View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4262_low_4 (Length: 282)
Name: NF4262_low_4
Description: NF4262
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4262_low_4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 39 - 282
Target Start/End: Original strand, 10070362 - 10070605
Alignment:
| Q |
39 |
ttccatgattaaatatatcccttccaaatcaagcaaaaatctcaagatgaacatgatcaagcttgatggaactgaataagggagtagtacaacaaaagta |
138 |
Q |
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| T |
10070362 |
ttccatgattaaatatatcccttccaaatcaaccaaaaatctcaagatgaacatgatcaagcttgatggaactgaataagggagtagtacaacaaaagta |
10070461 |
T |
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| Q |
139 |
gctagcatccaccaaaatgaatgattaatataactttatatctttcagtcatgatccttgaccaaatgtgtcgtttgatatatggcccataagaaagtgg |
238 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
10070462 |
gctagcatccaccaaaatgaatgattaatataactttatatctttcagtcatgatccttgaccaaatgtgtcgtgtgatatatggcccataagaaagtgg |
10070561 |
T |
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| Q |
239 |
agaagctgttatttccttgcactcaaacctctcttgcctttgct |
282 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10070562 |
agaagctgttatttccttgcactcaaacctctcttgcctttgct |
10070605 |
T |
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