View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4262_high_2 (Length: 394)
Name: NF4262_high_2
Description: NF4262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4262_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 43 - 379
Target Start/End: Original strand, 32640788 - 32641124
Alignment:
| Q |
43 |
tgtagtaacacctttgttaaaatatggatagatttggaatatatttggatgtagtccggctggttttgtggaatggaagccatacatgccctcggatatc |
142 |
Q |
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| T |
32640788 |
tgtagttacacctttgttaaaatatggatagatttggaatatatttggatgtagtccggctggttttgtggaatggaagccatacatgccctcggatatc |
32640887 |
T |
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| Q |
143 |
ccaatagagacaaagaaattgtatccaaaaagtctctaatacaaattaatatattgacgatccggttgcacttcttcattgtaggggactcaaattaaca |
242 |
Q |
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| T |
32640888 |
ccaatagagacaaagaaattgtatccaaaaagtctctaatacaaattaatatatttacgatccggttgcacttcttcattgtaggggactcaaattaaca |
32640987 |
T |
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| Q |
243 |
ctagttgacgacgttagttccacataacaatttgatcttgaaatttggttctcaatgataccctccctacgatcctcagagtgatcttattgagatcctg |
342 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
32640988 |
ctagttgacgacgttagttccacataacaatttgatcttgaaatttggttctcaatgataccctccctacgatcctcaaagtgatcttattgagatcctg |
32641087 |
T |
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| Q |
343 |
caaacaacgtggtttggctagtgggtactgaagaaaa |
379 |
Q |
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|||||||||||||||||||||| |||||||||||||| |
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| T |
32641088 |
caaacaacgtggtttggctagtcggtactgaagaaaa |
32641124 |
T |
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