View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4261_low_18 (Length: 229)

Name: NF4261_low_18
Description: NF4261
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4261_low_18
NF4261_low_18
[»] chr2 (34 HSPs)
chr2 (4-74)||(16108443-16108513)
chr2 (1-73)||(15228114-15228186)
chr2 (36-73)||(13197645-13197682)
chr2 (4-73)||(16805759-16805828)
chr2 (4-75)||(1359789-1359860)
chr2 (4-75)||(2438223-2438294)
chr2 (36-78)||(22897386-22897428)
chr2 (4-74)||(27560205-27560275)
chr2 (36-73)||(16845072-16845109)
chr2 (40-77)||(29239329-29239366)
chr2 (4-73)||(32120944-32121013)
chr2 (4-73)||(34883816-34883885)
chr2 (4-73)||(40607702-40607771)
chr2 (167-214)||(18488131-18488178)
chr2 (1-68)||(30466110-30466176)
chr2 (36-74)||(7491843-7491881)
chr2 (36-74)||(8716892-8716930)
chr2 (36-78)||(11201678-11201720)
chr2 (40-73)||(1360055-1360088)
chr2 (36-73)||(8990204-8990241)
chr2 (36-73)||(11852185-11852222)
chr2 (36-73)||(11865289-11865326)
chr2 (40-77)||(16805527-16805564)
chr2 (40-77)||(16844809-16844846)
chr2 (36-73)||(17408294-17408331)
chr2 (36-73)||(20252210-20252247)
chr2 (36-73)||(26334845-26334882)
chr2 (36-73)||(34062665-34062702)
chr2 (36-73)||(36131028-36131065)
chr2 (36-73)||(41450516-41450553)
chr2 (37-73)||(6027618-6027654)
chr2 (41-73)||(8841397-8841429)
chr2 (39-75)||(34113789-34113825)
chr2 (36-68)||(41968202-41968234)
[»] chr8 (29 HSPs)
chr8 (4-76)||(36177071-36177143)
chr8 (1-76)||(2944237-2944312)
chr8 (4-75)||(28192143-28192214)
chr8 (4-75)||(41014502-41014573)
chr8 (4-74)||(51063-51133)
chr8 (4-78)||(44251089-44251163)
chr8 (37-75)||(44502618-44502656)
chr8 (4-73)||(13153928-13153997)
chr8 (4-73)||(14699452-14699521)
chr8 (4-73)||(32675725-32675794)
chr8 (4-73)||(34490517-34490586)
chr8 (1-74)||(39029177-39029250)
chr8 (36-73)||(40529307-40529344)
chr8 (36-73)||(43654203-43654240)
chr8 (36-73)||(44748463-44748500)
chr8 (5-73)||(5774048-5774116)
chr8 (36-75)||(1774340-1774379)
chr8 (36-75)||(37023284-37023323)
chr8 (36-73)||(7758909-7758946)
chr8 (36-73)||(8251933-8251970)
chr8 (36-73)||(8951428-8951465)
chr8 (42-75)||(12255094-12255127)
chr8 (42-75)||(12260637-12260670)
chr8 (36-73)||(18754144-18754181)
chr8 (36-73)||(28572046-28572083)
chr8 (36-73)||(28579639-28579676)
chr8 (36-73)||(33745895-33745932)
chr8 (36-73)||(34568490-34568527)
chr8 (48-76)||(9035551-9035579)
[»] chr7 (29 HSPs)
chr7 (1-73)||(19920563-19920635)
chr7 (4-75)||(20074887-20074958)
chr7 (4-73)||(34979045-34979114)
chr7 (36-78)||(26255091-26255133)
chr7 (36-82)||(39197709-39197755)
chr7 (36-73)||(7703820-7703857)
chr7 (4-73)||(21295151-21295220)
chr7 (36-73)||(25247690-25247727)
chr7 (36-73)||(29177252-29177289)
chr7 (4-73)||(38858298-38858367)
chr7 (4-73)||(39871581-39871650)
chr7 (4-73)||(41252329-41252398)
chr7 (4-68)||(17317446-17317510)
chr7 (4-76)||(40300227-40300299)
chr7 (1-68)||(9299102-9299169)
chr7 (36-74)||(19845669-19845707)
chr7 (36-73)||(6387325-6387362)
chr7 (36-73)||(12930318-12930355)
chr7 (36-73)||(18751982-18752019)
chr7 (36-73)||(19292839-19292876)
chr7 (36-73)||(21119557-21119594)
chr7 (36-73)||(29286037-29286074)
chr7 (36-73)||(32814433-32814470)
chr7 (36-73)||(32872375-32872412)
chr7 (36-73)||(33858866-33858903)
chr7 (36-73)||(36698131-36698168)
chr7 (36-73)||(41026096-41026133)
chr7 (36-73)||(48521029-48521066)
chr7 (39-79)||(45907507-45907547)
[»] chr3 (36 HSPs)
chr3 (5-81)||(14428602-14428678)
chr3 (4-73)||(7051688-7051757)
chr3 (1-73)||(7181350-7181422)
chr3 (6-73)||(33868448-33868515)
chr3 (36-74)||(20656310-20656348)
chr3 (4-73)||(9499465-9499534)
chr3 (4-73)||(22103897-22103966)
chr3 (4-73)||(25149090-25149159)
chr3 (36-73)||(26221288-26221325)
chr3 (36-73)||(32963105-32963142)
chr3 (4-73)||(35868051-35868120)
chr3 (4-73)||(37728713-37728782)
chr3 (4-73)||(44543782-44543851)
chr3 (36-76)||(10220930-10220970)
chr3 (36-76)||(16435236-16435276)
chr3 (36-76)||(21756483-21756523)
chr3 (36-75)||(30041017-30041056)
chr3 (36-75)||(33212395-33212434)
chr3 (36-75)||(46049986-46050025)
chr3 (4-74)||(4024051-4024121)
chr3 (39-73)||(10044842-10044876)
chr3 (36-74)||(26593765-26593803)
chr3 (39-73)||(32978481-32978515)
chr3 (36-73)||(12050392-12050429)
chr3 (36-73)||(21458982-21459019)
chr3 (36-73)||(27646306-27646343)
chr3 (36-73)||(28673294-28673331)
chr3 (36-73)||(36005502-36005539)
chr3 (36-73)||(43868103-43868140)
chr3 (36-73)||(45252773-45252810)
chr3 (36-73)||(48887946-48887983)
chr3 (36-73)||(50517522-50517559)
chr3 (36-73)||(51284062-51284099)
chr3 (36-73)||(53164163-53164200)
chr3 (39-75)||(4564235-4564271)
chr3 (37-73)||(23776495-23776531)
[»] chr5 (22 HSPs)
chr5 (4-73)||(15190783-15190852)
chr5 (4-75)||(1265947-1266018)
chr5 (4-79)||(13660855-13660930)
chr5 (4-73)||(9828393-9828462)
chr5 (4-73)||(22527692-22527761)
chr5 (4-73)||(40004377-40004446)
chr5 (36-73)||(41384172-41384209)
chr5 (4-73)||(41641095-41641164)
chr5 (39-75)||(2106829-2106865)
chr5 (36-73)||(3686754-3686791)
chr5 (36-73)||(6673228-6673265)
chr5 (37-74)||(7951561-7951598)
chr5 (36-73)||(14913648-14913685)
chr5 (36-73)||(16127259-16127296)
chr5 (36-73)||(22657768-22657805)
chr5 (36-73)||(26894873-26894910)
chr5 (4-73)||(34662204-34662273)
chr5 (36-73)||(35547261-35547298)
chr5 (36-73)||(40643094-40643131)
chr5 (40-73)||(41383912-41383945)
chr5 (39-75)||(10734526-10734562)
chr5 (37-81)||(19571940-19571984)
[»] chr4 (35 HSPs)
chr4 (1-77)||(37842171-37842247)
chr4 (4-76)||(55632227-55632299)
chr4 (4-75)||(47806858-47806929)
chr4 (1-80)||(49373658-49373737)
chr4 (4-70)||(4549857-4549923)
chr4 (4-74)||(5743627-5743697)
chr4 (36-74)||(15241479-15241517)
chr4 (4-74)||(34273187-34273257)
chr4 (4-74)||(50352063-50352133)
chr4 (4-73)||(4035825-4035894)
chr4 (4-73)||(5375525-5375594)
chr4 (36-73)||(6753525-6753562)
chr4 (36-73)||(17610020-17610057)
chr4 (36-73)||(24754078-24754115)
chr4 (4-73)||(39144404-39144473)
chr4 (4-77)||(43387961-43388034)
chr4 (37-73)||(6462691-6462727)
chr4 (1-73)||(26625967-26626039)
chr4 (39-79)||(35675923-35675963)
chr4 (36-75)||(30771526-30771565)
chr4 (36-75)||(52977980-52978019)
chr4 (4-73)||(4455060-4455130)
chr4 (36-74)||(19282081-19282119)
chr4 (36-70)||(20747173-20747207)
chr4 (36-78)||(50533879-50533921)
chr4 (36-73)||(9328240-9328277)
chr4 (36-73)||(10588075-10588112)
chr4 (36-73)||(28298371-28298408)
chr4 (36-73)||(32032993-32033030)
chr4 (36-73)||(33413518-33413555)
chr4 (36-73)||(44294789-44294826)
chr4 (36-73)||(45742806-45742843)
chr4 (37-66)||(49490169-49490198)
chr4 (37-73)||(36901111-36901147)
chr4 (36-68)||(54623806-54623838)
[»] chr1 (33 HSPs)
chr1 (1-73)||(4102679-4102751)
chr1 (4-75)||(15811200-15811271)
chr1 (4-75)||(49907019-49907090)
chr1 (4-73)||(1039349-1039418)
chr1 (4-73)||(1046255-1046324)
chr1 (4-73)||(11741397-11741466)
chr1 (4-73)||(16576060-16576129)
chr1 (4-73)||(23541979-23542048)
chr1 (4-73)||(36694854-36694923)
chr1 (4-73)||(36710955-36711024)
chr1 (4-73)||(37951917-37951986)
chr1 (4-73)||(39497433-39497502)
chr1 (4-73)||(45039412-45039481)
chr1 (4-73)||(52431142-52431211)
chr1 (36-75)||(943637-943676)
chr1 (5-72)||(30289831-30289898)
chr1 (36-75)||(30290263-30290302)
chr1 (36-75)||(39363194-39363233)
chr1 (36-75)||(44649627-44649666)
chr1 (40-73)||(7784258-7784291)
chr1 (36-73)||(18237094-18237131)
chr1 (36-73)||(22567066-22567103)
chr1 (40-73)||(30289602-30289635)
chr1 (39-68)||(34503240-34503269)
chr1 (36-73)||(46075867-46075904)
chr1 (36-73)||(50007975-50008012)
chr1 (36-73)||(50008483-50008520)
chr1 (36-73)||(50246929-50246966)
chr1 (36-76)||(14171539-14171579)
chr1 (36-76)||(33336798-33336838)
chr1 (48-76)||(44646543-44646571)
chr1 (48-76)||(44649901-44649929)
chr1 (36-68)||(45285810-45285842)
[»] chr6 (14 HSPs)
chr6 (39-74)||(25024509-25024544)
chr6 (4-74)||(34301800-34301870)
chr6 (36-73)||(25197152-25197189)
chr6 (1-76)||(925898-925973)
chr6 (36-75)||(29036124-29036163)
chr6 (36-74)||(231105-231143)
chr6 (39-73)||(1730104-1730138)
chr6 (40-73)||(1779784-1779817)
chr6 (36-73)||(4844400-4844437)
chr6 (36-73)||(7772176-7772213)
chr6 (36-73)||(8743188-8743225)
chr6 (36-73)||(9341838-9341875)
chr6 (36-73)||(30248647-30248684)
chr6 (39-75)||(11847835-11847871)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-74)||(117845-117915)
[»] scaffold0457 (1 HSPs)
scaffold0457 (36-73)||(4663-4700)
[»] scaffold0604 (1 HSPs)
scaffold0604 (1-73)||(3748-3819)
[»] scaffold0250 (1 HSPs)
scaffold0250 (36-73)||(9426-9463)
[»] scaffold0122 (1 HSPs)
scaffold0122 (36-73)||(12065-12102)
[»] scaffold0121 (1 HSPs)
scaffold0121 (36-73)||(24630-24667)
[»] scaffold0029 (1 HSPs)
scaffold0029 (36-73)||(51682-51719)
[»] scaffold0012 (2 HSPs)
scaffold0012 (36-73)||(47640-47677)
scaffold0012 (40-73)||(47904-47937)
[»] scaffold0008 (1 HSPs)
scaffold0008 (36-73)||(259122-259159)


Alignment Details
Target: chr2 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 16108443 - 16108513
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        |||||||||||||||||||||||||||||||||||||||    
T  16108443 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagaatcttataattagggacggagggagtaa 16108513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 15228114 - 15228186
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||||||| ||        |||||||||| |||||||||||||||||||||||||||    
T  15228114 tagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagta 15228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 13197645 - 13197682
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13197645 ttctcaaaagaatcttataattagggacggagggagta 13197682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 16805759 - 16805828
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        |||||||||| |||||||||||||||||||||||||||    
T  16805759 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagta 16805828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 1359860 - 1359789
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||| |||| |||||||||||||||||||||||||||||    
T  1359860 caaaggggtcttataaaaagggacaaaaaaaattctccaaaggatcttataattagggacggagggagtaat 1359789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 2438294 - 2438223
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||||    
T  2438294 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaat 2438223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 22897428 - 22897386
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaattaa 78  Q
    |||||||||| ||||||||||||||||||||||||||| ||||    
T  22897428 ttctcaaaaggatcttataattagggacggagggagtatttaa 22897386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 27560275 - 27560205
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        ||||||||||  |||||||||||||||||||||||||||    
T  27560275 caaaggggtcttataaaaagggacaaaaatttttctcaaaagggtcttataattagggacggagggagtaa 27560205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 16845072 - 16845109
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  16845072 ttctcaaaaggatcttataattagggacggagggagta 16845109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 29239366 - 29239329
Alignment:
Q  40 caaaagaatcttataattagggacggagggagtaatta 77  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29239366 caaaagagtcttataattagggacggagggagtaatta 29239329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 32121013 - 32120944
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        || ||||||| |||||||||||||||||||||||||||    
T  32121013 caaaggggtcttataaaaagggacaaatttttttttcaaaaggatcttataattagggacggagggagta 32120944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 34883816 - 34883885
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  34883816 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 34883885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 40607771 - 40607702
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  40607771 caaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 40607702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 167 - 214
Target Start/End: Complemental strand, 18488178 - 18488131
Alignment:
Q  167 aaagcactgatcggtttttgtacgcatttcggaaaagatcaaatatct 214  Q
    ||||||| |||||||||||| | ||||||||||||||| |||||||||    
T  18488178 aaagcaccgatcggtttttgcatgcatttcggaaaagaccaaatatct 18488131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30466176 - 30466110
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagg 68  Q
    ||||||||||||||||||||||||||         |||||||||| ||||||||||||||||||||||    
T  30466176 tagcaaaggggtcttataaaaaggaa-aaaaaaaattctcaaaaggatcttataattagggacggagg 30466110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 7491881 - 7491843
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  7491881 ttctcaaaagggtcttataattagggacggagggagtaa 7491843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 8716892 - 8716930
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  8716892 ttctcaaaagggtcttataattagggacggagggagtaa 8716930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 11201720 - 11201678
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaattaa 78  Q
    ||||||||||  |||||||||||||||||||||||||| ||||    
T  11201720 ttctcaaaagggtcttataattagggacggagggagtatttaa 11201678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 1360055 - 1360088
Alignment:
Q  40 caaaagaatcttataattagggacggagggagta 73  Q
    ||||||| ||||||||||||||||||||||||||    
T  1360055 caaaagagtcttataattagggacggagggagta 1360088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 8990241 - 8990204
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||  |||||||||||||||||||||||||||    
T  8990241 ttctcaaaaagatcttataattagggacggagggagta 8990204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 11852185 - 11852222
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  11852185 ttctcaaaaggatcttataattagggacggaggtagta 11852222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 11865289 - 11865326
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  11865289 ttctcaaaagagtcttataattagggacggaggtagta 11865326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 16805564 - 16805527
Alignment:
Q  40 caaaagaatcttataattagggacggagggagtaatta 77  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  16805564 caaaagagtcttataattagggacggaggaagtaatta 16805527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 16844846 - 16844809
Alignment:
Q  40 caaaagaatcttataattagggacggagggagtaatta 77  Q
    ||||||| ||||||||||||||||||||| ||||||||    
T  16844846 caaaagagtcttataattagggacggaggaagtaatta 16844809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 17408294 - 17408331
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  17408294 ttctcaaaagggtcttataattagggacggagggagta 17408331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 20252247 - 20252210
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  20252247 ttctcaaaagggtcttataattagggacggagggagta 20252210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 26334845 - 26334882
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  26334845 ttctcaaaagagtcttataattagggacggaggtagta 26334882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 34062665 - 34062702
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  34062665 ttctcaaaagggtcttataattagggacggagggagta 34062702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 36131028 - 36131065
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  36131028 ttctcaaaagggtcttataattagggacggagggagta 36131065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 41450553 - 41450516
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  41450553 ttctcaaaagggtcttataattagggacggagggagta 41450516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 6027654 - 6027618
Alignment:
Q  37 tctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  6027654 tctcaaaaggatcttataattagggacggaggtagta 6027618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 8841429 - 8841397
Alignment:
Q  41 aaaagaatcttataattagggacggagggagta 73  Q
    |||||| ||||||||||||||||||||||||||    
T  8841429 aaaagagtcttataattagggacggagggagta 8841397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 34113789 - 34113825
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaat 75  Q
    |||||||  ||||||||||||||||||||||||||||    
T  34113789 tcaaaagggtcttataattagggacggagggagtaat 34113825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 41968202 - 41968234
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagg 68  Q
    |||||||||| ||||||||||||||||||||||    
T  41968202 ttctcaaaaggatcttataattagggacggagg 41968234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 36177071 - 36177143
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    ||||||||||||||||||||| ||        ||||||||||| |||||||||||||||||||||||||||||    
T  36177071 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagtaatt 36177143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2944237 - 2944312
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    |||||||||||||||||||||||| ||        ||||||||||  |||||||||||||||||||||||||||||    
T  2944237 tagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaatt 2944312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 28192143 - 28192214
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||||    
T  28192143 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaat 28192214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 41014573 - 41014502
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||||||         ||||||||  |||||||||||||||||||||||||||||    
T  41014573 caaaggggtcttataaaaaggaacaaaaaaaaatctcaaaaagatcttataattagggacggagggagtaat 41014502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 51063 - 51133
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        ||||||||||  |||||||||||||||||||||||||||    
T  51063 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaa 51133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 44251089 - 44251163
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaattaa 78  Q
    ||||||||||||||||||||| ||        |||||||||   |||||||||||||||||||||||||||||||    
T  44251089 caaaggggtcttataaaaagggacaaaaaaaattctcaaaatggtcttataattagggacggagggagtaattaa 44251163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 44502656 - 44502618
Alignment:
Q  37 tctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  44502656 tctcaaaaggatcttataattagggacggagggagtaat 44502618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 13153997 - 13153928
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  13153997 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 13153928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 14699521 - 14699452
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        |||||||||| |||||||||||||||||||||| ||||    
T  14699521 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggaggaagta 14699452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 32675725 - 32675794
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  32675725 caaaggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagta 32675794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 34490586 - 34490517
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        |||||||||  |||||||||||||||||||||||||||    
T  34490586 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaagatcttataattagggacggagggagta 34490517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 39029250 - 39029177
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    |||||||||||||||||||||| | ||        ||||||||||  |||||||||||||||||||||||||||    
T  39029250 tagcaaaggggtcttataaaaaaggacaaaaaattttctcaaaagggtcttataattagggacggagggagtaa 39029177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 40529344 - 40529307
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  40529344 ttctcaaaaggatcttataattagggacggagggagta 40529307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 43654203 - 43654240
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  43654203 ttctcaaaagagtcttataattagggacggagggagta 43654240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 44748463 - 44748500
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  44748463 ttctcaaaagaatcttataattagggacggaggtagta 44748500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 5774116 - 5774048
Alignment:
Q  5 aaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||| ||        ||||||||||| ||||||||||||||||||||| ||||    
T  5774116 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggaggtagta 5774048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 1774379 - 1774340
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  1774379 ttctcaaaagggtcttataattagggacggagggagtaat 1774340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 37023284 - 37023323
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  37023284 ttctcaaaagagtcttataattagggacggaggcagtaat 37023323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 7758909 - 7758946
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  7758909 ttctcaaaagtgtcttataattagggacggagggagta 7758946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 8251933 - 8251970
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  8251933 ttctcaaaagggtcttataattagggacggagggagta 8251970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 8951428 - 8951465
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  8951428 ttctcaaaagggtcttataattagggacggagggagta 8951465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 12255127 - 12255094
Alignment:
Q  42 aaagaatcttataattagggacggagggagtaat 75  Q
    |||| |||||||||||||||||||||||||||||    
T  12255127 aaaggatcttataattagggacggagggagtaat 12255094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 12260670 - 12260637
Alignment:
Q  42 aaagaatcttataattagggacggagggagtaat 75  Q
    |||| |||||||||||||||||||||||||||||    
T  12260670 aaaggatcttataattagggacggagggagtaat 12260637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 18754181 - 18754144
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  18754181 ttctcaaaagggtcttataattagggacggagggagta 18754144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 28572083 - 28572046
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  28572083 ttctcaaaagggtcttataattagggacggagggagta 28572046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 28579676 - 28579639
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  28579676 ttctcaaaagggtcttataattagggacggagggagta 28579639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 33745895 - 33745932
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  33745895 ttctcaaaaggatcttataattaggaacggagggagta 33745932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 34568527 - 34568490
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  34568527 ttctcaaaagggtcttataattagggacggagggagta 34568490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 9035551 - 9035579
Alignment:
Q  48 tcttataattagggacggagggagtaatt 76  Q
    |||||||||||||||||||||||||||||    
T  9035551 tcttataattagggacggagggagtaatt 9035579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 19920635 - 19920563
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||||||||||        ||||||||||  ||||||||||||||||||||||||||    
T  19920635 tagcaaaggggtcttataaaaaggaacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 19920563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 20074958 - 20074887
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||||||||||| ||||||||||||||||||||||||||    
T  20074958 caaaggggtcttataaaaagggacaacaaatattctcaaaagaatattataattagggacggagggagtaat 20074887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 34979045 - 34979114
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||| ||||||||||||||||||||||||||    
T  34979045 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagta 34979114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 26255133 - 26255091
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaattaa 78  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  26255133 ttctcaaaagggtcttataattagggacggagggagtaattaa 26255091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 82
Target Start/End: Complemental strand, 39197755 - 39197709
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaattaaaatg 82  Q
    ||||||||||  |||||||||||||||||||||||||||| ||||||    
T  39197755 ttctcaaaagggtcttataattagggacggagggagtaataaaaatg 39197709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 7703820 - 7703857
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  7703820 ttctcaaaagaatcttataattaaggacggagggagta 7703857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 21295220 - 21295151
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  21295220 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 21295151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 25247690 - 25247727
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  25247690 ttctcaaaagagtcttataattagggacggagggagta 25247727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 29177252 - 29177289
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  29177252 ttctcaaaaggatcttataattagggacggagggagta 29177289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 38858367 - 38858298
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  38858367 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 38858298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 39871581 - 39871650
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  39871581 caaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 39871650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 41252329 - 41252398
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  41252329 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 41252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 17317510 - 17317446
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagg 68  Q
    ||||||||||||||||||||| ||        |||||||||| ||||||||||||||||||||||    
T  17317510 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagg 17317446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 40300299 - 40300227
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    ||||||||||||||||||||| ||         |||||||||  |||||||||||||||||||||||||||||    
T  40300299 caaaggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagtaatt 40300227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 9299169 - 9299102
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagg 68  Q
    ||||||||||| |||||||||||| ||        |||||||||| ||||||||||||||||||||||    
T  9299169 tagcaaaggggacttataaaaagggacaaaaaaaattctcaaaagtatcttataattagggacggagg 9299102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19845669 - 19845707
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    |||||||||| |||||||||||||||||||||| |||||    
T  19845669 ttctcaaaaggatcttataattagggacggaggtagtaa 19845707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 6387362 - 6387325
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  6387362 ttctcaaaagagtcttataattagagacggagggagta 6387325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 12930355 - 12930318
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  12930355 ttctcaaaagagtcttataattagggacggaggtagta 12930318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 18751982 - 18752019
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  18751982 ttctcaaaagagtcttataattagggacggaggtagta 18752019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 19292876 - 19292839
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  19292876 ttctcaaaaggatcttataattagggacggaggtagta 19292839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 21119594 - 21119557
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  21119594 ttctcaaaaggatcttataattagggacggaggtagta 21119557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 29286037 - 29286074
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  29286037 ttctcaaaagggtcttataattagggacggagggagta 29286074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 32814470 - 32814433
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  32814470 ttctcaaaagggtcttataattagggacggagggagta 32814433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 32872375 - 32872412
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  32872375 ttctcaaaagggtcttataattagggacggagggagta 32872412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 33858866 - 33858903
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  33858866 ttctcaaaagggtcttataattagggacggagggagta 33858903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 36698131 - 36698168
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  36698131 ttctcaaaagggtcttataattagggacggagggagta 36698168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 41026096 - 41026133
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  41026096 ttctcaaaagggtcttataattagggacggagggagta 41026133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 48521066 - 48521029
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  48521066 ttctcaaaagggtcttataattagggacggagggagta 48521029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 45907507 - 45907547
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaattaaa 79  Q
    ||||||| ||| |||||||||| ||||||||||||||||||    
T  45907507 tcaaaaggatcctataattaggaacggagggagtaattaaa 45907547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 14428678 - 14428602
Alignment:
Q  5 aaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaattaaaat 81  Q
    |||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||||||||||    
T  14428678 aaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagtaattaaaat 14428602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 7051688 - 7051757
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        |||||||||| |||||||||||||||||||||||||||    
T  7051688 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagta 7051757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 7181422 - 7181350
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  7181422 tagcaaaggggtcttataaaaagggacaaaaaaatttctcaaaagggtcttataattagggacggagggagta 7181350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 73
Target Start/End: Complemental strand, 33868515 - 33868448
Alignment:
Q  6 aaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||| ||        |||||||||| |||||||||||||||||||||||||||    
T  33868515 aaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggagggagta 33868448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 20656310 - 20656348
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  20656310 ttctcaaaagaatcttataattaggaacggagggagtaa 20656348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 9499465 - 9499534
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  9499465 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9499534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 22103897 - 22103966
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  22103897 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 22103966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 25149090 - 25149159
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  25149090 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 25149159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 26221325 - 26221288
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26221325 ttctcaaaagagtcttataattagggacggagggagta 26221288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 32963105 - 32963142
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  32963105 ttctcaaaaggatcttataattagggacggagggagta 32963142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 35868051 - 35868120
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  35868051 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 35868120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 37728782 - 37728713
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  37728782 caaaggggtcttataaaaagggacaacaaatattctcaaaagggtcttataattagggacggagggagta 37728713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 44543851 - 44543782
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  44543851 caaaggggtcttataaaaagggacaaaagaaattctcaaaagggtcttataattagggacggagggagta 44543782  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 10220970 - 10220930
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  10220970 ttctcaaaagggtcttataattagggacggagggagtaatt 10220930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 16435236 - 16435276
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    |||||||||| ||||||||||||| ||||||||||||||||    
T  16435236 ttctcaaaaggatcttataattagagacggagggagtaatt 16435276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 21756523 - 21756483
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    ||||||||||  |||||||||||||||||||||||||||||    
T  21756523 ttctcaaaagggtcttataattagggacggagggagtaatt 21756483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 30041017 - 30041056
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  30041017 ttctcaaaagagtcttataattaggaacggagggagtaat 30041056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 33212434 - 33212395
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    |||||||||| |||||||||||||||||||||| ||||||    
T  33212434 ttctcaaaaggatcttataattagggacggaggtagtaat 33212395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 46049986 - 46050025
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  46049986 ttctcaaaagggtcttataattagggacggagggagtaat 46050025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 4024121 - 4024051
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||         |||||||||  |||||||||||||||||||||||||||    
T  4024121 caaaggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagtaa 4024051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 10044876 - 10044842
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||| |||||||||||||||||||||||||||    
T  10044876 tcaaaaggatcttataattagggacggagggagta 10044842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 26593765 - 26593803
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  26593765 ttctcaaaagggtcttataattagggacggagggagtaa 26593803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 32978515 - 32978481
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||| |||||||||||||||||||||||||||    
T  32978515 tcaaaaggatcttataattagggacggagggagta 32978481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 12050392 - 12050429
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  12050392 ttctcaaaagggtcttataattagggacggagggagta 12050429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 21459019 - 21458982
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  21459019 ttctcaaaaggatcttataattagggacggaggtagta 21458982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 27646306 - 27646343
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  27646306 ttctcaaaaggatcttataattagggacggaggtagta 27646343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 28673294 - 28673331
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  28673294 ttctcaaaaggatcttataattagggacggaggtagta 28673331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 36005539 - 36005502
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  36005539 ttctcaaaaaaatcttataattagggacggaggaagta 36005502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 43868140 - 43868103
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  43868140 ttctcaaaagggtcttataattagggacggagggagta 43868103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 45252810 - 45252773
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  45252810 ttctcaaaagggtcttataattagggacggagggagta 45252773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 48887946 - 48887983
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  48887946 ttctcaaaagaatcttataattatggacggaggtagta 48887983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 50517522 - 50517559
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  50517522 ttctcaaaaggatcttataattagggacggaggtagta 50517559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 51284062 - 51284099
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  51284062 ttctcaaaagggtcttataattagggacggagggagta 51284099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 53164200 - 53164163
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  53164200 ttctcaaaaggatcttataattagggacggaggtagta 53164163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 4564271 - 4564235
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaat 75  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  4564271 tcaaaagagtcttataattagggacggaggtagtaat 4564235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 23776495 - 23776531
Alignment:
Q  37 tctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  23776495 tctcaaaaaaatcttataattagggacggaggtagta 23776531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 15190783 - 15190852
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||| ||||||||||||||||||||||||||    
T  15190783 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagagtcttataattagggacggagggagta 15190852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 1266018 - 1265947
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||||    
T  1266018 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaat 1265947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 79
Target Start/End: Complemental strand, 13660930 - 13660855
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaattaaa 79  Q
    ||||||||||||||||||||| ||        |||||||||| ||||||||||||| ||||||||||||| |||||    
T  13660930 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagagacggagggagtagttaaa 13660855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 9828462 - 9828393
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  9828462 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 9828393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 22527761 - 22527692
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  22527761 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 22527692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 40004377 - 40004446
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  40004377 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 40004446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 41384172 - 41384209
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  41384172 ttctcaaaaggatcttataattagggacggagggagta 41384209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 41641164 - 41641095
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        |||||||||  |||||||||||||||||||||||||||    
T  41641164 caaaggggtcttataaaaagggacaaaaaaaattctcaaaatgatcttataattagggacggagggagta 41641095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 2106865 - 2106829
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaat 75  Q
    |||||||||||||||||||| ||||||||||||||||    
T  2106865 tcaaaagaatcttataattatggacggagggagtaat 2106829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 3686754 - 3686791
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||| ||||||    
T  3686754 ttctcaaaagagtcttataattagggacggaaggagta 3686791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 6673228 - 6673265
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  6673228 ttctcaaaagggtcttataattagggacggagggagta 6673265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 7951598 - 7951561
Alignment:
Q  37 tctcaaaagaatcttataattagggacggagggagtaa 74  Q
    |||||||||  |||||||||||||||||||||||||||    
T  7951598 tctcaaaagggtcttataattagggacggagggagtaa 7951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 14913685 - 14913648
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  14913685 ttctcaaaagggtcttataattagggacggagggagta 14913648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 16127296 - 16127259
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  16127296 ttctcaaaagggtcttataattagggacggagggagta 16127259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 22657805 - 22657768
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  22657805 ttctcaaaaggatcttataattagggacggaggtagta 22657768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 26894873 - 26894910
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  26894873 ttctcaaaagggtcttataattagggacggagggagta 26894910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 34662273 - 34662204
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||         |||||||||  ||||||||||||||||||||||||||    
T  34662273 caaaggggtcttataaaaagggacaaaaaaaactctcaaaagggtcttataattagggacggagggagta 34662204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 35547298 - 35547261
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||| ||||||||||||||||||||||| ||||    
T  35547298 ttctcaaaaaaatcttataattagggacggaggtagta 35547261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 40643131 - 40643094
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  40643131 ttctcaaaaggatcttataattagggacggaggtagta 40643094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 41383945 - 41383912
Alignment:
Q  40 caaaagaatcttataattagggacggagggagta 73  Q
    |||||| |||||||||||||||||||||||||||    
T  41383945 caaaaggatcttataattagggacggagggagta 41383912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 10734526 - 10734562
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaat 75  Q
    |||||||  ||||||||||||||||||||||||||||    
T  10734526 tcaaaagggtcttataattagggacggagggagtaat 10734562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 81
Target Start/End: Original strand, 19571940 - 19571984
Alignment:
Q  37 tctcaaaagaatcttataattagggacggagggagtaattaaaat 81  Q
    |||||||||  ||||||||||||||||||||| |||||| |||||    
T  19571940 tctcaaaagggtcttataattagggacggaggtagtaataaaaat 19571984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 37842247 - 37842171
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaatta 77  Q
    |||||||||||||||||||||||| ||        || |||||||| ||||||||||||||||||||||| ||||||    
T  37842247 tagcaaaggggtcttataaaaagggacaaaaaaaattatcaaaagagtcttataattagggacggagggaataatta 37842171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 55632227 - 55632299
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    ||||||||||||||||||||| ||        |||||||||| ||||||||||||| ||||||||||||||||    
T  55632227 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagagacggagggagtaatt 55632299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 47806929 - 47806858
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||||    
T  47806929 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaat 47806858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 49373658 - 49373737
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaattaaaa 80  Q
    ||||||||||||||||||||||||  |        ||||||||||  ||||||||||||||||||||| |||||||||||    
T  49373658 tagcaaaggggtcttataaaaagggccaaaaaaaattctcaaaagggtcttataattagggacggaggtagtaattaaaa 49373737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 4549857 - 4549923
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggaggga 70  Q
    |||| |||||||||||||||||||        ||||||||||| |||||||||||||||||||||||    
T  4549857 caaaagggtcttataaaaaggaacaaaaaaaattctcaaaagagtcttataattagggacggaggga 4549923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 5743627 - 5743697
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        ||||||||||  |||||||||||||||||||||||||||    
T  5743627 caaaggggtcttataaaaagggacaaatttttttctcaaaagggtcttataattagggacggagggagtaa 5743697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 15241517 - 15241479
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  15241517 ttctcaaaagagtcttataattagggacggagggagtaa 15241479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 34273187 - 34273257
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        ||||||||||  |||||||||||||||||||||||||||    
T  34273187 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaa 34273257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 50352133 - 50352063
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        |||||||||| ||||||||||||| ||||||||||||||    
T  50352133 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagagacggagggagtaa 50352063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 4035894 - 4035825
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  4035894 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 4035825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 5375525 - 5375594
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  5375525 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 5375594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 6753562 - 6753525
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  6753562 ttctcaaaaggatcttataattagggacggagggagta 6753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 17610020 - 17610057
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  17610020 ttctcaaaaggatcttataattagggacggagggagta 17610057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 24754115 - 24754078
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  24754115 ttctcaaaaggatcttataattagggacggagggagta 24754078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 39144473 - 39144404
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||| |||||||||||||||||        |||| ||||| |||||||||||||||||||||||||||    
T  39144473 caaaggagtcttataaaaaggaacaaaaaaaattcttaaaaggatcttataattagggacggagggagta 39144404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 77
Target Start/End: Original strand, 43387961 - 43388034
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaatta 77  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||| ||||||||    
T  43387961 caaaggggtcttataaaaagggacaaaagaaattctcaaaagggtcttataattagggacggaggaagtaatta 43388034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 6462691 - 6462727
Alignment:
Q  37 tctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||||||||||||||| ||||    
T  6462691 tctcaaaagaatcttataattagggacggaggtagta 6462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 26625967 - 26626039
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||||||| ||         |||||||||  ||||||||||||||||||||||||||    
T  26625967 tagcaaaggggtcttataaaaagggacaaaaaaaaatctcaaaagggtcttataattagggacggagggagta 26626039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 35675923 - 35675963
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaattaaa 79  Q
    |||||||  ||||||||||||||||||||||||||||||||    
T  35675923 tcaaaagggtcttataattagggacggagggagtaattaaa 35675963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 30771565 - 30771526
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  30771565 ttctcaaaagggtcttataattagggacggagggagtaat 30771526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 52978019 - 52977980
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  52978019 ttctcaaaagggtcttataattagggacggagggagtaat 52977980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 4455130 - 4455060
Alignment:
Q  4 caaaggggtcttataaaaagg-aacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| |||        ||||||||||| ||||||||||||||||||| ||||||    
T  4455130 caaaggggtcttataaaaagggaacaaaaaaaattctcaaaagagtcttataattagggacggatggagta 4455060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 19282081 - 19282119
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    |||||||||| |||||||||||||||||| |||||||||    
T  19282081 ttctcaaaaggatcttataattagggacgtagggagtaa 19282119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 70
Target Start/End: Complemental strand, 20747207 - 20747173
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggaggga 70  Q
    |||||||| ||||||||||||||||||||||||||    
T  20747207 ttctcaaaggaatcttataattagggacggaggga 20747173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 50533921 - 50533879
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaattaa 78  Q
    |||||||||  ||||||||||||||||||||||||||| ||||    
T  50533921 ttctcaaaatgatcttataattagggacggagggagtagttaa 50533879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 9328240 - 9328277
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  9328240 ttctcaaaagggtcttataattagggacggagggagta 9328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 10588112 - 10588075
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| || ||||||||||||||||||||||||    
T  10588112 ttctcaaaaggatgttataattagggacggagggagta 10588075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 28298371 - 28298408
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  28298371 ttctcaaaaggatcttataattagggacggaggtagta 28298408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 32032993 - 32033030
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  32032993 ttctcaaaagggtcttataattagggacggagggagta 32033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 33413555 - 33413518
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  33413555 ttctcaaaagggtcttataattagggacggagggagta 33413518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 44294826 - 44294789
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  44294826 ttctcaaaagggtcttataattagggacggagggagta 44294789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 45742806 - 45742843
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  45742806 ttctcaaaagggtcttataattagggacggagggagta 45742843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 66
Target Start/End: Original strand, 49490169 - 49490198
Alignment:
Q  37 tctcaaaagaatcttataattagggacgga 66  Q
    ||||||||||||||||||||||||||||||    
T  49490169 tctcaaaagaatcttataattagggacgga 49490198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 36901111 - 36901147
Alignment:
Q  37 tctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||| |||||||||||||||||||||| ||||    
T  36901111 tctcaaaaggatcttataattagggacggaggtagta 36901147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Complemental strand, 54623838 - 54623806
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagg 68  Q
    |||||||||| ||||||||||||||||||||||    
T  54623838 ttctcaaaaggatcttataattagggacggagg 54623806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 4102679 - 4102751
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  4102679 tagcaaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 4102751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Original strand, 15811200 - 15811271
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||||    
T  15811200 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaat 15811271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 75
Target Start/End: Complemental strand, 49907090 - 49907019
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||||    
T  49907090 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaat 49907019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 1039349 - 1039418
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  1039349 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1039418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 1046255 - 1046324
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  1046255 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 1046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 11741466 - 11741397
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  11741466 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 11741397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 16576060 - 16576129
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        || |||||||| ||||||||||||||||||||||||||    
T  16576060 caaaggggtcttataaaaagggacaaaaaaaattatcaaaagagtcttataattagggacggagggagta 16576129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 23542048 - 23541979
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  23542048 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 23541979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 36694923 - 36694854
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  36694923 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 36694854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 36711024 - 36710955
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  36711024 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 36710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 37951917 - 37951986
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  37951917 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 37951986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 39497502 - 39497433
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  39497502 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 39497433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 45039481 - 45039412
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  45039481 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 45039412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 52431142 - 52431211
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  52431142 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagta 52431211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 943637 - 943676
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  943637 ttctcaaaagggtcttataattagggacggagggagtaat 943676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 30289831 - 30289898
Alignment:
Q  5 aaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagt 72  Q
    |||||||||||||||||||| ||        ||||||||||  |||||||||||||||||||||||||    
T  30289831 aaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagt 30289898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 30290302 - 30290263
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  30290302 ttctcaaaagggtcttataattagggacggagggagtaat 30290263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 39363194 - 39363233
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  39363194 ttctcaaaagggtcttataattagggacggagggagtaat 39363233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 44649666 - 44649627
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  44649666 ttctcaaaagggtcttataattagggacggagggagtaat 44649627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 7784258 - 7784291
Alignment:
Q  40 caaaagaatcttataattagggacggagggagta 73  Q
    ||||||| ||||||||||||||||||||||||||    
T  7784258 caaaagagtcttataattagggacggagggagta 7784291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 18237131 - 18237094
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  18237131 ttctcaaaagagtcttataattagggacggaggtagta 18237094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 22567103 - 22567066
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  22567103 ttctcaaaaggatcttataattagggacggaggtagta 22567066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 30289635 - 30289602
Alignment:
Q  40 caaaagaatcttataattagggacggagggagta 73  Q
    ||||||| ||||||||||||||||||||||||||    
T  30289635 caaaagagtcttataattagggacggagggagta 30289602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 68
Target Start/End: Complemental strand, 34503269 - 34503240
Alignment:
Q  39 tcaaaagaatcttataattagggacggagg 68  Q
    ||||||||||||||||||||||||||||||    
T  34503269 tcaaaagaatcttataattagggacggagg 34503240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 46075867 - 46075904
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  46075867 ttctcaaaagggtcttataattagggacggagggagta 46075904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 50008012 - 50007975
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| |||||||||||||||| |||||||||    
T  50008012 ttctcaaaagagtcttataattagggacagagggagta 50007975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 50008483 - 50008520
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||  |||||||||||||||||||||||||||    
T  50008483 ttctcaaaatgatcttataattagggacggagggagta 50008520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 50246929 - 50246966
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  50246929 ttctcaaaaggatcttataattacggacggagggagta 50246966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 14171579 - 14171539
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    ||||||||||  |||||||||||| ||||||||||||||||    
T  14171579 ttctcaaaagggtcttataattagagacggagggagtaatt 14171539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 33336838 - 33336798
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    ||||||||||||||||||| |||| |||||||| |||||||    
T  33336838 ttctcaaaagaatcttatatttagagacggaggtagtaatt 33336798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 44646543 - 44646571
Alignment:
Q  48 tcttataattagggacggagggagtaatt 76  Q
    |||||||||||||||||||||||||||||    
T  44646543 tcttataattagggacggagggagtaatt 44646571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 76
Target Start/End: Original strand, 44649901 - 44649929
Alignment:
Q  48 tcttataattagggacggagggagtaatt 76  Q
    |||||||||||||||||||||||||||||    
T  44649901 tcttataattagggacggagggagtaatt 44649929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 45285810 - 45285842
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagg 68  Q
    ||||||||||| |||||||||||||||||||||    
T  45285810 ttctcaaaagagtcttataattagggacggagg 45285842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 25024509 - 25024544
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||||||||||||||||||    
T  25024509 tcaaaagaatcttataattagggacggagggagtaa 25024544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 34301800 - 34301870
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        ||||||||||  |||||||||||||||||||||||||||    
T  34301800 caaaggggtcttataaaaagggacaaaaaaaattctcaaaagggtcttataattagggacggagggagtaa 34301870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 25197189 - 25197152
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||||||||    
T  25197189 ttctcaaaaggatcttataattagggacggagggagta 25197152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 925898 - 925973
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaatt 76  Q
    |||||||||| ||||||||||||| ||        ||||||||||  ||||||||||||| |||||||||||||||    
T  925898 tagcaaagggatcttataaaaagggacaaaaaaaattctcaaaagggtcttataattaggaacggagggagtaatt 925973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 29036163 - 29036124
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaat 75  Q
    |||||||||| |||||||||||||| ||||||||||||||    
T  29036163 ttctcaaaaggatcttataattaggaacggagggagtaat 29036124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 231105 - 231143
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  231105 ttctcaaaagggtcttataattagggacggagggagtaa 231143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 73
Target Start/End: Original strand, 1730104 - 1730138
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||| |||||||||||||||||||||||||||    
T  1730104 tcaaaaggatcttataattagggacggagggagta 1730138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 1779817 - 1779784
Alignment:
Q  40 caaaagaatcttataattagggacggagggagta 73  Q
    |||||| |||||||||||||||||||||||||||    
T  1779817 caaaaggatcttataattagggacggagggagta 1779784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 4844437 - 4844400
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  4844437 ttctcaaaagggtcttataattagggacggagggagta 4844400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 7772213 - 7772176
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  7772213 ttctcaaaagagtcttataattagggacggaggtagta 7772176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 8743225 - 8743188
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  8743225 ttctcaaaagggtcttataattagggacggagggagta 8743188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 9341875 - 9341838
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  9341875 ttctcaaaaggatcttataattagggacggaggtagta 9341838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 30248684 - 30248647
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  30248684 ttctcaaaagggtcttataattagggacggagggagta 30248647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 11847835 - 11847871
Alignment:
Q  39 tcaaaagaatcttataattagggacggagggagtaat 75  Q
    |||||||  ||||||||||||||||||||||||||||    
T  11847835 tcaaaagggtcttataattagggacggagggagtaat 11847871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 74
Target Start/End: Complemental strand, 117915 - 117845
Alignment:
Q  4 caaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagtaa 74  Q
    ||||||||||||||||||||| ||        |||||||||| |||||||||||||||||||||| |||||    
T  117915 caaaggggtcttataaaaagggacaaaaaaaattctcaaaaggatcttataattagggacggaggaagtaa 117845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 4663 - 4700
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  4663 ttctcaaaagaatcttataattagggacggaggtagta 4700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 3748 - 3819
Alignment:
Q  1 tagcaaaggggtcttataaaaaggaacnnnnnnnnttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||||||||||||||||| ||        ||||||||||  ||||||||||||||||||||||||||    
T  3748 tagcaaaggggtcttataaaaagggacaaaaaaa-ttctcaaaagggtcttataattagggacggagggagta 3819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 9426 - 9463
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  9426 ttctcaaaaggatcttataattagggacggaggtagta 9463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 12102 - 12065
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  12102 ttctcaaaagggtcttataattagggacggagggagta 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 24630 - 24667
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  24630 ttctcaaaaggatcttataattaggaacggagggagta 24667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 51682 - 51719
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  51682 ttctcaaaagggtcttataattagggacggagggagta 51719  T

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Target: scaffold0012 (Bit Score: 30; Significance: 0.00000008; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 47677 - 47640
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  47677 ttctcaaaagggtcttataattagggacggagggagta 47640  T

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Target: scaffold0012; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 73
Target Start/End: Original strand, 47904 - 47937
Alignment:
Q  40 caaaagaatcttataattagggacggagggagta 73  Q
    |||||| |||||||||||||||||||||||||||    
T  47904 caaaaggatcttataattagggacggagggagta 47937  T

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Target: scaffold0008 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 259122 - 259159
Alignment:
Q  36 ttctcaaaagaatcttataattagggacggagggagta 73  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  259122 ttctcaaaagggtcttataattagggacggagggagta 259159  T

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