View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4263-Insertion-2 (Length: 274)
Name: NF4263-Insertion-2
Description: NF4263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4263-Insertion-2 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 156; Significance: 6e-83; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 12510671 - 12510834
Alignment:
| Q |
1 |
ctatctgcattccttcagattcagatgaaaaagtgtttaatgttgcaagatacattatggcaccgaagtaattaagtagaattattgatgtggtacccca |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12510671 |
ctatctgcattcgttcagattcagatgaaaaagtgtttaatgttgcaagagacattatggcaccgaagtaattaagtagaattattgatgtggtacccca |
12510770 |
T |
|
| Q |
101 |
aacgtacactctactagtatattagtgagttggaagtcatgtgaagtttattacaacgattttg |
164 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12510771 |
aacgtacactctactagtatattagtgagttggaagtcatgtgaagtttattacaacgattttg |
12510834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University