View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4265_high_1 (Length: 555)

Name: NF4265_high_1
Description: NF4265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4265_high_1
NF4265_high_1
[»] chr6 (17 HSPs)
chr6 (21-555)||(2885198-2885732)
chr6 (21-555)||(2860629-2861166)
chr6 (21-555)||(2866008-2866545)
chr6 (21-208)||(2910044-2910231)
chr6 (21-208)||(2842113-2842300)
chr6 (24-208)||(2833323-2833507)
chr6 (21-187)||(14577872-14578038)
chr6 (256-362)||(2841947-2842053)
chr6 (24-148)||(2828815-2828939)
chr6 (234-518)||(2910271-2910558)
chr6 (417-525)||(2833731-2833839)
chr6 (413-525)||(2841781-2841893)
chr6 (240-362)||(2833551-2833673)
chr6 (234-352)||(2828594-2828712)
chr6 (272-349)||(14577701-14577778)
chr6 (422-518)||(2828448-2828544)
chr6 (422-534)||(14577537-14577649)
[»] chr7 (1 HSPs)
chr7 (24-97)||(1800792-1800865)
[»] chr5 (1 HSPs)
chr5 (25-88)||(8043817-8043880)
[»] chr4 (1 HSPs)
chr4 (25-77)||(53395497-53395549)


Alignment Details
Target: chr6 (Bit Score: 499; Significance: 0; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 499; E-Value: 0
Query Start/End: Original strand, 21 - 555
Target Start/End: Original strand, 2885198 - 2885732
Alignment:
Q  21 atggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 120  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2885198 atggtagatttcccagttcctggtggaccataaagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 2885297  T
Q  121 taagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgcgcaaaatttgtgtgactccatcctgagatcca 220  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || |||||    
T  2885298 caagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgtgcaaaatttgtgtgactccaccccgacatcca 2885397  T
Q  221 ccaacaaccgctattgttggtgtaaagctttagtcgcctattcttaaatataatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatg 320  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2885398 ccaacaaccaccattgttggtgtaaagctttagtcgcctattcttaaatataatagcctttccttgttccaacacatgttgtatgtaagaggaagtaatg 2885497  T
Q  321 agatcgcgatgccttttgtggaaagttagggtgaagcatcttaccacatcgaaagatcttcctgaagatgcttttcttcttggagctttgctatttgcag 420  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2885498 agatcgcgatgccttttgtggaaagttagggtgaagcatcttaccacatcgaaagatcttcctgaagatgcttttcttcttggagctttgctatttgcag 2885597  T
Q  421 accaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcggcttc 520  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2885598 accaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcggcttc 2885697  T
Q  521 aagtcgtttggctcgtttactcgagttcgcaccaa 555  Q
    |||||||||||||||||||||||||||||||||||    
T  2885698 aagtcgtttggctcgtttactcgagttcgcaccaa 2885732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 440; E-Value: 0
Query Start/End: Original strand, 21 - 555
Target Start/End: Original strand, 2860629 - 2861166
Alignment:
Q  21 atggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 120  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2860629 atggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 2860728  T
Q  121 taagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgcgcaaaatttgtgtgactccatcctgagatcca 220  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||    
T  2860729 caagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgtgcaaaatttgtgtgactccaccctgacatcca 2860828  T
Q  221 ccaacaaccgctattgttggtgtaaagctttagtcgcctattcttaaatataatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatg 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2860829 ccaacaaccgctattgttggtgtaaagctttagtcgcctattcttaaatataatagcctttccttgttccaacacatgttgtatgtaagaggaagtaatg 2860928  T
Q  321 agatcgcgatgccttttgtggaaagttagggtgaagcatcttaccacatcgaa---agatcttcctgaagatgcttttcttcttggagctttgctatttg 417  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||   || |||||||||||||||||||||| ||||||||||||| ||||    
T  2860929 agatcgcgatgccttttgtggaaagttagggttaagtatcttaccacatcgaaattaggtcttcctgaagatgcttttcttgttggagctttgctgtttg 2861028  T
Q  418 cagaccaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcggc 517  Q
     ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2861029 aagaccaccaaactttgactccattgaactcatcctcaatctcttctttgtcgtccatgctaaggacaagcggtgattggctatcttccacaacttcggc 2861128  T
Q  518 ttcaagtcgtttggctcgtttactcgagttcgcaccaa 555  Q
    || |||||  ||||||| || ||||||||| |||||||    
T  2861129 tttaagtctcttggctctttgactcgagttagcaccaa 2861166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 436; E-Value: 0
Query Start/End: Original strand, 21 - 555
Target Start/End: Original strand, 2866008 - 2866545
Alignment:
Q  21 atggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 120  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2866008 atggtagatttcccagttcctggtggaccatagagtagataaccgcgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 2866107  T
Q  121 taagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgcgcaaaatttgtgtgactccatcctgagatcca 220  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||    
T  2866108 caagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgcgcaaaatttgtgtgactccaccccgacatcca 2866207  T
Q  221 ccaacaaccgctattgttggtgtaaagctttagtcgcctattcttaaatataatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatg 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2866208 ccaacaaccgctattgttggtgtaaagctttagtcgcctattcttaaatataacagcctttccttggtccaacacatgttgtatgtaagaggaagtaatg 2866307  T
Q  321 agatcgcgatgccttttgtggaaagttagggtgaagcatcttaccacatcgaa---agatcttcctgaagatgcttttcttcttggagctttgctatttg 417  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||||||||   || |||||||||||||||||||||| ||||||||||||| ||||    
T  2866308 agatcgcgatgccttttgtggaaagttagggttaagtatcttaccacatcgaaattaggtcttcctgaagatgcttttcttgttggagctttgctgtttg 2866407  T
Q  418 cagaccaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcggc 517  Q
     ||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  2866408 aagaccaccaaactttgactccattgaactcatcctcaatctcttctttgtcgtccatgctaaggacaagcggtgattggctatcttccacaacttcggc 2866507  T
Q  518 ttcaagtcgtttggctcgtttactcgagttcgcaccaa 555  Q
    || |||||  ||||||| || ||||||||| |||||||    
T  2866508 tttaagtctcttggctctttgactcgagttagcaccaa 2866545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 148; E-Value: 8e-78
Query Start/End: Original strand, 21 - 208
Target Start/End: Original strand, 2910044 - 2910231
Alignment:
Q  21 atggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 120  Q
    ||||||||||| || ||||||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2910044 atggtagattttccggttcctggtggaccataaactagataaccacgtttccacgcctttccaactttagcataatactctttccctttcttgaatttaa 2910143  T
Q  121 taagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgcgcaaaatttgtgtgactcca 208  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  2910144 caagatcgtttatgatctcttccttcttctccggttccatagcaagtgtttcaaaccttgcagggtgctcaaaagttgtgtgactcca 2910231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 2842300 - 2842113
Alignment:
Q  21 atggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 120  Q
    ||||||||||| || |||||||| |||||| | ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2842300 atggtagatttaccggttcctggaggaccaaaaagtagataaccacgtttccaagcttttccaactttagcataatactctttccctttcttgaatttaa 2842201  T
Q  121 taagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgcgcaaaatttgtgtgactcca 208  Q
     |||||| ||||  |||||||||||||| |  ||||||| ||||||||||||||| ||||| |||||| ||||| |||||||||||||    
T  2842200 caagatcatttagaatctcttctttcttttttggttccaaagcaagtgtttcaaaacttgccgggtgctcaaaagttgtgtgactcca 2842113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 2833323 - 2833507
Alignment:
Q  24 gtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaataa 123  Q
    |||||||| ||||||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||    
T  2833323 gtagattttccagttcctggaggaccataaagtagataaccacgtttccaagcctttccaactttagcataatactctttacctttcttgaacttaagaa 2833422  T
Q  124 gatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtgcgcaaaatttgtgtgactcca 208  Q
    |||| ||||  ||||||| |||||| || ||||||||||| || ||| |||| |||||||| ||| ||||| |||||||| ||||    
T  2833423 gatcatttaaaatctcttgtttcttttctggttccatagctagggttccaaatcttgcaggatgctcaaaagttgtgtgattcca 2833507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 21 - 187
Target Start/End: Complemental strand, 14578038 - 14577872
Alignment:
Q  21 atggtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaa 120  Q
    ||||||||||| || |||||||| |||||  | |||| |||||| ||||||||||||||||||||||||||||| |||||||| |||  |||||| ||||    
T  14578038 atggtagattttccggttcctggaggaccgaaaagtaaataaccgcgtttccaagcctttccaactttagcatagtactctttacctgccttgaacttaa 14577939  T
Q  121 taagatcgtttatgatctcttctttcttctccggttccatagcaagtgtttcaaaccttgcagggtg 187  Q
     |||||||| ||| ||||||||||||||||  |  ||||||||||||||||| ||||||||||||||    
T  14577938 caagatcgtctattatctcttctttcttctttgcatccatagcaagtgtttcgaaccttgcagggtg 14577872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 256 - 362
Target Start/End: Complemental strand, 2842053 - 2841947
Alignment:
Q  256 gcctattcttaaatataatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgccttttgtggaaagttagggtgaa 355  Q
    |||||||||| | | | |||||||||||||| ||||| ||||||||||||||||||| ||| ||||| || ||||||||||| |||||||||||||| ||    
T  2842053 gcctattcttcattgttatagcctttccttgttccaaaacatgttgtatgtaagaggtagtgatgagttcacgatgccttttatggaaagttagggttaa 2841954  T
Q  356 gcatctt 362  Q
    | |||||    
T  2841953 gaatctt 2841947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 24 - 148
Target Start/End: Complemental strand, 2828939 - 2828815
Alignment:
Q  24 gtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataatactctttccctttcttgaatttaataa 123  Q
    |||||||| |||||||| || |||||| | ||||||||||| |||||||||||||| || ||||||| ||| |||||||| ||| | ||||| |||| ||    
T  2828939 gtagattttccagttccaggaggaccaaaaagtagataaccacgtttccaagccttcccgactttagtatagtactctttacctgttttgaacttaacaa 2828840  T
Q  124 gatcgtttatgatctcttctttctt 148  Q
    |||| ||||| || |||||||||||    
T  2828839 gatcatttataatttcttctttctt 2828815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 234 - 518
Target Start/End: Original strand, 2910271 - 2910558
Alignment:
Q  234 ttgttggtgtaaagctttagtcgcctattcttaaatataatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgcc 333  Q
    ||||| ||||||||||||||  |||| |||||   |  |||||  |||||||| || ||||||||||| ||||| |||| ||| |||||||| | |||||    
T  2910271 ttgttagtgtaaagctttagctgcctcttcttctgtgcaataggttttccttgttctaacacatgttggatgtacgaggtagtgatgagatcaccatgcc 2910370  T
Q  334 ttttgtggaaagttagggtgaagcatcttaccacatc-gaa--agatcttcctgaagatgcttttcttcttggagctttgctatttgcagaccaccaaac 430  Q
    |||||| ||| |||||||| | | |||||| |||||| |||  || |||||||||| || ||| |    |||||  | |||| ||||||||||||||||     
T  2910371 ttttgtcgaaggttagggttaggtatcttatcacatccgaattaggtcttcctgaaaattcttgtgccgttggaattgtgctgtttgcagaccaccaaat 2910470  T
Q  431 tttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcggct 518  Q
    || |||||| || || |||||   |||||||||||||||||| |||| || || || ||| | |||||||||||| ||||||| ||||    
T  2910471 ttcgactcctttaaaatcatcggtgatctcttcgttgtcgtctatgccaaagataaccggagtttggctatcttcgacaactttggct 2910558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 417 - 525
Target Start/End: Original strand, 2833731 - 2833839
Alignment:
Q  417 gcagaccaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcgg 516  Q
    |||| |||||||||||||||||||||||||||||||  ||| ||||| || || |||||||| |||||||| |||  |||||||||||  |||||||| |    
T  2833731 gcagtccaccaaactttgactccattgaactcatctatgatttcttcattatcatccatgcttaggacaagtgggttttggctatctttgacaacttcag 2833830  T
Q  517 cttcaagtc 525  Q
    ||| |||||    
T  2833831 ctttaagtc 2833839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 413 - 525
Target Start/End: Complemental strand, 2841893 - 2841781
Alignment:
Q  413 atttgcagaccaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaact 512  Q
    |||||| ||||||||||||||||| |||||||||||||||  |||||||| |||||| |||||||| || ||||| ||   |||||||||||  | ||||    
T  2841893 atttgctgaccaccaaactttgacaccattgaactcatctgtgatctcttggttgtcatccatgcttagaacaagtggattttggctatctttgataact 2841794  T
Q  513 tcggcttcaagtc 525  Q
    || |||| |||||    
T  2841793 tcagctttaagtc 2841781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 2833551 - 2833673
Alignment:
Q  240 gtgtaaagctttagtcgcctattcttaaatataatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgccttttgt 339  Q
    ||||||||||||||| ||||||||||    |||||||  |||||||  |||||||||||||| |||||||||| ||| ||||  || |||||| |||| |    
T  2833551 gtgtaaagctttagttgcctattcttgctcataatagattttccttcatccaacacatgttgaatgtaagaggtagtgatgacttcacgatgctttttat 2833650  T
Q  340 ggaaagttagggtgaagcatctt 362  Q
    |||| |||||||| ||| |||||    
T  2833651 ggaaggttagggttaagaatctt 2833673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 352
Target Start/End: Complemental strand, 2828712 - 2828594
Alignment:
Q  234 ttgttggtgtaaagctttagtcgcctattcttaaatataatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgcc 333  Q
    |||||||| |||||||| ||   ||||||||| ||| |||||||||||||||| || ||||||||||| || |||||   |||||| || || ||||       
T  2828712 ttgttggtataaagcttaagcttcctattcttcaatgtaatagcctttccttgttctaacacatgttggatataagacctagtaataagctcacgatatt 2828613  T
Q  334 ttttgtggaaagttagggt 352  Q
    |||||||||| ||||||||    
T  2828612 ttttgtggaaggttagggt 2828594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 272 - 349
Target Start/End: Complemental strand, 14577778 - 14577701
Alignment:
Q  272 aatagcctttccttggtccaacacatgttgtatgtaagaggaagtaatgagatcgcgatgccttttgtggaaagttag 349  Q
    |||||| |||||||  |||||||||| |||||||||||||| ||| |||||| | || | |||||||||||| |||||    
T  14577778 aatagcttttccttcatccaacacatattgtatgtaagaggtagtgatgagaccacggtaccttttgtggaaggttag 14577701  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 518
Target Start/End: Complemental strand, 2828544 - 2828448
Alignment:
Q  422 ccaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcggct 518  Q
    |||||||| ||||||||||||||| | ||||  ||||||||| || || || ||| |||||||||| || | ||| |||| ||| ||||||||||||    
T  2828544 ccaccaaattttgactccattgaatttatctatgatctcttcattatcatcaatggtaaggacaagtggagtttgactattttcgacaacttcggct 2828448  T

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Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 534
Target Start/End: Complemental strand, 14577649 - 14577537
Alignment:
Q  422 ccaccaaactttgactccattgaactcatcttcgatctcttcgttgtcgtccatgctaaggacaagcggggattggctatcttccacaacttcggcttca 521  Q
    |||||| ||||| ||||||||||| | |||   |||||| || |||||  ||||| | ||||||||||||| ||| |||| ||| |||||||| || | |    
T  14577649 ccaccatacttttactccattgaatttatcaatgatctcctcattgtcacccatggtgaggacaagcggggtttgactattttcgacaacttcagcatta 14577550  T
Q  522 agtcgtttggctc 534  Q
    |||| ||||||||    
T  14577549 agtcttttggctc 14577537  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 1800865 - 1800792
Alignment:
Q  24 gtagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaactttagcataata 97  Q
    |||||||| || |||||||| |||||||| |||| |||||| |||||||||||||| || | ||| ||||||||    
T  1800865 gtagatttacctgttcctggaggaccataaagtaaataaccgcgtttccaagccttaccgatttttgcataata 1800792  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 8043880 - 8043817
Alignment:
Q  25 tagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcctttccaacttt 88  Q
    ||||||||||||||||||| |||||||| |  | |||||| |||||||||||| | ||||||||    
T  8043880 tagatttcccagttcctggaggaccatacaacaaataaccacgtttccaagccctaccaacttt 8043817  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 77
Target Start/End: Complemental strand, 53395549 - 53395497
Alignment:
Q  25 tagatttcccagttcctggtggaccatagagtagataaccccgtttccaagcc 77  Q
    ||||||| ||||||||||| |||||||| || |||||||| | ||||||||||    
T  53395549 tagattttccagttcctggaggaccataaagaagataacctcttttccaagcc 53395497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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