View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4263_low_19 (Length: 250)

Name: NF4263_low_19
Description: NF4263
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4263_low_19
NF4263_low_19
[»] chr5 (48 HSPs)
chr5 (64-242)||(5819298-5819476)
chr5 (66-242)||(2865124-2865300)
chr5 (66-242)||(18183338-18183514)
chr5 (56-242)||(19359126-19359312)
chr5 (65-242)||(8647437-8647614)
chr5 (66-242)||(8460930-8461106)
chr5 (66-242)||(24362205-24362381)
chr5 (66-242)||(15708971-15709146)
chr5 (66-242)||(29455111-29455287)
chr5 (66-238)||(14215616-14215788)
chr5 (69-242)||(15372242-15372415)
chr5 (66-242)||(164560-164736)
chr5 (69-226)||(5818932-5819090)
chr5 (66-231)||(14463901-14464065)
chr5 (66-226)||(19359520-19359681)
chr5 (69-226)||(18182973-18183131)
chr5 (66-226)||(8647822-8647983)
chr5 (64-225)||(164189-164350)
chr5 (72-226)||(24361843-24361997)
chr5 (66-226)||(8461315-8461476)
chr5 (63-226)||(2864751-2864915)
chr5 (66-228)||(25000471-25000634)
chr5 (72-226)||(24325218-24325372)
chr5 (68-242)||(24331929-24332107)
chr5 (66-242)||(16018589-16018763)
chr5 (66-226)||(24331559-24331722)
chr5 (68-226)||(14215243-14215402)
chr5 (83-242)||(25000107-25000266)
chr5 (69-228)||(16018969-16019129)
chr5 (66-226)||(29454740-29454901)
chr5 (65-208)||(7349420-7349563)
chr5 (63-226)||(15709353-15709516)
chr5 (67-186)||(4222147-4222266)
chr5 (63-225)||(15371868-15372030)
chr5 (65-206)||(4623147-4623286)
chr5 (65-192)||(7348558-7348685)
chr5 (79-205)||(4624631-4624757)
chr5 (56-204)||(4219653-4219800)
chr5 (1-65)||(6622403-6622467)
chr5 (67-205)||(6018315-6018452)
chr5 (100-204)||(6019177-6019282)
chr5 (117-208)||(13814131-13814226)
chr5 (145-192)||(14462683-14462730)
chr5 (183-242)||(24325580-24325639)
chr5 (66-228)||(41834443-41834605)
chr5 (196-242)||(16752711-16752757)
chr5 (196-242)||(19291487-19291533)
chr5 (196-240)||(28289814-28289858)
[»] chr8 (38 HSPs)
chr8 (66-242)||(19176659-19176835)
chr8 (66-242)||(12571863-12572040)
chr8 (66-239)||(41681134-41681306)
chr8 (66-242)||(44831614-44831790)
chr8 (63-242)||(13224638-13224816)
chr8 (66-242)||(9930026-9930202)
chr8 (66-242)||(31133220-31133396)
chr8 (69-242)||(33328161-33328334)
chr8 (66-233)||(11656455-11656623)
chr8 (58-242)||(9178005-9178188)
chr8 (66-226)||(13225023-13225184)
chr8 (66-226)||(19176290-19176451)
chr8 (69-226)||(9928912-9929070)
chr8 (66-226)||(33742922-33743082)
chr8 (66-226)||(44831247-44831408)
chr8 (65-226)||(41681518-41681680)
chr8 (66-226)||(11656841-11657002)
chr8 (67-225)||(31133605-31133764)
chr8 (113-232)||(33743298-33743417)
chr8 (66-224)||(34540934-34541093)
chr8 (69-242)||(4630161-4630328)
chr8 (69-226)||(12572235-12572393)
chr8 (68-226)||(33328524-33328683)
chr8 (66-220)||(4629797-4629952)
chr8 (66-174)||(11336959-11337067)
chr8 (69-204)||(10918129-10918264)
chr8 (66-207)||(8073956-8074096)
chr8 (148-207)||(43958267-43958326)
chr8 (196-242)||(7910986-7911032)
chr8 (196-242)||(9796856-9796902)
chr8 (196-242)||(28254796-28254842)
chr8 (196-242)||(35427182-35427228)
chr8 (158-226)||(9177724-9177793)
chr8 (196-241)||(18805292-18805337)
chr8 (64-116)||(7911112-7911164)
chr8 (66-106)||(10919691-10919731)
chr8 (202-242)||(16578466-16578506)
chr8 (202-242)||(35163834-35163874)
[»] chr1 (48 HSPs)
chr1 (66-242)||(50970647-50970823)
chr1 (66-242)||(5540188-5540363)
chr1 (66-242)||(18984119-18984295)
chr1 (65-242)||(29306952-29307128)
chr1 (66-242)||(29869620-29869796)
chr1 (63-243)||(33144287-33144467)
chr1 (63-242)||(8678911-8679089)
chr1 (66-233)||(15646573-15646740)
chr1 (69-242)||(5962947-5963120)
chr1 (69-242)||(15173099-15173272)
chr1 (64-242)||(21856412-21856590)
chr1 (66-242)||(9018973-9019149)
chr1 (63-242)||(17433213-17433392)
chr1 (65-242)||(29307311-29307488)
chr1 (66-240)||(26859431-26859604)
chr1 (68-242)||(39154021-39154195)
chr1 (67-226)||(5539817-5539977)
chr1 (66-230)||(9019343-9019508)
chr1 (68-228)||(17433597-17433758)
chr1 (63-226)||(29870003-29870167)
chr1 (68-226)||(21856044-21856203)
chr1 (66-224)||(50970278-50970437)
chr1 (67-226)||(8678542-8678702)
chr1 (67-225)||(4636356-4636515)
chr1 (66-226)||(15173478-15173638)
chr1 (66-226)||(18984503-18984664)
chr1 (74-226)||(33143925-33144078)
chr1 (66-226)||(39154404-39154565)
chr1 (66-206)||(52268290-52268430)
chr1 (57-183)||(26859050-26859176)
chr1 (66-226)||(15646192-15646353)
chr1 (67-226)||(5962579-5962739)
chr1 (126-240)||(4636033-4636146)
chr1 (68-182)||(52269177-52269291)
chr1 (66-152)||(2733416-2733502)
chr1 (65-226)||(17112281-17112442)
chr1 (91-173)||(47827026-47827108)
chr1 (68-141)||(47826966-47827039)
chr1 (66-146)||(50419726-50419806)
chr1 (171-242)||(9833522-9833593)
chr1 (202-233)||(17088519-17088550)
chr1 (196-242)||(21938693-21938739)
chr1 (196-242)||(34555750-34555796)
chr1 (196-242)||(37421292-37421338)
chr1 (196-242)||(37505438-37505484)
chr1 (200-242)||(44582427-44582469)
chr1 (196-240)||(8230013-8230057)
chr1 (206-242)||(17088290-17088326)
[»] chr6 (39 HSPs)
chr6 (63-242)||(10900299-10900478)
chr6 (66-243)||(20741100-20741277)
chr6 (63-242)||(11276951-11277130)
chr6 (66-242)||(18257137-18257313)
chr6 (66-242)||(15828010-15828186)
chr6 (66-242)||(28472637-28472812)
chr6 (66-242)||(29859826-29860001)
chr6 (67-242)||(31470685-31470860)
chr6 (63-240)||(1149802-1149980)
chr6 (66-240)||(12935528-12935702)
chr6 (57-226)||(2319663-2319832)
chr6 (66-242)||(11444987-11445163)
chr6 (56-226)||(12935147-12935318)
chr6 (69-242)||(10899942-10900115)
chr6 (67-242)||(18505288-18505463)
chr6 (69-242)||(2322588-2322760)
chr6 (66-242)||(23073999-23074164)
chr6 (66-226)||(11445371-11445532)
chr6 (66-226)||(22219737-22219898)
chr6 (66-226)||(23075512-23075673)
chr6 (64-229)||(4811370-4811535)
chr6 (66-226)||(31470315-31470476)
chr6 (66-242)||(11276590-11276766)
chr6 (64-183)||(18257565-18257684)
chr6 (69-226)||(18504922-18505080)
chr6 (66-226)||(20741485-20741649)
chr6 (68-208)||(29033436-29033577)
chr6 (69-202)||(3835135-3835268)
chr6 (66-207)||(18296145-18296285)
chr6 (67-219)||(15827639-15827794)
chr6 (68-208)||(29035040-29035180)
chr6 (66-154)||(1149465-1149553)
chr6 (65-192)||(4811675-4811802)
chr6 (63-122)||(22534214-22534273)
chr6 (171-241)||(35163557-35163627)
chr6 (196-242)||(25472382-25472428)
chr6 (196-242)||(28636566-28636612)
chr6 (196-242)||(31073512-31073558)
chr6 (196-242)||(31573855-31573901)
[»] chr3 (67 HSPs)
chr3 (63-242)||(39555946-39556125)
chr3 (66-242)||(31779021-31779197)
chr3 (69-242)||(5136983-5137156)
chr3 (69-242)||(41046703-41046876)
chr3 (66-240)||(20840560-20840734)
chr3 (66-242)||(24300925-24301101)
chr3 (66-242)||(37726929-37727105)
chr3 (66-242)||(23644462-23644638)
chr3 (66-233)||(43973441-43973608)
chr3 (66-221)||(48452989-48453144)
chr3 (68-242)||(25853596-25853770)
chr3 (63-240)||(32535330-32535511)
chr3 (66-242)||(26837725-26837900)
chr3 (66-242)||(30104482-30104657)
chr3 (66-242)||(27393946-27394122)
chr3 (66-226)||(43973824-43973985)
chr3 (70-242)||(22425182-22425354)
chr3 (69-242)||(26274936-26275108)
chr3 (63-226)||(37727314-37727478)
chr3 (66-242)||(17464860-17465037)
chr3 (66-226)||(27393661-27393822)
chr3 (66-226)||(20840945-20841106)
chr3 (66-226)||(39555578-39555739)
chr3 (66-228)||(29801798-29801961)
chr3 (69-207)||(25612381-25612519)
chr3 (66-226)||(4275748-4275909)
chr3 (66-226)||(31778653-31778814)
chr3 (65-226)||(25853233-25853395)
chr3 (66-226)||(17464491-17464652)
chr3 (66-226)||(23644849-23645010)
chr3 (66-226)||(30098147-30098308)
chr3 (66-226)||(5137365-5137526)
chr3 (65-208)||(50116812-50116955)
chr3 (57-226)||(22424805-22424975)
chr3 (69-226)||(32534962-32535120)
chr3 (69-226)||(26837363-26837521)
chr3 (65-187)||(29801355-29801477)
chr3 (69-226)||(26274570-26274728)
chr3 (64-205)||(23228414-23228554)
chr3 (69-226)||(24300560-24300717)
chr3 (69-226)||(41047083-41047239)
chr3 (67-206)||(32697106-32697244)
chr3 (66-207)||(51474737-51474879)
chr3 (66-207)||(37220557-37220698)
chr3 (68-210)||(25420542-25420684)
chr3 (66-204)||(45965938-45966076)
chr3 (67-180)||(51473429-51473542)
chr3 (100-194)||(18010162-18010256)
chr3 (66-142)||(37222040-37222116)
chr3 (61-242)||(55192113-55192293)
chr3 (67-207)||(25419145-25419285)
chr3 (182-242)||(29801532-29801592)
chr3 (129-208)||(23227319-23227398)
chr3 (196-242)||(49407925-49407971)
chr3 (196-242)||(37075818-37075864)
chr3 (66-242)||(55389967-55390143)
chr3 (66-242)||(27200062-27200237)
chr3 (196-242)||(32730759-32730805)
chr3 (196-242)||(47431827-47431873)
chr3 (196-242)||(50662782-50662828)
chr3 (196-242)||(51473225-51473271)
chr3 (66-119)||(52375824-52375877)
chr3 (69-141)||(22370599-22370671)
chr3 (69-193)||(32695706-32695830)
chr3 (202-242)||(34105018-34105058)
chr3 (66-142)||(49407796-49407872)
chr3 (196-240)||(51472985-51473029)
[»] chr7 (39 HSPs)
chr7 (69-242)||(19830423-19830596)
chr7 (66-242)||(19590525-19590701)
chr7 (66-242)||(37786767-37786943)
chr7 (66-242)||(38858643-38858819)
chr7 (66-240)||(2659211-2659385)
chr7 (66-240)||(34534162-34534336)
chr7 (69-242)||(29100220-29100393)
chr7 (63-240)||(32004985-32005162)
chr7 (66-240)||(35289272-35289446)
chr7 (69-242)||(4641443-4641616)
chr7 (72-242)||(23953099-23953268)
chr7 (66-226)||(19590909-19591070)
chr7 (69-242)||(4478070-4478242)
chr7 (66-226)||(2658839-2659000)
chr7 (66-226)||(38859025-38859186)
chr7 (66-226)||(34533791-34533952)
chr7 (66-225)||(32004614-32004774)
chr7 (66-224)||(37787153-37787312)
chr7 (63-225)||(35288900-35289063)
chr7 (67-207)||(28584326-28584466)
chr7 (66-208)||(38160951-38161093)
chr7 (66-226)||(19830804-19830964)
chr7 (79-226)||(29099863-29100011)
chr7 (66-226)||(23952730-23952892)
chr7 (66-204)||(28583439-28583577)
chr7 (69-226)||(4641828-4641983)
chr7 (196-242)||(26026688-26026734)
chr7 (196-242)||(48247721-48247767)
chr7 (200-233)||(32427399-32427432)
chr7 (196-242)||(9181662-9181708)
chr7 (196-242)||(24929673-24929719)
chr7 (196-242)||(26048078-26048124)
chr7 (196-242)||(28687869-28687915)
chr7 (196-242)||(35579028-35579074)
chr7 (200-242)||(35579256-35579298)
chr7 (196-242)||(48247961-48248007)
chr7 (66-130)||(39137014-39137079)
chr7 (202-242)||(11973772-11973812)
chr7 (63-119)||(27245200-27245256)
[»] scaffold0295 (2 HSPs)
scaffold0295 (66-242)||(4793-4969)
scaffold0295 (68-226)||(5179-5334)
[»] chr2 (50 HSPs)
chr2 (69-240)||(11090524-11090695)
chr2 (66-242)||(239353-239528)
chr2 (66-242)||(40027140-40027316)
chr2 (66-243)||(18451199-18451376)
chr2 (66-231)||(22374320-22374485)
chr2 (69-242)||(40815714-40815887)
chr2 (65-242)||(43058332-43058509)
chr2 (66-242)||(1978108-1978284)
chr2 (63-240)||(28616610-28616788)
chr2 (66-231)||(26538097-26538262)
chr2 (69-239)||(14432145-14432315)
chr2 (66-233)||(26538456-26538624)
chr2 (72-242)||(3025472-3025641)
chr2 (69-233)||(8425738-8425902)
chr2 (66-222)||(7446342-7446497)
chr2 (66-226)||(7446730-7446891)
chr2 (66-207)||(20444749-20444890)
chr2 (66-226)||(18450830-18450991)
chr2 (63-226)||(40815342-40815506)
chr2 (69-226)||(40027524-40027682)
chr2 (66-226)||(11090904-11091065)
chr2 (66-207)||(20440436-20440576)
chr2 (66-226)||(22374709-22374870)
chr2 (64-207)||(35779706-35779849)
chr2 (67-207)||(35781067-35781207)
chr2 (66-226)||(28616998-28617159)
chr2 (66-226)||(43058717-43058877)
chr2 (67-226)||(239736-239896)
chr2 (68-207)||(8972239-8972378)
chr2 (66-192)||(1978528-1978654)
chr2 (66-183)||(28847123-28847240)
chr2 (63-225)||(3025848-3026009)
chr2 (69-225)||(8425358-8425514)
chr2 (68-206)||(15552459-15552596)
chr2 (68-208)||(15551501-15551641)
chr2 (68-226)||(14432525-14432684)
chr2 (66-242)||(28143400-28143575)
chr2 (66-119)||(43216202-43216255)
chr2 (196-242)||(4356126-4356172)
chr2 (196-242)||(4809009-4809055)
chr2 (196-242)||(5560920-5560966)
chr2 (196-242)||(11540008-11540054)
chr2 (196-242)||(16953304-16953350)
chr2 (196-242)||(42192612-42192658)
chr2 (64-117)||(4355753-4355806)
chr2 (66-119)||(42192736-42192789)
chr2 (63-119)||(6949937-6949993)
chr2 (202-242)||(33920981-33921021)
chr2 (63-119)||(42192237-42192293)
chr2 (196-240)||(43215839-43215883)
[»] scaffold0951 (2 HSPs)
scaffold0951 (66-240)||(1667-1841)
scaffold0951 (66-226)||(2051-2212)
[»] scaffold0007 (3 HSPs)
scaffold0007 (66-248)||(64302-64484)
scaffold0007 (69-181)||(64735-64847)
scaffold0007 (68-242)||(205738-205911)
[»] scaffold0273 (2 HSPs)
scaffold0273 (66-242)||(4576-4752)
scaffold0273 (105-226)||(4242-4364)
[»] chr4 (68 HSPs)
chr4 (66-242)||(12234329-12234505)
chr4 (63-242)||(11153516-11153695)
chr4 (66-233)||(25447614-25447781)
chr4 (68-242)||(33109686-33109860)
chr4 (68-242)||(46193774-46193948)
chr4 (66-243)||(15523602-15523779)
chr4 (69-242)||(22434547-22434718)
chr4 (53-242)||(25937657-25937846)
chr4 (66-242)||(22170306-22170481)
chr4 (68-242)||(23494445-23494619)
chr4 (68-242)||(38962189-38962362)
chr4 (68-242)||(4219559-4219733)
chr4 (66-242)||(48526196-48526371)
chr4 (63-226)||(22434176-22434340)
chr4 (66-242)||(51020797-51020973)
chr4 (69-242)||(2118665-2118837)
chr4 (69-242)||(54995437-54995609)
chr4 (65-228)||(46193404-46193568)
chr4 (65-226)||(25447246-25447408)
chr4 (65-226)||(45082808-45082970)
chr4 (66-226)||(20470895-20471056)
chr4 (69-242)||(45082435-45082606)
chr4 (66-225)||(15523235-15523395)
chr4 (59-182)||(23494872-23494995)
chr4 (69-226)||(4219943-4220101)
chr4 (65-226)||(12234713-12234875)
chr4 (69-226)||(48526565-48526723)
chr4 (69-226)||(54995072-54995230)
chr4 (66-226)||(11153146-11153307)
chr4 (67-208)||(20958264-20958403)
chr4 (134-242)||(12503805-12503913)
chr4 (66-225)||(25938056-25938216)
chr4 (69-226)||(18751602-18751760)
chr4 (66-192)||(33109883-33110009)
chr4 (66-226)||(51021180-51021340)
chr4 (68-180)||(18763951-18764063)
chr4 (67-207)||(44892552-44892692)
chr4 (68-226)||(2118295-2118454)
chr4 (69-208)||(48713749-48713888)
chr4 (63-183)||(35363028-35363149)
chr4 (83-207)||(43243685-43243808)
chr4 (64-207)||(48294946-48295090)
chr4 (84-226)||(12503454-12503597)
chr4 (66-207)||(48293594-48293735)
chr4 (69-202)||(16690939-16691072)
chr4 (83-204)||(43281198-43281318)
chr4 (67-207)||(44890518-44890658)
chr4 (66-202)||(48708295-48708431)
chr4 (66-192)||(10258306-10258432)
chr4 (59-202)||(16691481-16691623)
chr4 (73-204)||(20957196-20957327)
chr4 (124-207)||(43242328-43242411)
chr4 (66-136)||(16318251-16318321)
chr4 (175-242)||(18751971-18752038)
chr4 (66-242)||(17503974-17504149)
chr4 (127-207)||(44220781-44220861)
chr4 (65-164)||(55189527-55189626)
chr4 (202-242)||(17504329-17504369)
chr4 (202-242)||(35193443-35193483)
chr4 (63-207)||(30597925-30598068)
chr4 (199-242)||(41608508-41608551)
chr4 (196-242)||(14439958-14440004)
chr4 (196-242)||(34789752-34789798)
chr4 (196-242)||(35643697-35643743)
chr4 (196-242)||(46737025-46737071)
chr4 (209-242)||(40160236-40160269)
chr4 (66-119)||(55677451-55677504)
chr4 (202-242)||(14440198-14440238)
[»] scaffold0019 (1 HSPs)
scaffold0019 (66-242)||(134042-134218)
[»] scaffold1223 (2 HSPs)
scaffold1223 (68-242)||(755-928)
scaffold1223 (63-242)||(1110-1289)
[»] scaffold0432 (2 HSPs)
scaffold0432 (69-242)||(10242-10414)
scaffold0432 (69-166)||(9935-10032)
[»] scaffold0417 (2 HSPs)
scaffold0417 (85-242)||(10640-10797)
scaffold0417 (65-226)||(11007-11169)
[»] scaffold0027 (2 HSPs)
scaffold0027 (66-242)||(42528-42703)
scaffold0027 (69-242)||(42172-42345)
[»] scaffold0176 (2 HSPs)
scaffold0176 (66-233)||(18835-19001)
scaffold0176 (63-163)||(19069-19169)
[»] scaffold0113 (1 HSPs)
scaffold0113 (70-192)||(28662-28784)
[»] scaffold1585 (1 HSPs)
scaffold1585 (67-208)||(568-709)
[»] scaffold0157 (2 HSPs)
scaffold0157 (134-242)||(16564-16672)
scaffold0157 (84-226)||(16880-17023)
[»] scaffold0057 (2 HSPs)
scaffold0057 (69-207)||(61862-62000)
scaffold0057 (66-140)||(61028-61102)
[»] scaffold0168 (1 HSPs)
scaffold0168 (115-208)||(7691-7784)
[»] scaffold0076 (1 HSPs)
scaffold0076 (69-167)||(8453-8551)
[»] scaffold1696 (1 HSPs)
scaffold1696 (70-207)||(454-589)


Alignment Details
Target: chr5 (Bit Score: 155; Significance: 2e-82; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 5819476 - 5819298
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5819476 ttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 5819377  T
Q  164 gttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||    
T  5819376 gttgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagatctaccccctatgct 5819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 2865300 - 2865124
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2865300 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 2865201  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  2865200 ttcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 2865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 18183514 - 18183338
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18183514 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18183415  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  18183414 tgcatttttcgtcctacccctcattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 18183338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 56 - 242
Target Start/End: Original strand, 19359126 - 19359312
Alignment:
Q  56 atatatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta 155  Q
    |||||| | |||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  19359126 atatatatatggcttaattacacttttggtcctcttgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaatta 19359225  T
Q  156 tcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  19359226 tcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttctagacctaccccctatgct 19359312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 8647437 - 8647614
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||    
T  8647437 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccgttttaaaacagaacaaaatggtccttcaattatcatttttg 8647536  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  8647537 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 8647614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 8460930 - 8461106
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||| ||||||| ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8460930 ggcttaattccacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 8461029  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  8461030 tgcatttttcgtcataccccccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8461106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 24362381 - 24362205
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||    
T  24362381 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaataaaacggtccttcaagtatcatttttgt 24362282  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||    
T  24362281 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacttatcccctatgct 24362205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 15708971 - 15709146
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  15708971 ggcttaattacacttttggtcctagtgttttggcctactcacgaaactggttatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 15709070  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15709071 tgcatatttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15709146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 29455287 - 29455111
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  29455287 ggcttaattacacctttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 29455188  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| | ||||||    
T  29455187 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacatacctcatatgct 29455111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 66 - 238
Target Start/End: Complemental strand, 14215788 - 14215616
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||| |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  14215788 ggcttaattacaattttggtcctcgtgttttgacctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgt 14215689  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccaccta 238  Q
    || |||||||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  14215688 tgcatttttcgtcttaacccccattttattctccaaaaacgtagagaaatgacagttttagacctacccccta 14215616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 15372415 - 15372242
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||     
T  15372415 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 15372316  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||| || ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||    
T  15372315 attttttgttctacatcccattttattttccaaaaacgcagagaaatgacagttttagacctacctcttatgct 15372242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 164736 - 164560
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| | ||||  ||||| ||||||| || |||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  164736 ggcttaattataattttgatcctcatgttttggccaactcactaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 164637  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||    
T  164636 tgcattttttgtcctaccccccattttattctccaaaaatgtagagaaatgacagttttagacctaccccctatgct 164560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 5818932 - 5819090
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  5818932 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 5819031  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |||||||||| |||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  5819032 atttttcgtcttacctcctattttcaaactccagaaacgcagagaaatgacagttttag 5819090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 231
Target Start/End: Complemental strand, 14464065 - 14463901
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  |  || |||||||||| ||||||||||| || |||||||||||||||| |    
T  14464065 ggcttaattacacttttagtcctcgtgttttggcctactcacgaaactaattttgtccttttaaaatagaacaaaacgatccttcaattatcatttttat 14463966  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 231  Q
    || |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  14463965 tgcatttttcgtcctacccca-attttattctccaaaaacgcagagaaatgacagttttagaccta 14463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 19359681 - 19359520
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19359681 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19359582  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||| ||||||||| |||||||||    
T  19359581 tggatttttcgtcctacctcctattttcaaactccagaaacgtagagaaatggcagttttag 19359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 18182973 - 18183131
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  18182973 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 18183072  T
Q  169 atttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || | |||||| | ||| |||||||||||||||||||||||||    
T  18183073 atttttcgtcctacctcctatttttataccccagaaacgcagagaaatgacagttttag 18183131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 8647983 - 8647822
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8647983 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 8647884  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||||||| ||||  | ||||| |  ||||| |||||||||||||||||||||||||    
T  8647883 tgcatttttcgtcataccttctattttcaaactccataaacgcagagaaatgacagttttag 8647822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 225
Target Start/End: Original strand, 164189 - 164350
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  164189 ttggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttataacaaaacaaaacggtcattcaattatca-tttt 164287  T
Q  164 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    |||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  164288 gttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaatttta 164350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 24361843 - 24361997
Alignment:
Q  72 attacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatt 171  Q
    ||||||||||| |||| | ||||||| ||||| |||||||||| || ||||||| ||||||||||||||| |||| ||||| |||||||||||||| |||    
T  24361843 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgttgcatt 24361942  T
Q  172 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  24361943 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24361997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 8461476 - 8461315
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||     
T  8461476 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgttcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgc 8461377  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||||||| |||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  8461376 tgcatttttcgtcatacctcctattttcaaactccagaaacgcagagaaatgacaattttag 8461315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 2864751 - 2864915
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||| ||||||||||||||| ||||| |||||||| ||||||||||||| || || ||||||||||||||| |||||||||||| |||||||||||||||    
T  2864751 tttgacttaattacacttttggtccttgtgttttggcctactcacgaaattgatcatgcccttttaaaacataacaaaacggtccttcaattatcatttt 2864850  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  2864851 tgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 2864915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 25000634 - 25000471
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| || ||||||| ||||||||||||| ||||| ||  ||||||||||||||||||| |||||||||||||||||||||||    
T  25000634 ggcttaattacacttttggtcttcatgttttggcctactcacgaaattggtcatgttcttttaaaacagaacaaaatggtcattcaattatcatttttgt 25000535  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 228  Q
    || ||||||||||| ||| || ||||| |  |||||||||||||||||||||||||||||||||    
T  25000534 tgcatttttcgtcccacctcctattttcaaactccaaaaacgcagagaaatgacagttttagac 25000471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 226
Target Start/End: Original strand, 24325218 - 24325372
Alignment:
Q  72 attacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatt 171  Q
    ||||||||||| |||| | ||||||| ||||| |||||||||| || ||||||| ||||||||||||||| |||| ||||| |||||||||||| | |||    
T  24325218 attacacttttggtccccatgttttggcctacccacgaaactgatcatgcccttgtaaaacagaacaaaatggtccttcaagtatcatttttgtcgcatt 24325317  T
Q  172 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  24325318 tttcgtcctaccccccattttattctccacaaacgcagagaaatgatagttttag 24325372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 24332107 - 24331929
Alignment:
Q  68 cttaattacacttttag-tcctcgtgttttgtcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcattttt-g 164  Q
    ||||||||||||||| | || || ||||||| | |||||||||||||| ||||||| |||| ||||||||||||||||||| | |||||||||||||| |    
T  24332107 cttaattacactttttggtcatcatgttttggcatactcacgaaactgatcctgccttttttaaaacagaacaaaacggtcctgcaattatcattttttg 24332008  T
Q  165 ttgtattttt-cgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  24332007 ttgcattttttcgtcctaccccccattctattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 24331929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 16018589 - 16018763
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| |||||||||| |||| |||||||| || || ||||||||||||| |||||||||||||| ||||||||| |||||| |    
T  16018589 ggcttaattacacttttggtcttcgtgttttggcctattcacgaaattgatcatgcccttttaaaatagaacaaaacggtccttcaattat-atttttat 16018687  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||| ||||||| ||||||||||||||||||||||   ||| |||||||||||||||||||||| ||||||||    
T  16018688 tgcattttccgtccta-cccccattttattctccaaaaatatagaaaaatgacagttttagacctaccccctatgct 16018763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 24331559 - 24331722
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc--attttt 163  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||||    
T  24331559 ggcttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatctatttttt 24331658  T
Q  164 gttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |||| ||||||| ||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  24331659 gttgcatttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 24331722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 14215243 - 14215402
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||||||||| | ||||||||||||||||  | ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  14215243 cttaattacacttttggtcctcgtgttttggcttactcacgaaactggttatacccttttaaaacagaacaaaaaggtccttcagttatcatttttgttg 14215342  T
Q  168 tatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  14215343 catttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 14215402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 83 - 242
Target Start/End: Original strand, 25000107 - 25000266
Alignment:
Q  83 agtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctac 182  Q
    |||| |||||||||| ||||||||||||  ||||| |||||| ||||||||||| |||| |||| || ||||||||||||| ||| |||||| |||||||    
T  25000107 agtcatcgtgttttggcctactcacgaatttggtcatgccctgttaaaacagaataaaatggtcctttaattatcatttttattgcattttttgtcctac 25000206  T
Q  183 cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||    
T  25000207 cccccattttattctccaaaaacgtagagaaatgacagttttagatctacctcatatgct 25000266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 228
Target Start/End: Complemental strand, 16019129 - 16018969
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||| ||||||| | ||||||||||| ||||||||| ||||||||| |||| |||| |||  |||||||||||||||||||||    
T  16019129 ttaattacacttttggtcctcatgttttggcatactcacgaaattggtcctgctcttttaaaatagaataaaatggttcttcaattatcatttttgttgt 16019030  T
Q  169 atttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttagac 228  Q
    ||||||||||||||| || | |||||  ||||| |||||||||||||||||||||||||||    
T  16019029 atttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttagac 16018969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 29454740 - 29454901
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||| ||||||| ||| | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| || ||||||||||||||     
T  29454740 ggcttaatttcacttttggtcattgtgttttggcctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttgaattatcatttttgc 29454839  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  29454840 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 29454901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 7349563 - 7349420
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| ||||||||||||||  |||||||||||| ||||||||| ||||||||||| ||||||||  || |||| ||||||||||||    
T  7349563 tggcttaattacacttttggtcctcgtgttttggtctactcacgaaattggtcctgctcttttaaaacaaaacaaaactatccttcagttatcatttttg 7349464  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    ||| | ||||| |||||||||||||||| | |||||||||||||    
T  7349463 ttgcacttttcatcctaccccccattttttcctccaaaaacgca 7349420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 15709516 - 15709353
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| ||| | |||||||| |||||||| |||||| ||| |||||||| ||||||||||||||||||| || | |||||||||     
T  15709516 tttggcttaattacacttttggtcattgtgttttggcctactcatgaaactagtcatgcccttt-aaaacagaacaaaacggtcctttagttatcatttc 15709418  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||| ||||||||||||||| || ||||| |  ||||| || ||||||||||||||||||||||    
T  15709417 tgttgcatttttcgtcctacctcctattttcaaactccataagcgcagagaaatgacagttttag 15709353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 4222266 - 4222147
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| ||||||||||||||  || ||||||||| ||||| |||||||||||||||||||||||  |||||||| ||||||||||| ||    
T  4222266 gcttaattacacttttggtcctcgtgttttgggcttctcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcattcagttatcatttttatt 4222167  T
Q  167 gtatttttcgtcctaccccc 186  Q
    | ||||||||||||||||||    
T  4222166 gcatttttcgtcctaccccc 4222147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 15371868 - 15372030
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||| |||||||||||||||  ||||||| |||||  |||||||||||  ||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  15371868 tttgacttaattacacttttgatcctcgtattttggtctactcacgaat-tggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 15371966  T
Q  163 tgttgtatttttcgtcctaccccccattt-tattctccaaaaacgcagagaaatgacagtttta 225  Q
    ||||| ||||||||||| ||| || ||||  |  ||| | |||||||||||||||| |||||||    
T  15371967 tgttgcatttttcgtcccacctcctatttgcaaactctagaaacgcagagaaatgatagtttta 15372030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 4623147 - 4623286
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| ||| |||||||||| | ||||||||||| ||||||||||  |||||||||||||||||  ||| ||||||||||||||||     
T  4623147 tggcttaattacacttttggtcatcgtgttttgacttactcacgaaattggtcctgcctctttaaaacagaacaaaattgtccttcaattatcattttta 4623246  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacg 206  Q
    | | ||||| |||||||  ||||||||||| |||||||||||    
T  4623247 tggcattttccgtccta--ccccattttatcctccaaaaacg 4623286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 192
Target Start/End: Original strand, 7348558 - 7348685
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||||| |||| |||||| ||||||   |||||||||||| ||||| ||||||||||||||||||||||||  || |||  ||||||||||||    
T  7348558 tggcttaattacatttttggtcctcatgttttagtctactcacgaaattggtcgtgcccttttaaaacagaacaaaactttccttcggttatcatttttg 7348657  T
Q  165 ttgtatttttcgtcctaccccccatttt 192  Q
    ||| | ||||||||||||||||||||||    
T  7348658 ttgcacttttcgtcctaccccccatttt 7348685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 79 - 205
Target Start/End: Complemental strand, 4624757 - 4624631
Alignment:
Q  79 ttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtc 178  Q
    |||| |||||||||||||  ||||||||||||| ||||| || |  ||||||||| ||||||||  ||||||||||||||||| ||||| ||||||||||    
T  4624757 ttttcgtcctcgtgttttaacctactcacgaaattggtcatgtctctttaaaacataacaaaactatcattcaattatcatttatgttgcatttttcgtc 4624658  T
Q  179 ctaccccccattttattctccaaaaac 205  Q
    |||||||||||||||| || |||||||    
T  4624657 ctaccccccattttatccttcaaaaac 4624631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 204
Target Start/End: Original strand, 4219653 - 4219800
Alignment:
Q  56 atatatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta 155  Q
    ||||| |||||||||||||||||||||  |||||||||||||  ||| | || ||| ||||| |||| |||||||||||||||||   ||| || | |||    
T  4219653 atataagtttggcttaattacacttttgatcctcgtgttttgggctatttacaaaaatggtcatgcctttttaaaacagaacaaagttgtcctttagtta 4219752  T
Q  156 tcatttttgttgtatttttcgtcctaccccccattttattctccaaaaa 204  Q
    |||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  4219753 tcatttttgttgcatttttcgtccta-cccccattttatcctccaaaaa 4219800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 6622467 - 6622403
Alignment:
Q  1 cgtaagttgatactctatttaattgattttctttaaacttgagttgaatgtgatcatatatgttt 65  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6622467 cgtaagttgatactctatttaattgattttctttaaacttgagttgaatgtgatcatatatgttt 6622403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 205
Target Start/End: Original strand, 6018315 - 6018452
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||||| |||| || |||||||||||| |||||||||||||||||| || ||||||||||||||||||||   || |||||||||||||||||||    
T  6018315 gcttaattacatttttggttctcgtgttttgttctactcacgaaactggtcatgtccttttaaaacagaacaaaattatc-ttcaattatcatttttgtt 6018413  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaac 205  Q
    | | |||| ||||||||| | |||||   ||||||||||    
T  6018414 gcagttttagtcctaccctctattttcacctccaaaaac 6018452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 100 - 204
Target Start/End: Complemental strand, 6019282 - 6019177
Alignment:
Q  100 ctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgta-tttttcgtcctaccccccattttattctc 198  Q
    ||||||||||||||| || ||| |||||||||||||||||||| ||| || ||||||||||||||||| | |||||||||||||| |||||||||| |||    
T  6019282 ctactcacgaaactgatcttgctcttttaaaacagaacaaaactgtcttttaattatcatttttgttgcattttttcgtcctacctcccattttatcctc 6019183  T
Q  199 caaaaa 204  Q
    ||||||    
T  6019182 caaaaa 6019177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 13814226 - 13814131
Alignment:
Q  117 cctgcccttttaaaacagaacaaaacggtcat-----tcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    |||||||||||||| ||||||||||| |||||     ||||||||||||||||||| | |||||||||||| ||||||||||| |||||||||||||    
T  13814226 cctgcccttttaaatcagaacaaaactgtcatgtctttcaattatcatttttgttgcacttttcgtcctac-ccccattttatcctccaaaaacgca 13814131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 14462683 - 14462730
Alignment:
Q  145 tcattcaattatcatttttgttgtatttttcgtcctaccccccatttt 192  Q
    ||||||||||||||||||||||| ||||||||||||||| || |||||    
T  14462683 tcattcaattatcatttttgttgcatttttcgtcctacctcctatttt 14462730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 24325639 - 24325580
Alignment:
Q  183 cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||| ||   |||||||||||||||||||||| || | ||||||||    
T  24325639 cccccattttattctccagaagtacagagaaatgacagttttagacttatcccctatgct 24325580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 41834605 - 41834443
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat-ttttg 164  Q
    ||||||||||||||||| |||||||  ||||| ||  ||||||||| ||||||||||  ||| | |  ||||||||| |||  | || |||||| ||||     
T  41834605 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcagatcgaacaaaaccgtc-ctaaactatcatgttttt 41834507  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagac 228  Q
    ||| | |||| |||||||| || |||||   |||   |||||||||||||||||||||||||||    
T  41834506 ttgcagttttagtcctacctcctattttcaactcttgaaacgcagagaaatgacagttttagac 41834443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 16752711 - 16752757
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| |||||||| ||||||||||||||| ||||||||    
T  16752711 ctccataaacgcaaagaaatgatagttttagacctaccccctatgct 16752757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 19291487 - 19291533
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  19291487 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 19291533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 28289814 - 28289858
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||    
T  28289814 ctccagaaacgcacagaaatgacagttttagtccaaccacctatg 28289858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 153; Significance: 3e-81; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 19176835 - 19176659
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19176835 ggcttaattacacttttggtcctcgtgttttggcctactcacgtaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19176736  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19176735 tgcatttttcgtcctaccccccattttattctccaaaaacgcagacaaatgacagttttagacctaccacctatgct 19176659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 12571863 - 12572040
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  12571863 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 12571962  T
Q  166 tgtatttttcgtcct-accccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12571963 tgcatttttcgtcctaaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 12572040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 239
Target Start/End: Original strand, 41681134 - 41681306
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41681134 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 41681233  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctat 239  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| |||||    
T  41681234 tgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttaaacataccccctat 41681306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 44831790 - 44831614
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  44831790 ggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggttattcaattatcatttttgt 44831691  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  44831690 tgcatttttggtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 44831614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 13224638 - 13224816
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||| ||||||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||||||||    
T  13224638 tttggcataattacacttttggtcttcgtgttttggcctactcacgaaactggtc-tgcccttttaaaacagaacaaaacaatccttcaattatcatttt 13224736  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13224737 tgttgaatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 13224816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 9930202 - 9930026
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||    
T  9930202 ggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaactatcatttttgt 9930103  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||    
T  9930102 tgcatttttcgtcctaccccccattttattctccaaaagcgcagagaaatgatagttttagacctaccccctatgct 9930026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 31133220 - 31133396
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| ||| ||||| ||||||||||||    
T  31133220 ggcttaattacacttttggtcctcgtgttttgccctactcacgaaactggtcccgcccttttaaaacaaaacaaaacagtccttcaagtatcatttttgt 31133319  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||    
T  31133320 tgcatttttcgtcctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctacctcttatgct 31133396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 33328161 - 33328334
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| ||||| ||||||||||||||     
T  33328161 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaagtatcatttttgttgc 33328260  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  33328261 atttttcgtcctaccctcgattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgct 33328334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 11656455 - 11656623
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||    
T  11656455 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaactgaacaaaacggtccttcaattaccatttttgt 11656554  T
Q  166 tgtatttttcgtcctaccccccattttattctcc-aaaaacgcagagaaatgacagttttagacctacc 233  Q
    || ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  11656555 tgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatggcagttttagacctacc 11656623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 58 - 242
Target Start/End: Complemental strand, 9178188 - 9178005
Alignment:
Q  58 atatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc 157  Q
    |||| |||||||||||||||||||| |||||||||||||| |||||||||||||||| || |||||| ||||||||||||||||||||| ||||| ||||    
T  9178188 atatttttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgccctcttaaaacagaacaaaacggtccttcaagtatc 9178089  T
Q  158 atttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||| ||||||| || || |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  9178088 atttttgttgcatttttcatctta-cccccattttattctcaaaaaacgcagagaaatgacaattttagacctacctcctatgct 9178005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 13225184 - 13225023
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  13225184 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 13225085  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  13225084 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 13225023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 19176290 - 19176451
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19176290 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19176389  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  19176390 tgcatttttcgtccgacctcctattttcaaactccagaaacgcagagaaatgacaattttag 19176451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 9928912 - 9929070
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  9928912 ttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 9929011  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| ||  |||| |  ||||| ||||||||||||||| |||||||||    
T  9929012 atttttcgtcctacctccttttttcaaactccagaaacgcagagaaatgtcagttttag 9929070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 33742922 - 33743082
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||     
T  33742922 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaactggtcttgcccttttaaaacagaac-aaacggtctttcaattatcatttttga 33743020  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| || | ||| |||||||||||||||||||||||||    
T  33743021 tgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 33743082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 44831247 - 44831408
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  44831247 ggcttaattacacttttggtcctcatgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgt 44831346  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  44831347 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgatagttttag 44831408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 41681680 - 41681518
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  41681680 tggcttaattacacttttggtcctcgtgttttggcctaatcacgaaactggtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttg 41681581  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| |||||||||||||||  | ||||| |  ||||| |||||||||||||||  ||||||||    
T  41681580 ttgcatttttcgtcctacctgctattttcaaactccagaaacgcagagaaatggtagttttag 41681518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 11657002 - 11656841
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| | |||||||||||||||||||| |||| ||||||||||||||||||    
T  11657002 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcccggccttttaaaacagaacaaaatggtccttcaattatcatttttgt 11656903  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  11656902 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatagcagttttag 11656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 67 - 225
Target Start/End: Complemental strand, 31133764 - 31133605
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  31133764 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattattatttttgtt 31133665  T
Q  167 gtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    | |||||||||| |||| || ||||| |  ||||| ||| ||||||||||||| ||||||    
T  31133664 gcatttttcgtcatacctcctattttcaaactccagaaatgcagagaaatgacggtttta 31133605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 113 - 232
Target Start/End: Complemental strand, 33743417 - 33743298
Alignment:
Q  113 tggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagaga 212  Q
    |||| ||||| ||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33743417 tggttctgcctttttaaaacagaacaaaacggtttttcaattatcatttttgttgcatttttcgtcctaccccccattttattctccaaaaacgcagaga 33743318  T
Q  213 aatgacagttttagacctac 232  Q
    ||| ||||||||||||||||    
T  33743317 aataacagttttagacctac 33743298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 34541093 - 34540934
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||    
T  34541093 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgt 34540994  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 224  Q
    || ||||||||||||||| || ||||| |  ||  | |||||||||||||||| ||||||    
T  34540993 tgcatttttcgtcctacctcctattttcaaacttaagaaacgcagagaaatgatagtttt 34540934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 4630328 - 4630161
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||||||||  || ||||||||||  |||||||||||| |||||||||  ||||||||||||| | ||||||| |||||||||      |||||     
T  4630328 ttaattacacttttgatcatcgtgttttgggctactcacgaaattggtcctgcatttttaaaacagaatacaacggtccttcaattat------tgttgc 4630235  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  4630234 atttttcatcctaccccccattttattctccaaaaacgcagaaaaatgacagttttagacctaccccctatgct 4630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 12572393 - 12572235
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||||||||||||||  |||||||||||||| ||| ||| |||||||||||||||||||||||| ||||||||||||||||||||     
T  12572393 ttaattacacttttggtcctcgtgttttggtctactcacgaaactagtcatgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 12572294  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  12572293 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaattgcagttttag 12572235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 33328683 - 33328524
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||| |||||| |||||||||||||  ||||||||||||||| ||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  33328683 cttaattagacttttggtcctcgtgttttagcctactcacgaaactagtcatgctcttttaaaacataacaaaacggtccttcaattatcatttttgttg 33328584  T
Q  168 tatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     ||||||||||| ||| |||||||| |  ||||| ||||||||||||||| |||||||||    
T  33328583 catttttcgtcccacctcccattttcaaactccagaaacgcagagaaatggcagttttag 33328524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 66 - 220
Target Start/End: Original strand, 4629797 - 4629952
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||| |||||||| | ||||||||||| | || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  4629797 ggcttaattgcacttttaattctcgtgttttggcatattcacgaaactggtcctgcccttttaaaatagaacaaaacggtcattcaattatcatttttat 4629896  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacag 220  Q
    || |||||||||| |||| || ||||| |  ||||| ||||||| |||||||||||    
T  4629897 tgcatttttcgtcttacctcctattttcaaactccagaaacgcaaagaaatgacag 4629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 66 - 174
Target Start/End: Complemental strand, 11337067 - 11336959
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| |||||||||| | ||||||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||    
T  11337067 ggcttaattacacttttggtcttcgtgttttggcttactcacgaaattggtcccgcccttttaaaacagaataaaacggtctttcaattatcatttttgt 11336968  T
Q  166 tgtattttt 174  Q
    || ||||||    
T  11336967 tgcattttt 11336959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 69 - 204
Target Start/End: Original strand, 10918129 - 10918264
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||| |||| ||||||||||||||  |||||||||||| ||||| ||||   |||||||||| |||||  ||| ||||| ||||||||||||||     
T  10918129 ttaattacattttttgtcctcgtgttttgatctactcacgaaattggtcttgcctccttaaaacagagcaaaattgtccttcaaatatcatttttgttgc 10918228  T
Q  169 atttttcgtcctaccccccattttattctccaaaaa 204  Q
    ||||||| || ||||||||||||||| |||||||||    
T  10918229 atttttcatcataccccccattttatcctccaaaaa 10918264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 8074096 - 8073956
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||| ||| |||||| |||||||||||||| |||| |||||||| || || || ||||||||||||||||||||   || ||||||||||| ||||||    
T  8074096 ggcttagttatacttttggtcctcgtgttttggcctattcacgaaaatgatcatgtccttttaaaacagaacaaaatcatccttcaattatca-ttttgt 8073998  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    || ||||| ||||  | |||||||||||  ||||||||||||    
T  8073997 tgcattttacgtcaaaacccccattttaccctccaaaaacgc 8073956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 207
Target Start/End: Original strand, 43958267 - 43958326
Alignment:
Q  148 ttcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||    
T  43958267 ttcaattatcatttttgttgcatttttcgtcctaccctctattttattctccaaaaacgc 43958326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 7911032 - 7910986
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  7911032 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 7910986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 9796856 - 9796902
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  9796856 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 9796902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 28254842 - 28254796
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  28254842 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 35427228 - 35427182
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  35427228 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 35427182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 9177724 - 9177793
Alignment:
Q  158 atttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |||||||||| ||||||| ||| ||| |||||||| |  ||||| ||||| |||||||||||||||||||    
T  9177724 atttttgttgcatttttcatcccacctcccattttcaaactccagaaacgaagagaaatgacagttttag 9177793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 196 - 241
Target Start/End: Original strand, 18805292 - 18805337
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgc 241  Q
    ||||| |||| |||||||||||||||||||||| |||| |||||||    
T  18805292 ctccagaaacacagagaaatgacagttttagacttaccccctatgc 18805337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 7911164 - 7911112
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggt 116  Q
    |||||||||||||||||||| ||||||  ||||| || |||||||||| ||||    
T  7911164 ttggcttaattacacttttaatcctcgcattttgaccaactcacgaaaatggt 7911112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 106
Target Start/End: Complemental strand, 10919731 - 10919691
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactca 106  Q
    |||||||||| |||||| |||||||||||||| ||||||||    
T  10919731 ggcttaattatacttttggtcctcgtgttttgacctactca 10919691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 16578506 - 16578466
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  16578506 aaacgcacagaaatgacagttttagtccaaccacctatgct 16578466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 35163834 - 35163874
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  35163834 aaacgcacagaaatgacagttttagtccaaccacctatgct 35163874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 50970823 - 50970647
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50970823 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 50970724  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50970723 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 50970647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 5540363 - 5540188
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||    
T  5540363 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgtccttttaaaacagaagaaaacggtccttcaattatcatttttgt 5540264  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5540263 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc-cctatgct 5540188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 18984119 - 18984295
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18984119 ggcttaattacacttttggtcctcgtgttttggtctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18984218  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  18984219 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatgct 18984295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 29306952 - 29307128
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||    
T  29306952 tggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaacggtccttcaattatcatttttg 29307051  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29307052 ttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc-cctatgct 29307128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 29869620 - 29869796
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29869620 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattattatttttgt 29869719  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29869720 tgcatttttcgtcctacaccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29869796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 63 - 243
Target Start/End: Complemental strand, 33144467 - 33144287
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||| |||||||||    
T  33144467 tttgacttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggaccttcaaatatcatttt 33144368  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgctt 243  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  33144367 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgctt 33144287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 8679089 - 8678911
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8679089 tttggcttaattacacttttggtcctcgtgttttggcctactcacggaactggtcctgcccttttaaaacagaacaaaaaggtcattcaattatcatttt 8678990  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  8678989 tgttgcatttttcgtccta-cctccattttattctccaaaaatgcagagaaatgacagttttagacctaccccctatgct 8678911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 15646740 - 15646573
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  15646740 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgt 15646641  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15646640 tgcatttttcgtcctacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacc 15646573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 5963120 - 5962947
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||||| |||||||||| ||| ||||||||||||||||||||     
T  5963120 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacagtctttcaattatcatttttgttgc 5963021  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5963020 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 15173099 - 15173272
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||  ||||||||||||  ||||||||||||||||||||     
T  15173099 ttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaattgaacaaaacggttcttcaattatcatttttgttgc 15173198  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15173199 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 15173272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 242
Target Start/End: Complemental strand, 21856590 - 21856412
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    ||||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  21856590 ttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactgatcctgcctttttaaaacagaacaaaacggtccttcaagtatcattttt 21856491  T
Q  164 gttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    | || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21856490 gctgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 21856412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 9018973 - 9019149
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9018973 ggcttaattacacttttggtcctcgtgttttggcctactaacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaactatcatttttgt 9019072  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||| ||||||||    
T  9019073 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaattatatttttagatctaccccctatgct 9019149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 63 - 242
Target Start/End: Original strand, 17433213 - 17433392
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||| ||||||| |||||||| |||||||  | |||||||||||||||||||||||||||| ||||| |||||||||    
T  17433213 tttggcttaattacacttttggtcctcatgttttggcctactcatgaaactgaccatgcccttttaaaacagaacaaaacggtccttcaagtatcatttt 17433312  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  17433313 tgttgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 17433392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 65 - 242
Target Start/End: Complemental strand, 29307488 - 29307311
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29307488 tggcttaattgcacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 29307389  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  29307388 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacc-cctatgct 29307311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 26859604 - 26859431
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  |||||||||||||  ||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  26859604 ggcttaattacacttttgatcctcgtgttttgggctactcacgaaactaatcctgcccttttaaaacagaacaatacggtccttcaattatcatttttgt 26859505  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    || |||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||| ||||||    
T  26859504 tgcatttttcgtcctacccccca-tttattctccaaaaacgcagagaaataatagttttagacctacctcctatg 26859431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 39154021 - 39154195
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| ||| || ||||||| | |||||||||||||| || |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  39154021 cttaattacacttttggtcatcatgttttggcatactcacgaaactgatcatgcccttttaaaacagaacaaaacggtcctgcaattatcatttttgttg 39154120  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | | ||||||||    
T  39154121 catttttcgtcctaccccccattctattctccaaaaacgcatagaaatgacagttttagacccatcccctatgct 39154195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 5539817 - 5539977
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  5539817 gcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 5539916  T
Q  167 gtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||||| || ||||| |  ||||| ||||||| ||||||| |||||||||    
T  5539917 gtatttttcgtcctacctcctattttcaaactccataaacgcatagaaatggcagttttag 5539977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 230
Target Start/End: Complemental strand, 9019508 - 9019343
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9019508 ggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggttctgccattttaaaacagaacaaaacggtcattcaattatcatttttgt 9019409  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacct 230  Q
    || ||||||||||||||| || ||||| |  | ||| |||||||||||||| ||||||||||||||    
T  9019408 tgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaataacagttttagacct 9019343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 68 - 228
Target Start/End: Complemental strand, 17433758 - 17433597
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17433758 cttaattacacttttggtcctcgtgttctggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 17433659  T
Q  168 tatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 228  Q
     ||||||||||||||| || ||||| |  || || |||||||||||||||||||||||||||    
T  17433658 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacagttttagac 17433597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 29870167 - 29870003
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  29870167 tttggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttt 29870068  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||| ||||||||||||||| || ||||| |  ||  | |||||||||||||||||||||||||    
T  29870067 tgttgcatttttcgtcctacctcctattttcaaactttagaaacgcagagaaatgacagttttag 29870003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 21856044 - 21856203
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21856044 cttaattacacttttggtcctcgtgttttgatctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 21856143  T
Q  168 tatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     ||||||| ||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  21856144 catttttcatcctagctcctattttcaaactccagaaacgcagagaaatgacagttttag 21856203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 50970278 - 50970437
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||||||    
T  50970278 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggtccttcaattatcatttttgt 50970377  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 224  Q
    || |||||||||||||||  | ||||| |  ||||| |||||||||||||||||||||||    
T  50970378 tgcatttttcgtcctaccttctattttcaaactccagaaacgcagagaaatgacagtttt 50970437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 8678542 - 8678702
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  8678542 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgtt 8678641  T
Q  167 gtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    | |||||||||||||||  | ||||| |  || || ||||||| |||||||||||||||||    
T  8678642 gcatttttcgtcctacctgctattttcaaacttcagaaacgcaaagaaatgacagttttag 8678702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 67 - 225
Target Start/End: Complemental strand, 4636515 - 4636356
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||    
T  4636515 gcttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgtt 4636416  T
Q  167 gtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    | ||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| |||||    
T  4636415 gcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaatttta 4636356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 15173638 - 15173478
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  15173638 ggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgcc-ttttaaaacagaacaaaatggtccttcaattatcatttttgt 15173540  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  15173539 tgcatttttcgtcctacctcctattttcaaactctataaacgcagagaaatgacagttttag 15173478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 18984664 - 18984503
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18984664 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18984565  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||| | |||| |||||||||| |||||||||    
T  18984564 tgcatttttcgtcctacctcctattttcaaactctagaaacacagagaaatggcagttttag 18984503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 33143925 - 33144078
Alignment:
Q  74 tacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttt 173  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| || ||    
T  33143925 tacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttttgcatatt 33144024  T
Q  174 tcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  33144025 tcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 33144078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 39154565 - 39154404
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||    
T  39154565 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacataacaaaatggtccttcaattatcatttttgt 39154466  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  || || |||||||||||||||||| ||||||    
T  39154465 tgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagaaatgacaattttag 39154404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 52268290 - 52268430
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  52268290 ggcttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtcattcagttatcatttttgt 52268389  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacg 206  Q
    || | |||||||||||||||||||||| | |||||||||||    
T  52268390 tgcacttttcgtcctaccccccattttttcctccaaaaacg 52268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 26859050 - 26859176
Alignment:
Q  57 tatatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 156  Q
    ||||| |||||||||||||||||||| ||||| |||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  26859050 tatatttttggcttaattacacttttggtccttgtgttttggcctactaacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattat 26859149  T
Q  157 catttttgttgtatttttcgtcctacc 183  Q
    ||||||||||| |||||||||||||||    
T  26859150 catttttgttgcatttttcgtcctacc 26859176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 15646192 - 15646353
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| |||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||||||||    
T  15646192 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaatggtacttcaattatcatttttgt 15646291  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| |  ||||| |  ||||| ||| |||||||||||||||||||||    
T  15646292 tgcatttttcgtcctacctcatattttcaaactccataaatgcagagaaatgacagttttag 15646353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 5962579 - 5962739
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||||| |||| ||||||||||| ||  ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||    
T  5962579 gcttaattacatttttggtcctcgtgttatggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtctttcaactatcatttttgtt 5962678  T
Q  167 gtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    | ||||||||| ||||| || ||||| |  ||||| |||| ||||| ||||||||||||||    
T  5962679 gcatttttcgttctacctcctattttcaaactccagaaacacagagtaatgacagttttag 5962739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 240
Target Start/End: Original strand, 4636033 - 4636146
Alignment:
Q  126 ttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtttta 225  Q
    ||||||||||||||| ||||| ||||| |||||||||||||| |||||| || ||||||||||||||||||| |||||||||||||||||||||||||||    
T  4636033 ttaaaacagaacaaa-cggtccttcaagtatcatttttgttgcattttttgttctaccccccattttattcttcaaaaacgcagagaaatgacagtttta 4636131  T
Q  226 gacctaccacctatg 240  Q
    |||||||| ||||||    
T  4636132 gacctaccccctatg 4636146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 52269291 - 52269177
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  |||||||| |||||||||||||||    
T  52269291 cttaattacacttttggtcctcgtgttttgacttactcatgaaatcggttctgcccttttaaaacagaacaaaaatgtcattcagttatcatttttgttg 52269192  T
Q  168 tatttttcgtcctac 182  Q
     | ||||||||||||    
T  52269191 cacttttcgtcctac 52269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 152
Target Start/End: Complemental strand, 2733502 - 2733416
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaa 152  Q
    |||||||||| |||||| ||||| |||||||| |||| || ||||| |||||||||||||||||||||||||||||||||| |||||    
T  2733502 ggcttaattatacttttggtccttgtgttttggcctattcgcgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaa 2733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 17112281 - 17112442
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| || ||| |||||||  ||||||| |||| ||||   |||||||||||| |||| ||||  ||| ||||||||||||||||     
T  17112281 tggcttaattacacttttggttctcatgttttgatctactcatgaaattggtag-gcccttttaaaatagaataaaatagtccttcaattatcattttta 17112379  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||||||||| |||||| ||||||||    
T  17112380 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgatagttttag 17112442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 47827108 - 47827026
Alignment:
Q  91 tgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttt 173  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||||||||||  ||| || |||||||||||||||| ||||||    
T  47827108 tgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgtcctttaattatcatttttgttatatttt 47827026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 47826966 - 47827039
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 141  Q
    ||||||||||||||| ||||||||||||||  |||||||||||| ||||| ||||||||||||| | |||||||    
T  47826966 cttaattacacttttggtcctcgtgttttggtctactcacgaaaatggtcatgcccttttaaaatataacaaaa 47827039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 50419806 - 50419726
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtc 146  Q
    ||||||||| ||||||| ||| |||  ||| | || |||||||||| |||||||||| ||||||||  |||||||||||||    
T  50419806 ggcttaattgcacttttggtcatcgcatttagaccaactcacgaaattggtcctgcctttttaaaattgaacaaaacggtc 50419726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 9833593 - 9833522
Alignment:
Q  171 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||| ||||||||||| |||||   ||||| ||||||| |||||| ||| |||||| |||||||||||||||    
T  9833593 ttttagtcctaccccctattttcaactccagaaacgcacagaaataacatttttagtcctaccacctatgct 9833522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 233
Target Start/End: Complemental strand, 17088550 - 17088519
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctacc 233  Q
    ||||||||||||||||||||||||||||||||    
T  17088550 aaacgcagagaaatgacagttttagacctacc 17088519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 21938693 - 21938739
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  21938693 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 21938739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 34555796 - 34555750
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  34555796 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 34555750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 37421292 - 37421338
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  37421292 ctccaaaaacgcacagaaatgacagttttagtctaaccacctatgct 37421338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 37505484 - 37505438
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| | ||||||||||||||| || ||||||||||||    
T  37505484 ctccaaaaacgcacaaaaatgacagttttagtccaaccacctatgct 37505438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 44582469 - 44582427
Alignment:
Q  200 aaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||| ||||||||||||||||| || ||||||||||||    
T  44582469 aaaaacgcacagaaatgacagttttagtccaaccacctatgct 44582427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 8230057 - 8230013
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||    
T  8230057 ctccagaaacgcacagaaatgacagttttagtccaaccacctatg 8230013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 242
Target Start/End: Original strand, 17088290 - 17088326
Alignment:
Q  206 gcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  17088290 gcagagaaatggcagttttagacctacctcctatgct 17088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 152; Significance: 1e-80; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 10900478 - 10900299
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  10900478 tttggcttaattacacttttggtcctcgtattttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttt 10900379  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10900378 tgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 10900299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 66 - 243
Target Start/End: Original strand, 20741100 - 20741277
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||    
T  20741100 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaaatatcatttttgt 20741199  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgctt 243  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  20741200 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgctt 20741277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 11277130 - 11276951
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||    
T  11277130 tttggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggttcttcaattatcatttt 11277031  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  11277030 tgttgcatttttcgtcctaccccccattttattctccaaaaacgaagagaaatgacagttttagacctaccccctatgct 11276951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 18257137 - 18257313
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18257137 ggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 18257236  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  18257237 tgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 18257313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 15828186 - 15828010
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| | ||||||||||||| |||||||||||| ||||||||||||||||||    
T  15828186 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatacccttttaaaacaaaacaaaacggtccttcaattatcatttttgt 15828087  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  15828086 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 15828010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 28472637 - 28472812
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| || |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  28472637 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgt 28472736  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28472737 tgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 28472812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 29859826 - 29860001
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| || |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  29859826 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaagtggtcctgccattttaaaacagaacaaaatggtcattcaattatcatttttgt 29859925  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  29859926 tgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 29860001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 67 - 242
Target Start/End: Complemental strand, 31470860 - 31470685
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| ||||| |||||||  |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31470860 gcttaattacacttttggtccttgtgttttagcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgtt 31470761  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||    
T  31470760 gcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacaattttagatctaccccttatgct 31470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 63 - 240
Target Start/End: Complemental strand, 1149980 - 1149802
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||  |||||||| |||||||||| ||||||||||||| |||||||||||||| |||||||| ||||||    
T  1149980 tttggcttaattacacttttggtcctcgtgttttagcctactcatgaaactggtcatgcccttttaaaatagaacaaaacggtccttcaattaccatttt 1149881  T
Q  163 tgttgtatttttcgtcctaccccccattttattctcca-aaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  1149880 tgttgcatttttcgtcctaccccccattttattctccaaaaaacgcagagaaatgacagttttagacctaccccctatg 1149802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 12935702 - 12935528
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||    
T  12935702 ggcttaattacacttttggtcctcgtgttttggcgtactcacgaaactggtcctgcctttataaaacagaacaaaacggtccttcaattatcatttttgt 12935603  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    |  |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||    
T  12935602 tacatttttcgtcctaccccccattttattctccataaacacagagaaatgacagttttagacctaccccctatg 12935528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 2319663 - 2319832
Alignment:
Q  57 tatatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 156  Q
    ||||| || |||||||||||| |||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  2319663 tatatattaggcttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattat 2319762  T
Q  157 catttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  2319763 catttttgttgcatttttcgtcctaccccccattttattctccagaaacgcagagaaatgatagttttag 2319832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 11444987 - 11445163
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||| |||||||||||| |||| |||| ||||||||||||||||||    
T  11444987 ggcttaattacacttttggtcctcgtgttttggcctactcacgaagctggtcctgcccctttaaaacagaataaaatggtccttcaattatcatttttgt 11445086  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  11445087 tgcatttttcgtcctaccctccattttattctctaaaaacacagagaaatgacagttttagacctaccccctatgct 11445163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 56 - 226
Target Start/End: Original strand, 12935147 - 12935318
Alignment:
Q  56 atatatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatta 155  Q
    ||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12935147 atatatgttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaatta 12935246  T
Q  156 tcatttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |||||||||||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  12935247 tcatttttgttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacagttttag 12935318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 10899942 - 10900115
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  10899942 ttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10900041  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  10900042 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagacctacc-cctatgct 10900115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 67 - 242
Target Start/End: Complemental strand, 18505463 - 18505288
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||| |||||| ||||||||||||||  ||||||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||||    
T  18505463 gcttaattatacttttggtcctcgtgttttggtctactcacgaaactgatcctgcccttttaaaacataacaaaacagtccttcaattatcatttttgtt 18505364  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    | ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| | ||| | ||||||||    
T  18505363 gcatttttcgtcctaccccccattttattctccaacaacgaagagaaatgacagttttaaatctaacccctatgct 18505288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 2322760 - 2322588
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||| ||||||||||  |||||||||||||| ||| |||| ||||||||||||||||||||||| ||||||||||||||||||||     
T  2322760 ttaattacacttttggtcttcgtgttttggtctactcacgaaactagtcttgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 2322661  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||| || ||||||||    
T  2322660 atttttcgtcctacccctcattttattctcc-aaaacacagagaaatgacagttttagaccttccccctatgct 2322588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 23073999 - 23074164
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||            
T  23073999 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaacggtccttcaattatc-------- 23074090  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
       ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||    
T  23074091 ---atttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccttctatgct 23074164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 11445532 - 11445371
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  11445532 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 11445433  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  11445432 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 11445371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 22219898 - 22219737
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  22219898 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22219799  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||| ||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  22219798 tgcatttttcgttctacctcctattttcaaactccagaaactcagagaaatgacagttttag 22219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 23075673 - 23075512
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  23075673 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 23075574  T
Q  166 tgtatttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||| ||||| || | |||||  ||||||||| |||||||||||||||||||||    
T  23075573 tgcatttttcgttctacctcctatttttaaactccaaaaatgcagagaaatgacagttttag 23075512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 64 - 229
Target Start/End: Original strand, 4811370 - 4811535
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    ||||||||||||||||||| ||||  || |||||  |||||||||||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||||    
T  4811370 ttggcttaattacacttttggtcccagtattttggtctactcacgaaactggtcatgcccttttaaaatagaataaaacggtccttcaattatcattttt 4811469  T
Q  164 gttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacc 229  Q
    |||  |||||||||| |||||||||||||||||| |||||||||||| |||| |||||||||||||    
T  4811470 gtttcatttttcgtcttaccccccattttattcttcaaaaacgcagataaataacagttttagacc 4811535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 31470315 - 31470476
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||| ||||||||    
T  31470315 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacagtcattcaattattatttttgt 31470414  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  31470415 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 31470476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 11276590 - 11276766
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||| |||||||| |||||||||  ||||||| ||||||| |||| ||||||||||||||||||||| |||| ||||||| ||||||||||    
T  11276590 ggcttaattacacgtttagtccgcgtgttttggtctactcatgaaactgatcctacccttttaaaacagaacaaaatggtccttcaattgtcatttttgt 11276689  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |  ||||||||||||||| || ||||| |  ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  11276690 ttcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttaggcctacc-cctatgct 11276766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 64 - 183
Target Start/End: Complemental strand, 18257684 - 18257565
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    |||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  18257684 ttggcttaattatacttttggtcctcgtgttttgacctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttt 18257585  T
Q  164 gttgtatttttcgtcctacc 183  Q
    |||  |||||||||||||||    
T  18257584 gttacatttttcgtcctacc 18257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 18504922 - 18505080
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||||||||      
T  18504922 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggttcttcaattatcatttttgtttc 18505021  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||| | ||| | |||||||||||||||||||    
T  18505022 atttttcgtcctacctcctattttcaaactctagaaatgtagagaaatgacagttttag 18505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 20741649 - 20741485
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcat---ttt 162  Q
    |||||||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||   |||    
T  20741649 ggcttaattacactcttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcattttttt 20741550  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    | ||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  20741549 ttttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacaattttag 20741485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 29033436 - 29033577
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  29033436 cttaattacacttttggtcctcgtattttggcctgctcacgaaattggtcctgcccttttaaaacagaacaaaactgtccttcagttatcatttttgttg 29033535  T
Q  168 tatttttcgtcctaccccccattttatt-ctccaaaaacgca 208  Q
     |  |||| |||||||||||||||| || |||||||||||||    
T  29033536 cacatttcatcctaccccccatttttttcctccaaaaacgca 29033577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 202
Target Start/End: Complemental strand, 3835268 - 3835135
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||||  |||||||| ||||||||||||| ||||||||||  |||||||||||||||||  ||| || ||||||||||||||| |     
T  3835268 ttaattacacttttggtccatgtgttttgacctactcacgaaaatggtcctgcctctttaaaacagaacaaaattgtcctttaattatcatttttgtggc 3835169  T
Q  169 atttttcgtcctaccccccattttattctccaaa 202  Q
    |||||||||||||||||||||||||| |||||||    
T  3835168 atttttcgtcctaccccccattttatcctccaaa 3835135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 18296145 - 18296285
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| | ||||||||||||||||||| | ||||||| ||| || |  |||||||||||||||||||||||| ||| |||| |||||||||||||    
T  18296145 ggcttaattataattttagtcctcgtgttttgacttactcacaaaattgatattgcccttttaaaacagaacaaaaccgtccttcatttatcatttttgt 18296244  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    || ||||||||||||| |||||||||||| ||||||||||||    
T  18296245 tgcatttttcgtccta-cccccattttatcctccaaaaacgc 18296285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 67 - 219
Target Start/End: Original strand, 15827639 - 15827794
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaa--acggtcattcaattatcatttttg 164  Q
    |||||||||||||||| |||||||||||||| | |||||||||||||||| ||| |||||||||||| ||||||  |||||| ||||| |||||||||||    
T  15827639 gcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgtccttttaaaacataacaaattacggtccttcaactatcatttttg 15827738  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgaca 219  Q
    ||| ||||||||||||||| || ||||| |  ||||| ||||||||| ||||||||    
T  15827739 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagaaaaatgaca 15827794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 208
Target Start/End: Complemental strand, 29035180 - 29035040
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||||||||  ||||||||||||| ||||  |||||||||||||||||||||||  ||| || | |||||||||||||||    
T  29035180 cttaattacacttttcgtcctcgtgttttagcctactcacgaaattggttatgcccttttaaaacagaacaaaattgtcctttagttatcatttttgttg 29035081  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
     ||||||||||| |||| ||||||| | |||||||||||||    
T  29035080 catttttcgtcccaccctccattttttcctccaaaaacgca 29035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 66 - 154
Target Start/End: Original strand, 1149465 - 1149553
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaatt 154  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  1149465 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaatt 1149553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 65 - 192
Target Start/End: Complemental strand, 4811802 - 4811675
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||| ||||||  ||||||||||||| |||||||| ||||||| || |||  ||||||||||||||||||||||| |||||||||||||||||    
T  4811802 tggcttaattatacttttgatcctcgtgttttggcctactcatgaaactgatcatgcatttttaaaacagaacaaaacggtccttcaattatcatttttg 4811703  T
Q  165 ttgtatttttcgtcctaccccccatttt 192  Q
    ||| ||||||| || |||| || |||||    
T  4811702 ttgcatttttcatcatacctcctatttt 4811675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 122
Target Start/End: Complemental strand, 22534273 - 22534214
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcc 122  Q
    |||||||||||||||||||| |||||||| ||||| || |||||||||| ||||||||||    
T  22534273 tttggcttaattacacttttggtcctcgtattttgaccaactcacgaaaatggtcctgcc 22534214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 241
Target Start/End: Complemental strand, 35163627 - 35163557
Alignment:
Q  171 ttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgc 241  Q
    |||| |||||||| || |||||   |||||||||| |||||||||||||||||||| |||||| |||||||    
T  35163627 ttttagtcctacctcctattttcaactccaaaaacacagagaaatgacagttttaggcctaccccctatgc 35163557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 25472428 - 25472382
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  25472428 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 25472382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 28636612 - 28636566
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  28636612 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28636566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 31073558 - 31073512
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  31073558 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 31073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 31573855 - 31573901
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  31573855 ctccagaaacgcatagaaatgacagttttagtccaaccacctatgct 31573901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 39556125 - 39555946
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  39556125 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 39556026  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39556025 cgttgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 39555946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 31779197 - 31779021
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31779197 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 31779098  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||    
T  31779097 tgcatttttcgtcccaccccccattttattctccaaaaacgcagagaaatgtcagttttagacgtaccccctatgct 31779021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 5136983 - 5137156
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| || |||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  5136983 ttaattacacttttggtcctcgtgttttggccaactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 5137082  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5137083 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 5137156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 41046703 - 41046876
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||| | |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  41046703 ttaattacacttttggtcctcgtgttttggcctaattacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 41046802  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41046803 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 41046876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 66 - 240
Target Start/End: Original strand, 20840560 - 20840734
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||    
T  20840560 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcctttttaaaatagaacaaaacggtccttcaattatcatttttgt 20840659  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    || |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||    
T  20840660 tgcatttttcgtcctaccccccattttattctccttaaacgcagagaaatgacagttttagacctaccccctatg 20840734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 24301101 - 24300925
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||||||| ||| | ||||||||||||    
T  24301101 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgccattttaaaacaaaacaaaacggtccttcgagtatcatttttgt 24301002  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24301001 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 24300925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 37726929 - 37727105
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||||||||||||  || || ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||    
T  37726929 ggcttaattacacttttggtcctcgtgttttggtctgcttacgaaactggttctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 37727028  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37727029 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37727105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 23644462 - 23644638
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||| ||||| ||||||||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  23644462 ggcttaattacacttttggtcctcgtattttggcctactcacgaaattggtcctgccattttaaaacagaacaaaacagtccttcaattatcatttttgt 23644561  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  23644562 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 23644638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 43973441 - 43973608
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| || |  |||||||||||||||||||||||||||| ||||||||||||||||||    
T  43973441 ggcttaattacacttttggtcctcgtgttttgtcctactcacgaaaatgattatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 43973540  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    || |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  43973541 tgcatttttcgtcctaccccccattttattctccaaaaacgcagataaataacagttttagacctacc 43973608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 66 - 221
Target Start/End: Original strand, 48452989 - 48453144
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||| ||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  48452989 ggcttgattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 48453088  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 221  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48453089 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagt 48453144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 25853770 - 25853596
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||||||||  |||||||||||||  |||||||||||||||||| || | |||||||||||||||||| |||| ||||||||||||||||||||    
T  25853770 cttaattacacttttgatcctcgtgttttgctctactcacgaaactggtcttgtcattttaaaacagaacaaaatggtccttcaattatcatttttgttg 25853671  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  25853670 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 25853596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 63 - 240
Target Start/End: Complemental strand, 32535511 - 32535330
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatc----- 157  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||         
T  32535511 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattaa 32535412  T
Q  158 atttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  32535411 atttttgttgcatttttcgtccta-cccccattttattctccaaaaacgcagagaaatgatagttttagacctaacccctatg 32535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 26837900 - 26837725
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||| ||||||||| |||| |||||||||||||||||||| ||||||||||||    
T  26837900 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggttctgcccttt-aaaatagaacaaaacggtcattcaagtatcatttttgt 26837802  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  26837801 tgcattttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacttaccccctatgct 26837725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 30104482 - 30104657
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||| || | ||||||| ||||||||||||||||||    
T  30104482 ggcttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaacaaaatagaacggtccttcaattatcatttttgt 30104581  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||    
T  30104582 tgcatttttcgtccta-cccccattttattatctaaaaacgcagagaaatgacagttttagacctaccccctatgct 30104657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 27394122 - 27393946
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||| || ||||||||||||||||||    
T  27394122 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaataggtcctgcctttttaaaacagaacaaaacgatccttcaattatcatttttgt 27394023  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||| | |||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| | ||||||    
T  27394022 tgcattttccatcctacccccaattttattctccaaaaacgcagagaaataacagttttagacctaccccatatgct 27393946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 43973985 - 43973824
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43973985 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 43973886  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| || | ||| |||||||||||||||||||||||||    
T  43973885 tgcatttttcgtcctacctcctattttcataccccagaaacgcagagaaatgacagttttag 43973824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 70 - 242
Target Start/End: Complemental strand, 22425354 - 22425182
Alignment:
Q  70 taattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgta 169  Q
    ||||||||||||| |||||||||||| | |||||||||||| |||||| ||||||| |||||||||||||||||||  |||||||||||||||||||| |    
T  22425354 taattacacttttggtcctcgtgtttcggcctactcacgaatctggtcatgcccttgtaaaacagaacaaaacggtacttcaattatcatttttgttgca 22425255  T
Q  170 tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | | ||||||| ||||| ||||||||    
T  22425254 tttttcgtcctaccccccattttattctccaaaaacgcagagaaattagatttttagatctaccccctatgct 22425182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 26275108 - 26274936
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||| | |||| | ||| |||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||  |||||||||||||||||||     
T  26275108 ttaattataattttggcccttgtgttttgacctactcacgaaactggtcctacccttttaaaacagaataaaacggtccctcaattatcatttttgttgc 26275009  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  26275008 -tttttcgtcctaccccccattttattctccaaaaccgcagagaaatgacagttttagacctaccccctatgct 26274936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 37727478 - 37727314
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  37727478 tttggcttaattacacttttggtcctcatgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttt 37727379  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  37727378 tgttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 37727314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 17465037 - 17464860
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||| |||| |||||||||||||| ||||| || ||||||||||   ||||||||||| |||||||||||||| ||||||||||||||||||    
T  17465037 ggcttaattacatttttggtcctcgtgttttggcctacgcatgaaactggtctgacccttttaaaatagaacaaaacggtccttcaattatcatttttgt 17464938  T
Q  166 tgta-tttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || | ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17464937 tgcatttttttgtcctaccccccattttattctccaaaaatgcagagaaatgacagttttagacctaacccctatgct 17464860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 27393661 - 27393822
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  27393661 ggcttaattacacttttggtcctcgtgttttgacctactcacaaaactggtcctgccattttaaaacagaacaaaacggtccttcaattatcatttttgt 27393760  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||||||||||||||| ||||| |  | ||| |||||||||||||||||||||||||    
T  27393761 tgcatttttcgtcctaccccctattttcaaaccccagaaacgcagagaaatgacagttttag 27393822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 20841106 - 20840945
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  20841106 ggcttaattacacttttggtgctcgtgttttggcctactcacgaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgt 20841007  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  20841006 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 20840945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 39555578 - 39555739
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  39555578 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaatggtccttcaattatcatttttgt 39555677  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||| ||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  39555678 tgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 39555739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 66 - 228
Target Start/End: Complemental strand, 29801961 - 29801798
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29801961 ggcttaattacacttttgatcctcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgt 29801862  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 228  Q
    || ||||||||||| ||| || ||||| |  ||||| |||||||||||||||||| ||||||||    
T  29801861 tgcatttttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacaattttagac 29801798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 25612519 - 25612381
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||| ||| || |||||||||||||||||     
T  25612519 ttaattacacttttggtcctcgtgttttgacctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtcttttaattatcatttttgttgc 25612420  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  25612419 atttttcgtcctaccccccattttatcctccaaaaacgc 25612381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 4275909 - 4275748
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||||||||||||| || |||||||||||||||    
T  4275909 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaacaaaacggtcctttaattatcatttttgt 4275810  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  4275809 tgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatggcagttttag 4275748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 31778653 - 31778814
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  31778653 ggcttaattacacttttggtcctcgtgttttggtctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcgtttatcatttttgt 31778752  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  31778753 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 31778814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 25853233 - 25853395
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||    
T  25853233 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcatgcccttttaaaatagaacaaaacggtccttcaattatcatttttg 25853332  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| ||||||||| ||||| || ||||| |  ||||| |||||||||||||| ||||||||||    
T  25853333 ttgcatttttcgttctacctcctattttcaaactccagaaacgcagagaaataacagttttag 25853395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 17464491 - 17464652
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||| || ||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  17464491 ggcttaattacacttttggtcctcgtgttttggcctattcgcgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 17464590  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||| | |||||||||||||||||    
T  17464591 tgcatttttcgtcctacctcctattttcaaactccagaaacgtaaagaaatgacagttttag 17464652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 23645010 - 23644849
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| |||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23645010 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaattggtcctacccttttaaaacagaacaaaacggtcattcaattatcatttttgt 23644911  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||| ||||||| || ||||| |  ||| |  ||||||||||||||||||||||||    
T  23644910 tgcatttttcatcctacctcctattttcaaactctagtaacgcagagaaatgacagttttag 23644849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 30098308 - 30098147
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||    
T  30098308 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaactggtcttgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 30098209  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  || || ||||||||||| |||||||||||||    
T  30098208 tgcatttttcgtcctacctcctattttcaaacttcagaaacgcagagatatgacagttttag 30098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 5137526 - 5137365
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  5137526 ggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggttctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 5137427  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||| |||||| | || ||||| |  ||||| |||||||||||||||||||||||||    
T  5137426 tgcatttttagtcctatctcctattttcaaactccagaaacgcagagaaatgacagttttag 5137365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 50116955 - 50116812
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||||||||||  ||||||||||||| | ||||||||||| ||||| ||||||||| ||| ||||||||||||||||||| ||||||||||||    
T  50116955 tggcttaattacacttttgatcctcgtgttttgacttactcacgaaattggtcatgcccttttgaaagagaacaaaacggtcattcagttatcatttttg 50116856  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    ||| | |||||||||||||||||||||| | |||||||||||||    
T  50116855 ttgcaattttcgtcctaccccccattttttcctccaaaaacgca 50116812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 57 - 226
Target Start/End: Original strand, 22424805 - 22424975
Alignment:
Q  57 tatatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattat 156  Q
    ||||| || ||||||||||||||||| || |||||||||   |||||| ||||||||||| ||| ||||||||||||||||||||||||| |||||||||    
T  22424805 tatattttaggcttaattacacttttggttctcgtgtttaagcctacttacgaaactggttctgtccttttaaaacagaacaaaacggtccttcaattat 22424904  T
Q  157 catttttgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||| ||||||||||||||| || ||||| |  ||||| ||| |||||||||||||||||||||    
T  22424905 catttttgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagttttag 22424975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 32534962 - 32535120
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||     
T  32534962 ttaattacacttttggtcctcgtgttttggcatactcacgaaattggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 32535061  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||| | || | ||||||||||||||||||||    
T  32535062 atttttcgtcctacctcctattttcaaactctagaatcacagagaaatgacagttttag 32535120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 26837363 - 26837521
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||| |||| ||||| || ||||| ||||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||||||||||||||||     
T  26837363 ttaattacatttttggtccttgtattttggcctactcacgaaattggtcctgcccttttataacataacgaaacggtccttcaattatcatttttgttgc 26837462  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  26837463 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 26837521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 29801355 - 29801477
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| ||| |||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  29801355 tggcttaattacacttttggtcatcgtgttttggcatactcacaaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcatttttg 29801454  T
Q  165 ttgtatttttcgtcctacccccc 187  Q
    ||| |||||||||| ||||||||    
T  29801455 ttgcatttttcgtcttacccccc 29801477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 26274570 - 26274728
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||| ||||  |||| || |||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  26274570 ttaattacatttttgatccttgtattttggactactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 26274669  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |||||||||| |||| || ||||| |  ||||| ||||||||  |||||||||||||||    
T  26274670 atttttcgtcatacctcctattttcaaactccagaaacgcagttaaatgacagttttag 26274728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 64 - 205
Target Start/End: Complemental strand, 23228554 - 23228414
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||||| || || |||||||||||||| ||||||||  ||| ||||||||||||||||    
T  23228554 ttggcttaattacacttttggtccccgtgttttggcctactcacgaaaatgatcatgcccttttaaaac-gaacaaaattgtccttcaattatcattttt 23228456  T
Q  164 gttgtatttttcgtcctaccccccattttattctccaaaaac 205  Q
     ||| ||||||||||||||| |||||||||| ||||||||||    
T  23228455 attgcatttttcgtcctacctcccattttatcctccaaaaac 23228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 24300560 - 24300717
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||| |||| ||| |||||||||| | || ||||||||||||||||| ||||||||||||||| ||||||||  ||||||||||||||||||||     
T  24300560 ttaattacatttttggtc-tcgtgttttggcttattcacgaaactggtcctgtccttttaaaacagaataaaacggttcttcaattatcatttttgttgc 24300658  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    | ||||||||| ||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  24300659 aattttcgtcccacctcctattttcaaactccagaaacgcagagaaatgacagttttag 24300717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 41047239 - 41047083
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||  ||| || ||||||| |||||||||||||||||| ||| ||||||||||||||| ||||| ||| ||||||||||||||||||||     
T  41047239 ttaattacactttc-gtcttcatgttttggcctactcacgaaactggttctgtccttttaaaacagaataaaac-gtccttcaattatcatttttgttgc 41047142  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  41047141 atttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 41047083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 32697244 - 32697106
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||| | |||| |||||||||||||  ||||||||||||| | |||  ||||||||||||||||||||||  ||  |||||||||||||||||||    
T  32697244 gcttaattatatttttggtcctcgtgttttagcctactcacgaaattagtcacgcccttttaaaacagaacaaaattgtgcttcaattatcatttttgtt 32697145  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacg 206  Q
    | |||||||||||||| ||||||||||| |||||||||||    
T  32697144 gcatttttcgtcctac-ccccattttatcctccaaaaacg 32697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 51474879 - 51474737
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| || | ||||||||| | ||||||||||| ||||| ||||||||||||||| |||||||  ||| || | |||||||||||||    
T  51474879 ggcttaattacacttttggttcccgtgttttggcatactcacgaaattggtcatgcccttttaaaacataacaaaattgtcctttagttatcatttttgt 51474780  T
Q  166 tgtatttttcgtcctacccccca-ttttattctccaaaaacgc 207  Q
    || |||||||||||||||||| | |||||| ||||||||||||    
T  51474779 tgcatttttcgtcctacccccaatttttatcctccaaaaacgc 51474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 37220557 - 37220698
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||| ||||| ||||||||| | |  | || ||| |||||||||||||| ||||  ||| |||| |||||||||||||    
T  37220557 ggcttaattacacttttggtcctcgtattttggcctactcacaatatcgatcatgctcttttaaaacagaataaaattgtccttcagttatcatttttgt 37220656  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    || | |||||||||||||| ||||||||| ||||||||||||    
T  37220657 tgcacttttcgtcctaccctccattttatcctccaaaaacgc 37220698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 25420684 - 25420542
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||||||||  || |||| ||||| ||||||||||||| || ||  |||||||||||| |||| ||||  ||| ||||||||| ||||||||||    
T  25420684 cttaattacacttttgatcatcgtattttgacctactcacgaaattgatcacgcccttttaaaatagaataaaattgtccttcaattattatttttgttg 25420585  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcaga 210  Q
     |||||||||| ||||||||||||||| || |||||| |||||    
T  25420584 catttttcgtcataccccccattttatccttcaaaaatgcaga 25420542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 45965938 - 45966076
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||  |  |||||| ||||||||||| |||||||  ||| ||| |||||||||| |||    
T  45965938 ggcttaattacacttttggtcctcgtgttttggcatactcacgaagttaatcctgctcttttaaaacataacaaaaatgtccttcgattatcatttgtgt 45966037  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaa 204  Q
    || ||||||||| ||| |||||||||| | |||||||||    
T  45966038 tgcatttttcgttctaacccccattttctcctccaaaaa 45966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 67 - 180
Target Start/End: Original strand, 51473429 - 51473542
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| ||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||||  ||| |||  ||||||||||||||    
T  51473429 gcttaattacacttttggtcctcgtgttttggtctattcacgaaattggtcctgcccttttaaaacagaacaaaattgtccttcggttatcatttttgtt 51473528  T
Q  167 gtatttttcgtcct 180  Q
    | | |||| |||||    
T  51473529 gcacttttggtcct 51473542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 100 - 194
Target Start/End: Complemental strand, 18010256 - 18010162
Alignment:
Q  100 ctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttat 194  Q
    |||||||||||| |||| | ||||||||||||||||||||||  || ||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  18010256 ctactcacgaaaatggttccgcccttttaaaacagaacaaaattgttattcaattatcatttttgttgcatttttcgtcctgccctccattttat 18010162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 37222116 - 37222040
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaac 142  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||| |||||||||||||||||||    
T  37222116 ggcttaattacacttttggtcctcgtgttttgccctactcacaaaattggtcctgccattttaaaacagaacaaaac 37222040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 242
Target Start/End: Original strand, 55192113 - 55192293
Alignment:
Q  61 tgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcc-cttttaaaacagaacaaaacggtcattcaattatcat 159  Q
    ||||||||||||||||||||||||||| ||  ||||| ||  ||||||||| |||||  ||| |||| ||| || |||||||| |||  | || ||| ||    
T  55192113 tgtttggcttaattacacttttagtccccgcattttgaccagctcacgaaaatggtctcgcctctttcaaatca-aacaaaaccgtccataaactat-at 55192210  T
Q  160 ttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     ||| ||||| |||| |||||||| || |||||   ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  55192211 gttttttgtagttttagtcctacctcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 55192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 25419145 - 25419285
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggt-cattcaattatca-tttttg 164  Q
    |||| |||| |||||| ||| |||||||||  | ||||||||||| | || ||||||||||||||||||||||||| || | ||||||||||| |||||     
T  25419145 gcttgattatacttttggtcttcgtgttttagcttactcacgaaattagttctgcccttttaaaacagaacaaaactgtcctttcaattatcattttttt 25419244  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    ||| | |||| |||||  |||||||||||  ||||||||||||    
T  25419245 ttgcagttttagtccttacccccatttta--ctccaaaaacgc 25419285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 29801532 - 29801592
Alignment:
Q  182 ccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||| |||| | ||||||    
T  29801532 ccccccattttattcttcaaaaatgcagagaaatgacagttttagacatacctcatatgct 29801592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 23227319 - 23227398
Alignment:
Q  129 aaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    ||||||||||||   ||| | ||||| |||||||||||| |||||||||||| | ||||||||||| |||||||||||||    
T  23227319 aaacagaacaaatttgtcctccaattttcatttttgttgcatttttcgtccttctccccattttatcctccaaaaacgca 23227398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 49407925 - 49407971
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  49407925 ctccaaaaacgcagagaaatgacaattttagacctaccccctatgct 49407971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 37075818 - 37075864
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||    
T  37075818 ctccagaaacgcagagaaatgaccgttttagacctaccccctatgct 37075864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 55390143 - 55389967
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||  ||||  || | |||||||| ||||||| || |||| |||   |||||||  |||| | || ||| || ||| |    
T  55390143 ggcttaattacacttttggtcctcgcattttaaccaattcacgaaaatggtcctaccttttttaaatcaaacaaaatcgtcactaaactat-atgttttt 55390045  T
Q  166 tgtatttttcgtcctacccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||| |||| |||||||| ||| ||||    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  55390044 tgtagttttagtcctacctccctatttccaactccataaacgcacagaaatgacagttttagtccaaccacctatgct 55389967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 27200237 - 27200062
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||| |  ||||| ||  ||||||||| |||| |||||  ||| |||  |||||| || ||| |  || |||||| ||| |    
T  27200237 ggcttaattacacttttggtccttgcattttgaccagctcacgaaaatggttctgcctctttcaaatcgaacaataccgtccta-aactatcatgttttt 27200139  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || | |||| ||| |||| || |||||   ||||| ||||||||||||||||||| |||||||||||| | ||||||    
T  27200138 tgcagttttagtcatacctcctattttcaactccagaaacgcagagaaatgacaggtttagacctaccccttatgct 27200062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 32730805 - 32730759
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  32730805 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 32730759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 47431827 - 47431873
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  47431827 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 47431873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 50662828 - 50662782
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  50662828 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 50662782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 51473271 - 51473225
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| | ||||||||||||||| || ||||||||||||    
T  51473271 ctccaaaaacgcacataaatgacagttttagtccaaccacctatgct 51473225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 52375877 - 52375824
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcct 119  Q
    ||||||||||||||||| |||||||  ||||| || |||||||||| |||||||    
T  52375877 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 52375824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 22370599 - 22370671
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaa 141  Q
    |||||||||||||| |||||||  ||||| || |||||||||| ||||||| || |||| ||||  |||||||    
T  22370599 ttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcctaccttttttaaaccaaacaaaa 22370671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 193
Target Start/End: Original strand, 32695706 - 32695830
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||| |||| |||||| | ||||| |||||| |||||| || |  || | ||||||||||||||||||  ||| | | ||||| ||||||||||     
T  32695706 ttaattacatttttggtcctcatattttggcctacttacgaaattgattatgtctttttaaaacagaacaaaattgtcctacgattattatttttgttgc 32695805  T
Q  169 atttttcgtcctaccccccatttta 193  Q
    | |||| |||||  ||| |||||||    
T  32695806 aattttagtccttaccctcatttta 32695830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 34105058 - 34105018
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  34105058 aaacgcacagaaatgacagttttagtccaaccacctatgct 34105018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 49407796 - 49407872
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaac 142  Q
    ||||||||||||||||| |||||||  ||||| ||  ||||||||| ||||| ||||  ||| ||| ||||||||||    
T  49407796 ggcttaattacacttttggtcctcgcattttgaccagctcacgaaaatggtcatgcctctttcaaatagaacaaaac 49407872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 51472985 - 51473029
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||    
T  51472985 ctccataaacgcacagaaatgacagttttagtccaaccacctatg 51473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 150; Significance: 2e-79; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 19830423 - 19830596
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  19830423 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 19830522  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19830523 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 19830596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 19590525 - 19590701
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19590525 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590624  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19590625 tgcatttttcatcctaccccccattttattctccaaaaacccagagaaatgacagttttagacctaccccctatgct 19590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 37786767 - 37786943
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  37786767 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 37786866  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37786867 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 37786943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 38858643 - 38858819
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||| |||||||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  38858643 ggcttaataacacttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtcattcaattatcatttttgt 38858742  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  38858743 tgcatttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacccactatgct 38858819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 2659385 - 2659211
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||| |||| ||||||| |||||| |||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2659385 ggcttaattacaattttggtcctcgcgttttggcctattcatgaaactggtcttgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 2659286  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2659285 tgcatttttcatcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 2659211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 34534336 - 34534162
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| |||||| || ||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  34534336 ggcttaattatacttttggttctcgtgttttggcctactcacgaaactgatcctgcccatttaaaacagaacaaaacggtccttcaattatcatttttgt 34534237  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  34534236 tgcatttttcgtcctaccccccattttattctccaaaaaaacagagaaatgacagttttagacctaccacctatg 34534162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 29100393 - 29100220
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||||||||||||||  |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  29100393 ttaattacacttttggtcctcgtgttttggtctactcacaaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 29100294  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  29100293 attttttgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 29100220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 63 - 240
Target Start/End: Complemental strand, 32005162 - 32004985
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||| ||||||| | ||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||||||    
T  32005162 tttggcttaattacacttttggtcctcatgttttggcatactcacgaaactggtcatgcccttttaaaatagaacaaaacggtcctttaattatcatttt 32005063  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32005062 tgttgcatttttcgtcctactccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 32004985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 66 - 240
Target Start/End: Complemental strand, 35289446 - 35289272
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  35289446 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcattttggt 35289347  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    || |||||||||| ||||||||||||||||||| |||||||||||||||| | ||||||||||||||| ||||||    
T  35289346 tgcatttttcgtcataccccccattttattctctaaaaacgcagagaaataatagttttagacctaccccctatg 35289272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 4641443 - 4641616
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| | ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||     
T  4641443 ttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcctgctcttttgaaacataacaaaacggtcattcaattatcatttttgttgc 4641542  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| || ||||||||    
T  4641543 atttttcgtcctaccccccattttattctccaaaaatgcagagaaatgatagttttagacctgccccctatgct 4641616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 72 - 242
Target Start/End: Complemental strand, 23953268 - 23953099
Alignment:
Q  72 attacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatt 171  Q
    |||||| |||| ||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| |||    
T  23953268 attacatttttggtcctcgtgttttgatctactcacgaaactggtcccgccctttcaaaacagaacaaaacggtccttcaattatcatttttgttgcatt 23953169  T
Q  172 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  23953168 tttcgtcataccccccattttattctccaaaaacgcagagaaataacagttttagacatacc-cctatgct 23953099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 19591070 - 19590909
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19591070 ggcttaattacacttttggtactcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 19590971  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  19590970 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 19590909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 4478242 - 4478070
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||||||||| || |  ||| ||||||||||||||||||||     
T  4478242 ttaagtacacttttgatcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaataacattgtccttcaattatcatttttgttgc 4478143  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||| || ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  4478142 atttttcgtcttatccctcattttattctccaaaaacgcagagaaataacagttttagacctacc-cctatgct 4478070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 2658839 - 2659000
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  2658839 ggcttaattacactttttgtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaatagaacaaaatggtccttcaattatcatttttgt 2658938  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||||||| |||| || ||||| |  ||||||||||||||||||||| |||||||||    
T  2658939 tgcatttttcgtcatacctcctattttcaaactccaaaaacgcagagaaatggcagttttag 2659000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 38859186 - 38859025
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  38859186 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttccattatcatttttgt 38859087  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  38859086 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgatagttttag 38859025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 34533791 - 34533952
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||| |||||||||||||| |||| |||||||||||||||||||||||    
T  34533791 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgctcttttaaaacagaataaaatggtcattcaattatcatttttgt 34533890  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||| ||||||||| || ||||| |  |||||||||||||||||||||||| ||||||    
T  34533891 tgcattttccgtcctacctcctattttcaaactccaaaaacgcagagaaatgacacttttag 34533952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 32004614 - 32004774
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  32004614 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattgatcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgt 32004713  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    || |||||||| |||||| || ||||| |  ||||| ||||||||||||||||||||||||    
T  32004714 tgcatttttcgccctacctcctattttcaaactccagaaacgcagagaaatgacagtttta 32004774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 66 - 224
Target Start/End: Complemental strand, 37787312 - 37787153
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| |||||| |||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  37787312 ggcttaattatacttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaatcagaacaaaacggttcttcaattatcatttttgt 37787213  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttt 224  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||    
T  37787212 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagtttt 37787153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 35288900 - 35289063
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  35288900 tttggcttaattacacttttggtcatcgtattttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttt 35288999  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    ||||| ||||||||||||||  |  ||||| |  ||||| |||| |||||||||||||||||||    
T  35289000 tgttgcatttttcgtcctacttcatattttcaaactccagaaacacagagaaatgacagtttta 35289063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 28584466 - 28584326
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    |||||||||||||||| ||||||||| |||| |||| |||||||| ||||| || ||||||||||||||||||||  ||| |||||||||||||||||||    
T  28584466 gcttaattacacttttcgtcctcgtgctttggcctattcacgaaattggtcatgtccttttaaaacagaacaaaattgtccttcaattatcatttttgtt 28584367  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||||||||| ||||||||||||||| ||||||||||||    
T  28584366 gtatttttcgtcttaccccccattttatcctccaaaaacgc 28584326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 66 - 208
Target Start/End: Original strand, 38160951 - 38161093
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||||| |||||| ||||||||||||| |  ||||||||||||||||||||||||||  ||| ||||||||| ||||||||    
T  38160951 ggcttaattacacttttggtcctcgggttttggcctactcacgaaaataatcctgcccttttaaaacagaacaaaattgtccttcaattattatttttgt 38161050  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    || |||||||||||||| ||||||||||| |||||||||||||    
T  38161051 tgcatttttcgtcctactccccattttatcctccaaaaacgca 38161093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 19830964 - 19830804
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||  ||||||||||||||||||    
T  19830964 ggcttaattacacttttggtcctcgtgttttggcctactcacaaaactggtcctgtccttttaaaacataacaaaacggtacttcaattatcatttttgt 19830865  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||| |||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  19830864 tgcattttt-gtcctacctcctattttcaaactccagaaacacagagaaatgacagttttag 19830804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 29099863 - 29100011
Alignment:
Q  79 ttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtc 178  Q
    |||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  29099863 ttttggtcctcgtgttttggcctactcacgaaactgatcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgcatttttcgtc 29099962  T
Q  179 ctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||| || ||||| |  | ||| ||||| ||| |||||||||||||||    
T  29099963 ctacctcctattttcaaaccccagaaacgtagataaatgacagttttag 29100011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 23952730 - 23952892
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcc-tactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||| |    
T  23952730 ggcttaattacacttttggtcctcgtgttttgaccctactcacgaaattggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattttgg 23952829  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| |||||||||||||||  | ||||| |  | ||| |||||||||||||||| ||||||||    
T  23952830 ttgcatttttcgtcctaccttctattttcaaaccccagaaacgcagagaaatgatagttttag 23952892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 204
Target Start/End: Original strand, 28583439 - 28583577
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||| || | |||| |||||||||||||||| || ||||| ||| |||||||||||||||| |    
T  28583439 ggcttaattacacttttggtcctcgtgttttggcctactcatgagattggttctgcccttttaaaacataataaaactgtccttcaattatcatttttat 28583538  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaa 204  Q
    || |||||||||||||||||||||||||| |||||||||    
T  28583539 tgcatttttcgtcctaccccccattttatcctccaaaaa 28583577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 4641983 - 4641828
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||   |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||     
T  4641983 ttaattacacttttggtcctcgtgttttggcctactcac---actggtcctgtccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 4641887  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||||||||  || ||||| |  ||| | |||||||||||||||||||||||||    
T  4641886 atatttcgtcctacgtcctattttcaaactctagaaacgcagagaaatgacagttttag 4641828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 26026734 - 26026688
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||    
T  26026734 ctccaaaaacgcatagaaatgacagttttagtccaaccacctatgct 26026688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 48247721 - 48247767
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||    
T  48247721 ctccaaaaacgcacagaaatgacagttttagtccaaccacctatgct 48247767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 32427432 - 32427399
Alignment:
Q  200 aaaaacgcagagaaatgacagttttagacctacc 233  Q
    ||||||||||||||||||||||||||||||||||    
T  32427432 aaaaacgcagagaaatgacagttttagacctacc 32427399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 9181662 - 9181708
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  9181662 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 9181708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 24929719 - 24929673
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| ||||||||||||||||| || || |||||||||    
T  24929719 ctccaaaaacgcacagaaatgacagttttagtccaacgacctatgct 24929673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 26048078 - 26048124
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  26048078 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 26048124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 28687915 - 28687869
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  28687915 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 28687869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 35579028 - 35579074
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| |||||||||||||||||| ||||||||||| | ||||||||    
T  35579028 ctccagaaacgcagagaaatgacatttttagacctatcccctatgct 35579074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 35579298 - 35579256
Alignment:
Q  200 aaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||| ||||| ||||||||||||||||| ||||||||    
T  35579298 aaaaacgcagggaaataacagttttagacctaccccctatgct 35579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 48248007 - 48247961
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  48248007 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 48247961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 39137079 - 39137014
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcc-cttttaaa 130  Q
    |||||||||||||||||  ||||||| ||||| ||  ||||||||| |||||||||| ||||||||    
T  39137079 ggcttaattacacttttgatcctcgtattttgacccgctcacgaaaatggtcctgcctcttttaaa 39137014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 11973812 - 11973772
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  11973812 aaacgcacagaaatgacagttttagtccaaccacctatgct 11973772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 27245200 - 27245256
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcct 119  Q
    |||||||||||||||||||| ||||| |  ||||| || |||||||||| |||||||    
T  27245200 tttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 27245256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 4793 - 4969
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  4793 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 4892  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  4893 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacctaccccctatgct 4969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 5334 - 5179
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||||||| || ||||||||||||||| |||||||| |||||||||||||||||||||    
T  5334 cttaattacacttttggtcctcgtgttttggcctagtcacgaaactggtcttgtccttttaaaacagaataaaacggtaattcaattatcatttttgttg 5235  T
Q  168 tatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     ||||||||||||    || ||||| |  ||||| ||||||||| |||||||||||||||    
T  5234 catttttcgtcct----cctattttcaaactccagaaacgcagaaaaatgacagttttag 5179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 148; Significance: 3e-78; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 69 - 240
Target Start/End: Original strand, 11090524 - 11090695
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  11090524 ttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 11090623  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  11090624 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 11090695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 239353 - 239528
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  239353 ggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcctgcc-ttttaaaacagaacaaaacggtccttcaattatcatttttgt 239451  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  239452 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctatcccctatgct 239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 40027140 - 40027316
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  40027140 ggcttaattacacttttggtcatcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 40027239  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40027240 tgcattttttgtcctaccctccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 40027316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 18451376 - 18451199
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||    
T  18451376 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaatagtccttcaaatatcatttttgt 18451277  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgctt 243  Q
    || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  18451276 tgcatttttcttcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgctt 18451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 22374320 - 22374485
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  22374320 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22374419  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 231  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  22374420 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgatagttttagaccta 22374485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 40815887 - 40815714
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||| | ||||||||||||||||||||     
T  40815887 ttaattacacttttggtcctcgtgttttggcctactcacgaaactggtaatgcccttttaaaacagaacaaaacggcccttcaattatcatttttgttgc 40815788  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  40815787 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 40815714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 65 - 242
Target Start/End: Original strand, 43058332 - 43058509
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||||||||||  ||||||||||||| || |||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  43058332 tggcttaattacacttttgatcctcgtgttttggccaactcactaaactggtcctgcctttttaaaacagaacaaaacggtccttcaattatcatttttg 43058431  T
Q  165 ttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  43058432 ttgcatttttcgttctaccccccattttattctccaaaaacgtagagaaatgacagttttagacctaccccctatgct 43058509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 1978108 - 1978284
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||| |||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1978108 ggcttaattacatttttggtccttgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 1978207  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  1978208 tgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 1978284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 63 - 240
Target Start/End: Original strand, 28616610 - 28616788
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||    
T  28616610 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttt 28616709  T
Q  163 tgttgtatttttcgtcctaccccccattttattctcc-aaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||| | ||||||||||||||||||||||||| ||| ||||||||||||||||  |||||||||||||||| ||||||    
T  28616710 tgttgcaattttcgtcctaccccccattttattatccaaaaaacgcagagaaatagcagttttagacctaccccctatg 28616788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 66 - 231
Target Start/End: Original strand, 26538097 - 26538262
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  26538097 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggttctgcccttttaaaacagaacaaagcggtccttcaattatcatttttgt 26538196  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagaccta 231  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  26538197 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaataacagttttagaccta 26538262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 69 - 239
Target Start/End: Original strand, 14432145 - 14432315
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||||| | |||||||||||| ||||| ||||||||||||||     
T  14432145 ttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcttgcccttttaaaatataacaaaacggtccttcaactatcatttttgttgc 14432244  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctat 239  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14432245 atttttggtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctat 14432315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 26538624 - 26538456
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  26538624 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccctcttaaaacagaacaaaacggtccttcaattatcatttttgt 26538525  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    || |||||||||||||||||||||||| |  | ||| ||||||||||||||||||||||||||||||||    
T  26538524 tgcatttttcgtcctaccccccattttcaaaccccagaaacgcagagaaatgacagttttagacctacc 26538456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 72 - 242
Target Start/End: Original strand, 3025472 - 3025641
Alignment:
Q  72 attacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatt 171  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||    
T  3025472 attacatttttggtcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaagtatcatttttgttgcatt 3025571  T
Q  172 tttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||    
T  3025572 tttcgtccta-cccccattttattctcaaaaaacgcaaagaaatgacagttttagacctaccccctatgct 3025641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 69 - 233
Target Start/End: Complemental strand, 8425902 - 8425738
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| || || ||||||||  |||||||||||| ||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||     
T  8425902 ttaattacacttttggttcttgtgttttggtctactcacgaaattggtcctgcccttttaaaatagaacaaaactgtccttcaattatcatttttgttgc 8425803  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8425802 atttttcgtcttacccccaattttattctccaaaaacgcagagaaatgacagttttagacctacc 8425738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 66 - 222
Target Start/End: Original strand, 7446342 - 7446497
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  |||||||||||||  ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  7446342 ggcttaattacacttttgatcctcgtgttttggtctactcatgaaattggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttat 7446441  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagtt 222  Q
    || |||||||||| || ||||||||||||||||||||||||||||||||||||||||    
T  7446442 tgcatttttcgtcata-cccccattttattctccaaaaacgcagagaaatgacagtt 7446497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 7446891 - 7446730
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||| ||||  ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7446891 ggcttaattacatttttgatcctcgtgttttgccttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 7446792  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  |||||||||||||||||||||||||||||||    
T  7446791 tgcatttttcgtcctacctcctattttcaaactccaaaaacgcagagaaatgacagttttag 7446730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 20444749 - 20444890
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  20444749 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgt 20444848  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    || | |||||||||||||||||||||||| ||||||||||||    
T  20444849 tgcagttttcgtcctaccccccattttatcctccaaaaacgc 20444890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 18450830 - 18450991
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |    
T  18450830 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtccagcccttttaaaacagaacaaaacggtccttcaattatcattttttt 18450929  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||| |||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  18450930 tgcatttttagtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 18450991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 40815342 - 40815506
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||  |||||||||||||||    
T  40815342 tttgtcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggttcttcaattatcatttt 40815441  T
Q  163 tgttgtatttttcgtcctacccccca-ttttattctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||| ||||||||||||||| || | |||||  ||||| |||||||||||||||||||||||||    
T  40815442 tgttgcatttttcgtcctacctcctatttttaaactccagaaacgcagagaaatgacagttttag 40815506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 40027682 - 40027524
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||     
T  40027682 ttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgttgc 40027583  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||||| |||||||| |||||| |||||||||    
T  40027582 atttttcgtcctacctcctattttcaaactccataaacgcagtgaaatggcagttttag 40027524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 11091065 - 11090904
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||    
T  11091065 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcattattgt 11090966  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |||||||||||||||| | || ||||| |  ||||| ||||||||| |||||||| ||||||    
T  11090965 tgtatttttcgtcctatctcctattttcaaactccagaaacgcagataaatgacaattttag 11090904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 207
Target Start/End: Complemental strand, 20440576 - 20440436
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  20440576 ggcttaattacacttttggtcctcgtgttttggccaactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcagttatcatttttgt 20440477  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    || | ||||||||||| |||||| ||||| ||||||||||||    
T  20440476 tgcagttttcgtcctatccccca-tttatcctccaaaaacgc 20440436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 22374870 - 22374709
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  22374870 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcttgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 22374771  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||| | ||| |||||||||||||||||||||    
T  22374770 tgcatttttcgtcctacctcctattttcaaactctagaaatgcagagaaatgacagttttag 22374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 64 - 207
Target Start/End: Original strand, 35779706 - 35779849
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    ||||||||||||||||||| |||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||||||||    
T  35779706 ttggcttaattacacttttggtcctcgtgttttgacatactcacgaaaatggtcctgccattttaaaacagaacaaaattgtccttcaattatcattttt 35779805  T
Q  164 gttgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||| |||||| ||||||||||||||||||| ||||||||||||    
T  35779806 gttgcattttttgtcctaccccccattttatcctccaaaaacgc 35779849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 35781207 - 35781067
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||  || |||||||||||||||||||    
T  35781207 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaactatccttcaattatcatttttgtt 35781108  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    | ||||||||||||| |||||||||||| ||||||||||||    
T  35781107 gcatttttcgtcctaacccccattttatcctccaaaaacgc 35781067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 28617159 - 28616998
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||    
T  28617159 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggttctgtccttttaaaacagaacaaaatggtccttcaattatcatttttgt 28617060  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || |||||||||| |||| || ||||| |  ||||| ||||||||||||||  |||||||||    
T  28617059 tgcatttttcgtcttacctcctattttcaaactccagaaacgcagagaaatagcagttttag 28616998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 43058877 - 43058717
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||| ||||||    
T  43058877 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggtcctgctcttttaaaacagaacaaaatggtccttcaattatca-ttttgt 43058779  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  43058778 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcagttttag 43058717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 239896 - 239736
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  239896 gcttagttacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaatggtccttcaattatcatttttgtt 239797  T
Q  167 gtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    |  ||||||||| |||| || ||||| |  ||||| ||||||||||||||| |||||||||    
T  239796 gcgtttttcgtcatacctcctattttcaaactccagaaacgcagagaaatggcagttttag 239736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 68 - 207
Target Start/End: Original strand, 8972239 - 8972378
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||||||||| | | ||||||||| ||||| |||||||| ||||||||||||||  ||||||||||||||||||||||||    
T  8972239 cttaattacacttttggtcctcgtgttttggcatgctcacgaaaatggtcatgccctttcaaaacagaacaaaattgtcattcaattatcatttttgttg 8972338  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
     ||||||||| |||||||| ||||||| ||||||||||||    
T  8972339 catttttcgttctaccccctattttatcctccaaaaacgc 8972378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 1978654 - 1978528
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  1978654 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgt 1978555  T
Q  166 tgtatttttcgtcctaccccccatttt 192  Q
    || |||||| |||||||| || |||||    
T  1978554 tgcattttttgtcctacctcctatttt 1978528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 183
Target Start/End: Complemental strand, 28847240 - 28847123
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||| |||| ||||||||||||||  |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||||    
T  28847240 ggcttaattacatttttggtcctcgtgttttggtctactcacgaaactggtcctgctcttttaaaacaaaacaaaacggtccttcaattatcatttttgt 28847141  T
Q  166 tgtatttttcgtcctacc 183  Q
    || |||||||||||||||    
T  28847140 tgcatttttcgtcctacc 28847123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 3026009 - 3025848
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    ||||||||||||||| |||| |||||||||||||| | ||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||| |||||    
T  3026009 tttggcttaattaca-ttttggtcctcgtgttttggcttactcacgaaattggttctgcccttttaaaaca-aacaaaacggtccttcaattattatttt 3025912  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    ||||| ||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  3025911 tgttgcatttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 3025848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 69 - 225
Target Start/End: Original strand, 8425358 - 8425514
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||||| |||||||| ||||||||||||| ||||| | || ||||||||||||||||||||||| |||||||||||||| |||||     
T  8425358 ttaattacacttttggtccttgtgttttggcctactcacgaaattggtcttacctttttaaaacagaacaaaacggtc-ttcaattatcatttgtgttgc 8425456  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    ||||||||||||||| || ||||| |  ||||| ||| ||||||||||||||||||||    
T  8425457 atttttcgtcctacctcctattttcaaactccagaaatgcagagaaatgacagtttta 8425514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 68 - 206
Target Start/End: Complemental strand, 15552596 - 15552459
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| ||| |  ||||||| ||||||||||||| || ||| ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  15552596 cttaattacacttttggtcataatgttttggcctactcacgaaaatgatcc-gcccttttaaaacagaacaaaattgtcattcaattatcatttttgttg 15552498  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacg 206  Q
    ||||||||||||||||| |||||||   |||||||||||    
T  15552497 tatttttcgtcctaccctccattttgccctccaaaaacg 15552459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 15551501 - 15551641
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| ||||||||||||||   ||||||||||| ||||| |||| |||||||||| |||||||  ||| |||| |||||||||||||||    
T  15551501 cttaattacacttttggtcctcgtgttttggtttactcacgaaaatggtcatgcctttttaaaacaaaacaaaaatgtccttcagttatcatttttgttg 15551600  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
     ||||||||||| |||| ||||||||| |||||||||||||    
T  15551601 catttttcgtccaaccctccattttatcctccaaaaacgca 15551641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 14432684 - 14432525
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||| |||| |||||||||||||| |||||||| |||||||||| |||| ||||||||||||| |||| |||  ||||||||| ||||||||||    
T  14432684 cttaattacatttttggtcctcgtgttttggcctactcatgaaactggtcatgccattttaaaacagaataaaatggttcttcaattattatttttgttg 14432585  T
Q  168 tatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     ||||||| ||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  14432584 catttttcatcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 14432525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 28143575 - 28143400
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||| ||||||| |||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||||||  |||  | || |||||| ||| |    
T  28143575 ggcttaatttcacttttggtcctcgcattttgaccagctcacgaaaatggtcctgcctctttcaaatcgaacaaaatcgtccctaaactatcatgttt-t 28143477  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || | |||| |||||||  || |||||   ||||| |||||||||||||||||||||||||||||||| ||||||||    
T  28143476 tgcagttttagtcctacgtcctattttcaactccagaaacgcagagaaatgacagttttagacctaccccctatgct 28143400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 43216255 - 43216202
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcct 119  Q
    ||||||||||||||||||||||| | |||||| || |||||||||| |||||||    
T  43216255 ggcttaattacacttttagtccttgcgttttgaccaactcacgaaattggtcct 43216202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 4356172 - 4356126
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  4356172 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4356126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 4809009 - 4809055
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  4809009 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 4809055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 5560966 - 5560920
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  5560966 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 5560920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 11540054 - 11540008
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  11540054 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 11540008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 16953350 - 16953304
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| ||||||||||||||||| || |||| |||||||    
T  16953350 ctccaaaaacgcacagaaatgacagttttagtccaaccaactatgct 16953304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 42192658 - 42192612
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  42192658 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 42192612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 4355753 - 4355806
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtc 117  Q
    ||||||||||||||||||| ||||| |  ||||| ||||||||||||| |||||    
T  4355753 ttggcttaattacacttttggtccttgcattttgacctactcacgaaattggtc 4355806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 42192789 - 42192736
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcct 119  Q
    ||||||||||||||||| |||||||  ||||| || |||||||||| |||||||    
T  42192789 ggcttaattacacttttggtcctcgcattttgaccaactcacgaaaatggtcct 42192736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 6949993 - 6949937
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcct 119  Q
    |||||||||||||||||||| ||||| |  ||||| || |||||||||| |||||||    
T  6949993 tttggcttaattacacttttggtccttgcattttgaccaactcacgaaattggtcct 6949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 33921021 - 33920981
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  33921021 aaacgcacagaaatgacagttttagtccaaccacctatgct 33920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Original strand, 42192237 - 42192293
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcct 119  Q
    |||||||||||||||||||| ||||||   ||||| || |||||||||| |||||||    
T  42192237 tttggcttaattacacttttggtcctcacattttgaccaactcacgaaaatggtcct 42192293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 43215839 - 43215883
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    ||||||||||| | ||||||||||||||||| || ||||||||||    
T  43215839 ctccaaaaacgaatagaaatgacagttttagtccaaccacctatg 43215883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0951
Description:

Target: scaffold0951; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 66 - 240
Target Start/End: Original strand, 1667 - 1841
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||    
T  1667 ggcttaattacacttttggtcctcctgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaatgttccttcaattatcatttttgt 1766  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatg 240  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1767 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatg 1841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0951; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 2212 - 2051
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2212 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 2113  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  2112 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 2051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 143; Significance: 3e-75; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 66 - 248
Target Start/End: Original strand, 64302 - 64484
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  64302 ggcttaattacacttttggtcctcgtgttttgacatactcacgaaactgatcctgaccttttaaaacagaacaaaacggtccttcaattatcatttttgt 64401  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgcttctcca 248  Q
    || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  64402 tgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgcttttcca 64484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 64847 - 64735
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||     
T  64847 ttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcccgcccttttaaaacagaacaaaacggtcctttaattatcatttttgttgc 64748  T
Q  169 atttttcgtccta 181  Q
    |||||||||||||    
T  64747 atttttcgtccta 64735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 205911 - 205738
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||||||||||   ||||| || |||||||||| ||||||||||  ||| |||  ||||||||| |||  | || |||||| ||| |||    
T  205911 cttaattacacttttagtcctcacattttgaccaactcacgaaaatggtcctgcctctttcaaatcgaacaaaaccgtccctaaactatcatgttt-ttg 205813  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     | |||| |||||||  || |||||   ||||||||||||||||||||| |||||||||||||||| ||||||||    
T  205812 cagttttagtcctacgtcctattttcaactccaaaaacgcagagaaatggcagttttagacctaccccctatgct 205738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 141; Significance: 5e-74; HSPs: 2)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 4752 - 4576
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||    
T  4752 ggcttaattacacttttggtcttcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcctttaattatcatttttgt 4653  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  4652 tgcatttttcgtcctaccccccattttattctccaaaaacacagagaaatgacagttttagacctaccccctatgct 4576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 105 - 226
Target Start/End: Original strand, 4242 - 4364
Alignment:
Q  105 cacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccatttt-attctccaaaa 203  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||| || ||||| |  ||| ||||    
T  4242 cacgaaactggtcctgcccttttaaaacaaaacaaaacggtccttcaattatcatttttgttgcatttttcgttctacctcctattttcaaactctaaaa 4341  T
Q  204 acgcagagaaatgacagttttag 226  Q
    | |||||||||||||||||||||    
T  4342 atgcagagaaatgacagttttag 4364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 141; Significance: 5e-74; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 12234329 - 12234505
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||| ||||||| | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12234329 ggcttaattacacttttggtcctcttgttttggcttattcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 12234428  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  12234429 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttaaacctaccccctatgct 12234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 11153695 - 11153516
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  11153695 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaacagaacaaaacgttccttcaattatcatttt 11153596  T
Q  163 tgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||    
T  11153595 tgttgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaataacagttttagacttaccccctatgct 11153516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 66 - 233
Target Start/End: Complemental strand, 25447781 - 25447614
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  25447781 ggcttaattacacttttggtcttcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtctttcaattatcatttttgt 25447682  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    || |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  25447681 tgcatttttcgtcctaccctccattttattctccaaaaacgcagagaaattacagttttagacctacc 25447614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 33109686 - 33109860
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||| |||| |||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  33109686 cttaattacatttttggtcctcgtgttttggcatactcacgaaactggtcctgctcttttaaaacagaacaaaacggtccttcaattatcatttttgttg 33109785  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  33109786 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccctctatgct 33109860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 46193948 - 46193774
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  46193948 cttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttattg 46193849  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||    
T  46193848 catttttcgtcctaccccccattttattctccaaaaacgtagagaattgacagttttagacctaccccctatgct 46193774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 66 - 243
Target Start/End: Complemental strand, 15523779 - 15523602
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||| ||||||||||  |||||||||||||||||||||||||||||||||| ||||||| |||| ||||| ||||||||||||    
T  15523779 ggcttaattacacttttggtcatcgtgttttgggctactcacgaaactggtcctgcccttttaaaacaaaacaaaatggtccttcaagtatcatttttgt 15523680  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgctt 243  Q
    || |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  15523679 tgcatttttcgtcctaccccccattttattctccaaaaacgcaaagaaatgacagttttagacctaccccctatgctt 15523602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 22434718 - 22434547
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||     
T  22434718 ttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaa-cagaacaaaacggtcattcaattatcatttttgttgc 22434620  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22434619 atttttcgtcctaccccc-attttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 22434547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 53 - 242
Target Start/End: Original strand, 25937657 - 25937846
Alignment:
Q  53 atcatatatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaa 152  Q
    ||||| ||| || |||||||||||| |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25937657 atcatttattttaggcttaattacatttttggtcctcgtgttttagcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaa 25937756  T
Q  153 ttatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||| |||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  25937757 ttatcatttttgttgcattttttgtcctgtcccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccatatgct 25937846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 22170481 - 22170306
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||| || ||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  22170481 ggcttaattacacttttggtcctcgtgttttgacctactgacgaaattg-tcctgcctttttaaaacaaaacaaaacggtcattcaattatcatttttgt 22170383  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  22170382 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacgtaccccctatgct 22170306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 23494445 - 23494619
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||    
T  23494445 cttaattacatttttggtcctcgtgttttggcctactcacgaaactagtcctgcccttttaaaacagaacaaagcggtccttcaattatcatttttattg 23494544  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  23494545 catttttcgtcctaccccccattttattctccaaacacgcagagaaatgacagttttagacctacctcatatgct 23494619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 68 - 242
Target Start/End: Complemental strand, 38962362 - 38962189
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||| |||| ||||||||||||||  ||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38962362 cttaattacatttttggtcctcgtgttttggtctattcacgaaactggtccggcccttttaaaacagaacaaaacggtccttcaattatcatttttgttg 38962263  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  38962262 catttttcgtcctaccccccattttattcttcaaaaacgcagagaaatgacagttttagacctacc-cctatgct 38962189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 4219559 - 4219733
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||| |||| |||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||| ||| ||||||||||||||||||||    
T  4219559 cttaattacatttttggtcctcgtgttttggcctactcacgaaactggtcctgccattttaaaataaaacaaaacagtccttcaattatcatttttgttg 4219658  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||    
T  4219659 catttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttaaacctatcccctatgct 4219733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 48526196 - 48526371
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| || ||||||||||| |||||||| ||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48526196 ggcttaattacacttttggttctcgtgttttgacctactcatgaaactggctctgcccttttaaaacagaacaaaacggtccttcaattatcatttttgt 48526295  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||    
T  48526296 tgcatttttcgtccta-cccccattttattctccaaaaatgcagagaaatgacagttttagatctaccccctatgct 48526371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 22434176 - 22434340
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  22434176 tttggcttaattacacttttggtcctcgtgttttggcatactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 22434275  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||    
T  22434276 tgttgtatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttag 22434340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 51020797 - 51020973
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  ||||| ||||||| |  | |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  51020797 ggcttaattacacttttgatcctcatgttttggctaattcactaaactggtcctgcccttttaaaacagaacaaaacgatccttcaattatcatttttgt 51020896  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  51020897 tgcatttttcgtcctaccccccattttattcttcaaaaacgtagagaaatgacagttttagacctaccccctatgct 51020973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 2118837 - 2118665
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||| |||||||||| ||| |||| ||||||||||||  |||||||||||| |||||||||||||||||||||||||||||||||     
T  2118837 ttaattacacttttggtcttcgtgttttggcctgctcatgaaactggtcctatccttttaaaacataacaaaacggtcattcaattatcatttttgttgc 2118738  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| ||||||||    
T  2118737 atttttcgtcctac-ccccattttattctccaaaaacgcagagaaataatagttttagacctaccccctatgct 2118665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 54995609 - 54995437
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| || ||||||||||||| |||||||||||||| ||||| ||||| ||||||||     
T  54995609 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaatagaacaaaacggtccttcaagtatca-ttttgttgc 54995511  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| |||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||||||    
T  54995510 atttttcgtcctaacccccattttattctctaaaaacgcaaagaaatgatagttttagacctaccacctatgct 54995437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 65 - 228
Target Start/End: Original strand, 46193404 - 46193568
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  46193404 tggcttaattacacttttggtcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaaaggtccttcaattatcatttttg 46193503  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagac 228  Q
    ||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||||||||||||    
T  46193504 ttgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgacagttttagac 46193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 25447246 - 25447408
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25447246 tggcttaattacacttttggtcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 25447345  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| ||||||||||||||| || ||||| |  ||||| |||||||||||||||||| ||||||    
T  25447346 ttgcatttttcgtcctacctcctattttcaaactccataaacgcagagaaatgacaattttag 25447408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 45082970 - 45082808
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| |||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||    
T  45082970 tggcttaattacacttttggtcctcgtgttttggcttactcacgaaactggtcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 45082871  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| ||||||||||||||| || ||||| |  ||| | |||||||||||||||||||||||||    
T  45082870 ttgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagttttag 45082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 20471056 - 20470895
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  20471056 ggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcattcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 20470957  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| |||||||||||||||| ||||||||    
T  20470956 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatgaaagttttag 20470895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 45082435 - 45082606
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||| ||||| ||| ||||||||||  ||||||||||| |||||  ||||||||||||| |||||||||||||| ||||||||||||||||||||     
T  45082435 ttaattacgcttttggtcatcgtgttttggtctactcacgaa-ctggttttgcccttttaaaatagaacaaaacggtccttcaattatcatttttgttgc 45082533  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  45082534 atttttcgtccta-cccccattttattctccaaaaacacagagaaatgacaattttagacctaccccctatgct 45082606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 66 - 225
Target Start/End: Original strand, 15523235 - 15523395
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |    
T  15523235 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattattattttttt 15523334  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    || ||||||||||||||| || ||||| |  ||| | ||||||||||||||||||||||||    
T  15523335 tgcatttttcgtcctacctcctattttcaaactctagaaacgcagagaaatgacagtttta 15523395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 23494995 - 23494872
Alignment:
Q  59 tatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca 158  Q
    |||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  23494995 tatgttaggcttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca 23494896  T
Q  159 tttttgttgtatttttcgtcctac 182  Q
    ||||||||| ||||||||||||||    
T  23494895 tttttgttgcatttttcgtcctac 23494872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 4220101 - 4219943
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||     
T  4220101 ttaattacacttttggtcctcgtgttttggcctactcacgaaactgatcctgctcttttaaaacagaacaaaatggtcattcaattatcatttttgttgc 4220002  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  || ||||||||||||||||| ||||||||||    
T  4220001 atttttcgtcctacctcctattttcaaacttcaaaaacgcagagaaataacagttttag 4219943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 12234875 - 12234713
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||| |||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||    
T  12234875 tggcttaattatacttttggtcctcgtgttttggcctactcacgaaactgatcatgcccttttaaaacagaacaaaacggtccttcaattatcatttttg 12234776  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| ||||||||||||||| || ||||| |  | ||| ||| |||||||||||||||||||||    
T  12234775 ttgcatttttcgtcctacctcctattttcaaaccccagaaatgcagagaaatgacagttttag 12234713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 48526723 - 48526565
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||| |||||| ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||||||     
T  48526723 ttaattatacttttggtcctcgtgttttggtctactcacgaaactggtcttgcccttttaaaacagaacaaaacggtccttcaattatcacttttgttgc 48526624  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||||| |||| ||||||||||||||||||||    
T  48526623 atttttcgtcctacctcctattttcaaactccataaacacagagaaatgacagttttag 48526565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 54995072 - 54995230
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||     
T  54995072 ttaattacacttttggtcctcgtgtattggcctactcacgaaactagtcctacccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 54995171  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||||||| || ||||| |  ||||| ||| | |||||||||||||||||||    
T  54995172 atttttcgtcctacctcctattttcaaactccagaaatgtagagaaatgacagttttag 54995230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 11153146 - 11153307
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| |||||| |||||||||||||| ||||||||| ||| ||||| ||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  11153146 ggcttaattatacttttggtcctcgtgttttggcctactcacaaaattggtcatgcccttttaaaatagaataaaacggtccttcaattatcatttttgt 11153245  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  | ||| |||||||||||||||||||||||||    
T  11153246 tgcatttttcgtcctacctcctattttcaaaccccagaaacgcagagaaatgacagttttag 11153307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 67 - 208
Target Start/End: Complemental strand, 20958403 - 20958264
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  20958403 gcttaattacacttttagtcctcgtattttggcctactcacgaaaatggtcctgcccttttaaaacagaacaaatatgtccttcaattatcatttttgtt 20958304  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    | |||||| |||||| |||||||||||| |||||||||||||    
T  20958303 gcattttt-gtccta-cccccattttatcctccaaaaacgca 20958264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 12503913 - 12503805
Alignment:
Q  134 gaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12503913 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 12503814  T
Q  234 acctatgct 242  Q
     ||||||||    
T  12503813 ccctatgct 12503805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 66 - 225
Target Start/End: Complemental strand, 25938216 - 25938056
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  25938216 ggcttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacagaacaaaacagtccttcaattatcatttttgt 25938117  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagtttta 225  Q
    || |||||| |||||||| || ||||| |  ||||| |||| || ||||||| ||||||||    
T  25938116 tgcattttttgtcctacctcctattttcaaactccagaaacacaaagaaatggcagtttta 25938056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 18751602 - 18751760
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| |||||||||||||| ||||||||  ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||     
T  18751602 ttaattacacttttggtcctcgtgttttggcctactcataaaactggtcatgcccttttaaaacagaacaaaacggtccttcaaatatcatttttgttgc 18751701  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||||||||||| ||| || ||||| |  ||||| ||||||||| ||||| |||||||||    
T  18751702 atttttcgtcccacctcctattttcaaactccagaaacgcagaaaaatggcagttttag 18751760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 33110009 - 33109883
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||| ||||||| ||| ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  33110009 ggcttaattacacttttggtcctcatgttttggcctgctcacgaaattggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttgt 33109910  T
Q  166 tgtatttttcgtcctaccccccatttt 192  Q
    || ||||||||||||||| || |||||    
T  33109909 tgcatttttcgtcctacctcctatttt 33109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 51021340 - 51021180
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||||||||||  ||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||| || |||||||| ||||||    
T  51021340 ggcttaattacacttttgatcctcgtgttttggcctactcacgaaattggtcctgcccttttaaaacacaacaaaacggtcctttaattatca-ttttgt 51021242  T
Q  166 tgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    || ||||||||||||||| || ||||| |  ||||| ||||||||||||||| || ||||||    
T  51021241 tgcatttttcgtcctacctcctattttcaaactccagaaacgcagagaaatggcaattttag 51021180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 18764063 - 18763951
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||| ||||||||||||||    
T  18764063 cttaattacacttttggtcctcgtgttttggcctactcacgaaactggtcatgtccttttaaaacagaacaaaatggtcattcaagtatcatttttgttg 18763964  T
Q  168 tatttttcgtcct 180  Q
     ||||||||||||    
T  18763963 catttttcgtcct 18763951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 44892692 - 44892552
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||| | |||| |||||||||||||| ||||||||||||| |||| ||||| ||||||||||||||||||| ||| |||||||||  ||||||||    
T  44892692 gcttaattatatttttggtcctcgtgttttgacctactcacgaaaatggttctgccattttaaaacagaacaaaactgtctttcaattatattttttgtt 44892593  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    | |||||||||||||||| ||||||||| ||||||||||||    
T  44892592 gcatttttcgtcctaccctccattttatcctccaaaaacgc 44892552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 2118295 - 2118454
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||||||||||||||| |||||||  ||| ||||||||||||||||||||    
T  2118295 cttaattacacttttggtccttgtgttttggcctactcacgaaattggtcctgcccttttaaaacataacaaaatagtccttcaattatcatttttgttg 2118394  T
Q  168 tatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     ||||||||||||||| || ||||| |  || || ||||||||||||||  |||||||||    
T  2118395 catttttcgtcctacctcctattttcaaacttcagaaacgcagagaaattgcagttttag 2118454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 208
Target Start/End: Complemental strand, 48713888 - 48713749
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||||||||| | ||||||||||  |||||||| |||| ||||| ||| |||||||||||||||||||  ||| ||||||||||||||||||||     
T  48713888 ttaattacacttttaattctcgtgttttagcctactcatgaaaatggtcatgctcttttaaaacagaacaaaattgtccttcaattatcatttttgttgc 48713789  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    |||||||||||| ||| ||||||||| |||||||||||||    
T  48713788 atttttcgtcctcccctccattttatcctccaaaaacgca 48713749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 183
Target Start/End: Complemental strand, 35363149 - 35363028
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgccctttt-aaaacagaacaaaacggtcattcaattatcattt 161  Q
    ||||||||||||||||||||  ||||||||||||| |||||||||||||||||| |||| ||||| |||| | |||||||||||||||||||||||||||    
T  35363149 tttggcttaattacacttttgatcctcgtgttttggcctactcacgaaactggttctgctcttttaaaaaaaaaacaaaacggtcattcaattatcattt 35363050  T
Q  162 ttgttgtatttttcgtcctacc 183  Q
    |||||| ||||||||| |||||    
T  35363049 ttgttgcatttttcgttctacc 35363028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 83 - 207
Target Start/End: Complemental strand, 43243808 - 43243685
Alignment:
Q  83 agtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctac 182  Q
    ||||||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||  ||  |||||||||||||||||||| |||||| |||||||    
T  43243808 agtcctcgtgttttggcctactcacgaaaatggtcatgcccttttaaaacagaacaaaattgttcttcaattatcatttttgttgcattttttgtcctac 43243709  T
Q  183 cccccattttattctccaaaaacgc 207  Q
     ||||||||||| ||||||||||||    
T  43243708 -ccccattttatcctccaaaaacgc 43243685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 64 - 207
Target Start/End: Complemental strand, 48295090 - 48294946
Alignment:
Q  64 ttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcattttt 163  Q
    |||||||||||||| |||| ||| ||||||||||  |||||||||||| ||||| ||||  ||||||||| |||||||  ||||||||||||||||||||    
T  48295090 ttggcttaattacatttttggtcatcgtgttttgatctactcacgaaattggtcttgcctctttaaaacacaacaaaattgtcattcaattatcattttt 48294991  T
Q  164 gttgtattttt-cgtcctaccccccattttattctccaaaaacgc 207  Q
    |||| |||||| ||||||||||||||||||||  |||||||||||    
T  48294990 gttgcatttttccgtcctaccccccattttatcttccaaaaacgc 48294946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 12503454 - 12503597
Alignment:
Q  84 gtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctacc 183  Q
    |||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||||    
T  12503454 gtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacc 12503553  T
Q  184 ccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     || ||||| |  ||||| |||||||||||||| ||||||||||    
T  12503554 tcctattttcaaactccagaaacgcagagaaattacagttttag 12503597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 66 - 207
Target Start/End: Original strand, 48293594 - 48293735
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||| || ||||| |  ||||||||| |||||||  ||  ||||||||||||||||||    
T  48293594 ggcttaattacacttttggtcctcgtgttttggcttactcacgaaattgatcctgtctctttaaaacaaaacaaaattgttcttcaattatcatttttgt 48293693  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    || ||||||| |||| ||| ||||||||||||||||||||||    
T  48293694 tgcatttttcatcctgccctccattttattctccaaaaacgc 48293735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 16690939 - 16691072
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||| |||| ||||| ||||||||  |||||||||||| ||||||||||  ||||||||| |||||||   || ||||||||||||||||||||     
T  16690939 ttaattacatttttggtccttgtgttttgatctactcacgaaaatggtcctgcctctttaaaacaaaacaaaattatccttcaattatcatttttgttgc 16691038  T
Q  169 atttttcgtcctaccccccattttattctccaaa 202  Q
    |||||||||||||||||| ||||||| |||||||    
T  16691039 atttttcgtcctacccccgattttatcctccaaa 16691072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 204
Target Start/End: Complemental strand, 43281318 - 43281198
Alignment:
Q  83 agtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctac 182  Q
    ||||||||||||||| ||||||||||||| ||||| |||| ||||||||||||||||||  ||  ||||||||| |||||||||| ||||||||||||||    
T  43281318 agtcctcgtgttttggcctactcacgaaaatggtcatgccattttaaaacagaacaaaaatgttcttcaattat-atttttgttgcatttttcgtcctac 43281220  T
Q  183 cccccattttattctccaaaaa 204  Q
    |||||||||||| ||| |||||    
T  43281219 cccccattttatcctcaaaaaa 43281198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 67 - 207
Target Start/End: Original strand, 44890518 - 44890658
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||||| |||| ||||| |||||||| |||| |||||||| ||||| |||||||||||||||||||||||   || || ||||||  ||||||||    
T  44890518 gcttaattacaattttggtccttgtgttttgacctattcacgaaaatggtcatgcccttttaaaacagaacaaaaatatcctttaattatattttttgtt 44890617  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    | ||||||| || ||||||||||||||| ||| ||||||||    
T  44890618 gcatttttcatcataccccccattttatcctcaaaaaacgc 44890658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 202
Target Start/End: Original strand, 48708295 - 48708431
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||  |||||||| ||||  ||||||| || |||||||||||||||||| |||||||| ||| ||||||||||||||||||    
T  48708295 ggcttaattacacttttggtccatgtgttttggcctaaccacgaaaatgatcctgcccttttaaaacacaacaaaactgtccttcaattatcatttttgt 48708394  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaa 202  Q
    || |||| |  ||||||| | |||||||| |||||||    
T  48708395 tgcatttataatcctaccactcattttatcctccaaa 48708431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 66 - 192
Target Start/End: Complemental strand, 10258432 - 10258306
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| ||||||||||| || |||||||| |||| |||||||||||||||||||||||  ||||  ||  ||||||||||||||||||    
T  10258432 ggcttaattacacttttggtcctcgtgttgtggcctactcaggaaattggtcctgcccttttaaaacagattaaaattgtttttcaattatcatttttgt 10258333  T
Q  166 tgtatttttcgtcctaccccccatttt 192  Q
    || | |||| ||| ||||||| |||||    
T  10258332 tgcagttttagtcttaccccctatttt 10258306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 59 - 202
Target Start/End: Complemental strand, 16691623 - 16691481
Alignment:
Q  59 tatgtttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatca 158  Q
    |||| |||||||||||||||||||  |||  |||||||| ||||||||||||| |||||||| ||| || ||||| |||||||  ||| || |||||| |    
T  16691623 tatgattggcttaattacacttttgatccctgtgttttgacctactcacgaaaatggtcctg-cctctttaaacataacaaaattgtcctttaattatta 16691525  T
Q  159 tttttgttgtatttttcgtcctaccccccattttattctccaaa 202  Q
    ||||||||| |||||||||| |||| |||||||||| |||||||    
T  16691524 tttttgttgcatttttcgtcatacctcccattttatcctccaaa 16691481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 204
Target Start/End: Original strand, 20957196 - 20957327
Alignment:
Q  73 ttacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtattt 172  Q
    ||||| |||| ||||||| |||||| | ||||||||||| ||||| | | ||||||||||| |||||||  ||| ||||||||||| |||||||| ||||    
T  20957196 ttacatttttggtcctcgagttttggcttactcacgaaaatggtcatactcttttaaaacacaacaaaattgtccttcaattatcaattttgttgcattt 20957295  T
Q  173 ttcgtcctaccccccattttattctccaaaaa 204  Q
    |||||| ||| ||||||||||||||| |||||    
T  20957296 ttcgtcatactccccattttattctcaaaaaa 20957327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 124 - 207
Target Start/End: Original strand, 43242328 - 43242411
Alignment:
Q  124 ttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| || |||||||  |||||||||||    
T  43242328 ttttaaaacagaacaaaacggtcattcaattatcattttttttgcatttttcgtcctacctccaattttatcatccaaaaacgc 43242411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 16318321 - 16318251
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaa 136  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||| |||||||||||||||||||||    
T  16318321 ggcttaattacacttttggtcctcgtgttttggcctactcacaaaactgatcctgcccttttaaaacagaa 16318251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 175 - 242
Target Start/End: Complemental strand, 18752038 - 18751971
Alignment:
Q  175 cgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  18752038 cgtcctaccccctattttattctccaaaaatgcagagaaataacagttttagacctaccccctatgct 18751971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 242
Target Start/End: Original strand, 17503974 - 17504149
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| ||| || |||||||  ||||| ||  ||||||||| ||||||||||  ||| |||  ||||| ||| ||| |  || |||||| ||| |    
T  17503974 ggcttaattatactgttggtcctcgcattttgaccatctcacgaaaatggtcctgcctctttcaaatggaacataaccgtccta-aactatcatgttttt 17504072  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || | |||| |||||||| || |||||   ||||| ||||| |||||||||||||||||||||||||| ||||||||    
T  17504073 tgcagttttagtcctacctcctattttcaactccagaaacgtagagaaatgacagttttagacctaccccctatgct 17504149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 44220861 - 44220781
Alignment:
Q  127 taaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||||||||||||  ||| |||| ||||||||||||||  ||||||||| |||||||  ||||||| ||||||||||||    
T  44220861 taaaacagaacaaaattgtccttcatttatcatttttgtttcatttttcgttctacccctaattttatcctccaaaaacgc 44220781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 164
Target Start/End: Original strand, 55189527 - 55189626
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    ||||||||||| | ||||  ||||||||||||| |||| |||  ||| ||||  ||||||||||||| |||||||||  ||| |||||||||||||||||    
T  55189527 tggcttaattatatttttgatcctcgtgttttgacctattcataaaaatggttatgcccttttaaaatagaacaaaattgtctttcaattatcatttttg 55189626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 17504369 - 17504329
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  17504369 aaacgcagagaaatgacagttttagacctaccccctatgct 17504329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 35193443 - 35193483
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  35193443 aaacgcagagaaatgacagttttagacctaccccctatgct 35193483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 207
Target Start/End: Complemental strand, 30598068 - 30597925
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctg-cccttttaaaacagaacaaaacggtcattcaattatcattt 161  Q
    |||||||| ||||||||||| |||||||||||||| || ||||||| || |||| ||| | |||||||| | ||||||||  |||  | |||||| ||||    
T  30598068 tttggcttgattacacttttggtcctcgtgttttgaccaactcacggaattggttctgtctcttttaaatc-gaacaaaatcgtccctaaattat-attt 30597971  T
Q  162 ttgttgtatttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||| | |||| |||||| |||| ||||||   |||||||||||    
T  30597970 ttgttgcacttttggtcctaacccctattttaacatccaaaaacgc 30597925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 199 - 242
Target Start/End: Original strand, 41608508 - 41608551
Alignment:
Q  199 caaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||| ||||||||||||||||| || ||||||||||||    
T  41608508 caaaaacgcacagaaatgacagttttagtccaaccacctatgct 41608551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 14439958 - 14440004
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  14439958 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 14440004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 34789798 - 34789752
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||| | ||||||||||||||| || ||||||||||||    
T  34789798 ctccaaaaacgcacataaatgacagttttagtccaaccacctatgct 34789752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Original strand, 35643697 - 35643743
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  35643697 ctccataaacgcacagaaatgacagttttagtccaaccacctatgct 35643743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 242
Target Start/End: Complemental strand, 46737071 - 46737025
Alignment:
Q  196 ctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| ||||||| ||||||||||||||||| || ||||||||||||    
T  46737071 ctccagaaacgcacagaaatgacagttttagtccaaccacctatgct 46737025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 40160236 - 40160269
Alignment:
Q  209 gagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||||||||||||||||||||| ||||||||    
T  40160236 gagaaatgacagttttagacctaccccctatgct 40160269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 55677504 - 55677451
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcct 119  Q
    ||||||||||||||||| ||||| || ||||| || |||||||||| |||||||    
T  55677504 ggcttaattacacttttggtccttgtattttgaccaactcacgaaattggtcct 55677451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 14440238 - 14440198
Alignment:
Q  202 aaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||||| ||||||||||||||||| || ||||||||||||    
T  14440238 aaacgcacagaaatgacagttttagtccaaccacctatgct 14440198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 134218 - 134042
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||| ||| ||||||||||| ||||||||||||| || |||||||| |||||||||    
T  134218 ggcttaattacacttttggtcctcgtgttttggcctactcacgaaactagtcatgcccttttaatacagaacaaaacgatccttcaattaacatttttgt 134119  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  134118 tgcatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 134042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223 (Bit Score: 127; Significance: 1e-65; HSPs: 2)
Name: scaffold1223
Description:

Target: scaffold1223; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 68 - 242
Target Start/End: Original strand, 755 - 928
Alignment:
Q  68 cttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    ||||||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  755 cttaattacacttttggtcttcgtgttttggcctactcacgatactggtcctgcccttttaaaacagaacaaaacggtccttcaattatca-ttttgttg 853  T
Q  168 tatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||    
T  854 catttttcgtcctaccccccattttattctccaaaaacgcagagaaataacagttttagacataccccttatgct 928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1223; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 63 - 242
Target Start/End: Complemental strand, 1289 - 1110
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  1289 tttggcttaattacacttttagtcctcgtgttttggcttactcacgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 1190  T
Q  163 tgttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    ||||| || |||||||||||| || ||||| |  | ||| ||||||||| ||||| |||||||||||| ||| ||||||||    
T  1189 tgttgcatctttcgtcctacctcctattttcaaaccccagaaacgcagaaaaatggcagttttagacccacc-cctatgct 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 242
Target Start/End: Complemental strand, 10414 - 10242
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||  | |||||||||||||||||||||||||| ||||||||||||||||||||     
T  10414 ttaattacacttttggtcctcgtgttttggtctactcacgaaactggtgtttcccttttaaaacagaacaaaacggtccttcaattatcatttttgttgc 10315  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||||||||||| |||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||    
T  10314 atttttcgtcctac-ccccattttattctccaaaaattcagagaaatgacagttttaaacctaccccctatgct 10242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0432; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 9935 - 10032
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||| |||| |||||||||||||  |||| ||||||||||| || ||||||||||| | ||||||||| |||| ||||||||||| |||||||    
T  9935 ttaattacatttttggtcctcgtgttttagcctattcacgaaactgatcttgcccttttaagatagaacaaaatggtccttcaattatcaattttgtt 10032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 85 - 242
Target Start/End: Original strand, 10640 - 10797
Alignment:
Q  85 tcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccc 184  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |||| ||||||||||||||||    
T  10640 tcctcgtgttttggcctactcatgaaactggtcctgcccttttaaaacagaacaaaacggtccttcaagtatcattttcgttgcatttttcgtcctaccc 10739  T
Q  185 cccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
     ||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||    
T  10740 tccattttattctccaaaaatgcagagaaatgacagttttagacgtaccccctatgct 10797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 11169 - 11007
Alignment:
Q  65 tggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttg 164  Q
    |||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  11169 tggcttaattacacttttggtcctcgtgttttggcctacttacgaaactggtcctgcccttttaaaacataacaaaacggtccttcaattatcatttttg 11070  T
Q  165 ttgtatttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
    ||| ||||||||||||||| || ||||| |  ||| | ||||||||||||||  |||||||||    
T  11069 ttgcatttttcgtcctacctcctattttcaaactcgagaaacgcagagaaattgcagttttag 11007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 118; Significance: 3e-60; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 66 - 242
Target Start/End: Complemental strand, 42703 - 42528
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    |||||||||| |||||| | ||||||||||||  ||||||| ||||||| | ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  42703 ggcttaattatacttttggncctcgtgttttggtctactcaggaaactgattctgcccttttaaaacagaacaaaacggtccttcagttatcatttttgt 42604  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42603 ttcatttttcgtcctac-ccccattttattctccaaaaacgcagagaaatgacagttttagacctaccccctatgct 42528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 69 - 242
Target Start/End: Original strand, 42172 - 42345
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||||||||||| |||||||||||  ||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  42172 ttaattacacttttagttctcgtgttttggtctaatcacgaaactgatcctgccattttaaaacagaacaaaacggtcattcaattatcatttttgttgc 42271  T
Q  169 atttttcgtcctaccccccatttt-attctccaaaaacgcagagaaatgacagttttagacctaccacctatgct 242  Q
    |||||| ||| |||| || ||||| |  || || |||||||||||||||||||||||||||||||| ||||||||    
T  42272 attttttgtcatacctcctattttcaaacttcagaaacgcagagaaatgacagttttagacctacc-cctatgct 42345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 108; Significance: 2e-54; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 66 - 233
Target Start/End: Original strand, 18835 - 19001
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgt 165  Q
    ||||| ||||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||||    
T  18835 ggcttcattacacttttggtccttctgttttggcctactcacgaaactggtcttgcccttttaaaacataacaaaacggtgcttcaattatcatttttgt 18934  T
Q  166 tgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    || ||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  18935 tgcatttttcatccta-cccccattttattctccaaaaacgcagagaaataacagttttagacttacc 19001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 19169 - 19069
Alignment:
Q  63 tttggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttt 162  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  19169 tttggcttaattacacttttggtcctcgtgttttggcctactcacgaaacttgtcctgcccttttaaaacagaacaaaacggtccttcaattatcatttt 19070  T
Q  163 t 163  Q
    |    
T  19069 t 19069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 70 - 192
Target Start/End: Complemental strand, 28784 - 28662
Alignment:
Q  70 taattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgta 169  Q
    ||||||||||||| ||| |||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  28784 taattacacttttggtcatcgtgttttggcctacttacgaaactggtcatgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgca 28685  T
Q  170 tttttcgtcctaccccccatttt 192  Q
     |||||||||| |||||||||||    
T  28684 gttttcgtccttccccccatttt 28662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1585 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1585
Description:

Target: scaffold1585; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 67 - 208
Target Start/End: Original strand, 568 - 709
Alignment:
Q  67 gcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgtt 166  Q
    ||||||||||||||||  ||||||||||||| ||||||||||||| || || |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  568 gcttaattacacttttgatcctcgtgttttggcctactcacgaaaatgatcatgcccttttaaaacagaacaaaactgtccttcaattatcatttttgtt 667  T
Q  167 gtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    ||||||||||||  ||| ||||||| || |||||||||||||    
T  668 gtatttttcgtctcacctcccatttgatcctccaaaaacgca 709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 134 - 242
Target Start/End: Original strand, 16564 - 16672
Alignment:
Q  134 gaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 233  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16564 gaacaaaacggtccttcaagtatcatttttgttgcatttttcgtcataccccccattttattctccaaaaacgcagagaaatgacagttttagacctacc 16663  T
Q  234 acctatgct 242  Q
     ||||||||    
T  16664 ccctatgct 16672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 17023 - 16880
Alignment:
Q  84 gtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctacc 183  Q
    |||||||||||||| | |||||||||||||| ||| ||| ||||||||||||||||||  ||| |||||||||||||||||||| |||||||||||||||    
T  17023 gtcctcgtgttttgacttactcacgaaactgatcccgccattttaaaacagaacaaaattgtccttcaattatcatttttgttgcatttttcgtcctacc 16924  T
Q  184 ccccatttt-attctccaaaaacgcagagaaatgacagttttag 226  Q
     || ||||| |  ||||| |||||||||||||| ||||||||||    
T  16923 tcctattttcaaactccagaaacgcagagaaattacagttttag 16880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 62000 - 61862
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgt 168  Q
    ||||||||||||||  |||||||||||||  |||||||||||| ||||||| ||||||||||| |||||||||   |||||||| ||||||||||||| |    
T  62000 ttaattacacttttgatcctcgtgttttggtctactcacgaaaatggtcctacccttttaaaatagaacaaaatcatcattcaaatatcatttttgttat 61901  T
Q  169 atttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||||||||||||||||||||| | ||||||||||||    
T  61900 atttttcgtcctaccccccattttgtcctccaaaaacgc 61862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 66 - 140
Target Start/End: Original strand, 61028 - 61102
Alignment:
Q  66 ggcttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaa 140  Q
    ||||||| |||||||||  ||||||||||||| ||||||||||||| || ||||||| |||||||| ||||||||    
T  61028 ggcttaagtacacttttgatcctcgtgttttggcctactcacgaaaatgatcctgccattttaaaatagaacaaa 61102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 7784 - 7691
Alignment:
Q  115 gtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgtatttttcgtcctaccccccattttattctccaaaaacgca 208  Q
    ||||| |||||||||||||||||||||| ||| |||| ||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||    
T  7784 gtccttcccttttaaaacagaacaaaactgtcgttcagttatcatttttgttgcatttttcgtcctaccccctattttatcctccaaaaacgca 7691  T

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Target: scaffold0076 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 8551 - 8453
Alignment:
Q  69 ttaattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttg 167  Q
    |||||||||||||| ||| || |||||||  ||||| |||||||||||||| ||||||||||||| | |||||||||| ||||||||||||||||||||    
T  8551 ttaattacacttttggtcttcatgttttggtctacttacgaaactggtcctacccttttaaaacacagcaaaacggtccttcaattatcatttttgttg 8453  T

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Target: scaffold1696 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1696
Description:

Target: scaffold1696; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 70 - 207
Target Start/End: Original strand, 454 - 589
Alignment:
Q  70 taattacacttttagtcctcgtgttttgtcctactcacgaaactggtcctgcccttttaaaacagaacaaaacggtcattcaattatcatttttgttgta 169  Q
    |||||||| |||| ||| |||||||||| ||||||||||||| ||||| ||  ||||||||||| |||| ||  ||| |||||||||||||||||||| |    
T  454 taattaca-ttttggtcttcgtgttttggcctactcacgaaaatggtcatgatcttttaaaacaaaacataatcgtccttcaattatcatttttgttgca 552  T
Q  170 tttttcgtcctaccccccattttattctccaaaaacgc 207  Q
    |||||||||||| | |||||||||| ||| ||||||||    
T  553 tttttcgtccta-cacccattttatcctcaaaaaacgc 589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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