View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4262_low_2 (Length: 561)

Name: NF4262_low_2
Description: NF4262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4262_low_2
NF4262_low_2
[»] chr2 (48 HSPs)
chr2 (1-550)||(38191146-38191696)
chr2 (1-199)||(27517491-27517687)
chr2 (1-200)||(2736338-2736537)
chr2 (1-200)||(20054609-20054813)
chr2 (1-200)||(37170606-37170800)
chr2 (13-199)||(22712374-22712565)
chr2 (1-199)||(17943669-17943867)
chr2 (1-199)||(20049866-20050070)
chr2 (1-199)||(33670817-33671015)
chr2 (1-187)||(2741074-2741260)
chr2 (13-200)||(22717082-22717274)
chr2 (1-197)||(30479128-30479322)
chr2 (1-200)||(45679856-45680055)
chr2 (1-197)||(12781075-12781269)
chr2 (1-200)||(39680178-39680378)
chr2 (1-200)||(17462569-17462768)
chr2 (101-199)||(39687221-39687321)
chr2 (1-62)||(39687116-39687178)
chr2 (3-88)||(28458789-28458874)
chr2 (1-64)||(34575121-34575184)
chr2 (1-64)||(40699583-40699647)
chr2 (1-64)||(31732761-31732823)
chr2 (1-68)||(42064722-42064789)
chr2 (1-88)||(5375307-5375393)
chr2 (2-52)||(8173539-8173589)
chr2 (145-200)||(28458692-28458751)
chr2 (1-74)||(3022380-3022453)
chr2 (1-53)||(36558860-36558911)
chr2 (1-53)||(36561137-36561188)
chr2 (147-200)||(42923292-42923346)
chr2 (147-200)||(42923350-42923404)
chr2 (1-56)||(1345587-1345641)
chr2 (1-56)||(2838076-2838130)
chr2 (1-73)||(6264123-6264195)
chr2 (1-55)||(28196845-28196896)
chr2 (1-55)||(11739553-11739606)
chr2 (1-55)||(13910039-13910092)
chr2 (1-55)||(19502005-19502058)
chr2 (3-64)||(20592288-20592350)
chr2 (1-55)||(23452231-23452284)
chr2 (1-55)||(27105005-27105058)
chr2 (1-51)||(35215584-35215633)
chr2 (1-51)||(35217961-35218010)
chr2 (1-51)||(45332179-45332228)
chr2 (1-49)||(13569332-13569379)
chr2 (1-49)||(14699053-14699100)
chr2 (1-64)||(17897229-17897292)
chr2 (1-49)||(20522224-20522271)
[»] chr8 (45 HSPs)
chr8 (1-199)||(23179410-23179609)
chr8 (1-200)||(17799277-17799472)
chr8 (1-200)||(28890899-28891096)
chr8 (1-200)||(28895636-28895833)
chr8 (1-200)||(9020956-9021155)
chr8 (24-199)||(3276455-3276626)
chr8 (1-181)||(21034003-21034181)
chr8 (1-199)||(26268084-26268280)
chr8 (1-199)||(25684776-25684972)
chr8 (4-199)||(590931-591126)
chr8 (1-200)||(28328041-28328240)
chr8 (1-199)||(30423349-30423541)
chr8 (1-199)||(28332764-28332962)
chr8 (1-196)||(4812336-4812536)
chr8 (10-199)||(16752374-16752563)
chr8 (1-200)||(16757109-16757316)
chr8 (1-187)||(33032788-33032971)
chr8 (101-199)||(29554705-29554803)
chr8 (128-200)||(4823550-4823622)
chr8 (1-63)||(3005616-3005678)
chr8 (3-79)||(31162502-31162579)
chr8 (145-197)||(28228790-28228842)
chr8 (108-202)||(2266933-2267026)
chr8 (1-63)||(13858469-13858531)
chr8 (1-52)||(15072999-15073049)
chr8 (1-64)||(31035406-31035472)
chr8 (5-52)||(31566554-31566601)
chr8 (1-52)||(31578273-31578324)
chr8 (1-52)||(43079890-43079940)
chr8 (1-52)||(43082261-43082311)
chr8 (1-55)||(3874298-3874351)
chr8 (1-55)||(4424306-4424359)
chr8 (1-55)||(14419184-14419237)
chr8 (1-55)||(27829584-27829637)
chr8 (1-31)||(29554803-29554833)
chr8 (1-55)||(30480497-30480550)
chr8 (1-55)||(32339597-32339650)
chr8 (200-229)||(29096956-29096985)
chr8 (1-79)||(41382950-41383028)
chr8 (1-64)||(6376277-6376341)
chr8 (1-49)||(9765865-9765912)
chr8 (3-55)||(14808051-14808102)
chr8 (1-64)||(21482599-21482662)
chr8 (1-49)||(26403276-26403323)
chr8 (147-192)||(36865976-36866023)
[»] chr5 (53 HSPs)
chr5 (1-200)||(42238394-42238589)
chr5 (1-199)||(22672968-22673163)
chr5 (1-197)||(28786538-28786728)
chr5 (1-193)||(17841110-17841297)
chr5 (1-199)||(11962287-11962481)
chr5 (11-199)||(16093144-16093330)
chr5 (1-207)||(35385295-35385500)
chr5 (1-177)||(25445630-25445803)
chr5 (1-177)||(25452629-25452802)
chr5 (1-199)||(1240562-1240760)
chr5 (3-200)||(40222901-40223098)
chr5 (1-200)||(10627500-10627696)
chr5 (1-199)||(2297849-2298049)
chr5 (1-199)||(1170944-1171142)
chr5 (101-199)||(20437149-20437249)
chr5 (1-200)||(31782310-31782503)
chr5 (1-181)||(26406340-26406514)
chr5 (1-55)||(10757408-10757461)
chr5 (1-60)||(21288993-21289051)
chr5 (1-55)||(4410254-4410307)
chr5 (1-55)||(10749932-10749985)
chr5 (1-67)||(18466916-18466981)
chr5 (1-62)||(31179358-31179418)
chr5 (1-74)||(2724125-2724198)
chr5 (1-53)||(15354571-15354622)
chr5 (147-200)||(37705625-37705680)
chr5 (1-52)||(3373134-3373184)
chr5 (1-52)||(15552477-15552527)
chr5 (1-52)||(31542966-31543016)
chr5 (1-52)||(31545312-31545362)
chr5 (1-55)||(2175150-2175203)
chr5 (1-55)||(10529093-10529146)
chr5 (1-55)||(20043222-20043275)
chr5 (1-55)||(24127088-24127141)
chr5 (1-55)||(25921467-25921520)
chr5 (1-55)||(27912768-27912821)
chr5 (1-55)||(34479412-34479465)
chr5 (1-65)||(6661167-6661232)
chr5 (140-181)||(34033438-34033479)
chr5 (1-54)||(34477048-34477100)
chr5 (4-73)||(37705757-37705824)
chr5 (1-73)||(40221755-40221827)
chr5 (1-49)||(9353378-9353425)
chr5 (1-64)||(15143699-15143763)
chr5 (1-53)||(15356847-15356898)
chr5 (1-49)||(17004006-17004053)
chr5 (1-53)||(21684448-21684499)
chr5 (1-53)||(23665275-23665326)
chr5 (1-53)||(23741855-23741906)
chr5 (1-53)||(23793261-23793312)
chr5 (200-240)||(28322240-28322280)
chr5 (1-49)||(36932396-36932443)
chr5 (1-49)||(42127456-42127503)
[»] chr3 (64 HSPs)
chr3 (1-200)||(11079651-11079846)
chr3 (1-200)||(10897139-10897337)
chr3 (1-199)||(10949115-10949308)
chr3 (1-193)||(47878033-47878219)
chr3 (1-200)||(47882737-47882930)
chr3 (1-200)||(20031169-20031365)
chr3 (2-200)||(27761839-27762033)
chr3 (1-199)||(48390152-48390350)
chr3 (1-199)||(4535748-4535946)
chr3 (1-199)||(3330027-3330221)
chr3 (1-199)||(5858678-5858874)
chr3 (1-199)||(54193360-54193557)
chr3 (1-199)||(10594883-10595082)
chr3 (1-200)||(10612626-10612826)
chr3 (4-199)||(38003006-38003195)
chr3 (1-199)||(10200805-10201003)
chr3 (1-200)||(29913804-29914003)
chr3 (1-200)||(6303443-6303643)
chr3 (1-199)||(10093923-10094123)
chr3 (1-200)||(54188643-54188842)
chr3 (1-200)||(22625828-22626032)
chr3 (101-200)||(10099923-10100023)
chr3 (1-187)||(7418198-7418378)
chr3 (101-199)||(27544521-27544619)
chr3 (13-167)||(16462336-16462495)
chr3 (3-198)||(13893600-13893789)
chr3 (101-200)||(29897526-29897627)
chr3 (1-60)||(10100080-10100140)
chr3 (1-60)||(10207989-10208049)
chr3 (1-51)||(27544406-27544456)
chr3 (1-52)||(1674176-1674227)
chr3 (1-79)||(43226297-43226373)
chr3 (1-64)||(36871282-36871346)
chr3 (1-60)||(28761414-28761473)
chr3 (1-55)||(53917656-53917709)
chr3 (1-52)||(746969-747019)
chr3 (141-200)||(27420998-27421056)
chr3 (1-55)||(1313621-1313674)
chr3 (1-55)||(1321691-1321744)
chr3 (1-55)||(3859739-3859792)
chr3 (1-55)||(5886410-5886463)
chr3 (1-55)||(5899883-5899936)
chr3 (1-55)||(6484572-6484625)
chr3 (1-55)||(7606580-7606633)
chr3 (1-55)||(9604599-9604652)
chr3 (1-55)||(10958315-10958368)
chr3 (1-55)||(27635650-27635703)
chr3 (1-64)||(31151556-31151621)
chr3 (1-55)||(35919107-35919160)
chr3 (1-55)||(41849271-41849324)
chr3 (1-55)||(42990516-42990569)
chr3 (1-55)||(43421407-43421460)
chr3 (1-51)||(50494211-50494260)
chr3 (1-65)||(5926745-5926809)
chr3 (1-49)||(1417526-1417573)
chr3 (1-49)||(1736341-1736388)
chr3 (1-49)||(8370522-8370569)
chr3 (140-200)||(14634290-14634350)
chr3 (1-49)||(18552919-18552966)
chr3 (1-49)||(21711227-21711274)
chr3 (1-49)||(27974988-27975035)
chr3 (1-49)||(27986482-27986529)
chr3 (1-49)||(30709826-30709873)
chr3 (1-53)||(53894051-53894102)
[»] chr4 (66 HSPs)
chr4 (1-200)||(4570228-4570421)
chr4 (1-201)||(4885008-4885204)
chr4 (1-200)||(18587100-18587299)
chr4 (1-199)||(4555915-4556108)
chr4 (1-200)||(16688793-16688988)
chr4 (1-201)||(8529401-8529602)
chr4 (1-200)||(4558445-4558640)
chr4 (1-194)||(36769613-36769803)
chr4 (1-199)||(36771530-36771725)
chr4 (4-200)||(15312453-15312650)
chr4 (1-199)||(15317092-15317290)
chr4 (9-201)||(47566636-47566823)
chr4 (1-200)||(7050124-7050305)
chr4 (1-199)||(15831275-15831478)
chr4 (1-199)||(16489483-16489681)
chr4 (1-200)||(55822398-55822592)
chr4 (101-200)||(11853797-11853898)
chr4 (1-88)||(31300558-31300645)
chr4 (1-199)||(25613810-25614004)
chr4 (1-60)||(11853682-11853742)
chr4 (480-550)||(16187269-16187339)
chr4 (1-64)||(16455528-16455590)
chr4 (3-80)||(14789397-14789473)
chr4 (4-52)||(3578668-3578716)
chr4 (1-64)||(16185818-16185882)
chr4 (5-88)||(16638965-16639048)
chr4 (145-200)||(31300677-31300733)
chr4 (124-199)||(4874336-4874410)
chr4 (1-55)||(9148538-9148591)
chr4 (3-88)||(16631319-16631404)
chr4 (1-55)||(19322980-19323034)
chr4 (1-59)||(25357928-25357986)
chr4 (3-64)||(28453971-28454033)
chr4 (145-199)||(32273806-32273860)
chr4 (3-80)||(14787398-14787474)
chr4 (1-79)||(24879276-24879354)
chr4 (1-79)||(24880738-24880816)
chr4 (1-64)||(10114603-10114667)
chr4 (1-65)||(4215592-4215657)
chr4 (1-69)||(7941609-7941678)
chr4 (1-52)||(16931786-16931836)
chr4 (1-52)||(16934140-16934190)
chr4 (1-52)||(18537470-18537521)
chr4 (1-52)||(18709161-18709211)
chr4 (1-52)||(26557871-26557922)
chr4 (1-52)||(36378579-36378629)
chr4 (1-55)||(5635470-5635523)
chr4 (1-55)||(6765130-6765183)
chr4 (1-55)||(8631413-8631466)
chr4 (3-64)||(9864000-9864062)
chr4 (119-200)||(16639075-16639155)
chr4 (1-55)||(17662239-17662292)
chr4 (1-51)||(22780371-22780420)
chr4 (1-55)||(22800856-22800909)
chr4 (1-55)||(24889082-24889135)
chr4 (1-55)||(36380636-36380689)
chr4 (1-55)||(37089366-37089419)
chr4 (1-55)||(38928171-38928224)
chr4 (1-55)||(40637360-40637413)
chr4 (1-51)||(44599836-44599885)
chr4 (1-73)||(22295451-22295523)
chr4 (1-49)||(10047383-10047430)
chr4 (117-200)||(16631430-16631512)
chr4 (1-55)||(31849593-31849646)
chr4 (1-64)||(38890208-38890272)
chr4 (1-49)||(39245998-39246045)
[»] chr6 (51 HSPs)
chr6 (1-200)||(25941803-25942001)
chr6 (1-200)||(22351703-22351900)
chr6 (1-199)||(25465754-25465947)
chr6 (1-199)||(3577338-3577537)
chr6 (1-203)||(22342648-22342849)
chr6 (1-200)||(33215961-33216160)
chr6 (1-187)||(12166010-12166194)
chr6 (1-200)||(17694700-17694900)
chr6 (1-199)||(13883608-13883806)
chr6 (1-199)||(13467318-13467514)
chr6 (5-196)||(26643312-26643497)
chr6 (5-196)||(26749278-26749463)
chr6 (101-199)||(31248544-31248643)
chr6 (1-183)||(17038368-17038551)
chr6 (101-200)||(16786166-16786265)
chr6 (5-200)||(26887076-26887271)
chr6 (101-199)||(30987356-30987454)
chr6 (101-200)||(13878970-13879071)
chr6 (1-197)||(17065986-17066179)
chr6 (101-200)||(35201156-35201255)
chr6 (101-200)||(19701756-19701856)
chr6 (122-200)||(5165692-5165772)
chr6 (1-62)||(13878860-13878922)
chr6 (1-62)||(16786052-16786114)
chr6 (1-64)||(35201311-35201375)
chr6 (1-64)||(11262726-11262790)
chr6 (1-64)||(19696708-19696772)
chr6 (1-64)||(22857936-22858000)
chr6 (3-62)||(31248701-31248761)
chr6 (1-44)||(5165818-5165861)
chr6 (1-59)||(30443555-30443613)
chr6 (122-155)||(5165772-5165805)
chr6 (147-200)||(10584359-10584414)
chr6 (1-64)||(15346614-15346677)
chr6 (4-52)||(17012310-17012358)
chr6 (1-53)||(29754705-29754756)
chr6 (1-52)||(16455421-16455472)
chr6 (1-52)||(26932559-26932609)
chr6 (1-52)||(33309123-33309173)
chr6 (1-55)||(1230243-1230296)
chr6 (1-55)||(4816225-4816278)
chr6 (1-59)||(7294062-7294120)
chr6 (1-55)||(11983023-11983076)
chr6 (1-55)||(13040022-13040075)
chr6 (1-55)||(14458761-14458814)
chr6 (1-55)||(14507170-14507223)
chr6 (1-62)||(20915342-20915403)
chr6 (1-65)||(28078177-28078242)
chr6 (1-49)||(5757524-5757571)
chr6 (1-49)||(12195515-12195562)
chr6 (1-64)||(25465574-25465638)
[»] chr7 (66 HSPs)
chr7 (1-200)||(44016513-44016709)
chr7 (1-199)||(44143722-44143914)
chr7 (4-200)||(25351488-25351684)
chr7 (1-200)||(7464364-7464567)
chr7 (1-197)||(34546734-34546928)
chr7 (1-199)||(8378357-8378552)
chr7 (1-200)||(44010602-44010798)
chr7 (1-201)||(2075249-2075438)
chr7 (1-199)||(30247104-30247303)
chr7 (1-199)||(2121033-2121229)
chr7 (1-200)||(42006797-42006993)
chr7 (4-200)||(25357182-25357379)
chr7 (101-200)||(7070028-7070127)
chr7 (101-200)||(25405646-25405746)
chr7 (1-200)||(15540843-15541044)
chr7 (1-197)||(25410264-25410463)
chr7 (101-199)||(7075029-7075127)
chr7 (101-200)||(3324636-3324737)
chr7 (101-199)||(3319869-3319969)
chr7 (1-197)||(21369776-21369970)
chr7 (1-88)||(44512483-44512573)
chr7 (1-64)||(3320035-3320099)
chr7 (1-64)||(3324783-3324847)
chr7 (1-62)||(25405526-25405588)
chr7 (1-51)||(7069913-7069963)
chr7 (5-62)||(7074924-7074982)
chr7 (141-200)||(44512362-44512423)
chr7 (1-64)||(11081752-11081816)
chr7 (1-79)||(24813467-24813545)
chr7 (1-54)||(6067193-6067246)
chr7 (4-64)||(6332466-6332527)
chr7 (1-79)||(13099443-13099521)
chr7 (1-62)||(2935510-2935572)
chr7 (1-49)||(9190054-9190101)
chr7 (8-64)||(20091140-20091196)
chr7 (1-53)||(22108308-22108359)
chr7 (1-53)||(22137319-22137370)
chr7 (147-200)||(24748981-24749036)
chr7 (1-49)||(28617271-28617318)
chr7 (1-53)||(40550068-40550119)
chr7 (1-53)||(40552346-40552397)
chr7 (1-52)||(9027191-9027241)
chr7 (1-64)||(27306215-27306277)
chr7 (1-52)||(31155908-31155958)
chr7 (1-68)||(40946570-40946636)
chr7 (103-200)||(45366817-45366912)
chr7 (1-55)||(1049290-1049343)
chr7 (1-55)||(3035966-3036019)
chr7 (1-55)||(7471974-7472027)
chr7 (1-55)||(11759369-11759422)
chr7 (147-200)||(18345937-18345990)
chr7 (1-55)||(20299702-20299755)
chr7 (1-55)||(20626280-20626333)
chr7 (1-55)||(20630171-20630224)
chr7 (1-55)||(20642590-20642643)
chr7 (1-55)||(38394228-38394281)
chr7 (1-55)||(40836737-40836790)
chr7 (1-55)||(44724821-44724874)
chr7 (1-55)||(48457895-48457948)
chr7 (1-62)||(1606621-1606683)
chr7 (1-49)||(2580394-2580441)
chr7 (5-64)||(13290457-13290517)
chr7 (1-49)||(20284093-20284140)
chr7 (1-49)||(21983288-21983335)
chr7 (1-49)||(33332496-33332543)
chr7 (1-64)||(40281366-40281430)
[»] chr1 (51 HSPs)
chr1 (3-200)||(2401073-2401267)
chr1 (1-193)||(4144543-4144731)
chr1 (1-200)||(2393132-2393330)
chr1 (4-200)||(25134208-25134400)
chr1 (1-200)||(9526600-9526797)
chr1 (1-200)||(21353196-21353396)
chr1 (101-200)||(9521957-9522057)
chr1 (1-199)||(2232724-2232926)
chr1 (9-200)||(3090959-3091145)
chr1 (1-62)||(9521849-9521911)
chr1 (1-88)||(14997176-14997264)
chr1 (147-200)||(25860251-25860306)
chr1 (1-63)||(9314629-9314691)
chr1 (1-52)||(14183589-14183640)
chr1 (1-52)||(15916623-15916674)
chr1 (1-52)||(27916729-27916780)
chr1 (1-55)||(15823778-15823831)
chr1 (3-64)||(26613224-26613286)
chr1 (1-79)||(27336911-27336989)
chr1 (1-73)||(13215318-13215388)
chr1 (1-62)||(23786071-23786133)
chr1 (1-52)||(6115101-6115151)
chr1 (122-176)||(9314522-9314574)
chr1 (1-52)||(9459416-9459466)
chr1 (1-52)||(9463243-9463293)
chr1 (158-199)||(2510184-2510226)
chr1 (1-55)||(2510321-2510374)
chr1 (1-55)||(6823246-6823299)
chr1 (1-55)||(10399824-10399877)
chr1 (1-55)||(13358805-13358858)
chr1 (1-55)||(15294830-15294883)
chr1 (1-51)||(16226399-16226448)
chr1 (1-55)||(17186123-17186176)
chr1 (1-55)||(17324632-17324685)
chr1 (1-55)||(28207064-28207117)
chr1 (9-59)||(28279508-28279558)
chr1 (1-55)||(28840911-28840964)
chr1 (1-55)||(31735517-31735570)
chr1 (1-55)||(39462751-39462804)
chr1 (1-55)||(50307542-50307595)
chr1 (1-55)||(51750271-51750324)
chr1 (1-55)||(51752595-51752648)
chr1 (4-64)||(8349036-8349097)
chr1 (1-64)||(13127672-13127736)
chr1 (1-49)||(13598402-13598449)
chr1 (1-64)||(16561700-16561764)
chr1 (1-49)||(19072932-19072979)
chr1 (1-49)||(19120822-19120869)
chr1 (1-49)||(26644943-26644990)
chr1 (1-49)||(37069774-37069821)
chr1 (1-49)||(47703982-47704029)
[»] scaffold1050 (1 HSPs)
scaffold1050 (1-200)||(2918-3118)
[»] scaffold0256 (1 HSPs)
scaffold0256 (1-200)||(16459-16657)
[»] scaffold0006 (2 HSPs)
scaffold0006 (101-199)||(231347-231445)
scaffold0006 (1-49)||(5687-5734)
[»] scaffold0131 (2 HSPs)
scaffold0131 (101-199)||(17725-17824)
scaffold0131 (1-73)||(14359-14429)
[»] scaffold0209 (2 HSPs)
scaffold0209 (1-67)||(16968-17034)
scaffold0209 (120-200)||(16884-16965)
[»] scaffold0005 (2 HSPs)
scaffold0005 (3-80)||(50257-50333)
scaffold0005 (3-80)||(52256-52332)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-64)||(1625-1689)
[»] scaffold0140 (3 HSPs)
scaffold0140 (1-53)||(22356-22407)
scaffold0140 (1-53)||(24631-24682)
scaffold0140 (1-49)||(8465-8512)
[»] scaffold0267 (1 HSPs)
scaffold0267 (1-52)||(282-332)
[»] scaffold0370 (1 HSPs)
scaffold0370 (1-55)||(1447-1500)
[»] scaffold0025 (1 HSPs)
scaffold0025 (1-55)||(69286-69339)
[»] scaffold0068 (1 HSPs)
scaffold0068 (1-53)||(29411-29462)
[»] scaffold0057 (1 HSPs)
scaffold0057 (4-52)||(16646-16694)


Alignment Details
Target: chr2 (Bit Score: 478; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 1 - 550
Target Start/End: Original strand, 38191146 - 38191696
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||              
T  38191146 tgctctctcccctagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctccttcttccttttatctcttgctgtttgtttttttttt 38191245  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  38191246 tgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaagttttattggtgtgattttcacaacgaattcacaaca 38191345  T
Q  200 acattcaattaatttattttcttaaattatcactagagtcgttgtgttagtgtcggtgtcgtgtttagtgtctatgtttgtataattacttcatattttg 299  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  38191346 acattcaattaatttattttcttaaattatcactggagtcgttgtgttagtgtcggtgtcgtgtttagtgtctgtgtttgtataattacttcatattttg 38191445  T
Q  300 caatgaagaaatataatccatccttgctaatgatgaggtccctaatatttctttacttataattgatagaatcattattatttataggcagctacattaa 399  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38191446 caatgaagaaatataatccatccttgctaatgatgaggtccctaatatttctttacttataattgatagaatcattattatttataggcagctacattaa 38191545  T
Q  400 ataacaacctattatattgaagcttggaaaacaagttactatcacaaagtgaattgtggttcaaagcaatcaaacaagggatcaagatgaattacctgtt 499  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38191546 ataacaacctattatattgaagcttggaaaacaagttactaacacaaagtgaattgtggttcaaagcaatcaaacaagggatcaagaggaattacctgtt 38191645  T
Q  500 cccttcttttcaattcagcctctctagcttgaagttctttctcctttgctt 550  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38191646 cccttcttttcaattcagcctctctagcttgaagttctttctcctttgctt 38191696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 27517687 - 27517491
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    |||||||| ||||||||||| |||||            
T  27517687 tgctctctcccccagactaggtcatcattagaccgaacttggtaaacaaattcttgtgttcttcttcttcttccctttatctcttgttgttt------at 27517594  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcaca 196  Q
        ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  27517593 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctcaacgaattcaca 27517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 2736338 - 2736537
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||||||||||||||||||||||||        
T  2736338 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctcttccttttatctcttgctgttt---- 2736433  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaatt 192  Q
            ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  2736434 ----ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaagttttattggtgtggttttctcaacgaatt 2736529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20054813 - 20054609
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-------cttcttccttttatctcttgctgtttgnnnn 93  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||         
T  20054813 tgctctctccaccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttcttccttttatctcttgctgtttacttt 20054714  T
Q  94 nnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag---ttttattggtgtggttttcacaacgaa 190  Q
            |||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| |||||||    
T  20054713 tgt-----tttggattatttgctatccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttttattggtgtggttttctcaacgaa 20054619  T
Q  191 ttcacaacaa 200  Q
    ||||||||||    
T  20054618 ttcacaacaa 20054609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 37170800 - 37170606
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||| ||||||||||||||||| || ||| | |||||||||||| |||||||||| |||||||||||||||||||||||||               
T  37170800 tgctctctcccc-agactaggtcatcattaaacagaattaggtaaacaaattattgtgttctccttcttccttttatctcttgctgttt------acttt 37170708  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaac 198  Q
     |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  37170707 tgtttgaattatttactacccacttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgattttcacaacgaattcacaac 37170608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 13 - 199
Target Start/End: Complemental strand, 22712565 - 22712374
Alignment:
Q  13 cagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----------tcttccttttatctcttgctgtttgnnnnnnnnnnng 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||||||||||||            |    
T  22712565 cagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctctctctcttccttttatctcttgctgttt------atttttg 22712472  T
Q  102 tttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  22712471 tttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctcaacgaattcacaaca 22712374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 17943669 - 17943867
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |     |||||| | |||||||||||||||           
T  17943669 tgctctctcccccagactaggtcatcattagaccgaactaggtaaacaaattcttgtgttctttctctttcttccctctatctcttgctgttt------- 17943761  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattc 193  Q
         ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||    
T  17943762 tatttgtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaagtttgttattggtgtgtttttctcaacgaattc 17943861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 20050070 - 20049866
Alignment:
Q  1 tgctctctccccc-agactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-------cttcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||        
T  20050070 tgctctctccccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttcttccttttatctcttgctgtttactt 20049971  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag---ttttattggtgtggttttcacaacga 189  Q
             |||| |||||||| || ||| |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||    
T  20049970 ttgt-----tttggattatttgctatccgattgatttgattacttggtattaatttgctccacgcatcaagtttttttattggtgtggttttctcaacga 20049876  T
Q  190 attcacaaca 199  Q
    ||||||||||    
T  20049875 attcacaaca 20049866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 33671015 - 33670817
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |       ||||||||||| ||||||||||||        
T  33671015 tgctctctcccccagactaggtcatcattagaccgaactgcgtaaacaaatatcttgtgttctttctctctctcttccttttacctcttgctgttt---- 33670920  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaat 191  Q
            ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||    
T  33670919 -----tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgatccacgcatcaagtttttattggtgtggttttctcaacgaat 33670825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 2741074 - 2741260
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |       ||||||||||||||||||||||||        
T  2741074 tgctctctcccccagactaggtcatcattagaccgaactaggtaaacaaatatcttgtgttctttctctctctcttccttttatctcttgctgttt---- 2741169  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaac 187  Q
            ||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  2741170 ----ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctctacgcatcaagttttattggtgtggttttctcaac 2741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 13 - 200
Target Start/End: Complemental strand, 22717274 - 22717082
Alignment:
Q  13 cagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----------tcttccttttatctcttgctgtttgnnnnnnnnnnng 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||||||||||||            |    
T  22717274 cagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctctctctcttccttttatctcttgctgttt------atttttg 22717181  T
Q  102 tttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  22717180 tttggattaattgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagttttattggtgtggttttctcaacgaattcacaacaa 22717082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 30479128 - 30479322
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttc----tcttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    |||||||||||||||||||||||||||            
T  30479128 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtattcttcttcttcttccttttatctcttgctgttt------at 30479221  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcaca 196  Q
        ||||| |||||||| ||||| ||||||||||||| || || ||||||| ||||||||||||||| |||||| |||||||||| |||| ||||||||    
T  30479222 ttttgtttggattatttgctacccacttgatttgattattttgtgttaatttactccacgcatcaagtattattgatgtggttttctcaacaaattcaca 30479321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 45679856 - 45680055
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       |||  |||||||||||||||||||        
T  45679856 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctcttttatctcttgctgttt---- 45679951  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaa 190  Q
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  45679952 ------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaa 45680045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 12781269 - 12781075
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttg-ctgtttgnnnnn 94  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |     |||||||||||||||||| ||  ||          
T  12781269 tgctctctcccccagactaggtcatcattagaccgaactaggtaaacaaattattgtgttctttctctctcttccttttatctcttgtctactt------ 12781176  T
Q  95 nnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattc 193  Q
          ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  12781175 ---tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtatggttttctcaacgaattc 12781079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 39680178 - 39680378
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||       |||  | |||| ||||||||||||        
T  39680178 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctctctctctctctctcctttaactcttgctgttt---- 39680273  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaa 190  Q
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  39680274 -----tttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaa 39680368  T
Q  191 ttcacaacaa 200  Q
    ||||||||||    
T  39680369 ttcacaacaa 39680378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 17462569 - 17462768
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---------tcttccttttatctcttgctgtttgn 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |         |||  ||||||| |||||||||||      
T  17462569 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctctcttttatttcttgctgttt-- 17462666  T
Q  91 nnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacga 189  Q
              || || |||| ||| ||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||    
T  17462667 ---------tgtgtggattaattgctacccgcttgatttgattactcggtattaatttgctccacacatcaagtttttattggtgtggttttctcaacga 17462757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 39687221 - 39687321
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaattcacaac 198  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  39687221 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaattcacaac 39687320  T
Q  199 a 199  Q
    |    
T  39687321 a 39687321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39687116 - 39687178
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttct 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  39687116 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 39687178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 28458874 - 28458789
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgttt 88  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||| |||||||||||| |||| ||| |||||| ||||||||||    
T  28458874 ctctctcccctagagtaggtcatcattagaccaaactgggtaaacaatttcttgtgttctccttcgtcc-tttatcccttgctgttt 28458789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 34575184 - 34575121
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct 64  Q
    |||||||||||||||||||||||| |||| || |||||| |||||||||||| |||||||||||    
T  34575184 tgctctctcccccagactaggtcagcattggatcgaactaggtaaacaaatttttgtgttctct 34575121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40699583 - 40699647
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||| |||||||||||||||||  ||||||||||||| |||||||||| ||| ||||||||||    
T  40699583 tgctctttcccccagactaggtcagtattagaccgaactaggtaaacaaatttcgtgtgttctct 40699647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 31732823 - 31732761
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct 64  Q
    ||||||||||||||||||||||||   || |||||| |||||||||||||||| ||||||||||    
T  31732823 tgctctctcccccagactaggtcaat-ttggaccgagctgggtaaacaaattcgtgtgttctct 31732761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42064722 - 42064789
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttctt 68  Q
    ||||||||||||||||||||||||   || ||||||||||||| ||||||||||| |||  |||||||    
T  42064722 tgctctctcccccagactaggtcaaatttggaccgaactgggtcaacaaattcttttgtgttcttctt 42064789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 5375393 - 5375307
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttccttttatctcttgctgttt 88  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  |||||||||| |||| ||||| |||||||||||||    
T  5375393 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttctc-tctt-cttttctctcttgctgttt 5375307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 8173539 - 8173589
Alignment:
Q  2 gctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||| |||||||||  ||| ||||||||||||||||||||||    
T  8173539 gctctctcccccatactaggtcagtattggaccgaactgggtaaacaaatt 8173589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 200
Target Start/End: Complemental strand, 28458751 - 28458692
Alignment:
Q  145 atttgctccacgcatcaagtttt----attggtgtggttttcacaacgaattcacaacaa 200  Q
    |||||||| ||||||||||||||    ||||||||||||||||||| |||||||||||||    
T  28458751 atttgctctacgcatcaagttttttttattggtgtggttttcacaatgaattcacaacaa 28458692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 3022380 - 3022453
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttcctttt 74  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  |||||||||| ||||||||||    
T  3022380 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttctc-tcttcctttt 3022453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36558911 - 36558860
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  36558911 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 36558860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36561188 - 36561137
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  36561188 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 36561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 42923346 - 42923292
Alignment:
Q  147 ttgctccacgcatcaagttt--tattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||    
T  42923346 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaacaa 42923292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 42923404 - 42923350
Alignment:
Q  147 ttgctccacgcatcaagttt--tattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| ||||||||||  |||||||||| |||||||||||||||||||||||    
T  42923404 ttgctccacacatcaagtttgttattggtgtg-ttttcacaacgaattcacaacaa 42923350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 1345587 - 1345641
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttg 56  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| ||||| ||||||    
T  1345587 tgctctctcccccagagtaggtcat-attggaccgaactgggtcaacaatttcttg 1345641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2838076 - 2838130
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttg 56  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| ||||| ||||||    
T  2838076 tgctctctcccccagagtaggtcat-attggaccgaactgggtcaacaatttcttg 2838130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6264195 - 6264123
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttccttt 73  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  |||||||||| |||||||||    
T  6264195 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttctc-tcttccttt 6264123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28196845 - 28196896
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||    
T  28196845 tgctctctcccccagactaggtca--att-gaccgaactgggtcaacaaattctt 28196896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11739606 - 11739553
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  11739606 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 11739553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13910092 - 13910039
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  13910092 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 13910039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 19502058 - 19502005
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  19502058 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 19502005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 20592288 - 20592350
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||||||||||||||||  ||| ||||||| ||| |||||||| ||| ||||||||||    
T  20592288 ctctctcccccagactaggtcagtattggaccgaattggataaacaaatttcgtgtgttctct 20592350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23452284 - 23452231
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  23452284 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 23452231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27105005 - 27105058
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  27105005 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 27105058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35215633 - 35215584
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  35215633 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaat 35215584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 35218010 - 35217961
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  35218010 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaat 35217961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 45332228 - 45332179
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  45332228 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaat 45332179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13569379 - 13569332
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  13569379 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 13569332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14699053 - 14699100
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  14699053 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 14699100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17897292 - 17897229
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||||| |||||||||||  ||| | |||||||||||||||||| ||| ||||||||||    
T  17897292 tgctctctcccc-agactaggtcagtattggtccgaactgggtaaacaaatttcgtgtgttctct 17897229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20522271 - 20522224
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  20522271 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 20522224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 4e-70; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 23179609 - 23179410
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-------cttcttccttttatctcttgctgtttgnnnn 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||         
T  23179609 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttcttccttttatctcttgctgttt----- 23179515  T
Q  94 nnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattc 193  Q
           |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23179514 -acttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattc 23179416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 17799472 - 17799277
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||               
T  17799472 tgctctctctcccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctccttcttccttttatctcttgttgttt------acttt 17799379  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaac 198  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||| || |||  |||||| |||||||||||||||||||||||||||||||||||    
T  17799378 tgtttgaattatttgctacccgcttgatttgattacttggtattaatttacttcacatatcaagtttttattggtgtggttttcacaacgaattcacaac 17799279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 28890899 - 28891096
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       |||||||||||||| |||||||||        
T  28890899 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctcttccttttatctgttgctgttt---- 28890994  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaatt 192  Q
            ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  28890995 ------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagttttattggtgtggttttctcaacgaatt 28891088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 28895636 - 28895833
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||||||||||||||||||||||||        
T  28895636 tgctctctcctctagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttatctctctcttccttttatctcttgctgttt---- 28895731  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaatt 192  Q
            ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  28895732 ------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctcaacgaatt 28895825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 9021155 - 9020956
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |     ||||||||||||||||||||||||           
T  9021155 tgctctctccaccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgctgttt------a 9021062  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagt-tttattggtgtggttttcacaacgaattca 194  Q
         ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | || ||||||    
T  9021061 cttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcattaagtctttattggtgtggttttctcgacaaattca 9020962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 199
Target Start/End: Original strand, 3276455 - 3276626
Alignment:
Q  24 atcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnnngtttgaattatttgttacccgc 122  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||            ||||| |||||||| |||||||    
T  3276455 atcattagaccgaactgggtaaacaaattcttgtgttcttcttcttccttttatctcttgctgttt------acttttgtttggattatttgctacccgc 3276548  T
Q  123 ttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  3276549 ttgatttgattacttgttattaatttgctccacgcatcaagtttttattggtgtggttttaacaaggaattcacaaca 3276626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 21034003 - 21034181
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||               
T  21034003 tgctcttttccccatactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctttcttccttttatctcttgctgttt-----actttt 21034097  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggtttt 181  Q
      |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  21034098 attttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttt 21034181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 26268280 - 26268084
Alignment:
Q  1 tgctctctccccc-agactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    ||||||||| ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||              
T  26268280 tgctctctctccctagactaggtaatcattagaccgaactgagtaaacaaattcttgtgttctacttcttccttttatctcttgctgttt------actt 26268187  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcaca 196  Q
      |||||||||||||  |||| ||||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||    
T  26268186 ttgtttgaattattttctaccagcttgatttaattacatggtattaatttgctccacgcatcaagtttattattggtgtggttttcagaacgaattcaca 26268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 25684776 - 25684972
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnn 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |     |||   |||||| |||||||||||          
T  25684776 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctcttttttatttcttgctgttt------ 25684869  T
Q  95 nnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattc 193  Q
          ||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  25684870 ---tttgtttggattatttgctacccacttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattc 25684966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 590931 - 591126
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttct------tccttttatctcttgctgtttgnnnnnnnn 97  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||      |||||||||||||||||||||             
T  590931 tctctcccccagactaggacatcattagaccgaactgggtaaataaattcttgtgttcttttctctctcttccttttatctcttgctgttttatttta-- 591028  T
Q  98 nnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatc-aagttttattggtgtggttttcacaacgaattcaca 196  Q
         ||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||||| |||||||||||||    
T  591029 -----ttggattatttgctacccgcttgatttgattacttggtattaattttttccacgcatcaaatttttattggtgtggttttctcaacgaattcaca 591123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 28328041 - 28328240
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       |||  | |||| ||||||||||||        
T  28328041 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctcctttaactcttgctgttt---- 28328136  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaa 190  Q
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  28328137 ------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaa 28328230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 30423349 - 30423541
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||               
T  30423349 tgctctctcctccagagtaggtcatcattagaccgaacagggtaaacaaattcttgtgttctccttcttcc-tttatctcttgctgttt------atttt 30423441  T
Q  100 ngtttgaattat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaac 198  Q
     ||||||||||| |||| ||||||||||||||||| |||||| || ||||||||||| |||||||||||||||||||| ||||  ||| |||||||||||    
T  30423442 tgtttgaattatattgtcacccgcttgatttgattgcttggt-tttatttgctccacacatcaagttttattggtgtgatttttgcaatgaattcacaac 30423540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 28332764 - 28332962
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |       |||  | |||| ||||||||||||        
T  28332764 tgctctctcctccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctcctttaactcttgctgttt---- 28332859  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaa 190  Q
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  28332860 ------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaa 28332953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4812536 - 4812336
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---------tcttcct----tttatctcttgctgt 86  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||         ||| |||    |||||||||||||||    
T  4812536 tgctctctccccaagactaggtcataattagaccgaactgggtaaacaaatatcttgtgttctctctctccctctctccctctcttttatctcttgctgt 4812437  T
Q  87 ttgnnnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcaca 185  Q
    ||            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  4812436 tt----------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 4812347  T
Q  186 acgaattcaca 196  Q
    |||||||||||    
T  4812346 acgaattcaca 4812336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 10 - 199
Target Start/End: Complemental strand, 16752563 - 16752374
Alignment:
Q  10 ccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnnnnnnnnnng 101  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       |||  | |||||||||||||||||            |    
T  16752563 ccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctcctttatctcttgctgttt----------ttg 16752474  T
Q  102 tttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaattcacaaca 199  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||    
T  16752473 tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaattcacaaca 16752374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16757316 - 16757109
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---------------tcttccttttatctcttgct 84  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |               ||| || |||||||||||||    
T  16757316 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctctctctcccctttatctcttgct 16757217  T
Q  85 gtttgnnnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttc 182  Q
    ||||            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  16757216 gttt----------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttc 16757127  T
Q  183 acaacgaattcacaacaa 200  Q
     |||||||||||||||||    
T  16757126 tcaacgaattcacaacaa 16757109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 33032788 - 33032971
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||| || ||||||||||||||||| ||||||||||||||| ||| | ||||||||| ||||||||||||||||||||| ||||               
T  33032788 tgctctctctcctagactaggtcatcattaaaccgaactgggtaaaaaaaattttgtgttctccttcttccttttatctcttgccgttt------acttt 33032881  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaac 187  Q
     |||| ||||||||| ||| ||||||||||||||||||| ||||||||||||| | ||||||||  |||||||||||| |||||||||||    
T  33032882 tgttttaattatttgctactcgcttgatttgattacttgatattaatttgctctatgcatcaagttttttattggtgtcgttttcacaac 33032971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 29554803 - 29554705
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| |||| |||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  29554803 gtttggattatttgctaccagcttgatttgattacttgatattaatttactccacgcatcaagtattattggtgtggttttctcaacgaattcacaaca 29554705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 4823622 - 4823550
Alignment:
Q  128 ttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  4823622 ttgattacttggtattaattttctccacacatcaagttttattggtgtggttttctcaacgaattcacaacaa 4823550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 3005678 - 3005616
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc 63  Q
    ||||||||||||||||| ||||||   || |||||||||||||||||||||||||||||||||    
T  3005678 tgctctctcccccagaccaggtcagttttggaccgaactgggtaaacaaattcttgtgttctc 3005616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 31162502 - 31162579
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctcttcttccttttatctc 79  Q
    ||||| ||||||||||||||||  ||| |||||||||||||||||||| ||| ||||||||||| || ||||| ||||    
T  31162502 ctctcccccccagactaggtcagtattggaccgaactgggtaaacaaatttcgtgtgttctcttttttcttttctctc 31162579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 28228790 - 28228842
Alignment:
Q  145 atttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaa 197  Q
    |||| |||||| |||||||||||||||||||| |||| |||||||||||||||    
T  28228790 attttctccacacatcaagttttattggtgtgatttttacaacgaattcacaa 28228842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 2267026 - 2266933
Alignment:
Q  108 ttatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-tattggtgtggttttcacaacgaattcacaacaaca 202  Q
    |||||||| ||| |||||||||||||  ||||| ||| ||||||| || |||||||||| |||||||||| ||||  |||||||||||||||||||    
T  2267026 ttatttgtcacctgcttgatttgattgtttggtttta-tttgctc-acacatcaagtttatattggtgtgatttttgcaacgaattcacaacaaca 2266933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 13858531 - 13858469
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc-ttgtgttctc 63  Q
    ||||||||||||||||||||||||   || ||| ||||||||||||||||||| ||||||||||    
T  13858531 tgctctctcccccagactaggtca-atttggacagaactgggtaaacaaattctttgtgttctc 13858469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15072999 - 15073049
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||   |||||||||||||||| ||||||||    
T  15072999 tgctctctcccccagactaggtca-atttagaccgaactgggtcaacaaatt 15073049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31035406 - 31035472
Alignment:
Q  1 tgctctctcccccagacta--ggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||||||||||||  |||||  ||| |||||||||||||||||||| ||| ||||||||||    
T  31035406 tgctctctcccccagactataggtcagtattggaccgaactgggtaaacaaatttcgtgtgttctct 31035472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 31566601 - 31566554
Alignment:
Q  5 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||| |||||||||  ||| ||||||||||||||||||||||    
T  31566601 ctctcccccatactaggtcagtattggaccgaactgggtaaacaaatt 31566554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31578324 - 31578273
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||||| |||||||||||  ||  ||||||||||||||||||||||    
T  31578324 tgctctctcccctagactaggtcagtataggaccgaactgggtaaacaaatt 31578273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43079890 - 43079940
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  43079890 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 43079940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 43082261 - 43082311
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  43082261 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 43082311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3874298 - 3874351
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  3874298 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 3874351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4424306 - 4424359
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  4424306 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 4424359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14419237 - 14419184
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  14419237 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 14419184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27829584 - 27829637
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  27829584 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 27829637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 29554833 - 29554803
Alignment:
Q  1 tgctctctcccccagactaggtcatcattag 31  Q
    |||||||||||||||||||||||||||||||    
T  29554833 tgctctctcccccagactaggtcatcattag 29554803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30480550 - 30480497
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  30480550 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 30480497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32339597 - 32339650
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  32339597 tgctctctcccccagactaggtca-atttggaccgaactgggttaacaaattctt 32339650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 229
Target Start/End: Complemental strand, 29096985 - 29096956
Alignment:
Q  200 acattcaattaatttattttcttaaattat 229  Q
    ||||||||||||||||||||||||||||||    
T  29096985 acattcaattaatttattttcttaaattat 29096956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 41382950 - 41383028
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttccttttatctc 79  Q
    ||||||||||||||||||||||||   || ||||||||| ||| |||||||||  |||||||||| |||||||||| ||||    
T  41382950 tgctctctcccccagactaggtca-atttggaccgaactaggtcaacaaattcttttgtgttctc-tcttccttttctctc 41383028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6376277 - 6376341
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttctct 64  Q
    ||||||||||| ||||||||||||  ||| |||||||||  ||||||||||| | ||||||||||    
T  6376277 tgctctctccctcagactaggtcagtattggaccgaacttagtaaacaaattttgtgtgttctct 6376341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9765865 - 9765912
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  9765865 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 9765912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 14808051 - 14808102
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  14808051 ctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 14808102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 21482599 - 21482662
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||||||| |||||||||   || |||||||||||||||||||| ||| ||||||||||    
T  21482599 tgctctctcccccaaactaggtcaat-ttggaccgaactgggtaaacaaatttcgtgtgttctct 21482662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26403276 - 26403323
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  26403276 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 26403323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 36865976 - 36866023
Alignment:
Q  147 ttgctccacgcatcaagttt--tattggtgtggttttcacaacgaatt 192  Q
    ||||||||| ||||||||||  ||||| ||||||||||||||||||||    
T  36865976 ttgctccacacatcaagtttgttattgatgtggttttcacaacgaatt 36866023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 133; Significance: 7e-69; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 42238394 - 42238589
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||               
T  42238394 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctccttcttccttttatctcttgctgttt------atttt 42238487  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaac 198  Q
     ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||    
T  42238488 tgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttacaacgaattcacaac 42238587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 22672968 - 22673163
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct---tcttccttttatctcttgctgtttgnnnnnnnn 97  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||             
T  22672968 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctcttccttttatctcttgctgttt------att 22673061  T
Q  98 nnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaa 197  Q
       |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  22673062 tttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcttaacgaattcacaa 22673161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 28786538 - 28786728
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctcttgctgtttgnnnnnnnnnnn 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||               
T  28786538 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc--cttccttttatctcttgctgtttg-----cttttt 28786630  T
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaa 197  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  28786631 gtttgaattatttgctacccgcttgatttgattatttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaa 28786728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 17841297 - 17841110
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||               
T  17841297 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattattgtgttctccttcttccttttatctcttgctattt------atttt 17841204  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattc 193  Q
     |||||||||||||| ||||||||| ||||||||||| | ||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  17841203 tgtttgaattatttgctacccgcttaatttgattactcgatattaatttgccccacgcatcaagttttattggtgtagttttcacaacgaattc 17841110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 11962481 - 11962287
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||               
T  11962481 tgctctcttcctcatactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctccttcttccttttatctcttgttgttt------acttt 11962388  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcacaa 197  Q
     |||||||||||||| |||||||||||||||||||||| ||||||||||||| || ||||||||  ||||||||||||||||||||||||||||||||||    
T  11962387 tgtttgaattatttgctacccgcttgatttgattacttagtattaatttgctaca-gcatcaagttttttattggtgtggttttcacaacgaattcacaa 11962289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 11 - 199
Target Start/End: Complemental strand, 16093330 - 16093144
Alignment:
Q  11 cccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnnngtttgaatt 109  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||            |||||||||    
T  16093330 cccatactaggtcatcattagaccgaactggataaacaaattcttgtgttctccttcttccttttatctcttgttgttt------acttttgtttgaatt 16093237  T
Q  110 atttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtgg-ttttcacaacgaattcacaaca 199  Q
    ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  16093236 atttgttattcgcttgatttgattacttggtattaatttactccacgcatcaagtttattattggtgtggtttttcacaacgaattcacaaca 16093144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 207
Target Start/End: Complemental strand, 35385500 - 35385295
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       |||||||||||||||||| || ||        
T  35385500 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctcttccttttatctcttgttgatt---- 35385405  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaat 191  Q
            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||| ||||    
T  35385404 ------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtagttttctcaatgaat 35385311  T
Q  192 tcacaacaacattcaa 207  Q
    ||||||||| ||||||    
T  35385310 tcacaacaagattcaa 35385295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 25445630 - 25445803
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     |||||||||||||||||| |||||           
T  25445630 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgatgttt------- 25445722  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtgg 177  Q
         ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  25445723 ---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25445803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 25452629 - 25452802
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |     ||||||||||||||||||||||||           
T  25452629 tgctctctcccccagaataggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgctgttt------- 25452721  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtgg 177  Q
         ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  25452722 ---ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtattttattggtgtgg 25452802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1240562 - 1240760
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    ||||||||| |||| ||||||||||||||| |||||||| |||||| |||||||||||||||    |||||||||||||||||||||| |||            
T  1240562 tgctctctctcccaaactaggtcatcattaaaccgaactaggtaaataaattcttgtgttcttcttcttcttccttttatctcttgctatttacttttgt 1240661  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 195  Q
         |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||    
T  1240662 -----tttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttcctcaacgaattcac 1240756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 3 - 200
Target Start/End: Original strand, 40222901 - 40223098
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctt-cttccttttatctcttgctgtttgnnnnnnnnnnng 101  Q
    ||||| |||||| |||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||             |    
T  40222901 ctctcccccccatactaggtcatcattagaccgaactaggtaaacaaattattgtgttctctttcttccttttatctcttgttgtt---cattccttttg 40222997  T
Q  102 tttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatc-aagttttattggtgtgg-ttttcacaacgaattcacaaca 199  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| |||| |||||||||||||||||    
T  40222998 tttggattatttgctaccctcttgatttgattacttggtattaatttactccacgcatcaaatttttattggtgtggttttttacaacgaattcacaaca 40223097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10627500 - 10627696
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||| |||||||||||||| |||||||||| |||||||| |||||               
T  10627500 tgctctctcccctagagtaggtcatcattagactgaactgggtaaacagattcttgtgttctccttcttccttt-atctcttgttgttt------atttt 10627592  T
Q  100 ngtttgaattat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcaca 196  Q
     ||||||||||  |||| ||||||||||||||||| |||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||    
T  10627593 tgtttgaattaaattgtcacccgcttgatttgattgcttggttttaatttgctccacgcatcaagtttattattggtgtggttttcacaatgaattcaca 10627692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 2298049 - 2297849
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-----------tcttcctttt-atctcttgctgtt 87  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |           |||||||||| |||||||||||||    
T  2298049 tgctctcccccccagactaggtcatcattagaccgaactaggtaaacaaatatcttgtgttctttctctctctctctcttcctttttatctcttgctgtt 2297950  T
Q  88 tgnnnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaac 187  Q
    |            ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||||    
T  2297949 t-----------tgtttggattatttgctacccgcttgatttgattacttggtattaatttactccacgcatcaagttttgttggtgtggttttctcaac 2297861  T
Q  188 gaattcacaaca 199  Q
    ||||||||||||    
T  2297860 gaattcacaaca 2297849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 1170944 - 1171142
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tct-tccttttatctcttgctgtttgnn 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||| |||||||||||||||||| ||       
T  1170944 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctccttttatctcttgctggtt--- 1171040  T
Q  92 nnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaa 190  Q
             ||||| |||| ||| |||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||||||    
T  1171041 -------ttgtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaa 1171133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 20437149 - 20437249
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaac 198  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||| || |||||||||  || |||||||| |||||||||||||||||||||    
T  20437149 gtttgaattatttgctacccgcttgatttgattacttgatattaatttgctcaacacatcaagtttattgttggtgtgattttcacaacgaattcacaac 20437248  T
Q  199 a 199  Q
    |    
T  20437249 a 20437249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 31782503 - 31782310
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||| ||| |||||||||||||||||| |||||||| ||||||||||||| ||||| |||||||||| |||||||||               
T  31782503 tgctctctcccccagagtagatcatcattagaccgaact-ggtaaacagattcttgtgttctccttctgccttttatctgttgctgttt-----tatttt 31782410  T
Q  100 ngtttgaattat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaac 198  Q
     ||||||||||| |||| ||||||||||||||||| |||||  || || |||||||| ||||||||||||||||| || ||||  |||| ||||||||||    
T  31782409 tgtttgaattatattgtcacccgcttgatttgatttcttgg--tttatatgctccacacatcaagttttattggtatgatttttgcaacaaattcacaac 31782312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 26406514 - 26406340
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc-ttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    |||||||||| ||||| ||||| | |||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||||              
T  26406514 tgctctctcctccagagtaggttaacattagaccgaactaggtaaacaaattctttgtgttctccttcttcc-tttatctcttgctgttt------attt 26406422  T
Q  99 nngtttgaattat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggtttt 181  Q
      | ||||||||| |||| |||| |||||||||||| |||||  || ||||||||||| |||||| ||||||||||||| ||||    
T  26406421 ttgcttgaattatattgtcacccacttgatttgattgcttgg--tttatttgctccacacatcaaattttattggtgtgatttt 26406340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10757408 - 10757461
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||    
T  10757408 tgctctctcccccagactaggtcag-attagaccgaactgggtcaacaaattctt 10757461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 21288993 - 21289051
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgtt 60  Q
    ||||||||||||||||||||||||   |||||||||||||||| ||||||||||| ||||    
T  21288993 tgctctctcccccagactaggtcaat-ttagaccgaactgggtcaacaaattcttttgtt 21289051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4410254 - 4410307
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||    
T  4410254 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattctt 4410307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10749932 - 10749985
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||    
T  10749932 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattctt 10749985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 18466916 - 18466981
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttct 67  Q
    ||||||||||||||||||||||||   || ||||||||||||| ||||||||||| |||| ||||||    
T  18466916 tgctctctcccccagactaggtcaat-ttggaccgaactgggtcaacaaattcttttgttttcttct 18466981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 31179418 - 31179358
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct 62  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||  ||||||||    
T  31179418 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatttctgtgttct 31179358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 2724125 - 2724198
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttcctttt 74  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  |||||||||| ||||||||||    
T  2724125 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttctc-tcttcctttt 2724198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15354622 - 15354571
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  15354622 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 15354571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 37705680 - 37705625
Alignment:
Q  147 ttgctccacgcatcaagttt--tattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| ||||||||||  |||||||||||||||| || ||||||||||||||    
T  37705680 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaa 37705625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 3373184 - 3373134
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  3373184 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 3373134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15552477 - 15552527
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  15552477 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 15552527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31542966 - 31543016
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  31542966 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 31543016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 31545312 - 31545362
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  31545312 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 31545362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2175150 - 2175203
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  2175150 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 2175203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10529146 - 10529093
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  10529146 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 10529093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20043222 - 20043275
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||| ||||||||||||   || |||||||||||||||||||||||||    
T  20043222 tgctctctcccacagactaggtcaat-ttggaccgaactgggtaaacaaattctt 20043275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24127088 - 24127141
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  24127088 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 24127141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25921520 - 25921467
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  25921520 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 25921467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 27912768 - 27912821
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  27912768 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 27912821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34479465 - 34479412
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  34479465 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 34479412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6661232 - 6661167
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctctt 65  Q
    ||||||||||| ||||||||||||   || ||||||||||| |||||||| ||| |||||||||||    
T  6661232 tgctctctccctcagactaggtcagatttggaccgaactggataaacaaatttcgtgtgttctctt 6661167  T

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Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 181
Target Start/End: Complemental strand, 34033479 - 34033438
Alignment:
Q  140 tattaatttgctccacgcatcaagttttattggtgtggtttt 181  Q
    |||||||||||||||| ||||| |||||||||||||| ||||    
T  34033479 tattaatttgctccacacatcacgttttattggtgtgatttt 34033438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 34477100 - 34477048
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct 54  Q
    ||||||||||||||||||||||||   || ||||||||||||| ||||||||||    
T  34477100 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattct 34477048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 73
Target Start/End: Complemental strand, 37705824 - 37705757
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttt 73  Q
    |||||||||||||||||||||   || ||||||||| ||| |||||||||||| |||||| |||||||||    
T  37705824 tctctcccccagactaggtcaat-ttggaccgaactaggtcaacaaattcttgcgttctc-tcttccttt 37705757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 40221755 - 40221827
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-tcttccttt 73  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||| || ||| |||| |||||||||    
T  40221755 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattattttgtgctctctcttccttt 40221827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9353378 - 9353425
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  9353378 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 9353425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15143699 - 15143763
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||| ||||||| |||||||||||  ||| ||||||| |||||||||||| ||| ||||||||||    
T  15143699 tgctttctcccctagactaggtcagtatttgaccgaaatgggtaaacaaatttcgtgtgttctct 15143763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15356898 - 15356847
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||| ||||||||||  ||| ||||||||||||| |||||||||    
T  15356898 tgctctctcccccggactaggtca-gattggaccgaactgggtcaacaaattc 15356847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17004006 - 17004053
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  17004006 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 17004053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21684499 - 21684448
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||    
T  21684499 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattc 21684448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23665275 - 23665326
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    |||||||| |||||||||||||||  ||| ||||||||||||| |||||||||    
T  23665275 tgctctcttccccagactaggtca-gattggaccgaactgggtcaacaaattc 23665326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23741906 - 23741855
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    |||||||| |||||||||||||||  ||| ||||||||||||| |||||||||    
T  23741906 tgctctcttccccagactaggtca-gattggaccgaactgggtcaacaaattc 23741855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 23793312 - 23793261
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    |||||||| |||||||||||||||  ||| ||||||||||||| |||||||||    
T  23793312 tgctctcttccccagactaggtca-gattggaccgaactgggtcaacaaattc 23793261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 28322280 - 28322240
Alignment:
Q  200 acattcaattaatttattttcttaaattatcactagagtcg 240  Q
    |||||||||||||| ||||||| ||||||||||||| ||||    
T  28322280 acattcaattaattcattttctcaaattatcactagtgtcg 28322240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36932396 - 36932443
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  36932396 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 36932443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42127456 - 42127503
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| |||||| |||||||||| |||||    
T  42127456 tgctctctcccccagattaggtcat-attagatcgaactgggtcaacaa 42127503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 2e-66; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 11079651 - 11079846
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactg-ggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    ||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||||              
T  11079651 tgctctctcccccagactaggtcatcattagaccgaaattaggtaaacaaattcttgtgttctccttcttccttttatctcttgctgttt------actt 11079744  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaac 198  Q
      |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11079745 ttgtttgaattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaac 11079844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 10897139 - 10897337
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||            
T  10897139 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttccttttatctcttgctgttt------at 10897232  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 195  Q
        ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  10897233 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtggttttctcaacgaattcac 10897332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 10949308 - 10949115
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |              
T  10949308 tgctctctcccccagactaggtcatcattagactgaactggataaacaaattcttgtgttctccttcttccttttatctcttgctgttagttttt----- 10949214  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
     |||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  10949213 -gtttgaattatttgctacgagcttgatttgattacttggtattaatttgctccacgcatcaagttttattgatgtggttttcacagcgaattcacaaca 10949115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 47878219 - 47878033
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||               
T  47878219 tgctctctcctccagactaggtcattattagaccgaactgggtaaacaaattcttgtgttctcattcttccttttatctcttgctgttt------acttt 47878126  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattc 193  Q
     |||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47878125 tgtttgaattatttgctacccacttgatttgattacttg-tattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattc 47878033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 47882930 - 47882737
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctcttgctgtttgnnnnnnnnnnn 100  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||                
T  47882930 tgctctctcccctagactaagtcatcattagatcgaactgggtaaacaaattcttgtgttcccttctttcttttatctcttgctgttt------actttt 47882837  T
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    |||||||||||||  ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47882836 gtttgaattatttactacccacttgatttgattaattggtattaatttgctccacgcatcaagttttattggtgtggttttcacaatgaattcacaacaa 47882737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 20031365 - 20031169
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |              
T  20031365 tgctctctccccaagactaggtcatcattaaaccgaactgggtaaacaaattcttgtgttctccttcttccttttatctcttgctgttcg------tttt 20031272  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcacaa 197  Q
     ||||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||||| |  ||||||||||||||||||||||||||||||||||    
T  20031271 tgtttggattattcgctacccgcttgatttgattacttggtattaatttgctctacgcatcatgttttttattggtgtggttttcacaacgaattcacaa 20031172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 2 - 200
Target Start/End: Complemental strand, 27762033 - 27761839
Alignment:
Q  2 gctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttc-tcttcttccttttatctcttgctgtttgnnnnnnnnnnn 100  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||                
T  27762033 gctctatcccccaaactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttccttttatctcttgctgttt------actttt 27761940  T
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    |||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||| ||||||    
T  27761939 gtttgaattatttgctacccgcttgatttgattagttgatattaatttgctccatgcatcaagtttttattggtgtgtttttcacaacgaatttacaaca 27761840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 48390350 - 48390152
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttcc--ttttatctcttgctgtttgnnnnnnnn 97  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||            
T  48390350 tgctctctcccccagactaggtcatcattaaaccgaactgggtaaacaaattcttgtgttctccttcttccctttttatctcttgctgtttg------tt 48390257  T
Q  98 nnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag---ttttattggtgtggttttcacaacgaattca 194  Q
       ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||   |||||||||||||  |||| |||||||||||    
T  48390256 tttgtttgaattatttgttacccgtttgatttgattacttgatattaatttgctccacgcatcaagtttttttattggtgtgactttctcaacgaattca 48390157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 4535748 - 4535946
Alignment:
Q  1 tgctctctcc-cccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |             
T  4535748 tgctctctcctcccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctttcttccttttatctcttgctgttcg---tttttt 4535844  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgca-tcaagttttattggtgtggttttcacaacgaattcacaa 197  Q
      ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| | || |||||||||| ||||||| |||||||||||||||    
T  4535845 ttgtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcattaaatttttattggtctggtttttacaacgaattcacaa 4535944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 3330027 - 3330221
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||| ||||||| | ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||               
T  3330027 tgctctgtcccccaaa-taggtcatcattagaccgaactgggtacacaaattcttgtgttctccttcttccttttatctcttgctgttt------acttt 3330119  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaa 197  Q
     |||||| ||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||    
T  3330120 tgtttgagttatttgctatccgcttgatttgattacttggtattaatttgctccgcgcatcaagtttgttattggtgtggttttcacaacgaattcacaa 3330219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 5858678 - 5858874
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |     ||||||||||||||||||||||||           
T  5858678 tgctctctcccccagactaggtcatcattagaccgaactgg-taaacaaattcttgtgttctttctccctcttccttttatctcttgctgttttattttg 5858776  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaa-cgaattca 194  Q
           ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  5858777 -------ttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctcaatcgaattca 5858869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 54193360 - 54193557
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||||||||||||||||||||||||        
T  54193360 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctcttccttttatctcttgctgttt---- 54193455  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcac-aacgaat 191  Q
            ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||    
T  54193456 ------ttgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctcaaacgaat 54193549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 10595082 - 10594883
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |     ||||||||||||||||||||||||           
T  10595082 tgctctctcccccatactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgctgtttacttttg 10594983  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattca 194  Q
          |||| |||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||| |||||||||||    
T  10594982 t-----tttggattatttgctacccgcttgatttgattacttggtattaatttactccacgtatcaagtttttattggtgtggttttctcaacgaattca 10594888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 10612826 - 10612626
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||| |||           
T  10612826 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctctctctcttccttttatctcttgctattt-----ac 10612732  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattca 194  Q
          |||| |||||||| ||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  10612731 ttttgttttggattatttgctactcgcttgatttgattatctggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 10612632  T
Q  195 caacaa 200  Q
     |||||    
T  10612631 taacaa 10612626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 4 - 199
Target Start/End: Original strand, 38003006 - 38003195
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnnngt 102  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||            ||    
T  38003006 tctctccctcagactaggtcatcattagaccgaactgcgtaaacaaattcttgtgttctccttcttccttttatctcttgttgttt------acttttgt 38003099  T
Q  103 ttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    || ||||||||| ||||| ||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||| ||||  |||||||||||    
T  38003100 tt-aattatttgctacccactttatttgattacttggtattaatttgctccacgcgtcaaattttattggtgtggtttttacaatcaattcacaaca 38003195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 10201003 - 10200805
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgtt-------ctct-tcttccttttatctcttgctgtttgnn 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||       |||| |||  |||||||||||||||||||       
T  10201003 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtttttctctctctctctctcttttatctcttgctgttt--- 10200907  T
Q  92 nnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaa 190  Q
             ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||    
T  10200906 -------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggttttctcaacgaa 10200814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 29914003 - 29913804
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     |||||  | |||||||||||||||           
T  29914003 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctttcttctctctatctcttgctgttt------t 29913910  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattc 193  Q
         ||||| |||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||||||| |||| |||||    
T  29913909 attttgtttggattatttgctacccgcttgatttgattacttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaac-aattc 29913811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 6303443 - 6303643
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---------tcttccttttatctcttgctgtttgn 90  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||| |         |||  |||||||||||||||||||      
T  6303443 tgctctctcccccagactaggtcatcattaaaccaaactgggtaaacaaatatcttgtgttctttctctctctctctctcttttatctcttgctgttt-- 6303540  T
Q  91 nnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacga 189  Q
              ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  6303541 --------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacga 6303632  T
Q  190 attcacaacaa 200  Q
    |||||||||||    
T  6303633 attcacaacaa 6303643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 10094123 - 10093923
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgtt---------ctct-tcttccttttatctcttgctgtttg 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||         |||| |||  |||||||||||||||||||     
T  10094123 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtttttctctctctctctctctcttttatctcttgctgttt- 10094025  T
Q  90 nnnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacg 188  Q
               ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||    
T  10094024 ---------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtggttttctcaacg 10093934  T
Q  189 aattcacaaca 199  Q
    |||||||||||    
T  10093933 aattcacaaca 10093923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 54188643 - 54188842
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---------tcttccttttatctcttgctgtttgn 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |         |||||||||||||||||| |||||      
T  54188643 tgctctctcccc-agactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctcttccttttatctcttgttgttt-- 54188739  T
Q  91 nnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcac-aacga 189  Q
              ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||    
T  54188740 --------ttgtttggattatttgctacccgcttggtttgattacttggtattaatttgctccacgcatcaaattttattggtgtggttttctcaaacga 54188831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22626032 - 22625828
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------------tcttccttttatctcttgctgt 86  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |             |||||||||||||||||| |||    
T  22626032 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctctcttccttttatctcttgttgt 22625933  T
Q  87 ttgnnnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcaca 185  Q
    ||            ||||| |||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||    
T  22625932 tt----------ttgtttggattatttgctacccgcttcttttgattacttggtattaatttgctccacacatcaagtttttattggtgtggttttctca 22625843  T
Q  186 acgaattcacaacaa 200  Q
    |||||||||||||||    
T  22625842 acgaattcacaacaa 22625828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 10100023 - 10099923
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  10100023 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 10099924  T
Q  200 a 200  Q
    |    
T  10099923 a 10099923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 7418198 - 7418378
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctcttgctgtttgnnnnnnnnnnn 100  Q
    |||||||||||| | | |||||||||||||||||||||||||||||||||| |||||||||||  ||||||||||| |||||||||||                
T  7418198 tgctctctcccc-atagtaggtcatcattagaccgaactgggtaaacaaatccttgtgttctc--cttccttttatatcttgctgttt------attttt 7418288  T
Q  101 gtttgaattattt-gttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaac 187  Q
    ||||||| ||||| || ||||||||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  7418289 gtttgaaatattttgtcacccgcttgatttgattactttgtattaatttgttccacgcatcaagtttattattggtgtggttttcacaac 7418378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 27544521 - 27544619
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  27544521 gtttggattatttgctacccgcttgatttgattacttgatattaatttgctcaacgcatcaagttttattggtgtggttttctcaacgaattcacaaca 27544619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 16462336 - 16462495
Alignment:
Q  13 cagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----------tcttccttttatctcttgctgtttgnnnnnnnnnnng 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |           ||||||||||||||||||||||||            |    
T  16462336 cagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctctctctcttccttttatctcttgctgttt------atttttg 16462429  T
Q  102 tttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttt 167  Q
    |||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16462430 tttggattaattgatacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttt 16462495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 3 - 198
Target Start/End: Original strand, 13893600 - 13893789
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnnng 101  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||||||||||||| |||||||||| ||||| ||||||||            |    
T  13893600 ctctctcccccagagtaggtcattattagac-gaactgggtaaacatattcttgtgttctccttcttccttt-atctcctgctgttt-------attttg 13893690  T
Q  102 tttgaattat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaac 198  Q
    |||||||||| |||| |||||||||||||||||  || || |||||||| || |||||||||| ||||||||||||| |||||||||||||||||||||    
T  13893691 tttgaattatattgtcacccgcttgatttgattgtttagttttaatttgttcaacgcatcaaggttttattggtgtgtttttcacaacgaattcacaac 13893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 29897627 - 29897526
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaac 198  Q
    ||||| |||||||| ||||||||||||||||||| ||||||||||| |||||||| |||||||||  ||||||||||||||||| |||||||||||||||    
T  29897627 gtttggattatttgctacccgcttgatttgattatttggtattaatctgctccacacatcaagtttgttattggtgtggttttctcaacgaattcacaac 29897528  T
Q  199 aa 200  Q
    ||    
T  29897527 aa 29897526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10100140 - 10100080
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgtt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10100140 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 10100080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 10208049 - 10207989
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgtt 60  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10208049 tgctctctcccgcagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 10207989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 27544406 - 27544456
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  27544406 tgctctctccctcagactaggtcatcattagaccgaactgggtaaacaaat 27544456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 1674176 - 1674227
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||||||    
T  1674176 tgctctctccaccagactaggtcagtattagaccgaactgggtaaacaaatt 1674227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 43226297 - 43226373
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctc 79  Q
    |||||||||||| |||||||||||   || ||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  43226297 tgctctctcccctagactaggtcaat-ttggaccgaactgggtcaacaaattcttgtgttctc-tcttccttttctctc 43226373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 36871346 - 36871282
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaac-aaattcttgtgttctct 64  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||| || ||| ||||||||||    
T  36871346 tgctctctcccccagactaggtcagtattggaccgaactgggtaaacgaatttcgtgtgttctct 36871282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 28761473 - 28761414
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgtt 60  Q
    ||||||||||||||||||||||||   || || |||||||||||||||||||||| ||||    
T  28761473 tgctctctcccccagactaggtcaattttggatcgaactgggtaaacaaattcttttgtt 28761414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 53917709 - 53917656
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||    
T  53917709 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattctt 53917656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 746969 - 747019
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  746969 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 747019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 200
Target Start/End: Original strand, 27420998 - 27421056
Alignment:
Q  141 attaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    |||||||||||| || |||||||||||||||||||| ||||  ||| |||||||||||||    
T  27420998 attaatttgctcaacacatcaagttttattggtgtgatttt-tcaatgaattcacaacaa 27421056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1313621 - 1313674
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  1313621 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 1313674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1321691 - 1321744
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  1321691 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 1321744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3859739 - 3859792
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  3859739 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 3859792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5886410 - 5886463
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  5886410 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 5886463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5899883 - 5899936
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  5899883 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 5899936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6484572 - 6484625
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  6484572 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 6484625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7606633 - 7606580
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  7606633 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 7606580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9604652 - 9604599
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   |||||||||||| ||| |||||||||||    
T  9604652 tgctctctcccccagactaggtca-atttagaccgaactaggtcaacaaattctt 9604599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10958368 - 10958315
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  10958368 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 10958315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27635703 - 27635650
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  27635703 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 27635650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 31151556 - 31151621
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct--tgtgttctct 64  Q
    ||||||||||||||||||||||||   || | | ||||||||||||||||||||  ||||||||||    
T  31151556 tgctctctcccccagactaggtcagttttgggctgaactgggtaaacaaattctcatgtgttctct 31151621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35919160 - 35919107
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  35919160 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 35919107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41849271 - 41849324
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  41849271 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 41849324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 42990516 - 42990569
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  42990516 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 42990569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43421460 - 43421407
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  43421460 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 43421407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50494211 - 50494260
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  50494211 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaat 50494260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 5926809 - 5926745
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc-ttgtgttctctt 65  Q
    ||||||||||| ||||||||||||   || ||||||||||||| ||||||||| ||||||||||||    
T  5926809 tgctctctcccgcagactaggtcaat-ttggaccgaactgggtcaacaaattctttgtgttctctt 5926745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1417526 - 1417573
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  1417526 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 1417573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 1736341 - 1736388
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  1736341 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 1736388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8370522 - 8370569
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  8370522 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 8370569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 140 - 200
Target Start/End: Complemental strand, 14634350 - 14634290
Alignment:
Q  140 tattaatttgctccacgcatcaagt--tttattggtgtggttttcacaacgaattcacaacaa 200  Q
    |||||||||| ||||| ||||||||  |||||||||||| ||||||  |||||||||||||||    
T  14634350 tattaatttgttccacacatcaagtattttattggtgtgattttca--acgaattcacaacaa 14634290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18552919 - 18552966
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  18552919 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 18552966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21711274 - 21711227
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  21711274 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 21711227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27974988 - 27975035
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  27974988 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 27975035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27986482 - 27986529
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  27986482 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 27986529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30709826 - 30709873
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  30709826 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 30709873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 53894102 - 53894051
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||    
T  53894102 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattc 53894051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 7e-66; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4570228 - 4570421
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| |||||               
T  4570228 tgctctctcccccagact-ggtcatcattagaccgaactgtgtaaacaaattcttgtgttcttcttcttccttttatctcttgttgttt------actat 4570320  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4570321 tgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcaaaacgaattcacaaca 4570420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 4885008 - 4885204
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctt-cttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |||               
T  4885008 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctttcttccttttatctcttgttattt------acctt 4885101  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaac 198  Q
     ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||    
T  4885102 tgtttggattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgatttttacaacgaattcacaac 4885201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 18587100 - 18587299
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     ||||||||||||||||||||||||           
T  18587100 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgctgttt------a 18587193  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattca 194  Q
         |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  18587194 tttttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 18587293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 4556108 - 4555915
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||               
T  4556108 tgctctctcccccagactaggtcatcattaaaccgaactgggtaaacaaattcttgtgttctctttcttccttttatctcttgctgttt------acttt 4556015  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
     ||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  4556014 tgtttggattaattgctacccgcttgatttgattatttggtattaatttgctccacgcatcaaattttattggtgtggttttctcaacaaattcacaaca 4555915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 16688988 - 16688793
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctt-cttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||               
T  16688988 tgctctctcccacaaactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctttcttccttttatctcttgctgttt------acttt 16688895  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaac 198  Q
     ||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  16688894 tgtttggattatttgctacccgcttgattcgattacttgatattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaac 16688795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 8529401 - 8529602
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     ||||||||||||||||||||||||           
T  8529401 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgctgtttacttttg 8529500  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattca 194  Q
          |||| | |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8529501 t-----tttggactatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattca 8529595  T
Q  195 caacaac 201  Q
    |||||||    
T  8529596 caacaac 8529602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 4558445 - 4558640
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||                
T  4558445 tgctctctcccccagact-ggtcatcattagaccgaactgggtaaacaaattcatgtgttcttctttttccttttatctcttgctgtt------aatttt 4558537  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaa 197  Q
     |||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  4558538 tgtttgaattatttgatacccgcttgatttgattacttggtaataatttgctccacgcatcaagtttattattggtgtggttttctcaacgaattcacaa 4558637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 36769613 - 36769803
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||  |||||              
T  36769613 tgctctctcccccagactaggtcatcattagaccgaactggataaacaaattcttgtgttctccttcttccttttatctcttgtcgtttg------cttt 36769706  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattca 194  Q
     |||||||||||||| ||||| ||||||||||||||||| |||||||||||| |||||||||||||  |||||||||||||||||||||||||||||    
T  36769707 tgtttgaattatttgctacccacttgatttgattacttgatattaatttgcttcacgcatcaagtttattattggtgtggttttcacaacgaattca 36769803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 36771530 - 36771725
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||               
T  36771530 tgctctctacgccagactaggtcatcattagaccgaactaggtaaacaaattcttgtgttctccttcttccttttatctcttgccgttt------acttt 36771623  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaa 197  Q
     |||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||  |||||| ||||||||||||||| |||||||||    
T  36771624 tgtttgaattatttgctacccgcttgatttgattatttggtattaatttgctcaacgcatcaagtttattattgttgtggttttcacaacaaattcacaa 36771723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 15312453 - 15312650
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||| |     ||||||||||||||||||||||||              
T  15312453 tctctcccccagactaggtcatcattagaccgaactaggtaaacaaattctcatgttctttctctctcttccttttatctcttgctgttt------actt 15312546  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcaca 196  Q
      ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  15312547 ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggttttctcaacgaattcaca 15312646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15317092 - 15317290
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |     ||||||||||||||||||||||||           
T  15317092 tgctctctcccc-agactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgctgttt------a 15317184  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattc 193  Q
         ||||| |||||||| ||||||||||||| |||||||||||||| |||||||||| ||||||||  ||||||||||||||||||| ||||||||||    
T  15317185 cttttgtttggattatttgctacccgcttgattggattacttggtattcatttgctccatgcatcaagttttttattggtgtggttttctcaacgaattc 15317284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 9 - 201
Target Start/End: Original strand, 47566636 - 47566823
Alignment:
Q  9 cccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnnngtttgaa 107  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| |||||| ||||||||||||||||||| |||||            |||||||    
T  47566636 cccccagactaggtcatcattagaccgaac--ggtaaacaaattcttgagttctccttcttccttttatctcttgttgttt------tcttttgtttgaa 47566727  T
Q  108 ttatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaacaac 201  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  47566728 ttatttgatatccgcttgatttgattacttggtattaatttgctccatgcatcaagtttattattggtgtggttttctcaaagaattcacaacaac 47566823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 7050305 - 7050124
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||||||||||||||||||||||||             ||||||||||||| ||||| |||||||||||||||||||               
T  7050305 tgctctctcccccagactaggtcatcattagaccgaa-------------ttcttgtgttctccttctttcttttatctcttgctgttt------aattt 7050225  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
     ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7050224 tgtttgaattatatgctacccgcttgatttgataacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 7050125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 15831275 - 15831478
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------------tcttccttttatctcttgctgt 86  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |             |||| |||||||||||||||||    
T  15831275 tgctctctcccccagactaggtcatcattagaccgaactggataaacaaatatcttgtgttctttctctctctctctctctttcttttatctcttgctgt 15831374  T
Q  87 ttgnnnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcaca 185  Q
    ||            ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  15831375 tt----------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctca 15831464  T
Q  186 acgaattcacaaca 199  Q
    ||||||||||||||    
T  15831465 acgaattcacaaca 15831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 16489483 - 16489681
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttc----tct-tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||    ||| |||| |||||||||||||||||||           
T  16489483 tgctctctccct-agactaggtcatcattagaccgaactaggtaaacaaattattgtgttcgttctctctcttacttttatctcttgctgtttacttttg 16489581  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattca 194  Q
          |||| |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  16489582 t-----tttggattatttgctacccgcttgatttgattacttgatattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattca 16489676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 55822398 - 55822592
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---tcttccttttatctcttgctgtttgnnnnnnn 96  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| |||   |||  |||||||||||||||||||            
T  55822398 tgctctctcccc-atactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttttctctctctctcttttatctcttgctgttt-------- 55822488  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 195  Q
        ||||| |||| ||| ||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||||||| | |||||| ||||||||||||    
T  55822489 -tttgtttggattaattgctacccgcctgatttgattacttgatattaatttgctccacacatcaagtttttattggtatagttttctcaacgaattcac 55822587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 11853797 - 11853898
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcacaac 198  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||||||||||||    
T  11853797 gtttggattatttgctacccgcttgatttgattgcttggtattaatttgctccacccatcaagttttttattggtgtggttttctcaacgaattcacaac 11853896  T
Q  199 aa 200  Q
    ||    
T  11853897 aa 11853898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 31300558 - 31300645
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgttt 88  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  31300558 tgctctctcccc-agactaggtcatcattagaccgaactgggtaaacaaattattgtgttctctttcttccttttatctcttgctgttt 31300645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 25614004 - 25613810
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| |||  |||||||||||| |||               
T  25614004 tgctctctcccccagagtaggtcatcattagaccgaactaggtaaacaaattcttgtgttctccttcctcc-attatctcttgctattt------atttt 25613912  T
Q  100 ngtttgaattatttgtt-acccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcaca 196  Q
     ||||||||||||| || ||| |||||||||||||  ||||| ||||||||||| || |||||||  |||||||||||| |||||  ||||||||||| |    
T  25613911 tgtttgaattattttttcacctgcttgatttgattgtttggttttaatttgctcaacacatcaagttttttattggtgt-gtttttgcaacgaattcata 25613813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11853682 - 11853742
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgtt 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11853682 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 11853742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 480 - 550
Target Start/End: Original strand, 16187269 - 16187339
Alignment:
Q  480 atcaagatgaattacctgttcccttcttttcaattcagcctctctagcttgaagttctttctcctttgctt 550  Q
    |||| |||| || |||||||||||| |||||||||||| ||||| |||||||||||| |||||||||||||    
T  16187269 atcaggatggatcacctgttccctttttttcaattcagactctcgagcttgaagttccttctcctttgctt 16187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16455528 - 16455590
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct 64  Q
    ||||||||||||||||||||||||   || ||||||||||||| ||||||||||||||||||||    
T  16455528 tgctctctcccccagactaggtcaat-ttggaccgaactgggtcaacaaattcttgtgttctct 16455590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 14789473 - 14789397
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctct 80  Q
    ||||||||||||||||||||||   || ||||||||||||| ||||||||||||||||||  ||||| |||| |||||    
T  14789473 ctctctcccccagactaggtcaat-ttggaccgaactgggtcaacaaattcttgtgttcttctcttctttttctctct 14789397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 3578716 - 3578668
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||||||||||| ||  ||||||||||||||||||||||||||    
T  3578716 tctctcccccagactaggccagtattagaccgaactgggtaaacaaatt 3578668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 16185882 - 16185818
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||||||||||||||||||   || |||||||||||||||||||| ||| ||||||||||    
T  16185882 tgctctctcccccagactaggtcagttttggaccgaactgggtaaacaaatttcgtgtgttctct 16185818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 16638965 - 16639048
Alignment:
Q  5 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgttt 88  Q
    ||||| |||||| |||||||| ||||||| ||||||||||||||||| |||||| | | ||| |||| |||||||||||||||||    
T  16638965 ctctctcccagagtaggtcataattagactgaactgggtaaacaaatccttgtgatatccttattcc-tttatctcttgctgttt 16639048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 31300677 - 31300733
Alignment:
Q  145 atttgctccacgcatcaagtttt-attggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||| ||||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  31300677 atttgcttcacgcatcaagtttttattggtgtggttttctcaacgaattcataacaa 31300733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 199
Target Start/End: Complemental strand, 4874410 - 4874336
Alignment:
Q  124 tgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    |||||||||| |||||| ||||| ||||||||  |||||||||| |||||||| ||||  ||||||||||||||||    
T  4874410 tgatttgattgcttggt-ttaatatgctccacatatcaagttttgttggtgtgatttttgcaacgaattcacaaca 4874336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9148538 - 9148591
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||||    
T  9148538 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattctt 9148591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 16631319 - 16631404
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgttt 88  Q
    |||||||||||||| |||||||| |||||||  |||||||||| |||||  ||||||| | |||||||| ||||||||||| |||||    
T  16631319 ctctctcccccagagtaggtcataattagactaaactgggtaatcaaatcattgtgttatccttcttcc-tttatctcttgttgttt 16631404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19322980 - 19323034
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||| |||||||||||||    
T  19322980 tgctctctcccccagactaggtcagttttggaccgaactggataaacaaattctt 19323034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 25357928 - 25357986
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgt 59  Q
    |||||||||||| |||||||||||  ||| |||| ||||||||||||||||| ||||||    
T  25357928 tgctctctcccctagactaggtcagtattggacctaactgggtaaacaaatttttgtgt 25357986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 28453971 - 28454033
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||||||||||||| |  ||| |||||||||||||||||||| ||| ||||||||||    
T  28453971 ctctctcccccagactaggttagtattggaccgaactgggtaaacaaatttcgtgtgttctct 28454033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 32273860 - 32273806
Alignment:
Q  145 atttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||||||||  |||||||||||||||||||| ||||  ||||||||||||||||    
T  32273860 atttgctccagacatcaagttttattggtgtgatttttgcaacgaattcacaaca 32273806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 14787474 - 14787398
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctct 80  Q
    ||||||||||||||||||||||   || |||| |||||||| ||||||||||||||||||  ||||| |||| |||||    
T  14787474 ctctctcccccagactaggtcaat-ttggaccaaactgggtcaacaaattcttgtgttcttctcttctttttctctct 14787398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24879276 - 24879354
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat--tcttgtgttctcttcttccttttatctc 79  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||  |||||||||||| |||||||||| ||||    
T  24879276 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctcttgtgttctc-tcttccttttctctc 24879354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 24880738 - 24880816
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat--tcttgtgttctcttcttccttttatctc 79  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||  |||||||||||| |||||||||| ||||    
T  24880738 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctcttgtgttctc-tcttccttttctctc 24880816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 10114603 - 10114667
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||||||||||||||||||  ||| ||||||| | |||||||||| ||| ||||||||||    
T  10114603 tgctctctcccccagactaggtcagtattggaccgaattaggtaaacaaatttcatgtgttctct 10114667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 4215592 - 4215657
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctctt 65  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  ||||||||||||    
T  4215592 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttctctt 4215657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7941609 - 7941678
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttc 69  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  ||||||||| ||||||    
T  7941609 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttcttttcttc 7941678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16931836 - 16931786
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  16931836 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 16931786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16934190 - 16934140
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  16934190 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 16934140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18537521 - 18537470
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||||||| | ||||||||  || ||||||||||||||||||||||    
T  18537521 tgctctctcccccataataggtcattttttgaccgaactgggtaaacaaatt 18537470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 18709211 - 18709161
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  18709211 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 18709161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26557871 - 26557922
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||| ||||  ||| ||||||||| ||||||||||||    
T  26557871 tgctctctcccccagactaagtcagtattggaccgaactaggtaaacaaatt 26557922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36378579 - 36378629
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||   || ||||||||||||||||||||||    
T  36378579 tgctctctcccccagactaggtca-atttggaccgaactgggtaaacaaatt 36378629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5635523 - 5635470
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  5635523 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 5635470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6765130 - 6765183
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  6765130 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 6765183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8631466 - 8631413
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  8631466 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 8631413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 9864000 - 9864062
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||| ||||||||||| ||||  ||| |||||||||||||||||||| ||| ||||||||||    
T  9864000 ctctcccccccagactaagtcagtattggaccgaactgggtaaacaaatttcgtgtgttctct 9864062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 16639075 - 16639155
Alignment:
Q  119 ccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||||||||| |||||| ||| |||||||||| ||||||| |||||||||| | |||||  ||| |||||||||||||    
T  16639075 ccgcttgatttgattgcttggtttta-tttgctccacacatcaagtttttattggtat-gtttttgcaaagaattcacaacaa 16639155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17662292 - 17662239
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  17662292 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 17662239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22780420 - 22780371
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  22780420 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaat 22780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22800909 - 22800856
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  22800909 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 22800856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24889082 - 24889135
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  24889082 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 24889135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36380636 - 36380689
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || || ||||||||||||||||||||||    
T  36380636 tgctctctcccccagactaggtca-atttggagcgaactgggtaaacaaattctt 36380689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 37089419 - 37089366
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  37089419 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 37089366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38928224 - 38928171
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  38928224 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 38928171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40637360 - 40637413
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  40637360 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 40637413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44599885 - 44599836
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  44599885 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaat 44599836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 22295451 - 22295523
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctcttcttccttt 73  Q
    |||||||||||||| |||||| ||  ||| ||| |||||||||||||||| ||| ||||||||| |||||||||    
T  22295451 tgctctctcccccacactagggcagtattggactgaactgggtaaacaaatttcatgtgttctc-tcttccttt 22295523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10047430 - 10047383
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  10047430 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 10047383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 117 - 200
Target Start/End: Original strand, 16631430 - 16631512
Alignment:
Q  117 acccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||||||||||| |||||| || |||||||||| | |||||| |||||||||| | |||||  |||| ||||||||||||    
T  16631430 acccgcttgatttgatttcttggt-tttatttgctccatggatcaagtttttattggt-ttgtttttgcaacaaattcacaacaa 16631512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31849646 - 31849593
Alignment:
Q  1 tgctctctcccccagactaggtcatcattag-accgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||  ||| | |||||||||||| |||||||||||    
T  31849646 tgctctctcccccagactaggtca--atttgaaccgaactgggtcaacaaattctt 31849593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38890272 - 38890208
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||||| ||| |||||||   || |||||||||||||||||||| ||| ||||||||||    
T  38890272 tgctctctccccaagattaggtcagttttggaccgaactgggtaaacaaatttcgtgtgttctct 38890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39246045 - 39245998
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  39246045 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 39245998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 123; Significance: 6e-63; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 25941803 - 25942001
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||            
T  25941803 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttccttttatctcttgctgttt------at 25941896  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 195  Q
        ||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  25941897 ttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgttccacgcatcaagtttttattggtgtggttttctcaacgaattcac 25941996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 22351900 - 22351703
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    ||||||||||||||||||||||||||            
T  22351900 tgctctctcccccagactaggtcatcattagac-gaactgggtaaacaaattcttgtgttcttcttcttcttccttttatctcttgctgtttacttttgt 22351802  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcaca 196  Q
         |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  22351801 -----tttggattatttgttacccgcttgatttgattacttggtattaatttgctccacacatcaagttttattggtgtgatttttacaacgaattcaca 22351707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 25465947 - 25465754
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctcttgctgtttgnnnnnnnnnnn 100  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||                
T  25465947 tgctctctcccccagactaggccatcattagaccgaactgggtaaacaaattattgtgttct--tcttccttttatctcttgctgttt----tatttttt 25465854  T
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  25465853 gtttggattatttgctacacgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 25465754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 3577537 - 3577338
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-------cttcttccttttatctcttgctgtttgnnnn 93  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||         
T  3577537 tgctctctcccc-agactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttcttccttttatctcttgctgttt----- 3577444  T
Q  94 nnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaatt 192  Q
           ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  3577443 -acttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaatt 3577345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 22342849 - 22342648
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||            
T  22342849 tgctctctcccctagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcatcttcttccttttatctcttgctgttt------ac 22342756  T
Q  97 nnnngtt-tgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcac 195  Q
        ||| || |||||||| ||||||||||||||||||| |||||||||||||||||||  |||||||||||||||||||| |||| |||||||||||||    
T  22342755 ttttgttatggattatttgctacccgcttgatttgattatttggtattaatttgctccatacatcaagttttattggtgtgatttttacaacgaattcac 22342656  T
Q  196 aacaacat 203  Q
    ||||||||    
T  22342655 aacaacat 22342648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 33215961 - 33216160
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctt-cttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |              
T  33215961 tgctctatcccccatactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctttcttccgtttatctcttgctgttcgtttatttt-- 33216058  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcacaa 197  Q
     ||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||| ||||||||||    
T  33216059 -gtttggattatttgctacccgcttgatatgattacttggtattaatttgctccacgcatcaagttttttattggtgtggtttttacaaggaattcacaa 33216157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 12166194 - 12166010
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttctt-ccttttatctcttgctgtttgnnnnnnnnn 98  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||  ||||              
T  12166194 tgctatctcccctagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctccttctttccttttatctcttgtcgttt------actt 12166101  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaac 187  Q
      |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12166100 ttgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaac 12166010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 17694900 - 17694700
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |     |||||||||||||| |||||||||           
T  17694900 tgctctctcccctagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctattgctgtttacttttg 17694801  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattca 194  Q
          |||| |||||||| || ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||    
T  17694800 t-----tttggattatttgctatccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggttttctcaacgaattca 17694706  T
Q  195 caacaa 200  Q
    ||||||    
T  17694705 caacaa 17694700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 13883608 - 13883806
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       |||  |||||||||||||||||||        
T  13883608 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctatctctctctctctcttttatctcttgctgttt---- 13883703  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaa 190  Q
            ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||    
T  13883704 ------ttgtttggattatttgctacccgtttgatttgattacttggtattaatttgctccacgcatcaagttttttattggtgtggttttctcaacgaa 13883797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 13467514 - 13467318
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttcctttt--atctcttgctgtttgnnnnnnnn 97  Q
    |||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||  ||||||| ||||||             
T  13467514 tgctctctcccc-agactaggtcatgattagaccgaactaggtaaacaaattcttgtgttctccttcttccttttttatctcttactgttt------act 13467422  T
Q  98 nnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaa--gttttattggtgtggttttcacaacgaattcac 195  Q
       |||||||| ||||| |||||| |||||||||||||||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||    
T  13467421 tttgtttgaatcatttgctacccgtttgatttgattacttggtattaatttactccacgcatcaaattttttattggtgtggttttcacaacgaattcac 13467322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 26643312 - 26643497
Alignment:
Q  5 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnnngtt 103  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||            |||    
T  26643312 ctctcccccagaccaggtcatctttacaccgaactgggtaaacaaattcttgtgttctccttcttccttctatctcttactgttt------acttttgtt 26643405  T
Q  104 tgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcaca 196  Q
    ||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  26643406 tgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaagttttattggtgtgctttt-acaactaattcaca 26643497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 5 - 196
Target Start/End: Original strand, 26749278 - 26749463
Alignment:
Q  5 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnnngtt 103  Q
    ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||            |||    
T  26749278 ctctcccccagaccaggtcatctttacaccgaactgggtaaacaaattcttgtgttctccttcttccttctatctcttactgttt------acttttgtt 26749371  T
Q  104 tgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcaca 196  Q
    ||||||||||  || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  26749372 tgaattattttctatccgcttgatttcattacttggtattaatttgctccacgcatcaagttttattggtgtgctttt-acaactaattcaca 26749463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 31248643 - 31248544
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  31248643 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 31248544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 17038368 - 17038551
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---------tcttccttttatctcttgctgtttgn 90  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |         |||||||||||| |||||||||||      
T  17038368 tgctctctcccccagacttggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctcttccttttatttcttgctgttt-- 17038465  T
Q  91 nnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttca 183  Q
              ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  17038466 --------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagtttttattggtgtgattttca 17038551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 16786166 - 16786265
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||| ||||||||||||    
T  16786166 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtcttattgttgtggttttctcaacaaattcacaacaa 16786265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 5 - 200
Target Start/End: Complemental strand, 26887271 - 26887076
Alignment:
Q  5 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tct-tccttttatctcttgctgtttgnnnnnn 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||| |||||||||||||||||| ||           
T  26887271 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctccttttatctcttgctggtt------- 26887179  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattca 194  Q
         ||||| |||| ||| |||||||||| |||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||| | |||||||||    
T  26887178 ---ttgtttggattaattgctacccgcttgttttgattacttgatattaatttgctccacacatcaagtttttattggtgtggttttctcgacgaattca 26887082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 30987454 - 30987356
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||    
T  30987454 gtttggattatttgctacccacttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggtttcctcgtcgaattcacaaca 30987356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 13878970 - 13879071
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaattcacaac 198  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||| |||||||||||||||    
T  13878970 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttttttggtgtggtttttctcaacgaattcacaac 13879069  T
Q  199 aa 200  Q
    ||    
T  13879070 aa 13879071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 17065986 - 17066179
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||| ||| ||| ||||| |||||||| |||||||||||||||||               
T  17065986 tgctctctcccccaaagtaggtcatcattagaccgaactggataaacagattattgggttctccttcttcc-tttatctcttgctgttt------atttt 17066078  T
Q  100 ngtttgaattat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcaca 196  Q
     ||||||||||| |||| ||| ||||||||||||| |||| | ||||||| |||||||||||| |  ||||||||||||||||||||||| |||||||||    
T  17066079 tgtttgaattatattgtcaccagcttgatttgattgcttgattttaatttactccacgcatcaggttttttattggtgtggttttcacaatgaattcaca 17066178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 35201255 - 35201156
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||    
T  35201255 gtttggattatttgctacccgcttgatttgattactt-gtattaatttgctccacgcatcaagtttttattagtgtggttttctcaacgaattcacaaca 35201157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 19701856 - 19701756
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt--tattggtgtggttttcacaacgaattcacaac 198  Q
    |||||||||||||| || ||| |||||||||||||||||| |||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  19701856 gtttgaattatttgctatccgtttgatttgattacttggt-ttaatttgttccacgcatcaagtttattattggtgtggttttcacaacgaattcacaac 19701758  T
Q  199 aa 200  Q
    ||    
T  19701757 aa 19701756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 122 - 200
Target Start/End: Complemental strand, 5165772 - 5165692
Alignment:
Q  122 cttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||||| ||||    
T  5165772 cttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtgtttttcacaacgaattcacgacaa 5165692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13878860 - 13878922
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttct 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13878860 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 13878922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 16786052 - 16786114
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttct 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  16786052 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 16786114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 35201375 - 35201311
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct 64  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  35201375 tgctctctccccaagactaggtcattattagaccgaactgggtaaacaaatatcttgtgttctct 35201311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11262726 - 11262790
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||||||||||||||||||  ||| |||||||| ||||||||||| ||| ||||||||||    
T  11262726 tgctctctcccccagactaggtcagtattggaccgaacggggtaaacaaatttcgtgtgttctct 11262790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19696708 - 19696772
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||| ||||||||||||||  ||| |||||||||||||||||||| ||| ||||||||||    
T  19696708 tgctctctctcccagactaggtcagtattggaccgaactgggtaaacaaatttcgtgtgttctct 19696772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22858000 - 22857936
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||||||||||||||||||  ||| |||||||||| ||||||||| ||| ||||||||||    
T  22858000 tgctctctcccccagactaggtcagtattggaccgaactgtgtaaacaaatttcgtgtgttctct 22857936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 62
Target Start/End: Complemental strand, 31248761 - 31248701
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttct 62  Q
    |||||||||| | ||||||||||||||| |||||||| ||||||||||| |||||||||||    
T  31248761 ctctctcccctatactaggtcatcattataccgaacttggtaaacaaatatcttgtgttct 31248701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5165861 - 5165818
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggta 44  Q
    |||| ||||||||||| |||||||||||||||||||||||||||    
T  5165861 tgctatctcccccagagtaggtcatcattagaccgaactgggta 5165818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 30443555 - 30443613
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgt 59  Q
    |||||||||||| ||||||||| |  ||| |||||||||||||||||||||| ||||||    
T  30443555 tgctctctccccgagactaggtaagtattggaccgaactgggtaaacaaatttttgtgt 30443613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 155
Target Start/End: Complemental strand, 5165805 - 5165772
Alignment:
Q  122 cttgatttgattacttggtattaatttgctccac 155  Q
    ||||||||||||||||||||||||||||||||||    
T  5165805 cttgatttgattacttggtattaatttgctccac 5165772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 10584359 - 10584414
Alignment:
Q  147 ttgctccacgcatcaagttt--tattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| ||||||||||  |||||||||||||||| || ||||||||||||||    
T  10584359 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaa 10584414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 15346614 - 15346677
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||||||||||||||||||   || |||||||||||||||||||| ||| ||||||||||    
T  15346614 tgctctctcccccagactaggtca-atttggaccgaactgggtaaacaaatttcgtgtgttctct 15346677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 17012310 - 17012358
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||||||||||||||  ||| ||||||||| ||||||||||||    
T  17012310 tctctcccccagactaggtcagtattggaccgaactaggtaaacaaatt 17012358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29754756 - 29754705
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  29754756 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 29754705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 16455472 - 16455421
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||||||| |||||||||  ||| |||||||||| |||||||||||    
T  16455472 tgctctctcccccatactaggtcagtattggaccgaactgagtaaacaaatt 16455421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 26932609 - 26932559
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  26932609 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 26932559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 33309123 - 33309173
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  33309123 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 33309173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1230296 - 1230243
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  1230296 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 1230243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4816278 - 4816225
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  4816278 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 4816225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7294062 - 7294120
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgt 59  Q
    |||||||||||||||| |||||||  ||| |||| |||||| |||||||||| ||||||    
T  7294062 tgctctctcccccagagtaggtcagtattggaccaaactggataaacaaatttttgtgt 7294120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11983076 - 11983023
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  11983076 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 11983023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13040022 - 13040075
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    |||||||||||| |||||||||||   |||||||||||||||| |||||||||||    
T  13040022 tgctctctcccctagactaggtcaat-ttagaccgaactgggtcaacaaattctt 13040075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14458814 - 14458761
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  14458814 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 14458761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14507223 - 14507170
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  14507223 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 14507170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 20915403 - 20915342
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttct 62  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||| ||||||||    
T  20915403 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctctgtgttct 20915342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 28078242 - 28078177
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctctt 65  Q
    ||||||||||| || |||||||||   ||||||||||| ||||||||||| ||| |||||||||||    
T  28078242 tgctctctccctcatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctt 28078177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5757524 - 5757571
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  5757524 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 5757571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12195562 - 12195515
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||    
T  12195562 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaa 12195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 25465638 - 25465574
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttctct 64  Q
    ||||||||| |||| |||| ||||  ||| |||||||||||||||||||||| | ||||||||||    
T  25465638 tgctctctctcccatactatgtcagtattggaccgaactgggtaaacaaattttgtgtgttctct 25465574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 2e-60; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 44016709 - 44016513
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||               
T  44016709 tgctctctcccccagactaggtcatcattagaccgaattgggtaaacaaattcttgtgttctccttcttccttttatctcttgttgttt------acttt 44016616  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaa 197  Q
     |||| ||||||||| || || ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  44016615 tgttttaattatttgctatccacttgatttgattacttggtattaatttgctccacgcatcaagtttattattggtgtggttttcacaacgaattcacaa 44016516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 44143914 - 44143722
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||| |||||||||||||||||||||||| ||| |||||||||||||| |||||| |||||||||||||||||||||||||               
T  44143914 tgctctctcccc-agactaggtcatcattagaccgaattggataaacaaattcttgcgttctccttcttccttttatctcttgctgttt------acttt 44143822  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  44143821 tgtttgaattatttgctacccgcttgatttgattacttggtattaatttgctccatgcatcaagttttattggtgtggttttcacaacgaattcgcaaca 44143722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 25351488 - 25351684
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |     ||||||||||||||||||||||||              
T  25351488 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctttctctctcttccttttatctcttgctgttt------actt 25351581  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaa 197  Q
      ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  25351582 ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaa 25351681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 7464567 - 7464364
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||            
T  7464567 tgctctcttccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttccttttatctcttgctgttttttttttt 7464468  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcac 195  Q
         |||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  7464467 tttt-tttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcac 7464369  T
Q  196 aacaa 200  Q
    |||||    
T  7464368 aacaa 7464364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 34546928 - 34546734
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttc----tcttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||| ||||||||||||            
T  34546928 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttccttttacctcttgctgttt------at 34546835  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcaca 196  Q
        ||||| |||||||| ||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||    
T  34546834 ttttgtttggattatttgctacccgcttaatttgattacttgatattaatttgttccacgcatcaagttttattggtgtggttttctcaacaaattcaca 34546735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 8378552 - 8378357
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||||||||||||||||||||||||        
T  8378552 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctcttccttttatctcttgctgttt---- 8378457  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaatt 192  Q
            ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  8378456 -------tgtttggattatttgctacccgcttaatttgattacttggtattaatttgctccacgcatcaagttttattggtctggttttctcaacgaatt 8378364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 44010798 - 44010602
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||               
T  44010798 tgctctctcccccagactaggtcatcattagaccgaacttggtaaacaaattattgtgttctccttcttccttttatctcttgctgttt------acttt 44010705  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaa 197  Q
     |||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||| ||  |||||||||| ||||||| |||||||||||||    
T  44010704 tgtttgaattatttgctatccgcttgatttgattacttgatattaatttgctccatgcatcaaatttattattggtgtagttttcagaacgaattcacaa 44010605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 2075249 - 2075438
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttcctt-ttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||| |||               
T  2075249 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc--cttcctccttatctcttgctattt----------t 2075336  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattcacaa 197  Q
     ||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||  |||| ||||||||||||||    
T  2075337 tgtttggattatttgctacccgcttgttttgattacttggtattaatttgctccacgcatcaagttttttattggtgtg--tttctcaacgaattcacaa 2075434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 30247104 - 30247303
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctctt-----cttccttttatctcttgctgtttgnnnnnn 95  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |      |||||||||||||||||| ||||           
T  30247104 tgctatctcccccagactaggtcatcattagaccaaactgggtaaacaaattattgtgttctttctctcccttccttttatctcttgccgttt------a 30247197  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattc 193  Q
         ||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| ||||||||||    
T  30247198 tttttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccgcgcatcaagttttttattggtgtggttttctcaacgaattc 30247297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 2121033 - 2121229
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttc----tcttcttccttttatctcttgctgtttgnnnnnnn 96  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    |||||||||||||||||||||||||||            
T  2121033 tgctctctcccccagactaggtcatcattagaccgaattgggtaaacaaattcttgtgttcatcttcttcttccttttatctcttgctgttt-----tac 2121127  T
Q  97 nnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttt-tattggtgtggttttcacaacgaattcac 195  Q
        ||||| |||| ||| || || |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||  |||| ||||||||||||    
T  2121128 ttttgtttggattaattgctatccacttgatttgattgcttggtattaatttgctccacacatcaagtttatattggtgtg--tttctcaacgaattcac 2121225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 42006797 - 42006993
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||| |||| ||||||               
T  42006797 tgctctctctcccagactaggtcatcattagaccgaactgcgtaaacaaattcatgtattctccttcttccttttatttcttactgttt------acttt 42006890  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcacaa 197  Q
     |||||||||||||| ||| |||||||||||||||||| ||||||||||||| |||||||||||||  ||||| || |||||||||| ||||||||||||    
T  42006891 tgtttgaattatttgatactcgcttgatttgattactttgtattaatttgcttcacgcatcaagtttattatttgtatggttttcactacgaattcacaa 42006990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 25357182 - 25357379
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtg----ttctct-tcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||| |||||||| |||||||||||||||              
T  25357182 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgtcctttctctctcttccttctatctcttgctgttt------tatt 25357275  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcaca 196  Q
       |||  |||||||| ||||||||||||||||||||||| ||||| |||||||||| |||||||||  ||||||||||||||||| ||||||||| |||    
T  25357276 ttcttttgattatttgctacccgcttgatttgattacttgatattattttgctccacacatcaagtttgttattggtgtggttttctcaacgaattgaca 25357375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 7070028 - 7070127
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  7070028 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctctacgaattcacaacaa 7070127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 25405646 - 25405746
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  25405646 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 25405745  T
Q  200 a 200  Q
    |    
T  25405746 a 25405746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 15541044 - 15540843
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctcttcttc---------cttttatctcttgctgtttgn 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||  ||         |||||||| ||||||||||      
T  15541044 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttttctctctctctctcttttatcgcttgctgttt-- 15540947  T
Q  91 nnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacg 188  Q
              ||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||    
T  15540946 --------ttgtttggattatttgctatccgcttgttttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacg 15540855  T
Q  189 aattcacaacaa 200  Q
    ||||||||||||    
T  15540854 aattcacaacaa 15540843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 25410264 - 25410463
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtg----ttctct---tcttccttttatctcttgctgtttgnnnn 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||   |||||||| |||||||||||||||         
T  25410264 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgtcctttctctctctcttccttctatctcttgctgttt----- 25410358  T
Q  94 nnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaat 191  Q
           ||||| |||||||| ||||||||||||||||||||||| ||||| ||||||| || |||||||||  ||||| ||||| ||||| |||| |||    
T  25410359 -tattttgtttggattatttgctacccgcttgatttgattacttgatattattttgctcaacacatcaagtttgttattagtgtgattttctcaacaaat 25410457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 7075029 - 7075127
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  7075029 gtttggattatttgctacccgcttgatttgattacttggtattaattttctccacgcatcaagttttattggtgtgattttctctacgaattcacaaca 7075127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 3324737 - 3324636
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaattcacaac 198  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  3324737 gtttgcattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaattcacaac 3324638  T
Q  199 aa 200  Q
    ||    
T  3324637 aa 3324636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 3319969 - 3319869
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaacgaattcacaac 198  Q
    ||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||    
T  3319969 gtttggattaattgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggtttttctcaacgaattcacaac 3319870  T
Q  199 a 199  Q
    |    
T  3319869 a 3319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 21369776 - 21369970
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt-cttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    |||||||||| ||| | |||||||||||| ||||||||||||||||||| || |||||| |||| ||| |||||| ||||||||||||||              
T  21369776 tgctctctccgccatagtaggtcatcattggaccgaactgggtaaacaattttcttgtggtctccttcatccttt-atctcttgctgtttattttta--- 21369871  T
Q  99 nngtttgaattattt-gttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattcac 195  Q
       |||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||  ||||| ||||| |||||||| |||||||||    
T  21369872 ---tttgaattattttgtcacccgcttgatttgattacttagtattaatttgctccacgcatcaaatttattattagtgtgcttttcacaccgaattcac 21369968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44512573 - 44512483
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgtt----ctcttcttccttttatctcttgctgttt 88  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||     |||||||||||||||||||||||||||    
T  44512573 tgctctctccct-agactaggtcatcattagaccgaactgggtaaacaaattcttgtgttattcttcttcttccttttatctcttgctgttt 44512483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3320099 - 3320035
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3320099 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctct 3320035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 3324847 - 3324783
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct 64  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3324847 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctct 3324783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 25405526 - 25405588
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttct 62  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  25405526 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 25405588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7069913 - 7069963
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7069913 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 7069963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 5 - 62
Target Start/End: Original strand, 7074924 - 7074982
Alignment:
Q  5 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttct 62  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  7074924 ctctcccccagactaggtcatcattagaccgaaccgggtaaacaaatatcttgtgttct 7074982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 200
Target Start/End: Complemental strand, 44512423 - 44512362
Alignment:
Q  141 attaatttgctccacgcatcaagtttt--attggtgtggttttcacaacgaattcacaacaa 200  Q
    |||||||||||||||||||||||||||  ||||||||| ||||| |||||||||||||||||    
T  44512423 attaatttgctccacgcatcaagttttttattggtgtgtttttctcaacgaattcacaacaa 44512362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11081752 - 11081816
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttctct 64  Q
    ||||||||||||||||||||||||  ||| |||||||||||||||||||||| | ||||||||||    
T  11081752 tgctctctcccccagactaggtcaatattggaccgaactgggtaaacaaattttgtgtgttctct 11081816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 24813545 - 24813467
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttctcttcttccttttatctc 79  Q
    |||| |||||||||||||||||||   || |||||||||||||||||||||| | ||||||||| |||||||||| ||||    
T  24813545 tgctttctcccccagactaggtcagttttggaccgaactgggtaaacaaattttgtgtgttctc-tcttccttttctctc 24813467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6067246 - 6067193
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct 54  Q
    |||||||||||||| |||||||||  ||| ||||| ||||||||||||||||||    
T  6067246 tgctctctcccccatactaggtcagtattggaccggactgggtaaacaaattct 6067193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 6332466 - 6332527
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||||| |||||||||||  ||| |||||||||||||||||||| ||| ||||||||||    
T  6332466 tctctcccctagactaggtcagtattggaccgaactgggtaaacaaatttcgtgtgttctct 6332527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 13099521 - 13099443
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttccttttatctc 79  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  |||||||||| |||||||||| ||||    
T  13099521 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttctc-tcttccttttctctc 13099443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2935510 - 2935572
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt--cttgtgttct 62  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||  ||||||||||    
T  2935510 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatttccttgtgttct 2935572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9190054 - 9190101
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| |||||    
T  9190054 tgctctctcccccagactaggtcat-attggaccgaactgggtcaacaa 9190101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 64
Target Start/End: Complemental strand, 20091196 - 20091140
Alignment:
Q  8 tcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct 64  Q
    |||||||||||||||||  ||| ||||||||||| |||| |||||| ||||||||||    
T  20091196 tcccccagactaggtcagtattggaccgaactggataaataaattcgtgtgttctct 20091140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22108308 - 22108359
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  22108308 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 22108359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22137319 - 22137370
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  22137319 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 22137370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 24748981 - 24749036
Alignment:
Q  147 ttgctccacgcatcaagttt--tattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| ||||||||||  |||||||||||||||| || ||||||||||||||    
T  24748981 ttgctccacacatcaagtttgttattggtgtggttttctcatcgaattcacaacaa 24749036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28617271 - 28617318
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  28617271 tgctctctcccccagagtaggtcat-attggaccgaactgggtaaacaa 28617318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40550068 - 40550119
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  40550068 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 40550119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40552346 - 40552397
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  40552346 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 40552397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9027241 - 9027191
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  9027241 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 9027191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 27306277 - 27306215
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct 64  Q
    |||||||||||| |||||||||||   || |||| |||||||| ||||||||||||||||||||    
T  27306277 tgctctctcccctagactaggtcaat-ttggaccaaactgggtcaacaaattcttgtgttctct 27306215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31155958 - 31155908
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  31155958 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 31155908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 40946570 - 40946636
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttctt 68  Q
    ||||||||||||||||||||||||   || ||||||||||||| ||||||||||| |||  |||||||    
T  40946570 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttcttctt 40946636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 200
Target Start/End: Original strand, 45366817 - 45366912
Alignment:
Q  103 ttgaattat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| |||| | ||||||||||| ||| |||||| |  |||| |||||| ||||||||||||||| | || |||| ||||||||||||||||||    
T  45366817 ttgaattatattgtcagccgcttgatttaattgcttggttt--atttcctccacacatcaagttttattgatttgatttt-acaacgaattcacaacaa 45366912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1049343 - 1049290
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  1049343 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 1049290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 3035966 - 3036019
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  3035966 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 3036019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 7472027 - 7471974
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  7472027 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 7471974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11759369 - 11759422
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  11759369 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 11759422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Original strand, 18345937 - 18345990
Alignment:
Q  147 ttgctccacgcatcaagtt-ttattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| ||||||||| || |||||||| |||||||||||||||||||||||    
T  18345937 ttgctccacacatcaagttgttgttggtgtg-ttttcacaacgaattcacaacaa 18345990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20299702 - 20299755
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  20299702 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 20299755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20626280 - 20626333
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  20626280 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 20626333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20630171 - 20630224
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  20630171 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 20630224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 20642590 - 20642643
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  20642590 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 20642643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 38394228 - 38394281
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  38394228 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 38394281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40836790 - 40836737
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  40836790 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 40836737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44724821 - 44724874
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  44724821 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 44724874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 48457895 - 48457948
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  48457895 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 48457948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1606621 - 1606683
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt--cttgtgttct 62  Q
    |||||||||||||||||||| |||  ||| ||||||||||||| ||||||||  ||||||||||    
T  1606621 tgctctctcccccagactagatca-gattggaccgaactgggtcaacaaatttccttgtgttct 1606683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2580441 - 2580394
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    ||||||||||||||||||||||||| ||| ||||||| ||||| |||||    
T  2580441 tgctctctcccccagactaggtcat-attggaccgaattgggtcaacaa 2580394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 13290517 - 13290457
Alignment:
Q  5 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    ||||||| |||||| |||||  ||| |||||||||||||||||||| ||| ||||||||||    
T  13290517 ctctccctcagacttggtcagtattggaccgaactgggtaaacaaatttcgtgtgttctct 13290457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20284140 - 20284093
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  20284140 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 20284093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21983335 - 21983288
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  21983335 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 21983288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33332496 - 33332543
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| |||||| |||||||||| |||||    
T  33332496 tgctctctcccccagattaggtcat-attagatcgaactgggtcaacaa 33332543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 40281430 - 40281366
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttctct 64  Q
    |||||||||||||||||||| |||  ||| ||| |||||| ||||||||||| | ||||||||||    
T  40281430 tgctctctcccccagactagttcagtattggacagaactgtgtaaacaaattttgtgtgttctct 40281366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 2e-56; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 3 - 200
Target Start/End: Complemental strand, 2401267 - 2401073
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct----cttcttccttttatctcttgctgtttgnnnnnnnnn 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||| |||||              
T  2401267 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttcttcttcttccttttatctcttgttgttt-------act 2401175  T
Q  99 nngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaac 198  Q
      ||||| |||| |||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||    
T  2401174 ttgtttggattaattgttatccacttgatttgattacttggtattaatttgctctacgcatcaagttttatttgtgtgattttcacaacgaattcacaac 2401075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 1 - 193
Target Start/End: Complemental strand, 4144731 - 4144543
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-cttcttccttttatctcttgctgtttgnnnnnnnnnn 99  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||               
T  4144731 tgctctctcccccagagtaggtcatcattagaccgaactgggtaaacaaattcttgtgttctccttcttcc-tttatctcttgctgttt------acttt 4144639  T
Q  100 ngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag--ttttattggtgtggttttcacaacgaattc 193  Q
     |||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||||||||    
T  4144638 tgtttgaattatttgctatccgcttgatttgattacttggtattaatttgctccacgtatcaagattattattggtgtggttttcacaacgaattc 4144543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 2393330 - 2393132
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttct-------cttcttccttttatctcttgctgtttgnnnn 93  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||         
T  2393330 tgctctctcccc-agactaggtcatcattagaccgaactggataaacaaattcttgtgttcttcttcttcttcttccttttatctcttgctgttt----- 2393237  T
Q  94 nnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattc 193  Q
           ||||| |||| ||| || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2393236 --actttgtttggattaattgctatccacttgatttgattacttggtattaatttgctccacgcataaagttttattggtgtggttttcacaacgaattc 2393139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 4 - 200
Target Start/End: Original strand, 25134208 - 25134400
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc-ttcttccttttatctcttgctgtttgnnnnnnnnnnngt 102  Q
    ||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||           ||    
T  25134208 tctctcccccatactagatcatcattagaccgaagtgggtaaacaaattcttgtgttctccttcttccttttatcttttgctgtttgttttt------gt 25134301  T
Q  103 ttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatc-aagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    |||||||||||  ||||||||||||||||||| ||| ||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||    
T  25134302 ttgaattatttactacccgcttgatttgattatttgatattaatttacttcacgcatcaaatttttattggtgtggttttcacaacgaattcacaacaa 25134400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 9526600 - 9526797
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-------tcttccttttatctcttgctgtttgnnn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |       ||||||||||||||||||||||||        
T  9526600 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctcttccttttatctcttgctgttt---- 9526695  T
Q  93 nnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtg-gttttcacaacgaat 191  Q
            ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  ||||| ||||||||    
T  9526696 -------tgtttggattatttgctacccgcttgatttgattacttgttattaatttgctccacacatcaagttttattggtgtgatttttctcaacgaat 9526788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 21353396 - 21353196
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctct-----tcttccttttatctcttgctgtttgnnnnnn 95  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |     |||||||| |||||||||||||||           
T  21353396 tgctctctcccccagactaggtcatctttagaccgaactgggtaaacaaattcttgtgttctttctctttcttccttctatctcttgctgttt------t 21353303  T
Q  96 nnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagtt--ttattggtgtggttttcacaacgaattc 193  Q
         ||||| |||||||| ||||| |||||||| ||||||| |||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  21353302 attttgtttggattatttgctacccacttgatttaattacttagtattaatttgctccacgcatcaagtttgttattggtgtggttttctcaacgaattc 21353203  T
Q  194 acaacaa 200  Q
    | |||||    
T  21353202 ataacaa 21353196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 101 - 200
Target Start/End: Original strand, 9521957 - 9522057
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  9521957 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 9522056  T
Q  200 a 200  Q
    |    
T  9522057 a 9522057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 2232724 - 2232926
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct-----------tcttccttttatctcttgctgttt 88  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |           |||  | ||||||||||| |||||    
T  2232724 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctctctctctctctctcctttatctcttgttgttt 2232823  T
Q  89 gnnnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtgg-ttttcacaa 186  Q
                ||||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||| |||    
T  2232824 ----------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacacatcaagtttttattggtgtggtttttctcaa 2232913  T
Q  187 cgaattcacaaca 199  Q
    |||||||||||||    
T  2232914 cgaattcacaaca 2232926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 9 - 200
Target Start/End: Complemental strand, 3091145 - 3090959
Alignment:
Q  9 cccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttc-tcttcttccttttatctcttgctgtttgnnnnnnnnnnngtttgaa 107  Q
    |||||||| |||||||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||||||||| | |||            |||||||    
T  3091145 cccccagagtaggtcatcattagaccgaactggataaacagattcttgtgttcttcttcttccctttatctcttgatattt------atttttgtttgaa 3091052  T
Q  108 ttat-ttgttacccgcttgatttgattacttggtattaatttgctccacgcat-caagttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    |||| |||| | ||||||||||||||| |||||| || ||||||||||| |||  || |||||||||||| |||||  |||||||||||||||||    
T  3091051 ttatattgtcatccgcttgatttgatttcttggt-tttatttgctccacacatgaaatttttattggtgt-gtttttgcaacgaattcacaacaa 3090959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 9521849 - 9521911
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttct 62  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  9521849 tgctctctcccccatactaggtcgtcattagaccgaactgggtaaacaaatatcttgtgttct 9521911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 14997176 - 14997264
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt-cttgtgttctc-ttcttccttttatctcttgctgttt 88  Q
    |||||||||||||||| ||||| |||||||||||||||| ||||||||||||  |||||||||| ||||||| ||||||| |||||||||    
T  14997176 tgctctctcccccagaataggttatcattagaccgaactaggtaaacaaattatttgtgttctctttcttcc-tttatctattgctgttt 14997264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 147 - 200
Target Start/End: Complemental strand, 25860306 - 25860251
Alignment:
Q  147 ttgctccacgcatcaagttt--tattggtgtggttttcacaacgaattcacaacaa 200  Q
    ||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||    
T  25860306 ttgctccacacatcaagtttgatattggtgtggttttcacaacgaattcacaacaa 25860251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 9314691 - 9314629
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctc 63  Q
    |||||||||||||| | |||||||||||||||| ||||||  |||||| ||||||||||||||    
T  9314691 tgctctctcccccatagtaggtcatcattagactgaactgcataaacagattcttgtgttctc 9314629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14183640 - 14183589
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||   || ||||||||||||||||||||||    
T  14183640 tgctctctcccccagactaggtcagttttggaccgaactgggtaaacaaatt 14183589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 15916623 - 15916674
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||   || ||||||||||||||||||||||    
T  15916623 tgctctctcccccagactaggtcaattttggaccgaactgggtaaacaaatt 15916674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 27916729 - 27916780
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||| ||||||||||||||    
T  27916729 tgctctctcccccagactaggtcagtattggaccgaattgggtaaacaaatt 27916780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15823778 - 15823831
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   |||||||||||||||| |||||||||||    
T  15823778 tgctctctcccccagactaggtca-atttagaccgaactgggtcaacaaattctt 15823831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 26613286 - 26613224
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttctct 64  Q
    |||||||||||||| |||||||  ||| |||||||||||||||||||||| | ||||||||||    
T  26613286 ctctctcccccagattaggtcagtatttgaccgaactgggtaaacaaattttgtgtgttctct 26613224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 27336989 - 27336911
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc--ttgtgttctcttcttccttttatctc 79  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||  |||||||||| |||||||||| ||||    
T  27336989 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattcttttgtgttctc-tcttccttttctctc 27336911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 13215318 - 13215388
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttt 73  Q
    ||||||||||||||||||||||||   || |||||||||| || ||||||||||| ||||||| |||||||||    
T  13215318 tgctctctcccccagactaggtca-atttggaccgaactgcgtcaacaaattcttttgttctc-tcttccttt 13215388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 23786071 - 23786133
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt--cttgtgttct 62  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||  ||||||||||    
T  23786071 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatttccttgtgttct 23786133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 6115151 - 6115101
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||   || ||||||||||||||||||||||    
T  6115151 tgctctctcccccagactaggtca-atttggaccgaactgggtaaacaaatt 6115101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 9314574 - 9314522
Alignment:
Q  122 cttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtg 176  Q
    |||||||||||||||| || |  ||||||||||| ||||||||||||||||||||    
T  9314574 cttgatttgattactttgttt--atttgctccacacatcaagttttattggtgtg 9314522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9459466 - 9459416
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  9459466 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 9459416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9463293 - 9463243
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  9463293 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 9463243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 158 - 199
Target Start/End: Complemental strand, 2510226 - 2510184
Alignment:
Q  158 atcaagtt-ttattggtgtggttttcacaacgaattcacaaca 199  Q
    |||||||| ||||||||||| ||||||||||||||||||||||    
T  2510226 atcaagttgttattggtgtgattttcacaacgaattcacaaca 2510184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2510374 - 2510321
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  2510374 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 2510321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6823246 - 6823299
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  6823246 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 6823299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10399877 - 10399824
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  10399877 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 10399824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13358805 - 13358858
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  13358805 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 13358858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15294883 - 15294830
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  15294883 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 15294830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16226399 - 16226448
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 51  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||    
T  16226399 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaat 16226448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17186176 - 17186123
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||| |||||||||||||||||    
T  17186176 tgctctctcccccagactaggtca-atttggaccgaattgggtaaacaaattctt 17186123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 17324685 - 17324632
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  17324685 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 17324632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28207117 - 28207064
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  28207117 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 28207064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 59
Target Start/End: Original strand, 28279508 - 28279558
Alignment:
Q  9 cccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgt 59  Q
    |||| |||||||||||  |||||| ||||||||||||||||||| ||||||    
T  28279508 cccctagactaggtcagtattagatcgaactgggtaaacaaatttttgtgt 28279558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28840911 - 28840964
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  28840911 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 28840964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31735570 - 31735517
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  31735570 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 31735517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39462751 - 39462804
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  39462751 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 39462804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 50307595 - 50307542
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  50307595 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 50307542  T

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Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 51750271 - 51750324
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  51750271 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 51750324  T

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Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 51752595 - 51752648
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  51752595 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 51752648  T

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Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 8349097 - 8349036
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaattct-tgtgttctct 64  Q
    ||||||||| |||||| ||||   ||||||||||||||||||||||||| | ||||||||||    
T  8349097 tctctccccaagactatgtcagttttagaccgaactgggtaaacaaattttgtgtgttctct 8349036  T

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Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 13127736 - 13127672
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||| ||||||||||| |  ||| |||||||| ||||||||||| ||| ||||||||||    
T  13127736 tgctctctcctccagactaggttagtattggaccgaaccgggtaaacaaatttcatgtgttctct 13127672  T

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Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13598449 - 13598402
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  13598449 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 13598402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 16561700 - 16561764
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||||  |||||||||||  ||| |||||||||| ||||||||| ||| ||||||||||    
T  16561700 tgctctctcccatagactaggtcagtattggaccgaactgtgtaaacaaatttcgtgtgttctct 16561764  T

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Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19072979 - 19072932
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  19072979 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 19072932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19120869 - 19120822
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  19120869 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 19120822  T

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Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26644943 - 26644990
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  26644943 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 26644990  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37069821 - 37069774
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  37069821 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 37069774  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 47703982 - 47704029
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  47703982 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 47704029  T

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Target: scaffold1050 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 200
Target Start/End: Complemental strand, 3118 - 2918
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctct---------tcttccttttatctcttgctgtttgn 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |         |||  ||||||| |||||||||||      
T  3118 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttctccctctctctctcttttatttcttgctgttt-- 3021  T
Q  91 nnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacga 189  Q
              ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  3020 --------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacga 2929  T
Q  190 attcacaacaa 200  Q
    |||||||||||    
T  2928 attcacaacaa 2918  T

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Target: scaffold0256 (Bit Score: 87; Significance: 2e-41; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 16459 - 16657
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat-tcttgtgttctctt---------cttccttttatctcttgctgtttgn 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||         ||||||||||| |||||||||||      
T  16459 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttttctttctctcttccttttatttcttgctgttt-- 16556  T
Q  91 nnnnnnnnnngtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacga 189  Q
              ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||  || |||    
T  16557 --------ttgtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtgatttt--catcga 16646  T

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Target: scaffold0006 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 231347 - 231445
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  231347 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagttttattggtgtggttttctcaacgaattcacaaca 231445  T

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Target: scaffold0006; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5734 - 5687
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  5734 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 5687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 80; Significance: 3e-37; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 17725 - 17824
Alignment:
Q  101 gtttgaattatttgttacccgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaaca 199  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  17725 gtttggattatttgctacccgcttgatttgattacttggtattaatttgctccacgcatcaagtttttattggtgtggttttctcaacgaattcacaaca 17824  T

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Target: scaffold0131; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 14429 - 14359
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttt 73  Q
    |||||||||||| |||||||||||   || ||||||||||||| ||||||||||||||||||| |||||||||    
T  14429 tgctctctcccctagactaggtcaat-ttggaccgaactgggtcaacaaattcttgtgttctc-tcttccttt 14359  T

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Target: scaffold0209 (Bit Score: 63; Significance: 4e-27; HSPs: 2)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 17034 - 16968
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttct 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17034 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttcttttct 16968  T

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Target: scaffold0209; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 16965 - 16884
Alignment:
Q  120 cgcttgatttgattacttggtattaatttgctccacgcatcaag-ttttattggtgtggttttcacaacgaattcacaacaa 200  Q
    |||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  16965 cgcttgatttgattacttggtattaattttttccacgcatcaagtttttattggtgtggttttctcaacgaattcacaacaa 16884  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 50257 - 50333
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctct 80  Q
    ||||||||||||||||||||||   || |||| |||||||| ||||||||||||||||||  ||||| |||| |||||    
T  50257 ctctctcccccagactaggtcaat-ttggacctaactgggtcaacaaattcttgtgttcttctcttctttttctctct 50333  T

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Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 52256 - 52332
Alignment:
Q  3 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattcttgtgttctcttcttccttttatctct 80  Q
    ||||||||||||||||||||||   || |||| |||||||| ||||||||||||||||||  ||||| |||| |||||    
T  52256 ctctctcccccagactaggtcaat-ttggaccaaactgggtcaacaaattcttgtgttcttctcttctttttctctct 52332  T

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Target: scaffold0468 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 1689 - 1625
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 64  Q
    |||||||||||||| |||||||||   || |||||||||||||||||||| ||| ||||||||||    
T  1689 tgctctctcccccatactaggtcagtttttgaccgaactgggtaaacaaatttcgtgtgttctct 1625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22356 - 22407
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  22356 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 22407  T

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Target: scaffold0140; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24631 - 24682
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| |||||||||    
T  24631 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaattc 24682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8465 - 8512
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaa 49  Q
    |||||||||||||||| |||||||| ||| ||||||||||||| |||||    
T  8465 tgctctctcccccagattaggtcat-attggaccgaactgggtcaacaa 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 282 - 332
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    ||||||||||||||||||||||||  ||| ||||||||||||| ||||||||    
T  282 tgctctctcccccagactaggtca-gattggaccgaactgggtcaacaaatt 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 1500 - 1447
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  1500 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 1447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 69339 - 69286
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattctt 55  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||||    
T  69339 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattctt 69286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29411 - 29462
Alignment:
Q  1 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaattc 53  Q
    ||||||||||||||||||||||||   || ||||||||||||| |||||||||    
T  29411 tgctctctcccccagactaggtca-atttggaccgaactgggtcaacaaattc 29462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 16694 - 16646
Alignment:
Q  4 tctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 52  Q
    |||||||||||||| ||||||   || ||||||||||||||||||||||    
T  16694 tctctcccccagaccaggtcagttttggaccgaactgggtaaacaaatt 16646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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