View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4261_high_9 (Length: 245)

Name: NF4261_high_9
Description: NF4261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4261_high_9
NF4261_high_9
[»] chr5 (17 HSPs)
chr5 (53-178)||(14355386-14355512)
chr5 (168-202)||(15190816-15190850)
chr5 (168-202)||(1265951-1265985)
chr5 (168-202)||(3686755-3686789)
chr5 (168-202)||(6673229-6673263)
chr5 (168-202)||(7951564-7951598)
chr5 (168-202)||(9828395-9828429)
chr5 (168-202)||(14913650-14913684)
chr5 (168-202)||(16127261-16127295)
chr5 (168-202)||(22527694-22527728)
chr5 (168-202)||(26894874-26894908)
chr5 (168-202)||(34662206-34662240)
chr5 (168-202)||(40004410-40004444)
chr5 (171-200)||(24857561-24857590)
chr5 (171-200)||(39971019-39971048)
chr5 (168-200)||(9020696-9020728)
chr5 (168-200)||(10734526-10734558)
[»] chr8 (24 HSPs)
chr8 (168-202)||(36177104-36177138)
chr8 (168-202)||(43654204-43654238)
chr8 (168-235)||(7758877-7758944)
chr8 (168-238)||(2944237-2944307)
chr8 (171-202)||(5774053-5774084)
chr8 (171-202)||(37023285-37023316)
chr8 (168-202)||(51096-51130)
chr8 (168-202)||(1774344-1774378)
chr8 (168-202)||(8251934-8251968)
chr8 (168-202)||(8951429-8951463)
chr8 (168-202)||(13153930-13153964)
chr8 (168-202)||(18754146-18754180)
chr8 (168-202)||(28192176-28192210)
chr8 (168-202)||(28572048-28572082)
chr8 (168-202)||(28579641-28579675)
chr8 (168-202)||(32675758-32675792)
chr8 (168-202)||(34568492-34568526)
chr8 (172-202)||(38798330-38798360)
chr8 (168-202)||(39029180-39029214)
chr8 (171-200)||(5244628-5244657)
chr8 (171-200)||(35179605-35179634)
chr8 (168-200)||(17856779-17856811)
chr8 (168-200)||(26016571-26016603)
chr8 (168-200)||(42885056-42885088)
[»] chr7 (21 HSPs)
chr7 (168-202)||(25247691-25247725)
chr7 (168-202)||(34979078-34979112)
chr7 (171-202)||(12930323-12930354)
chr7 (171-202)||(18751983-18752014)
chr7 (168-202)||(6387327-6387361)
chr7 (168-202)||(19920565-19920599)
chr7 (168-202)||(21295153-21295187)
chr7 (168-202)||(26255098-26255132)
chr7 (168-202)||(29286038-29286072)
chr7 (168-202)||(32814435-32814469)
chr7 (168-202)||(32872376-32872410)
chr7 (168-202)||(33858867-33858901)
chr7 (168-202)||(36698132-36698166)
chr7 (168-202)||(38858300-38858334)
chr7 (168-202)||(39197720-39197754)
chr7 (168-202)||(39871614-39871648)
chr7 (168-202)||(40300232-40300266)
chr7 (168-202)||(41026097-41026131)
chr7 (168-202)||(41252362-41252396)
chr7 (168-202)||(48521031-48521065)
chr7 (171-200)||(9682607-9682636)
[»] chr4 (22 HSPs)
chr4 (168-202)||(15241482-15241516)
chr4 (169-202)||(4549890-4549923)
chr4 (168-235)||(52977984-52978051)
chr4 (168-238)||(26625967-26626037)
chr4 (169-200)||(37842178-37842209)
chr4 (168-202)||(4035827-4035861)
chr4 (168-202)||(4455062-4455096)
chr4 (168-202)||(5375558-5375592)
chr4 (168-202)||(5743660-5743694)
chr4 (168-202)||(9328241-9328275)
chr4 (168-202)||(30771530-30771564)
chr4 (168-202)||(32032994-32033028)
chr4 (168-202)||(33413520-33413554)
chr4 (168-202)||(34273220-34273254)
chr4 (172-202)||(37639888-37639918)
chr4 (168-202)||(44294791-44294825)
chr4 (168-202)||(45742807-45742841)
chr4 (168-202)||(47806862-47806896)
chr4 (171-200)||(13548985-13549014)
chr4 (171-200)||(30050087-30050116)
chr4 (168-200)||(20391440-20391472)
chr4 (168-200)||(35675923-35675955)
[»] chr3 (23 HSPs)
chr3 (168-202)||(26221290-26221324)
chr3 (168-238)||(7181352-7181422)
chr3 (168-202)||(4024054-4024088)
chr3 (168-202)||(9499498-9499532)
chr3 (168-202)||(10220935-10220969)
chr3 (168-202)||(12050393-12050427)
chr3 (168-202)||(14428612-14428646)
chr3 (168-202)||(21756488-21756522)
chr3 (168-202)||(22103930-22103964)
chr3 (168-202)||(25149123-25149157)
chr3 (168-202)||(26593766-26593800)
chr3 (168-202)||(30041018-30041052)
chr3 (168-202)||(35868084-35868118)
chr3 (168-202)||(37728715-37728749)
chr3 (168-202)||(43868105-43868139)
chr3 (168-202)||(44543784-44543818)
chr3 (168-202)||(45252775-45252809)
chr3 (168-202)||(46049987-46050021)
chr3 (168-202)||(51284063-51284097)
chr3 (171-200)||(4564242-4564271)
chr3 (171-200)||(20621687-20621716)
chr3 (171-200)||(49383349-49383378)
chr3 (168-200)||(45745780-45745812)
[»] scaffold0012 (1 HSPs)
scaffold0012 (168-235)||(47642-47709)
[»] chr1 (30 HSPs)
chr1 (168-200)||(16576095-16576127)
chr1 (168-238)||(4102679-4102749)
chr1 (168-199)||(7784258-7784289)
chr1 (171-202)||(18237099-18237130)
chr1 (168-199)||(30289604-30289635)
chr1 (171-202)||(45285811-45285842)
chr1 (168-202)||(943638-943672)
chr1 (168-202)||(1039382-1039416)
chr1 (168-202)||(1046288-1046322)
chr1 (172-202)||(5858261-5858291)
chr1 (168-202)||(11741399-11741433)
chr1 (168-202)||(15811233-15811267)
chr1 (168-202)||(23541981-23542015)
chr1 (168-202)||(30289863-30289897)
chr1 (168-202)||(30290267-30290301)
chr1 (168-202)||(36694856-36694890)
chr1 (168-202)||(36710957-36710991)
chr1 (168-202)||(37951950-37951984)
chr1 (168-202)||(39363195-39363229)
chr1 (168-202)||(39497435-39497469)
chr1 (168-202)||(44649631-44649665)
chr1 (168-202)||(45039414-45039448)
chr1 (168-202)||(46075868-46075902)
chr1 (168-202)||(49907023-49907057)
chr1 (168-202)||(50007977-50008011)
chr1 (168-202)||(52431175-52431209)
chr1 (173-202)||(9202506-9202535)
chr1 (169-202)||(13343776-13343809)
chr1 (171-200)||(29437857-29437886)
chr1 (168-200)||(38920241-38920273)
[»] chr6 (10 HSPs)
chr6 (171-202)||(7772181-7772212)
chr6 (168-202)||(231106-231140)
chr6 (168-202)||(4844402-4844436)
chr6 (168-202)||(8743190-8743224)
chr6 (168-202)||(30248649-30248683)
chr6 (168-202)||(34301833-34301867)
chr6 (168-201)||(23398141-23398174)
chr6 (168-200)||(9038644-9038676)
chr6 (168-200)||(11847835-11847867)
chr6 (168-200)||(25024509-25024541)
[»] chr2 (24 HSPs)
chr2 (168-199)||(1360055-1360086)
chr2 (171-202)||(11865290-11865321)
chr2 (171-202)||(26334846-26334877)
chr2 (168-199)||(29239335-29239366)
chr2 (168-202)||(2438227-2438261)
chr2 (168-202)||(7491846-7491880)
chr2 (168-202)||(8716893-8716927)
chr2 (168-198)||(8841399-8841429)
chr2 (168-202)||(11201685-11201719)
chr2 (168-202)||(13197646-13197680)
chr2 (168-202)||(16108476-16108510)
chr2 (168-202)||(17408295-17408329)
chr2 (168-202)||(20252212-20252246)
chr2 (168-202)||(27560208-27560242)
chr2 (168-202)||(34062666-34062700)
chr2 (168-202)||(34883849-34883883)
chr2 (168-202)||(36131029-36131063)
chr2 (168-202)||(40607704-40607738)
chr2 (168-202)||(41450518-41450552)
chr2 (171-200)||(40789091-40789120)
chr2 (167-200)||(42629372-42629405)
chr2 (171-199)||(16805536-16805564)
chr2 (171-199)||(16844818-16844846)
chr2 (168-200)||(34113789-34113821)
[»] scaffold0604 (1 HSPs)
scaffold0604 (168-202)||(3783-3817)
[»] scaffold0122 (1 HSPs)
scaffold0122 (168-202)||(12067-12101)
[»] scaffold0029 (1 HSPs)
scaffold0029 (168-202)||(51683-51717)
[»] scaffold0008 (1 HSPs)
scaffold0008 (168-202)||(259123-259157)
[»] scaffold0002 (1 HSPs)
scaffold0002 (168-200)||(355334-355366)


Alignment Details
Target: chr5 (Bit Score: 111; Significance: 4e-56; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 53 - 178
Target Start/End: Original strand, 14355386 - 14355512
Alignment:
Q  53 agaaatatcagtgtcttgaaaaaacgtgttccaacttaggaaccactcttgtcacgagctcgacataccacccgcaaataaatggtcaatttgaaaccct 152  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14355386 agaaatatcagtgtcttgaaaaaacgtgttccaacttgggaaccactcttgtcacgacctcgacataccacccgcaaataaatggtcaatttgaaaccct 14355485  T
Q  153 taacaaatgttta-cgctccctccgtc 178  Q
    ||||||||||||| |||||||||||||    
T  14355486 taacaaatgtttagcgctccctccgtc 14355512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 15190850 - 15190816
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||||||    
T  15190850 ctccctccgtccctaattataagactcttttgaga 15190816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 1265951 - 1265985
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  1265951 ctccctccgtccctaattataagacccttttgaga 1265985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 3686789 - 3686755
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  3686789 ctccttccgtccctaattataagactcttttgaga 3686755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 6673263 - 6673229
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  6673263 ctccctccgtccctaattataagacccttttgaga 6673229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 7951564 - 7951598
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  7951564 ctccctccgtccctaattataagacccttttgaga 7951598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 9828395 - 9828429
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  9828395 ctccctccgtccctaattataagacccttttgaga 9828429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 14913650 - 14913684
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  14913650 ctccctccgtccctaattataagacccttttgaga 14913684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 16127261 - 16127295
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  16127261 ctccctccgtccctaattataagacccttttgaga 16127295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 22527694 - 22527728
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  22527694 ctccctccgtccctaattataagacccttttgaga 22527728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 26894908 - 26894874
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  26894908 ctccctccgtccctaattataagacccttttgaga 26894874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 34662206 - 34662240
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  34662206 ctccctccgtccctaattataagacccttttgaga 34662240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 40004444 - 40004410
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  40004444 ctccctccgtccctaattataagacccttttgaga 40004410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 24857561 - 24857590
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  24857561 cctccgtccctaattataagactcttttga 24857590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 39971019 - 39971048
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  39971019 cctccgtccctaattataagactcttttga 39971048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 9020696 - 9020728
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  9020696 ctccctccgtccctaattataagacccttttga 9020728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 10734558 - 10734526
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  10734558 ctccctccgtccctaattataagacccttttga 10734526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 36177138 - 36177104
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||||||    
T  36177138 ctccctccgtccctaattataagactcttttgaga 36177104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 43654238 - 43654204
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||||||    
T  43654238 ctccctccgtccctaattataagactcttttgaga 43654204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Complemental strand, 7758944 - 7758877
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgagannnnnnnnngtccctttttacaagactcctttg 235  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||| ||||||||||||    
T  7758944 ctccctccgtccctaattataagacacttttgagaatattttttgtccctttttataagactcctttg 7758877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 2944307 - 2944237
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgagannnnnnnnngtccctttttacaagactcctttgcta 238  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||| ||||| |||||||||    
T  2944307 ctccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 2944237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Original strand, 5774053 - 5774084
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  5774053 cctccgtccctaattataagactcttttgaga 5774084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Complemental strand, 37023316 - 37023285
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  37023316 cctccgtccctaattataagactcttttgaga 37023285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 51130 - 51096
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  51130 ctccctccgtccctaattataagacccttttgaga 51096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 1774344 - 1774378
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  1774344 ctccctccgtccctaattataagacccttttgaga 1774378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 8251968 - 8251934
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  8251968 ctccctccgtccctaattataagacccttttgaga 8251934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 8951463 - 8951429
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  8951463 ctccctccgtccctaattataagacccttttgaga 8951429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 13153930 - 13153964
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  13153930 ctccctccgtccctaattataagacccttttgaga 13153964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 18754146 - 18754180
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  18754146 ctccctccgtccctaattataagacccttttgaga 18754180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 28192210 - 28192176
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  28192210 ctccctccgtccctaattataagacccttttgaga 28192176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 28572048 - 28572082
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  28572048 ctccctccgtccctaattataagacccttttgaga 28572082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 28579641 - 28579675
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  28579641 ctccctccgtccctaattataagacccttttgaga 28579675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 32675792 - 32675758
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  32675792 ctccctccgtccctaattataagacccttttgaga 32675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 34568492 - 34568526
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  34568492 ctccctccgtccctaattataagacccttttgaga 34568526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 38798360 - 38798330
Alignment:
Q  172 ctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||    
T  38798360 ctccgtccctaattataagactcttttgaga 38798330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 39029180 - 39029214
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  39029180 ctccctccgtccctaattataagacccttttgaga 39029214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Complemental strand, 5244657 - 5244628
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  5244657 cctccgtccctaattataagactcttttga 5244628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 35179605 - 35179634
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  35179605 cctccgtccctaattataagactcttttga 35179634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 17856811 - 17856779
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  17856811 ctccctccgtccctaattataagacccttttga 17856779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 26016571 - 26016603
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  26016571 ctccctccgtccctaattataagacccttttga 26016603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 42885056 - 42885088
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  42885056 ctccctccgtccctaattataagacccttttga 42885088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.00000000009; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 25247725 - 25247691
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||||||    
T  25247725 ctccctccgtccctaattataagactcttttgaga 25247691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 34979112 - 34979078
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||||||    
T  34979112 ctccctccgtccctaattataagactcttttgaga 34979078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Original strand, 12930323 - 12930354
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  12930323 cctccgtccctaattataagactcttttgaga 12930354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Complemental strand, 18752014 - 18751983
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  18752014 cctccgtccctaattataagactcttttgaga 18751983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 6387327 - 6387361
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||| |||||||||||||||||||||||    
T  6387327 ctccctccgtctctaattataagactcttttgaga 6387361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 19920565 - 19920599
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  19920565 ctccctccgtccctaattataagacccttttgaga 19920599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 21295153 - 21295187
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  21295153 ctccctccgtccctaattataagacccttttgaga 21295187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 26255098 - 26255132
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  26255098 ctccctccgtccctaattataagacccttttgaga 26255132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 29286072 - 29286038
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  29286072 ctccctccgtccctaattataagacccttttgaga 29286038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 32814435 - 32814469
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  32814435 ctccctccgtccctaattataagacccttttgaga 32814469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 32872410 - 32872376
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  32872410 ctccctccgtccctaattataagacccttttgaga 32872376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 33858901 - 33858867
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  33858901 ctccctccgtccctaattataagacccttttgaga 33858867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 36698166 - 36698132
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  36698166 ctccctccgtccctaattataagacccttttgaga 36698132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 38858300 - 38858334
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  38858300 ctccctccgtccctaattataagacccttttgaga 38858334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 39197720 - 39197754
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  39197720 ctccctccgtccctaattataagacccttttgaga 39197754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 39871648 - 39871614
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  39871648 ctccctccgtccctaattataagacccttttgaga 39871614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 40300232 - 40300266
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  40300232 ctccctccgtccctaattataagacccttttgaga 40300266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 41026131 - 41026097
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  41026131 ctccctccgtccctaattataagacccttttgaga 41026097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 41252396 - 41252362
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  41252396 ctccctccgtccctaattataagacccttttgaga 41252362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 48521031 - 48521065
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  48521031 ctccctccgtccctaattataagacccttttgaga 48521065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 9682607 - 9682636
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  9682607 cctccgtccctaattataagactcttttga 9682636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 35; Significance: 0.00000000009; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 15241482 - 15241516
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||||||    
T  15241482 ctccctccgtccctaattataagactcttttgaga 15241516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 202
Target Start/End: Complemental strand, 4549923 - 4549890
Alignment:
Q  169 tccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||||    
T  4549923 tccctccgtccctaattataagactcttttgaga 4549890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 52977984 - 52978051
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgagannnnnnnnngtccctttttacaagactcctttg 235  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||| ||||||||||||    
T  52977984 ctccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagactcctttg 52978051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 26626037 - 26625967
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgagannnnnnnnngtccctttttacaagactcctttgcta 238  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||| ||||| |||||||||    
T  26626037 ctccctccgtccctaattataagacccttttgagatttttttttgtccctttttataagacccctttgcta 26625967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 200
Target Start/End: Original strand, 37842178 - 37842209
Alignment:
Q  169 tccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||||    
T  37842178 tccctccgtccctaattataagactcttttga 37842209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 4035827 - 4035861
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  4035827 ctccctccgtccctaattataagacccttttgaga 4035861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 4455062 - 4455096
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||| ||||||||||||||||||||||||||||||    
T  4455062 ctccatccgtccctaattataagactcttttgaga 4455096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 5375592 - 5375558
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  5375592 ctccctccgtccctaattataagacccttttgaga 5375558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 5743694 - 5743660
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  5743694 ctccctccgtccctaattataagacccttttgaga 5743660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 9328275 - 9328241
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  9328275 ctccctccgtccctaattataagacccttttgaga 9328241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 30771530 - 30771564
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  30771530 ctccctccgtccctaattataagacccttttgaga 30771564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 32033028 - 32032994
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  32033028 ctccctccgtccctaattataagacccttttgaga 32032994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 33413520 - 33413554
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  33413520 ctccctccgtccctaattataagacccttttgaga 33413554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 34273254 - 34273220
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  34273254 ctccctccgtccctaattataagacccttttgaga 34273220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Complemental strand, 37639918 - 37639888
Alignment:
Q  172 ctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||    
T  37639918 ctccgtccctaattataagactcttttgaga 37639888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 44294791 - 44294825
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  44294791 ctccctccgtccctaattataagacccttttgaga 44294825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 45742841 - 45742807
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  45742841 ctccctccgtccctaattataagacccttttgaga 45742807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 47806862 - 47806896
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  47806862 ctccctccgtccctaattataagacccttttgaga 47806896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 13548985 - 13549014
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  13548985 cctccgtccctaattataagactcttttga 13549014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Complemental strand, 30050116 - 30050087
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  30050116 cctccgtccctaattataagactcttttga 30050087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 20391472 - 20391440
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  20391472 ctccctccgtccctaattataagacccttttga 20391440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 35675955 - 35675923
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  35675955 ctccctccgtccctaattataagacccttttga 35675923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 26221290 - 26221324
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||||||    
T  26221290 ctccctccgtccctaattataagactcttttgaga 26221324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 238
Target Start/End: Original strand, 7181352 - 7181422
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgagannnnnnnnngtccctttttacaagactcctttgcta 238  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||| ||||| |||||||||    
T  7181352 ctccctccgtccctaattataagacccttttgagaaatttttttgtccctttttataagacccctttgcta 7181422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 4024054 - 4024088
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  4024054 ctccctccgtccctaattataagacccttttgaga 4024088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 9499532 - 9499498
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  9499532 ctccctccgtccctaattataagacccttttgaga 9499498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 10220935 - 10220969
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  10220935 ctccctccgtccctaattataagacccttttgaga 10220969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 12050427 - 12050393
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  12050427 ctccctccgtccctaattataagacccttttgaga 12050393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 14428612 - 14428646
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  14428612 ctccctccgtccctaattataagacccttttgaga 14428646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 21756488 - 21756522
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  21756488 ctccctccgtccctaattataagacccttttgaga 21756522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 22103964 - 22103930
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  22103964 ctccctccgtccctaattataagacccttttgaga 22103930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 25149157 - 25149123
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  25149157 ctccctccgtccctaattataagacccttttgaga 25149123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 26593800 - 26593766
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  26593800 ctccctccgtccctaattataagacccttttgaga 26593766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 30041052 - 30041018
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||| ||||||||||||||||||||||||    
T  30041052 ctccctccgttcctaattataagactcttttgaga 30041018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 35868118 - 35868084
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  35868118 ctccctccgtccctaattataagacccttttgaga 35868084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 37728715 - 37728749
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  37728715 ctccctccgtccctaattataagacccttttgaga 37728749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 43868105 - 43868139
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  43868105 ctccctccgtccctaattataagacccttttgaga 43868139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 44543784 - 44543818
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  44543784 ctccctccgtccctaattataagacccttttgaga 44543818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 45252775 - 45252809
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  45252775 ctccctccgtccctaattataagacccttttgaga 45252809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 46050021 - 46049987
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  46050021 ctccctccgtccctaattataagacccttttgaga 46049987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 51284097 - 51284063
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  51284097 ctccctccgtccctaattataagacccttttgaga 51284063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 4564242 - 4564271
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  4564242 cctccgtccctaattataagactcttttga 4564271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Complemental strand, 20621716 - 20621687
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  20621716 cctccgtccctaattataagactcttttga 20621687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Original strand, 49383349 - 49383378
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  49383349 cctccgtccctaattataagactcttttga 49383378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 45745780 - 45745812
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||| |||||||||||||||||||    
T  45745780 ctccctccgtcccaaattataagactcttttga 45745812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 47642 - 47709
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgagannnnnnnnngtccctttttacaagactcctttg 235  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||| ||||||||||||    
T  47642 ctccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagactcctttg 47709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 16576127 - 16576095
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    |||||||||||||||||||||||||||||||||    
T  16576127 ctccctccgtccctaattataagactcttttga 16576095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 238
Target Start/End: Complemental strand, 4102749 - 4102679
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgagannnnnnnnngtccctttttacaagactcctttgcta 238  Q
    ||||||||||||||||||||||||| |||||||||         ||||||||||| ||||| |||||||||    
T  4102749 ctccctccgtccctaattataagacccttttgagaattttttttgtccctttttataagacccctttgcta 4102679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Complemental strand, 7784289 - 7784258
Alignment:
Q  168 ctccctccgtccctaattataagactcttttg 199  Q
    ||||||||||||||||||||||||||||||||    
T  7784289 ctccctccgtccctaattataagactcttttg 7784258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Original strand, 18237099 - 18237130
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  18237099 cctccgtccctaattataagactcttttgaga 18237130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Original strand, 30289604 - 30289635
Alignment:
Q  168 ctccctccgtccctaattataagactcttttg 199  Q
    ||||||||||||||||||||||||||||||||    
T  30289604 ctccctccgtccctaattataagactcttttg 30289635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Complemental strand, 45285842 - 45285811
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  45285842 cctccgtccctaattataagactcttttgaga 45285811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 943672 - 943638
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  943672 ctccctccgtccctaattataagacccttttgaga 943638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 1039416 - 1039382
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  1039416 ctccctccgtccctaattataagacccttttgaga 1039382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 1046322 - 1046288
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  1046322 ctccctccgtccctaattataagacccttttgaga 1046288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 5858261 - 5858291
Alignment:
Q  172 ctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||||||||||    
T  5858261 ctccgtccctaattataagactcttttgaga 5858291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 11741399 - 11741433
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  11741399 ctccctccgtccctaattataagacccttttgaga 11741433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 15811267 - 15811233
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  15811267 ctccctccgtccctaattataagacccttttgaga 15811233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 23541981 - 23542015
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  23541981 ctccctccgtccctaattataagacccttttgaga 23542015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 30289897 - 30289863
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  30289897 ctccctccgtccctaattataagacccttttgaga 30289863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 30290267 - 30290301
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  30290267 ctccctccgtccctaattataagacccttttgaga 30290301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 36694856 - 36694890
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  36694856 ctccctccgtccctaattataagacccttttgaga 36694890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 36710957 - 36710991
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  36710957 ctccctccgtccctaattataagacccttttgaga 36710991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 37951984 - 37951950
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  37951984 ctccctccgtccctaattataagacccttttgaga 37951950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 39363229 - 39363195
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  39363229 ctccctccgtccctaattataagacccttttgaga 39363195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 39497435 - 39497469
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  39497435 ctccctccgtccctaattataagacccttttgaga 39497469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 44649631 - 44649665
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  44649631 ctccctccgtccctaattataagacccttttgaga 44649665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 45039414 - 45039448
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  45039414 ctccctccgtccctaattataagacccttttgaga 45039448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 46075902 - 46075868
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  46075902 ctccctccgtccctaattataagacccttttgaga 46075868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 49907023 - 49907057
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  49907023 ctccctccgtccctaattataagacccttttgaga 49907057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 50007977 - 50008011
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||| |||||||||||||||||||||||||||    
T  50007977 ctccctctgtccctaattataagactcttttgaga 50008011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 52431209 - 52431175
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  52431209 ctccctccgtccctaattataagacccttttgaga 52431175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 173 - 202
Target Start/End: Complemental strand, 9202535 - 9202506
Alignment:
Q  173 tccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||    
T  9202535 tccgtccctaattataagactcttttgaga 9202506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 202
Target Start/End: Original strand, 13343776 - 13343809
Alignment:
Q  169 tccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||| |||||||||    
T  13343776 tccctccgtccctaattataagacccttttgaga 13343809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Complemental strand, 29437886 - 29437857
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  29437886 cctccgtccctaattataagactcttttga 29437857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 38920241 - 38920273
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  38920241 ctccctccgtccctaattataagacccttttga 38920273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Original strand, 7772181 - 7772212
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  7772181 cctccgtccctaattataagactcttttgaga 7772212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 231140 - 231106
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  231140 ctccctccgtccctaattataagacccttttgaga 231106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 4844402 - 4844436
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  4844402 ctccctccgtccctaattataagacccttttgaga 4844436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 8743190 - 8743224
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  8743190 ctccctccgtccctaattataagacccttttgaga 8743224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 30248649 - 30248683
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  30248649 ctccctccgtccctaattataagacccttttgaga 30248683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 34301867 - 34301833
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  34301867 ctccctccgtccctaattataagacccttttgaga 34301833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 168 - 201
Target Start/End: Complemental strand, 23398174 - 23398141
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgag 201  Q
    ||||||||||||||||||||||||| ||||||||    
T  23398174 ctccctccgtccctaattataagacccttttgag 23398141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Original strand, 9038644 - 9038676
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  9038644 ctccctccgtccctaattataagacccttttga 9038676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 11847867 - 11847835
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  11847867 ctccctccgtccctaattataagacccttttga 11847835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 25024541 - 25024509
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    |||||||||||||||||||||||| ||||||||    
T  25024541 ctccctccgtccctaattataagattcttttga 25024509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 32; Significance: 0.000000005; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Complemental strand, 1360086 - 1360055
Alignment:
Q  168 ctccctccgtccctaattataagactcttttg 199  Q
    ||||||||||||||||||||||||||||||||    
T  1360086 ctccctccgtccctaattataagactcttttg 1360055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Complemental strand, 11865321 - 11865290
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  11865321 cctccgtccctaattataagactcttttgaga 11865290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 202
Target Start/End: Complemental strand, 26334877 - 26334846
Alignment:
Q  171 cctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||||||||||    
T  26334877 cctccgtccctaattataagactcttttgaga 26334846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Original strand, 29239335 - 29239366
Alignment:
Q  168 ctccctccgtccctaattataagactcttttg 199  Q
    ||||||||||||||||||||||||||||||||    
T  29239335 ctccctccgtccctaattataagactcttttg 29239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 2438227 - 2438261
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  2438227 ctccctccgtccctaattataagacccttttgaga 2438261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 7491846 - 7491880
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  7491846 ctccctccgtccctaattataagacccttttgaga 7491880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 8716927 - 8716893
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  8716927 ctccctccgtccctaattataagacccttttgaga 8716893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 198
Target Start/End: Original strand, 8841399 - 8841429
Alignment:
Q  168 ctccctccgtccctaattataagactctttt 198  Q
    |||||||||||||||||||||||||||||||    
T  8841399 ctccctccgtccctaattataagactctttt 8841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 11201685 - 11201719
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  11201685 ctccctccgtccctaattataagacccttttgaga 11201719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 13197680 - 13197646
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||| ||||||||||    
T  13197680 ctccctccgtccctaattataagattcttttgaga 13197646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 16108510 - 16108476
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    |||||||||||||||||||||||| ||||||||||    
T  16108510 ctccctccgtccctaattataagattcttttgaga 16108476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 17408329 - 17408295
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  17408329 ctccctccgtccctaattataagacccttttgaga 17408295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 20252212 - 20252246
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  20252212 ctccctccgtccctaattataagacccttttgaga 20252246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 27560208 - 27560242
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  27560208 ctccctccgtccctaattataagacccttttgaga 27560242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 34062700 - 34062666
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  34062700 ctccctccgtccctaattataagacccttttgaga 34062666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 34883883 - 34883849
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  34883883 ctccctccgtccctaattataagacccttttgaga 34883849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 36131063 - 36131029
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  36131063 ctccctccgtccctaattataagacccttttgaga 36131029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 40607704 - 40607738
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  40607704 ctccctccgtccctaattataagacccttttgaga 40607738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 41450518 - 41450552
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  41450518 ctccctccgtccctaattataagacccttttgaga 41450552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 171 - 200
Target Start/End: Complemental strand, 40789120 - 40789091
Alignment:
Q  171 cctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||||||||    
T  40789120 cctccgtccctaattataagactcttttga 40789091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 200
Target Start/End: Original strand, 42629372 - 42629405
Alignment:
Q  167 gctccctccgtccctaattataagactcttttga 200  Q
    |||||||||||||||||||||||||| |||||||    
T  42629372 gctccctccgtccctaattataagacccttttga 42629405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 16805536 - 16805564
Alignment:
Q  171 cctccgtccctaattataagactcttttg 199  Q
    |||||||||||||||||||||||||||||    
T  16805536 cctccgtccctaattataagactcttttg 16805564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 199
Target Start/End: Original strand, 16844818 - 16844846
Alignment:
Q  171 cctccgtccctaattataagactcttttg 199  Q
    |||||||||||||||||||||||||||||    
T  16844818 cctccgtccctaattataagactcttttg 16844846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 34113821 - 34113789
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  34113821 ctccctccgtccctaattataagacccttttga 34113789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 3817 - 3783
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  3817 ctccctccgtccctaattataagacccttttgaga 3783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Original strand, 12067 - 12101
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  12067 ctccctccgtccctaattataagacccttttgaga 12101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 51717 - 51683
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  51717 ctccctccgtccctaattataagacccttttgaga 51683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 202
Target Start/End: Complemental strand, 259157 - 259123
Alignment:
Q  168 ctccctccgtccctaattataagactcttttgaga 202  Q
    ||||||||||||||||||||||||| |||||||||    
T  259157 ctccctccgtccctaattataagacccttttgaga 259123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 200
Target Start/End: Complemental strand, 355366 - 355334
Alignment:
Q  168 ctccctccgtccctaattataagactcttttga 200  Q
    ||||||||||||||||||||||||| |||||||    
T  355366 ctccctccgtccctaattataagacccttttga 355334  T

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