837717 - 38837774
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||| |||||||||||| |||||||||  |||| |||||||| |||||||||    
T  38837717 aaaaccatttttggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 38837774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 24360412 - 24360448
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  24360412 aaatggttttggagtacaactcacagaaaccatttct 24360448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 25779363 - 25779399
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  25779363 aaatggttttggagtacaactcacagaaaccatttct 25779399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 48830246 - 48830282
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  48830246 aaatggttttggagtacaactcacagaaaccatttct 48830282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 39086530 - 39086599
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39086530 taagaaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaaccatttc 39086599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 23155538 - 23155606
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  23155538 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacagaaaccattt 23155606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 123
Target Start/End: Original strand, 35662197 - 35662284
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 123  Q
    |||||||||||||||||||||||| |||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||||||||||    
T  35662197 aatggttttggagtacaactcacagaaaccatttatggatttatgcagggtgcataagtatttccttatgcaccataaccgcgcccgg 35662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 15559062 - 15559183
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttac 100  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| | |||||| |||| |||  |||||| |||||||||||| ||||||   |||| |    
T  15559062 taaggaaatccttatgcaccatgcataaattcagaaatgattttgaaatacaacccacataaatcatttctagatttatgcaggatgcatacggatttcc 15559161  T
Q  101 ttatgcatcataaccgcgcccg 122  Q
    ||||||| |||||| |||||||    
T  15559162 ttatgcaccataacagcgcccg 15559183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 32 - 119
Target Start/End: Original strand, 42746803 - 42746890
Alignment:
Q  32 cagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgc 119  Q
    |||| ||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  |||| ||||| ||||||||||||||    
T  42746803 cagacatggttttggagtacaactcacataaaccatttctgaatttatgcagggtgcataaagatttccttatacatcataaccgcgc 42746890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 39861811 - 39861753
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39861811 taaggaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcaca 39861753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 113
Target Start/End: Original strand, 5630235 - 5630312
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||| || ||||| |||||    
T  5630235 aatggttttggagtacaactcacagaaactatttctggatttatgcagggtgcataaggatttcctcatgcaccataa 5630312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 11660873 - 11660792
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| |||||||||||  |||| |||||||| |||||||||    
T  11660873 aatggttttggagtacaactcacaaaaaccatttctgaatttatgtagggtgcataaggatttccttatgcaccataaccgc 11660792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11661013 - 11660944
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| |||| |||||    
T  11661013 taaggaaatccttatgcaccctgcataaatccagaaatggttttggaatacaactcacagaaaccatttc 11660944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 22695504 - 22695585
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||  |||| |||||||| |||||||||    
T  22695504 aatggttttggaatacaactcacagaaactatttctggatttatgcaaggtgcataaggatttccttatgcaccataaccgc 22695585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 22830752 - 22830837
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||  |||| |||||||| |||||| ||||||    
T  22830752 aatggttttggagtacaactcacagaaaccatttctggatttatgcagtgtgcataaggatttccttatgcaccataactgcgccc 22830837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 42746532 - 42746601
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||| | ||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  42746532 taaggaaatccttatgaatcctgcataaatccagaaatggttttggagtacaactcacataaactatttc 42746601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3340603 - 3340657
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaact 55  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3340603 taaggaaatccttatgcaccctgcataaatttagaaatggttttggagtacaact 3340657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 16552327 - 16552241
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||   |||| |||||||| ||||||||| ||||    
T  16552327 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcatacggatttccttatgcaccataaccgcacccg 16552241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20134430 - 20134372
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  20134430 taaggaaatccttatgcactctgcataaatccagaaatggttttggagtacaactcaca 20134372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35662080 - 35662138
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  35662080 taaggaaatccttatgcaccctacataaatccagaaatggttttggagtacaactcaca 35662138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 7286766 - 7286835
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| |||| |||||    
T  7286766 taaggaaatctttatgcaccctgcataaattcagaaatgattttggagtacaacacacagaaaccatttc 7286835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 39166371 - 39166302
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |||||    
T  39166371 taagaaaatccttatgcaccctgcataaatttagaaatggttttggagtataactcacagaaaccatttc 39166302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 22671962 - 22672041
Alignment:
Q  37 atggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    ||||||||||||||||||||| |||||  ||||||||||||||||||| |||||||  |||| |||||||| ||||||||    
T  22671962 atggttttggagtacaactcataaaaatcatttctggatttatgcaggatgcataaggatttccttatgcaccataaccg 22672041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 39166231 - 39166160
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgca 107  Q
    ||||||||||||||||| |||||| |||  ||||||||||||||||||||||||||| ||||| ||||||||    
T  39166231 aatggttttggagtacagctcacagaaatcatttctggatttatgcagggtgcataagaatttccttatgca 39166160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 15059597 - 15059679
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa-taatttacttatgcatcataaccgc 117  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||   |||| |||||||| |||||||||    
T  15059597 aatggttttggaatacaactcacagaaaccatttctggatttatgcagggtgcataagggatttccttatgcaccataaccgc 15059679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 20134279 - 20134198
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| ||||||| ||||||||||| |||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  20134279 aatgattttggaatacaactcacagaaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataaccgc 20134198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 36864080 - 36864149
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| ||||||||| ||||||||||  ||||||||||||||| ||||||||||| ||||||||||    
T  36864080 taaggaaattcttatgcacactgcataaatctagaaatggttttggaatacaactcacagaaactatttc 36864149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 36 - 120
Target Start/End: Original strand, 7286918 - 7287001
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcc 120  Q
    |||||||||| ||||||||||||| |||| ||||| |||||||||||||||||||||  | || |||||||| ||||||||||||    
T  7286918 aatggttttgaagtacaactcacagaaaccatttccggatttatgcagggtgcataagga-ttccttatgcaccataaccgcgcc 7287001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 11376606 - 11376543
Alignment:
Q  7 aatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||| ||||||||||||||||||| |||||||| |||||||||| |||| |||||    
T  11376606 aatccttatgcacactgcataaattcagaaatgattttggagaacaactcacagaaaccatttc 11376543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 703810 - 703732
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    |||| |||||||||||||||||||||||| ||||||  ||||||||||| |||||||  |||| |||||||| ||||||    
T  703810 aatgattttggagtacaactcacaaaaaccatttctaaatttatgcaggatgcataaggatttccttatgcaccataac 703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 36864232 - 36864317
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||| ||||||||||||||||||| |||  ||||||| |||||||||| ||||||||  |||| ||||| || |||||||||||||    
T  36864232 aatgattttggagtacaactcacataaatcatttctgaatttatgcagagtgcataaggatttccttatacaccataaccgcgccc 36864317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 5411787 - 5411719
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||| |||||||||||| |||||||||||||||| |||||| ||| |||||||| ||| |||||    
T  5411787 taaggaaattcttatgcacccttcataaattcagaaatgattttggggtataactcacagaaattattt 5411719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 15059467 - 15059515
Alignment:
Q  22 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  15059467 tgcataaatccagaaatggttttggagtacaactcacagaaactatttc 15059515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 33857434 - 33857378
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||||||||||||||||||||||| |||| |||| |||||||||| |||||||||||    
T  33857434 aatggttttggagtacaactcacataaaccatttttggatttatgaagggtgcataa 33857378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 36 - 116
Target Start/End: Complemental strand, 39861659 - 39861579
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    |||||||||| | ||||||||||  |||| |||||||||||||||||||||||||||  |||| |||||||  ||||||||    
T  39861659 aatggttttgaaatacaactcaccgaaaccatttctggatttatgcagggtgcataaggatttccttatgccccataaccg 39861579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 11660806 - 11660849
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  11660806 taaggaaatccttatgcaccctacataaattcagaaatggtttt 11660849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 16552260 - 16552302
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  16552260 taaggaaatccgtatgcaccctgcataaattcagaaatggttt 16552302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20696358 - 20696300
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    ||||||||||||||| |||||||||||||| || |||||| |||||||||||| |||||    
T  20696358 taaggaaatccttattcaccctgcataaatccataaatggatttggagtacaattcaca 20696300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 23155807 - 23155885
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    |||||||||||||||||||||| | |||| |||| |||||||||||| |||||||||  ||||  ||||||| ||||||    
T  23155807 aatggttttggagtacaactcatagaaacaatttttggatttatgcaaggtgcataaggatttcattatgcaccataac 23155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39861592 - 39861634
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  39861592 taaggaaatccttatgcaccctgcataaatccagaaatggttt 39861634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 39861768 - 39861830
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  39861768 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 39861830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42746874 - 42746832
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  42746874 taaggaaatctttatgcaccctgcataaattcagaaatggttt 42746832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 703949 - 703880
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||| | ||||||||||||  | |||| |||||||| |||||||||||||||| |||||    
T  703949 taaggaaatccttataccccctgcataaatctaaaaatagttttggaatacaactcacaaaaaccatttc 703880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 11660970 - 11661026
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| ||||||||    
T  11660970 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccg 11661026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 703743 - 703786
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||| |||||||||||| ||||||||||||    
T  703743 taaggaaatccttatgcatcctgcataaatttagaaatggtttt 703786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20134212 - 20134254
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  20134212 taaggaaatccttatgcagcctgcataaatccagaaatggttt 20134254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 20134387 - 20134449
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| |||||||||||||||||| ||||||||  |||| |||||||| ||||||||| ||||    
T  20134387 aaaaccatttctggatttatgcagagtgcataaggatttccttatgcaccataaccgcacccg 20134449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22830819 - 22830777
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||| |||||||||| ||||||||||||    
T  22830819 taaggaaatccttatgcacactgcataaatccagaaatggttt 22830777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 25671319 - 25671277
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  25671319 taaggaaatccttatgtaccatgcataaattcagaaatggttt 25671277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 36864299 - 36864261
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatg 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  36864299 taaggaaatccttatgcactctgcataaattcagaaatg 36864261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 114
Target Start/End: Original strand, 39086670 - 39086748
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    ||||||||||||||||| |||||| |||| |||||| ||||||| ||  ||||||||  |||| |||||||| ||||||    
T  39086670 aatggttttggagtacagctcacagaaaccatttctagatttatacatagtgcataaggatttccttatgcaccataac 39086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 3340743 - 3340824
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||| |||||||| |||| |||| ||||||||| ||  ||||||||  |||| |||| ||| |||||||||    
T  3340743 aatggttttggagtataactcacagaaaccatttatggatttatacatagtgcataaggatttccttacgcaccataaccgc 3340824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 35662123 - 35662066
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||| |||||||||||  |||| |||||||| |||||||||    
T  35662123 aaaaccatttctggatttatgtagggtgcataaggatttccttatgcaccataaccgc 35662066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 36864123 - 36864066
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||||||||    
T  36864123 aaaaccatttctagatttatgcagtgtgcataagaatttccttatgcaccataaccgc 36864066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 39086573 - 39086516
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  39086573 aaaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataaccgc 39086516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 5411750 - 5411806
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||| ||||||| ||||||||||| ||||| |||||||| ||||||||| ||||    
T  5411750 atttctgaatttatgaagggtgcataagaatttccttatgcaccataaccgcacccg 5411806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 5630300 - 5630260
Alignment:
Q  3 aggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||| ||||||| ||||    
T  5630300 aggaaatccttatgcaccctgcataaatccagaaatagttt 5630260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 20696204 - 20696152
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||||| ||||||||||||| |||| ||||||||||||||| ||||| |||||    
T  20696204 gttttgaagtacaactcacagaaaccatttctggatttatgtagggtacataa 20696152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15059665 - 15059622
Alignment:
Q  1 taaggaaatcc-ttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||    
T  15059665 taaggaaatcccttatgcaccctgcataaatccagaaatggttt 15059622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 22672028 - 22671985
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||    
T  22672028 taaggaaatccttatgcatcctgcataaatccagaaatgatttt 22671985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 115
Target Start/End: Complemental strand, 23155581 - 23155526
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 115  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||    
T  23155581 aaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataacc 23155526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 33857552 - 33857505
Alignment:
Q  23 gcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||| ||||||||||||| ||||| |||| |||||    
T  33857552 gcataaattcagaaatgattttggagtacaattcacagaaaccatttc 33857505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22695571 - 22695529
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||    
T  22695571 taaggaaatccttatgcaccttgcataaatccagaaatagttt 22695529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 25671111 - 25671173
Alignment:
Q  9 tccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttct 71  Q
    |||||||||||||||||||||| || ||||| ||||| | ||||||||| | |||| ||||||    
T  25671111 tccttatgcaccctgcataaatccataaatgattttgaaatacaactcatagaaaccatttct 25671173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 35662264 - 35662222
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||| |||||||||||||||||||| || |||||||||    
T  35662264 taaggaaatacttatgcaccctgcataaatccataaatggttt 35662222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39166164 - 39166202
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatg 39  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  39166164 taaggaaattcttatgcaccctgcataaatccagaaatg 39166202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 39166328 - 39166390
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| ||||||  |||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  39166328 aaaaccatttctaaatttatgcagggtgcataaggattttcttatgcaccataaccgcacccg 39166390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 32 - 70
Target Start/End: Original strand, 42746683 - 42746721
Alignment:
Q  32 cagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  42746683 cagacatggttttggagtacaactcacataaactatttc 42746721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 3340646 - 3340589
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||  |||||||||||||||||||  |||| |||||||| |||||||||    
T  3340646 aaaaccatttctaaatttatgcagggtgcataaggatttccttatgcaccataaccgc 3340589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 20696142 - 20696183
Alignment:
Q  2 aaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||    
T  20696142 aaggaaatccttatgtaccctacataaatccagaaatggttt 20696183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 64
Target Start/End: Original strand, 33868793 - 33868822
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaac 64  Q
    ||||||||||||||||||||||||||||||    
T  33868793 aaatggttttggagtacaactcacaaaaac 33868822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 42746575 - 42746518
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||||| | |||||  |||| |||||||| |||||||||    
T  42746575 aaaaccatttctggatttatgcaggattcataaggatttccttatgcaccataaccgc 42746518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 7 - 43
Target Start/End: Complemental strand, 7286979 - 7286943
Alignment:
Q  7 aatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||| | ||||||||||    
T  7286979 aatccttatgcaccctgcataaatccggaaatggttt 7286943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 70
Target Start/End: Original strand, 8949471 - 8949503
Alignment:
Q  38 tggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||| |||||    
T  8949471 tggttttggagtacaactcacaaaaaccatttc 8949503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 8949511 - 8949547
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  8949511 aaatggttttggagtacaactcacagaaaccatttct 8949547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 11376461 - 11376405
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||| ||||| ||||||||||||| |||| ||||||  ||||||||||| |||||||    
T  11376461 aatgattttgaagtacaactcacagaaaccatttctaaatttatgcaggatgcataa 11376405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Complemental strand, 16668237 - 16668201
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  16668237 aaatggttttggagtacaactcacagaaaccatttct 16668201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 16668277 - 16668245
Alignment:
Q  38 tggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||| |||||    
T  16668277 tggttttggagtacaactcacaaaaaccatttc 16668245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 115
Target Start/End: Original strand, 30783586 - 30783630
Alignment:
Q  71 tggatttatgcagggtgcataataatttacttatgcatcataacc 115  Q
    |||||||||||| |||||||||  |||| ||||||||||||||||    
T  30783586 tggatttatgcacggtgcataaggatttccttatgcatcataacc 30783630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 36 - 122
Target Start/End: Original strand, 16111668 - 16111755
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactattt-ctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||| |||||||| ||||||||||||||    
T  16111668 aatggttttggagtacaactcacaaaaaccattttctggatttatgcagggtgcataaagatttccttatgcaccataaccgcgcccg 16111755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 30777375 - 30777289
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||  ||||  ||||||| ||||||||||||||    
T  30777375 aatggttttggagtacaactcacataaaccatttctggatttatgcagggtgcataaggatttttttatgcaccataaccgcgcccg 30777289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 19246675 - 19246744
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  19246675 taaggaaatccttatgcaccctgcataaattcagaaattgttttggagtacaactcacagaaaccatttc 19246744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 15253047 - 15252983
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  15253047 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaacttacaaaaaccattt 15252983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 42364505 - 42364573
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  42364505 taagaaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacagaaaccattt 42364573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 12449134 - 12449053
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||  |||| |||||||| |||||||||    
T  12449134 aatggttttggagtacaactcacaaaaaccatttctgaatttatgcagtgtgcataaggatttccttatgcaccataaccgc 12449053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 24183628 - 24183559
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |||| |||||    
T  24183628 taaggaaatccttatgcaccctgcataaattcaggaatgattttggagtacaactcacataaaccatttc 24183559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31711523 - 31711592
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  31711523 taaggaaatccttatgtaccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 31711592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 31783806 - 31783875
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| |||||    
T  31783806 taaggaaatccttatgcaccctgcataaatccagaaatggttttgaagtacaactcacagaaaccatttc 31783875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 37867167 - 37867236
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  37867167 taaggaaatccttatccaccctgcataaattcagaaatgattttggagtacaactcacagaaaccatttc 37867236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 121
Target Start/End: Original strand, 42364657 - 42364742
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||  |||| ||| |||| |||||||||||||    
T  42364657 aatggttttggagtacaactaacagaaaccatttctggatttatgcagggtgcataaggatttccttttgcaccataaccgcgccc 42364742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20661626 - 20661568
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  20661626 taaggaaatcattatgcaccctgcataaatccagaaatggttttggagtacaactcaca 20661568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 20661476 - 20661395
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| |||||||||||||||| |||| | ||||||||||||||||||||  |||| |||||||| |||||||||    
T  20661476 aatggttttggaatacaactcacaaaaaccatttatagatttatgcagggtgcataaggatttccttatgcaccataaccgc 20661395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22596535 - 22596466
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||| ||||||||||||| ||||||| ||||||| |||||||||||| ||||||||||    
T  22596535 taaggaaatccttatgtaccctgcataaatccagaaattgttttggtgtacaactcacagaaactatttc 22596466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34726827 - 34726758
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |||| |||||    
T  34726827 taaggaaattcttatgcaccctgcataaatccagaaatgattttggagtacaactcacagaaaccatttc 34726758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 31711663 - 31711742
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |  |||| |||||||| ||||||||    
T  31711663 aatggttttggagtacaactcacaaaaaccatttctgaatttatgcagggtgcatgaggattt-cttatgcaccataaccg 31711742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 22588549 - 22588491
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  22588549 taaggaaatccttatgcaccctacataaatccagaaatagttttggagtacaactcaca 22588491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 22588398 - 22588317
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||  |  | |||||||| |||||||||    
T  22588398 aatgattttggagtacaactcacaaaaaccatttctgaatttatgcagggtgcataaggaaatccttatgcaccataaccgc 22588317  T

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Target: chr2; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 37867323 - 37867404
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    ||||||||||| |||||||| |||| ||||||| |||||||||||||||||||  |||| |||||||| | |||||||||||    
T  37867323 gttttggagtataactcacagaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccgtaaccgcgccc 37867404  T

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Target: chr2; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 12449274 - 12449218
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactca 57  Q
    |||||||||| ||||||||| |||||||||| |||||||||||||||||||||||||    
T  12449274 taaggaaatctttatgcaccttgcataaatttagaaatggttttggagtacaactca 12449218  T

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Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 44915522 - 44915454
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||| |||||||||||||||||||| ||||||| |||||||||||||| ||||| |||| ||||    
T  44915522 taaggaaatgcttatgcaccctgcataaatccagaaattgttttggagtacaattcacagaaaccattt 44915454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 34726684 - 34726605
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataacc 115  Q
    |||||||||| ||||||||||| | |||| |||| ||||||||||||||||||||||  |||| |||||||| |||||||    
T  34726684 aatggttttgaagtacaactcatagaaaccatttatggatttatgcagggtgcataaggatttccttatgcaccataacc 34726605  T

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Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 20194058 - 20194000
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    ||||||||| |||||||||||| |||||||  |||||||||||||||||||||||||||    
T  20194058 taaggaaattcttatgcaccctacataaatctagaaatggttttggagtacaactcaca 20194000  T

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Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 37867386 - 37867344
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37867386 taaggaaatccttatgcaccctgcataaattcagaaatggttt 37867344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 22596384 - 22596303
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||  |||| ||||| || |||||||||    
T  22596384 aatggttttgtagtacaattcacagaaaccaattctggatttatgcagggtgcataaggatttccttatacaccataaccgc 22596303  T

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Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 25575403 - 25575322
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||| || || ||||||||||||| ||||||| ||||||||||| |||||||  |||| |||||||| |||||||||    
T  25575403 aatggttttagaatataactcacaaaaaccatttctgaatttatgcaggatgcataaggatttccttatgcaccataaccgc 25575322  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 44915371 - 44915290
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||| |||  ||||||  ||||||||||| |||||||  |||| |||||||| |||||||||    
T  44915371 aatggttttggagtacaactcacataaatcatttctaaatttatgcaggctgcataaagatttccttatgcaccataaccgc 44915290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 15252908 - 15252848
Alignment:
Q  47 agtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgca 107  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||  |||| ||||||||    
T  15252908 agtacaactcacataaaccatttctggatttatgcagggtgcataaggatttccttatgca 15252848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 16111526 - 16111594
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||| |||| ||||||||||||||||||||| | |||| |||||||||||||||||||| |||| ||||    
T  16111526 taagaaaattcttatgcaccctgcataaatttaaaaatagttttggagtacaactcacagaaaccattt 16111594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 20661583 - 20661639
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccg 116  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||| ||||||||    
T  20661583 aaaaccatttctggatttatgcagggtgcataatgatttccttatgcaccataaccg 20661639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 12449067 - 12449110
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  12449067 taaggaaatccttatgcacactgcataaattcagaaatggtttt 12449110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 25575336 - 25575379
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  25575336 taaggaaatccttatgcatcctgcataaattcagaaatggtttt 25575379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 34726790 - 34726841
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  34726790 atttctggatttatgcagggtgcataagaatttccttatgcaccataaccgc 34726841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15252852 - 15252894
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  15252852 taaggaaatccttatgcaccctgcataaatccagaaatggttt 15252894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 31783849 - 31783792
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  31783849 aaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 31783792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 43
Target Start/End: Complemental strand, 42364723 - 42364682
Alignment:
Q  2 aaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  42364723 aaggaaatccttatgcaccctgcataaatccagaaatggttt 42364682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 44915479 - 44915536
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  44915479 aaaacaatttctggatttatgcagggtgcataagcatttccttatgcaccataaccgc 44915536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 70
Target Start/End: Complemental strand, 3147300 - 3147248
Alignment:
Q  18 accctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||| ||||||||||||||| |||||||||||||||||||| |||| |||||    
T  3147300 accctccataaattcagaaatagttttggagtacaactcacataaaccatttc 3147248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 59
Target Start/End: Complemental strand, 35126706 - 35126666
Alignment:
Q  19 ccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  35126706 ccctgcataaatccagaaatggttttggagtacaactcaca 35126666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 1095377 - 1095330
Alignment:
Q  23 gcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||    
T  1095377 gcataagttcagaaatggttttggagtacaactcacagaaaccatttc 1095330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 9 - 44
Target Start/End: Original strand, 22588339 - 22588374
Alignment:
Q  9 tccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||||||||||||||||    
T  22588339 tccttatgcaccctgcataaattcagaaatggtttt 22588374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 31711726 - 31711687
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31711726 gaaatcctcatgcaccctgcataaattcagaaatggtttt 31711687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 60 - 123
Target Start/End: Complemental strand, 42364548 - 42364485
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccgg 123  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| ||||||||| |||||    
T  42364548 aaaaccatttctgaatttatgcagggtgcataaggattttcttatgcaccataaccgcacccgg 42364485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 20194015 - 20194077
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| |||||| |||||||| ||||||||||| ||||| |||||||| ||||||||| ||||    
T  20194015 aaaaccatttctagatttatgtagggtgcataagaatttccttatgcaccataaccgcacccg 20194077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 22588506 - 22588560
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    ||||||||||||||||||||| |||||||||||  |||| |||| ||||||||||    
T  22588506 aaaactatttctggatttatgtagggtgcataaggatttccttacgcatcataac 22588560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 22596317 - 22596359
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  22596317 taaggaaatccttatgcaccctgcataaatccagaattggttt 22596359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 31783946 - 31784030
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcag---ggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||  ||||||||||||| |||| ||||||| ||||||||||   |||||||||  |||| |||||||| |||||||||    
T  31783946 aatggttttttagtacaactcacagaaaccatttctgaatttatgcagggtggtgcataaggatttccttatgcaccataaccgc 31784030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34726617 - 34726659
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  34726617 taaggaaatccttatgcaccctgcataaatccataaatggttt 34726659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 22596492 - 22596549
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||||||| |||||  |||| |||||||| |||||||||    
T  22596492 aaaacaatttctggatttatgcagggtacataaggatttccttatgcaccataaccgc 22596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 43
Target Start/End: Original strand, 30777313 - 30777350
Alignment:
Q  6 aaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  30777313 aaatccttatgcaccctgcataaatccagaaatggttt 30777350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 31711566 - 31711509
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||||||| |||||  |||| |||||||| |||||||||    
T  31711566 aaaaccatttctggatttatgcagggtacataaggatttccttatgcaccataaccgc 31711509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 1095259 - 1095203
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||||||||| | |||||||||||||||  ||||||  |||||||||||||||||||    
T  1095259 aatggttttgaaatacaactcacaaaaatcatttctaaatttatgcagggtgcataa 1095203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 80
Target Start/End: Complemental strand, 24183477 - 24183433
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatg 80  Q
    |||||||||||| ||||||||||| |||| |||||||||||||||    
T  24183477 aatggttttggaatacaactcacataaaccatttctggatttatg 24183433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 15150269 - 15150336
Alignment:
Q  50 acaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||| ||||  |||||| ||||||||||| |||||||  |||| |||||||| |||||||||    
T  15150269 acaactcacagaaaccttttctgaatttatgcaggatgcataaggattttcttatgcaccataaccgc 15150336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 20661409 - 20661452
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||||||||||  | ||||||||||    
T  20661409 taaggaaatccttatgcaccctgcataaatctataaatggtttt 20661452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Complemental strand, 30777535 - 30777488
Alignment:
Q  23 gcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||| || ||||||||||||||||||||||||| |||| |||||    
T  30777535 gcataaatccataaatggttttggagtacaactcacagaaaccatttc 30777488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31784016 - 31783971
Alignment:
Q  1 taaggaaatccttatgcacc---ctgcataaattcagaaatggttt 43  Q
    ||||||||||||||||||||   |||||||||||||||||||||||    
T  31784016 taaggaaatccttatgcaccaccctgcataaattcagaaatggttt 31783971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15150322 - 15150280
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||| ||||||||||||| |||||||||||||||||| |||||    
T  15150322 taagaaaatccttatgcatcctgcataaattcagaaaaggttt 15150280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 19246718 - 19246664
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    ||||| ||||||| |||||||||||||||||||  |||| |||||||| ||||||    
T  19246718 aaaacaatttctgaatttatgcagggtgcataaggatttccttatgcaccataac 19246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 36636206 - 36636172
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||| |||||    
T  36636206 aatggttttggagtacaactcacaaaaaccatttc 36636172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 16111569 - 16111516
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||| |  ||||||||||||||||||| ||||| |||||||| |||||    
T  16111569 aaaactatttttaaatttatgcagggtgcataagaattttcttatgcaccataa 16111516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 20570929 - 20570982
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgca 89  Q
    |||||||||| ||||||||| ||| |||| |||| | |||||||||||||||||    
T  20570929 aatggttttgaagtacaacttacagaaaccatttttagatttatgcagggtgca 20570982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 16111736 - 16111700
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaa 37  Q
    |||||||||| ||||||||||||||||||| ||||||    
T  16111736 taaggaaatctttatgcaccctgcataaatccagaaa 16111700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 43823329 - 43823365
Alignment:
Q  35 aaatggttttggagtacaactcacaaaaactatttct 71  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  43823329 aaatggttttggagtacaactcacataaaccatttct 43823365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 58; Significance: 3e-24; HSPs: 3)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20151 - 20082
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  20151 taaggaaatccttatgcaccctgcataaattcagaaatggtgttggagtacaactcacagaaacaatttc 20082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 20000 - 19954
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgca 82  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||||    
T  20000 aatggtttttgagtacaactcacagaaaccatttctggatttatgca 19954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 20114 - 20170
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||||| |||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  20114 atttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 20170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 10588984 - 10588915
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||    
T  10588984 taaggaaatccttatgcaccctgcataaattcaaaaatagttttggagtacaactcacagaaactatttc 10588915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 25119186 - 25119105
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||| ||||| |||||||| |||||||||    
T  25119186 aatggttttggagtacaactcacagaaaccatttctgaatttatgcagggtgcataagaatttccttatgcaccataaccgc 25119105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 20522879 - 20522810
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||| |||||    
T  20522879 taaggaaatccttatgcaccctacataaattcagaaatggttttggagtacaactcatagaaaccatttc 20522810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 21384869 - 21384788
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||||||| ||||||| ||||| |||||||| |||||||||    
T  21384869 aatggttttggaatacaactcacagaaaccatttctggatttatgcaggatgcataagaatttccttatgcaccataaccgc 21384788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 22857568 - 22857487
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||  |||| |||||||| |||||||||    
T  22857568 aatggttttgaagtacaactcacaaaaaccatttctgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 22857487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 22857708 - 22857639
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||    
T  22857708 taagaaaatccttatgcaccctgcataaatccagaaatggttttggagtacaactcacagaaaccatttc 22857639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 21385020 - 21384952
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||| ||||    
T  21385020 taaggaaatccttatgcaccctgcataaatctagaaatggttttggagtacaactcacagaaaccattt 21384952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 11140486 - 11140418
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||| ||||||    
T  11140486 taaggaaatccttatgcacc-tacataaattcagaaatggttttggagtacaactcacagaaattatttc 11140418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 14237858 - 14237773
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||| ||||||||||||||||||| |||| ||||||||||||||| |||||||||||  |||| |||||||| ||||||| |||||    
T  14237858 aatgattttggagtacaactcacataaacaatttctggatttatgtagggtgcataaggatttccttatgcaccataacctcgccc 14237773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 25119501 - 25119433
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||| |||| ||||    
T  25119501 taaggaaatccttatgcagcctgcataaatccagaaatggttttggagtacaactgacagaaaccattt 25119433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7371129 - 7371059
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttct 71  Q
    |||| ||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| |||| ||||||    
T  7371129 taagaaaatctttatgcaccctgcttaaatccagaaatggttttggagtacaactcacagaaaccatttct 7371059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 19284384 - 19284446
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaa 63  Q
    ||||||||||||||||||||||||||||||  | ||||||||||||||||||||||| |||||    
T  19284384 taaggaaatccttatgcaccctgcataaatctaaaaatggttttggagtacaactcataaaaa 19284446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 10698653 - 10698572
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||| ||||||||| |||| |||||| ||||||||||||||||| ||  |||| |||||||| |||||||||||||    
T  10698653 gttttggagtgcaactcacagaaaccatttcttgatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 10698572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 20522749 - 20522664
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    ||||||| |||||||||||||| | |||| ||||||| |||||||||||||||||||  |||| |||||||| ||||||| |||||    
T  20522749 aatggttctggagtacaactcaaagaaaccatttctgaatttatgcagggtgcataaatatttccttatgcaccataaccacgccc 20522664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 22857501 - 22857544
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22857501 taaggaaatccttatgcaccctgcataaattcagaaatggtttt 22857544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 121
Target Start/End: Complemental strand, 19281363 - 19281278
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||| | | |||  ||||||| |||||||||||||||| ||  |||| |||||||| |||||||||||||    
T  19281363 aatggttttggagtacaacttatagaaagcatttctgaatttatgcagggtgcacaaggatttccttatgcaccataaccgcgccc 19281278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Complemental strand, 19281506 - 19281447
Alignment:
Q  10 ccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactattt 69  Q
    |||||||||||||||||||||  | |||| |||||||||||||||||||| |||||||||    
T  19281506 ccttatgcaccctgcataaatctaaaaatagttttggagtacaactcacagaaactattt 19281447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 25119119 - 25119161
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  25119119 taaggaaattcttatgcaccctgcataaattcagaaatggttt 25119161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 117
Target Start/End: Complemental strand, 129274 - 129210
Alignment:
Q  52 aactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||| |||||||||||||||||||  ||||||||||| ||||| |||||||| |||||||||    
T  129274 aactcacataaactatttctggatttatatagggtgcataa-aatttccttatgcaccataaccgc 129210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 22857665 - 22857722
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  22857665 aaaaccatttctggatttatgcagggtgcataaggattttcttatgcaccataaccgc 22857722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Complemental strand, 26713201 - 26713136
Alignment:
Q  5 gaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||| ||| || |||| |||||    
T  26713201 gaaatccttatgcaccctatataaattcagaaatgattttggagtacagctcccagaaaccatttc 26713136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 30387209 - 30387161
Alignment:
Q  23 gcataaattcagaaatggttttggagtacaactcacaaaaactatttct 71  Q
    |||||||| |||||||||||||||||||||||||||| |||| ||||||    
T  30387209 gcataaatccagaaatggttttggagtacaactcacagaaaccatttct 30387161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 19281296 - 19281334
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatg 39  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  19281296 taaggaaatccttgtgcaccctgcataaattcagaaatg 19281334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 20522682 - 20522724
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||  ||||||||||||||||||||||||||||||||    
T  20522682 taaggaaatatttatgcaccctgcataaattcagaaatggttt 20522724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Original strand, 21384977 - 21385039
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgcccg 122  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| ||||||||| ||||    
T  21384977 aaaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgcacccg 21385039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 7371086 - 7371143
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||| |||||||||||||  |||| |||||||| |||||||||    
T  7371086 aaaaccatttctggatttaagcagggtgcataaagattttcttatgcaccataaccgc 7371143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 10588941 - 10588998
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||| || |||||||||||||||||||  |||| |||||||| |||||||||    
T  10588941 aaaactatttttgaatttatgcagggtgcataaggatttccttatgcaccataaccgc 10588998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Original strand, 25119458 - 25119515
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| ||||||||||||||||||| |||||||  |||| |||||||| |||||||||    
T  25119458 aaaaccatttctggatttatgcaggctgcataaggatttccttatgcaccataaccgc 25119515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Complemental strand, 14237990 - 14237958
Alignment:
Q  21 ctgcataaattcagaaatggttttggagtacaa 53  Q
    |||||||||||||||||||||||||||||||||    
T  14237990 ctgcataaattcagaaatggttttggagtacaa 14237958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 121
Target Start/End: Complemental strand, 25066282 - 25066204
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||| ||||||||||||| |||   |||||  ||||||||||||||||||| ||||| |||||  | |||||||||||||    
T  25066282 gttttgaagtacaactcacagaaa---tttctaaatttatgcagggtgcataagaatttccttatataccataaccgcgccc 25066204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10698590 - 10698632
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||||| ||||||||||||||||  |||||||||||    
T  10698590 taaggaaatccttgtgcaccctgcataaatcaagaaatggttt 10698632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 14237791 - 14237833
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||| ||||||| ||||||| ||||    
T  14237791 taaggaaatccttatgcaccctacataaatccagaaattgttt 14237833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21384802 - 21384844
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||    
T  21384802 taaggaaattcttatgcatcctgcataaatccagaaatggttt 21384844  T

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Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 25066401 - 25066367
Alignment:
Q  25 ataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||| ||||||||||||||||||||    
T  25066401 ataaattcagaaatagttttggagtacaactcaca 25066367  T

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Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 19284427 - 19284370
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||| | ||||||||||||||||||||  |||| |||||||| |||||||||    
T  19284427 aaaaccatttttagatttatgcagggtgcataaggatttccttatgcaccataaccgc 19284370  T

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Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25066222 - 25066259
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaat 38  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  25066222 taaggaaattcttatgcaccctgcataaatttagaaat 25066259  T

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Target: scaffold0516 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 1212 - 1293
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  1212 aatgattttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 1293  T

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Target: scaffold0516; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1279 - 1237
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  1279 taaggaaatccttatgcaccctgcataaatccagaaatggttt 1237  T

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Target: scaffold0249 (Bit Score: 54; Significance: 8e-22; HSPs: 3)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 23624 - 23543
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||    
T  23624 aatggttttggagtacaactcacggaaaccatttctggatttatgcagggtgcataaggatttccttatgcaccataaccgc 23543  T

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Target: scaffold0249; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 23766 - 23695
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatg--gttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||||||||||||||||||||||||  | |||||  |||||||||||||||||||| |||| |||||    
T  23766 taaggaaatccttatgcaccctgcataaatcgataaatggtgttttggagtacaactcacagaaaccatttc 23695  T

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Target: scaffold0249; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23557 - 23599
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  23557 taaggaaatccttatgcaccctgcataaatccagaaatggttt 23599  T

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Target: scaffold0117 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 17970 - 17856
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttac 100  Q
    ||||||||||||||  ||||||||||||||||| ||||| |||||  |||||||| |||  ||| ||||||||||||||||| |||||||||| |||| |    
T  17970 taaggaaatccttaa-caccctgcataaattcaaaaatgattttgaggtacaacttacagcaaccatttctggatttatgca-ggtgcataatgattttc 17873  T
Q  101 ttatgcatcataaccgc 117  Q
    ||||||| |||||||||    
T  17872 ttatgcaccataaccgc 17856  T

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Target: scaffold0009 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 81
Target Start/End: Original strand, 51918 - 51998
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttctggatttatgc 81  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||| ||||||  ||||||||    
T  51918 taaggaaatccttatgcaccctgcataaatccagaaatgattttggagtacaattgacaaaaaccatttctaaatttatgc 51998  T

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Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 66 - 113
Target Start/End: Complemental strand, 51955 - 51908
Alignment:
Q  66 atttctggatttatgcagggtgcataataatttacttatgcatcataa 113  Q
    |||||||||||||||||||||||||||  |||| |||||||| |||||    
T  51955 atttctggatttatgcagggtgcataaggatttccttatgcaccataa 51908  T

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Target: scaffold0664 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 3122 - 3203
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgcgccc 121  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||  |||| ||||||||  ||||| ||||||    
T  3122 gttttggagtacaactcacagaaaccatttctggatttatgcagggtgcataaagatttccttatgcacgataacagcgccc 3203  T

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Target: scaffold0664; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 3185 - 3143
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttt 43  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  3185 taaggaaatctttatgcaccctgcataaatccagaaatggttt 3143  T

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Target: scaffold0126 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 37646 - 37704
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    |||||||||||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  37646 taaggaaatccttatgcaccctacataaatccataaatggttttggagtacaactcaca 37704  T

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Target: scaffold0102 (Bit Score: 47; Significance: 1e-17; HSPs: 4)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33629 - 33687
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcaca 59  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||    
T  33629 taaggaaatccttatgcaccctgcataaatctagaaatggttttggaatacaactcaca 33687  T

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Target: scaffold0102; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 15656 - 15575
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||| ||||||||||||| |||| |||||||||||||||||| |||||||| ||  | |||||||| |||||||||    
T  15656 aatggttttgaagtacaactcacagaaaccatttctggatttatgcagagtgcataagaaaatccttatgcaccataaccgc 15575  T

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Target: scaffold0102; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 33781 - 33861
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    |||||||||||||||||| | ||| |||| |||| |||||||||||| ||||||||| ||||| |||||||| |||||||||    
T  33781 aatggttttggagtacaaatgacagaaaccatttttggatttatgca-ggtgcataagaatttccttatgcaccataaccgc 33861  T

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Target: scaffold0102; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 33672 - 33615
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| |||||||||    
T  33672 aaaaccatttctagatttatgcagggtgcataaggatttccttatgcaccataaccgc 33615  T

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Target: scaffold0031 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 80898 - 80828
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttct 71  Q
    |||| |||||||||||||||||||| |||||||||||||||||| ||||| |||||||| |||| ||||||    
T  80898 taagaaaatccttatgcaccctgcaaaaattcagaaatggtttttgagtataactcacagaaaccatttct 80828  T

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Target: scaffold0031; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 80743 - 80691
Alignment:
Q  40 gttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    ||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  80743 gttttggggtacaactcacagaaaccatttctggatttatgcggggtgcataa 80691  T

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Target: scaffold0031; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 58 - 117
Target Start/End: Original strand, 80853 - 80912
Alignment:
Q  58 caaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||| ||||||| |||| ||||||||||||||  |||| |||||||| |||||||||    
T  80853 caaaaaccatttctgaatttttgcagggtgcataaggattttcttatgcaccataaccgc 80912  T

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Target: scaffold0004 (Bit Score: 46; Significance: 5e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 96012 - 96081
Alignment:
Q  1 taaggaaatccttatgcaccctgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    |||| |||||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||| |||||    
T  96012 taagaaaatccttatgcaccctgcataaatctagaaatggttttggagtacaaatcacagaaaccatttc 96081  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 60 - 114
Target Start/End: Complemental strand, 96055 - 96001
Alignment:
Q  60 aaaactatttctggatttatgcagggtgcataataatttacttatgcatcataac 114  Q
    ||||| |||||| ||||||||||||||||||||  |||| |||||||| ||||||    
T  96055 aaaaccatttctagatttatgcagggtgcataaggattttcttatgcaccataac 96001  T

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Target: scaffold0019 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Original strand, 72666 - 72747
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataataatttacttatgcatcataaccgc 117  Q
    ||||||||||||||||||||||||||||  ||||||  |||||||||| ||||||||  ||||  ||||||| |||||||||    
T  72666 aatggttttggagtacaactcacaaaaatcatttctaaatttatgcagagtgcataaggatttcgttatgcaccataaccgc 72747  T

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Target: scaffold0291 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 3)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 70
Target Start/End: Complemental strand, 9720 - 9672
Alignment:
Q  22 tgcataaattcagaaatggttttggagtacaactcacaaaaactatttc 70  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  9720 tgcataaatccagaaatggttttggagtacaactcacataaactatttc 9672  T

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Target: scaffold0291; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 9590 - 9534
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    ||||||||||||||| |||||||| |||| ||||||| |||||||||| ||||||||    
T  9590 aatggttttggagtataactcacagaaaccatttctgaatttatgcagagtgcataa 9534  T

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Target: scaffold0291; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 43
Target Start/End: Original strand, 9531 - 9565
Alignment:
Q  9 tccttatgcaccctgcataaattcagaaatggttt 43  Q
    ||||||||||| |||||||||||||||||||||||    
T  9531 tccttatgcactctgcataaattcagaaatggttt 9565  T

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Target: scaffold0035 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 75772 - 75716
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttctggatttatgcagggtgcataa 92  Q
    |||||||||||| ||||||| ||| |||| |||| | ||||||||||||||||||||    
T  75772 aatggttttggaatacaacttacagaaaccatttttagatttatgcagggtgcataa 75716  T

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Target: scaffold0035; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 75908 - 75864
Alignment:
Q  9 tccttatgcaccctgcataaattcagaaatggttttggagtacaa 53  Q
    ||||||| |||| || ||||||| |||||||||||||||||||||    
T  75908 tccttatccaccttgaataaatttagaaatggttttggagtacaa 75864  T

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Target: scaffold0154 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 70
Target Start/End: Original strand, 37261 - 37295
Alignment:
Q  36 aatggttttggagtacaactcacaaaaactatttc 70  Q
    |||||||||||||||||||| ||||||||||||||    
T  37261 aatggttttggagtacaactgacaaaaactatttc 37295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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