View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4265-Insertion-12 (Length: 80)
Name: NF4265-Insertion-12
Description: NF4265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4265-Insertion-12 |
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Alignment Details
Target: chr8 (Bit Score: 71; Significance: 8e-33; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 71; E-Value: 8e-33
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 7962341 - 7962263
Alignment:
| Q |
1 |
aggagtaaacaagtaatcgccctcatccgactctcagagaccattaataggaaaatcattggacaagagttcattgaca |
79 |
Q |
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| T |
7962341 |
aggagtaaagaagtaatcgccctcatccgactctcaaagaccattaataggaaaatcattggacaagagttcattgaca |
7962263 |
T |
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Target: chr4 (Bit Score: 41; Significance: 0.000000000000006; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 47292991 - 47293055
Alignment:
| Q |
11 |
aagtaatcgccctcatccgactctcagagaccattaataggaaaatcattggacaagagttcatt |
75 |
Q |
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| T |
47292991 |
aagtaatcgccgtcatccgagtctcagggaccatcgataggaaaatcattgcacaagagttcatt |
47293055 |
T |
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