View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4264_low_6 (Length: 298)

Name: NF4264_low_6
Description: NF4264
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4264_low_6
NF4264_low_6
[»] chr6 (21 HSPs)
chr6 (1-282)||(27589037-27589318)
chr6 (122-249)||(26806924-26807051)
chr6 (147-225)||(27419716-27419794)
chr6 (153-216)||(27507203-27507266)
chr6 (147-216)||(27714447-27714516)
chr6 (147-216)||(26627533-26627602)
chr6 (147-216)||(26733510-26733579)
chr6 (147-220)||(31288403-31288476)
chr6 (147-209)||(26852714-26852776)
chr6 (149-250)||(27368178-27368279)
chr6 (149-250)||(27458525-27458626)
chr6 (21-120)||(26856549-26856648)
chr6 (161-212)||(27423389-27423440)
chr6 (171-223)||(26889614-26889666)
chr6 (19-79)||(26889801-26889861)
chr6 (21-93)||(27424315-27424386)
chr6 (172-216)||(27424493-27424537)
chr6 (147-225)||(26060250-26060326)
chr6 (147-225)||(26080220-26080296)
chr6 (20-91)||(27660776-27660847)
chr6 (57-93)||(27507086-27507122)
[»] scaffold0003 (4 HSPs)
scaffold0003 (147-225)||(67569-67647)
scaffold0003 (161-212)||(63923-63974)
scaffold0003 (172-216)||(62826-62870)
scaffold0003 (21-93)||(62977-63048)
[»] scaffold0349 (1 HSPs)
scaffold0349 (147-216)||(17428-17497)
[»] chr1 (1 HSPs)
chr1 (163-216)||(26140939-26140992)
[»] chr4 (8 HSPs)
chr4 (171-225)||(5082178-5082232)
chr4 (176-215)||(18675270-18675309)
chr4 (176-215)||(18719800-18719839)
chr4 (20-82)||(5082383-5082445)
chr4 (181-216)||(18077018-18077053)
chr4 (179-215)||(18651192-18651228)
chr4 (179-215)||(18693366-18693402)
chr4 (179-215)||(18727237-18727273)


Alignment Details
Target: chr6 (Bit Score: 278; Significance: 1e-155; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 27589037 - 27589318
Alignment:
Q  1 cattcttttaggatctgttgcaatttattagacattgtgtgaaagttgctaaactccactacaccttttaaaaattctggaccaaagggattcagctgaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27589037 cattcttttaggatctgttgcaatttattagacattgtgtgaaagttgccaaactccactacaccttttaaaaattctggaccaaagggattcagctgaa 27589136  T
Q  101 ggctgtgagagatggattccaagcatccttatgtgacagctacgtattctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaata 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27589137 ggctgtgagagatggattccaagcatccttatgtgacagctacgtattctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaata 27589236  T
Q  201 tacagttatgctgcaatagaaaagactcacgttgattacccgacaaaatgttttatattcaagcatttagctcaatgtaaac 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27589237 tacagttatgctgcaatagaaaagactcacgttgattacccgacaaaatgttttatattcaagcatttagctcaatgtaaac 27589318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 26807051 - 26806924
Alignment:
Q  122 agcatccttatgtgacagctacgtattctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaa 221  Q
    ||||||||||||||| ||| ||| |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| |||||||  |||||||    
T  26807051 agcatccttatgtgatagcaacggattctcctttctgcaggtcaaaagaattcaaatacatgtgataagtaacacaatatacatttatgcttgaatagaa 26806952  T
Q  222 aagactcacgttgattacccgacaaaat 249  Q
    |  || ||| ||||||||||||||||||    
T  26806951 acaacccacattgattacccgacaaaat 26806924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 225
Target Start/End: Original strand, 27419716 - 27419794
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaaga 225  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  27419716 ttctccattctgcaagtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaacagagaaga 27419794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 27507203 - 27507266
Alignment:
Q  153 tttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  27507203 tttctgcaggtcacatgcattcaaatagatgtgataagtaacacaatatacagttatgctgcaa 27507266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 27714447 - 27714516
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  27714447 ttctcctttctgcagggcacaagcattcaagtagatgtgataagtaacataatatacagttatgctgcaa 27714516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 26627602 - 26627533
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  26627602 ttctcctttctgcagggcacaagcattcaagtagatgtgataagtaacataatatacaattatgctgcaa 26627533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 26733579 - 26733510
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  26733579 ttctcctttctgcagggcacaagcattcaagtagatgtgataagtaacataatatacaattatgctgcaa 26733510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 31288476 - 31288403
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaataga 220  Q
    ||||||| |||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  31288476 ttctcctgtctgcaagtcagaagcattcaaatagatatgataagtaacacaatatacagttatgctgctataga 31288403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 26852776 - 26852714
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttat 209  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||    
T  26852776 ttctcctttctgcaggacacaagcattcaaatagatgtggtaagtaacataatatacagttat 26852714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 27368178 - 27368279
Alignment:
Q  149 ctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaagactcacgttgattacccgacaaaa 248  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| ||| |||| |    |||||||| ||||||||    
T  27368178 ctcctttctgcaagacacaagcattcaaatagatatgataagtaacacaatatacagttacgctccaacagagaagattgctattgattactcgacaaaa 27368277  T
Q  249 tg 250  Q
    ||    
T  27368278 tg 27368279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 27458525 - 27458626
Alignment:
Q  149 ctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaagactcacgttgattacccgacaaaa 248  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||| ||| ||| |||| |    |||||||| ||||||||    
T  27458525 ctcctttctgcaagacacaagcattcaaatagatatgataagtaacacaatatacagttacgctccaacagagaagattgctattgattactcgacaaaa 27458624  T
Q  249 tg 250  Q
    ||    
T  27458625 tg 27458626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 120
Target Start/End: Complemental strand, 26856648 - 26856549
Alignment:
Q  21 caatttattagacattgtgtgaaagttgctaaactccactacaccttttaaaaattctggaccaaagggattcagctgaaggctgtgagagatggattcc 120  Q
    ||||||||||||| |||||||||| | |  || || |||||||||||||| || || ||||||||||||||||||||| || | |||||||||| |||||    
T  26856648 caatttattagacgttgtgtgaaaatggtcaaccttcactacaccttttagaagttatggaccaaagggattcagctggagaccgtgagagatgaattcc 26856549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 27423389 - 27423440
Alignment:
Q  161 ggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgct 212  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  27423389 ggtcacatgcattcaaatagatttgataagtaacataatatacagttatgct 27423440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 26889666 - 26889614
Alignment:
Q  171 attcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaa 223  Q
    |||||||||||||||||||||| ||||||||| ||||| | ||||||||||||    
T  26889666 attcaaatagatgtgataagtagcacaatatatagttacgttgcaatagaaaa 26889614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 26889861 - 26889801
Alignment:
Q  19 tgcaatttattagacattgtgtgaaagttgctaaactccactacaccttttaaaaattctg 79  Q
    ||||||||||||||| |||||||||||| || || ||||||||||||||||| || |||||    
T  26889861 tgcaatttattagactttgtgtgaaagtggccaatctccactacaccttttagaagttctg 26889801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 27424315 - 27424386
Alignment:
Q  21 caatttattagacattgtgtgaaagttgctaaactccactacaccttttaaaaattctggaccaaagggattc 93  Q
    |||||||| |||| ||||||||||||| | |  ||||||||||||| |||||| |||||||||||||||||||    
T  27424315 caatttataagaccttgtgtgaaagtttccag-ctccactacacctattaaaagttctggaccaaagggattc 27424386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 27424493 - 27424537
Alignment:
Q  172 ttcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  27424493 ttcaaacagatgtgataagtaacacaatatagagttatgctgcaa 27424537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 26060326 - 26060250
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaaga 225  Q
    ||||||| |||| |||| |||||||||||||||||||||||  ||||||||  ||| ||||||||||||| ||| ||||    
T  26060326 ttctcctctctgaaggtaacaagcattcaaatagatgtgatgggtaacaca--atagagttatgctgcaacagataaga 26060250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 26080296 - 26080220
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaaga 225  Q
    ||||||| |||| |||| |||||||||||||||||||||||  ||||||||  ||| ||||||||||||| ||| ||||    
T  26080296 ttctcctctctgaaggtaacaagcattcaaatagatgtgatgggtaacaca--atagagttatgctgcaacagataaga 26080220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 27660776 - 27660847
Alignment:
Q  20 gcaatttattagacattgtgtgaaagttgctaaactccactacaccttttaaaaattctggaccaaagggat 91  Q
    ||||||||||||| |||||| |||||| || || |||||| ||||||||||||| ||||||||  |||||||    
T  27660776 gcaatttattagatattgtgagaaagtggccaacctccaccacaccttttaaaagttctggactgaagggat 27660847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 27507086 - 27507122
Alignment:
Q  57 cactacaccttttaaaaattctggaccaaagggattc 93  Q
    ||||||||||||||||| |||||||||||||||||||    
T  27507086 cactacaccttttaaaagttctggaccaaagggattc 27507122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 225
Target Start/End: Complemental strand, 67647 - 67569
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaaga 225  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  67647 ttctccattctgcaagtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaacagagaaga 67569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 212
Target Start/End: Complemental strand, 63974 - 63923
Alignment:
Q  161 ggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgct 212  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||||||||||    
T  63974 ggtcacatgcattcaaatagatttgataagtaacataatatacagttatgct 63923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 62870 - 62826
Alignment:
Q  172 ttcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||| |||||||||||||||||||||||| |||||||||||||    
T  62870 ttcaaacagatgtgataagtaacacaatatagagttatgctgcaa 62826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 63048 - 62977
Alignment:
Q  21 caatttattagacattgtgtgaaagttgctaaactccactacaccttttaaaaattctggaccaaagggattc 93  Q
    |||||||| |||| ||||||||||||| | |  ||||||||||||| |||||| |||||||||||||||||||    
T  63048 caatttataagaccttgtgtgaaagtttccag-ctccactacacctattaaaagttctggaccaaagggattc 62977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 17497 - 17428
Alignment:
Q  147 ttctcctttctgcaggtcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  17497 ttctcctttctgcagggcacaagcattcaagtagatgtgataagtaacataatatacagttatgctgcaa 17428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 163 - 216
Target Start/End: Complemental strand, 26140992 - 26140939
Alignment:
Q  163 tcacaagcattcaaatagatgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26140992 tcacaagcattcaaatagatgtgataagtaacacaatatacagttacgctgcaa 26140939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 171 - 225
Target Start/End: Complemental strand, 5082232 - 5082178
Alignment:
Q  171 attcaaatagatgtgataagtaacacaatatacagttatgctgcaatagaaaaga 225  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||| ||||    
T  5082232 attcaaattgatgtgataagtaacacagtatacagttatgctgcaacagagaaga 5082178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 18675270 - 18675309
Alignment:
Q  176 aatagatgtgataagtaacacaatatacagttatgctgca 215  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  18675270 aatagatgtgataagtaacacgatatacagttatgctgca 18675309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 176 - 215
Target Start/End: Original strand, 18719800 - 18719839
Alignment:
Q  176 aatagatgtgataagtaacacaatatacagttatgctgca 215  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  18719800 aatagatgtgataagtaacacgatatacagttatgctgca 18719839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 82
Target Start/End: Complemental strand, 5082445 - 5082383
Alignment:
Q  20 gcaatttattagacattgtgtgaaagttgctaaactccactacaccttttaaaaattctggac 82  Q
    |||||||||||||| ||||||| |||| || ||  ||||||||||||||||||| ||||||||    
T  5082445 gcaatttattagacgttgtgtggaagtggccaacttccactacaccttttaaaagttctggac 5082383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 216
Target Start/End: Complemental strand, 18077053 - 18077018
Alignment:
Q  181 atgtgataagtaacacaatatacagttatgctgcaa 216  Q
    |||||||||||||||||||||| |||||||||||||    
T  18077053 atgtgataagtaacacaatatagagttatgctgcaa 18077018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 18651192 - 18651228
Alignment:
Q  179 agatgtgataagtaacacaatatacagttatgctgca 215  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  18651192 agatgtgataactaacacaatatacatttatgctgca 18651228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 18693366 - 18693402
Alignment:
Q  179 agatgtgataagtaacacaatatacagttatgctgca 215  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  18693366 agatgtgataactaacacaatatacatttatgctgca 18693402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 18727237 - 18727273
Alignment:
Q  179 agatgtgataagtaacacaatatacagttatgctgca 215  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  18727237 agatgtgataactaacacaatatacatttatgctgca 18727273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University