View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4265_low_6 (Length: 423)

Name: NF4265_low_6
Description: NF4265
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4265_low_6
NF4265_low_6
[»] chr5 (7 HSPs)
chr5 (65-203)||(31407973-31408119)
chr5 (69-179)||(13921800-13921913)
chr5 (10-44)||(31408107-31408141)
chr5 (97-175)||(11100739-11100820)
chr5 (83-175)||(4221436-4221531)
chr5 (111-175)||(4379337-4379404)
chr5 (83-175)||(13156849-13156944)
[»] chr8 (6 HSPs)
chr8 (69-243)||(39746897-39747075)
chr8 (84-237)||(13969991-13970148)
chr8 (97-175)||(2855161-2855242)
chr8 (83-175)||(31688022-31688117)
chr8 (83-175)||(36112813-36112908)
chr8 (111-237)||(38780677-38780807)
[»] chr3 (6 HSPs)
chr3 (322-402)||(8136767-8136847)
chr3 (66-237)||(33897853-33898028)
chr3 (111-175)||(27446507-27446574)
chr3 (97-175)||(52868170-52868251)
chr3 (83-175)||(8872953-8873048)
chr3 (83-175)||(44748763-44748858)
[»] scaffold0016 (1 HSPs)
scaffold0016 (97-175)||(84335-84416)
[»] chr7 (9 HSPs)
chr7 (67-175)||(35000792-35000903)
chr7 (66-179)||(27869525-27869641)
chr7 (83-175)||(17192422-17192517)
chr7 (70-121)||(24170920-24170971)
chr7 (83-175)||(19831970-19832065)
chr7 (111-175)||(33203676-33203743)
chr7 (83-175)||(36436233-36436328)
chr7 (83-175)||(42375763-42375858)
chr7 (83-175)||(47587085-47587180)
[»] chr1 (10 HSPs)
chr1 (83-237)||(44718928-44719086)
chr1 (83-175)||(13121541-13121636)
chr1 (83-175)||(25602069-25602164)
chr1 (111-174)||(2028961-2029027)
chr1 (83-175)||(7710911-7711006)
chr1 (83-175)||(17046812-17046907)
chr1 (111-175)||(26843834-26843901)
chr1 (83-175)||(38967421-38967516)
chr1 (111-179)||(39583175-39583246)
chr1 (83-179)||(42963907-42964006)
[»] chr4 (14 HSPs)
chr4 (97-175)||(20148789-20148870)
chr4 (85-175)||(42085697-42085790)
chr4 (192-268)||(3932322-3932395)
chr4 (70-175)||(20511485-20511593)
chr4 (192-268)||(42124745-42124818)
chr4 (130-179)||(43078216-43078268)
chr4 (111-175)||(4355593-4355660)
chr4 (83-175)||(31679045-31679140)
chr4 (83-175)||(33005081-33005176)
chr4 (83-175)||(37115256-37115351)
chr4 (95-179)||(38048862-38048949)
chr4 (83-175)||(55495853-55495948)
chr4 (103-179)||(55829076-55829155)
chr4 (103-174)||(35580938-35581012)
[»] scaffold0343 (1 HSPs)
scaffold0343 (97-175)||(9309-9390)
[»] chr6 (4 HSPs)
chr6 (100-241)||(6104660-6104805)
chr6 (111-175)||(15591151-15591218)
chr6 (83-175)||(23648273-23648368)
chr6 (83-175)||(31099987-31100082)
[»] chr2 (7 HSPs)
chr2 (70-144)||(6807504-6807578)
chr2 (83-175)||(4385494-4385589)
chr2 (97-144)||(33850107-33850154)
chr2 (83-168)||(13351573-13351660)
chr2 (83-175)||(5039852-5039947)
chr2 (128-175)||(38842912-38842962)
chr2 (99-170)||(41877821-41877895)
[»] scaffold1360 (1 HSPs)
scaffold1360 (192-268)||(1317-1390)


Alignment Details
Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 65 - 203
Target Start/End: Complemental strand, 31408119 - 31407973
Alignment:
Q  65 ctggattttatataaagaaataagggtagtattggaagaaaaaataataag------ttataaacttagacgctacttgaaatagc---tgacaaatagt 155  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||||      |||||| |||| |||||| ||| ||||||   ||||||||||     
T  31408119 ctggattttagataaagtaataagggtagtattggaagaaaaa-taataagctatagttataatcttaaacgctaattggaatagcgtctgacaaatagc 31408021  T
Q  156 ttataaactcgtgaaataagttattacgacgtgctgaaaaacactatc 203  Q
    |||||| |||||||||||||||||||   |||||||||||||||||||    
T  31408020 ttataagctcgtgaaataagttattaactcgtgctgaaaaacactatc 31407973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 69 - 179
Target Start/End: Complemental strand, 13921913 - 13921800
Alignment:
Q  69 attttatataaagaaataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactc 165  Q
    |||||| |||||  ||||||| ||  ||| ||||||||||| |||||||||||  | | ||||||||||||||||   |||| |||||| || ||| |||    
T  13921913 attttagataaaacaataaggataaaattagaagaaaaaatgataagttataagttcaaacgctacttgaaatagcgtctgaaaaatagcttttaagctc 13921814  T
Q  166 gtgaaataagttat 179  Q
    ||||||||||||||    
T  13921813 gtgaaataagttat 13921800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 44
Target Start/End: Complemental strand, 31408141 - 31408107
Alignment:
Q  10 attatactcctaaagggtaaaactggattttagat 44  Q
    |||||||||||||||||||||||||||||||||||    
T  31408141 attatactcctaaagggtaaaactggattttagat 31408107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 11100739 - 11100820
Alignment:
Q  97 tggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||||| ||||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  11100739 tggaagaaaaaatgataagctataagctcaaacgctacttggaatagcgtctgaaaaatagcttataagctcgtgaaataag 11100820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 4221436 - 4221531
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  4221436 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 4221531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 4379404 - 4379337
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  4379404 ataagttataagctcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 4379337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 13156849 - 13156944
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatagct---gacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | | |||||||| |||||||   || |||||| ||||||||||||||||||||    
T  13156849 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaaagctacttggaatagcttctgaaaaatagcttataaactcgtgaaataag 13156944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 69 - 243
Target Start/End: Original strand, 39746897 - 39747075
Alignment:
Q  69 attttatataaagaaataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactc 165  Q
    |||||| |||||  ||||||||||  ||||||||||||||| ||||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||    
T  39746897 attttagataaaacaataagggtaaaattggaagaaaaaattataagctataagctcaaacgctacttggaatagcatctgaaaaatagcttataagctc 39746996  T
Q  166 gtgaaataagttattacgacgtgctg-aaaaacactatcaaacatagcttttttgatcaaacaagcgtataagttattc 243  Q
    |||||||||||||| |   |||| || ||||||| || |||||| |||||||||| |||||| ||| |||||| |||||    
T  39746997 gtgaaataagttataagctcgtggtgaaaaaacattaccaaacagagcttttttggtcaaacgagcttataagctattc 39747075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 237
Target Start/End: Complemental strand, 13970148 - 13969991
Alignment:
Q  84 ataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataagttatt 180  Q
    |||||||||  | |||||||||| || ||||| ||||| || | |||||||||  ||||||   ||| |||||| |||||| ||||||||||||| |||     
T  13970148 ataagggtaaaaatggaagaaaatatgataagctataagctcaaacgctacttcgaatagcgtctgaaaaatagcttataagctcgtgaaataagctata 13970049  T
Q  181 acgacgtgctgaaaa-acactatcaaacatagcttttttgatcaaacaagcgtataag 237  Q
    |   |||| |||||| ||| || |||||| ||||||||||||||||| ||| ||||||    
T  13970048 agctcgtggtgaaaagacagtaccaaacagagcttttttgatcaaacgagcttataag 13969991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 2855242 - 2855161
Alignment:
Q  97 tggaagaaaaaataataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataag 175  Q
    |||| |||||||||||||| ||||| || | ||||||||||||||| |   ||| |||||| |||||| |||||||||||||    
T  2855242 tggaggaaaaaataataagctataagctcaaacgctacttgaaataacttttgaaaaatagcttataagctcgtgaaataag 2855161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 31688022 - 31688117
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  31688022 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 31688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 36112813 - 36112908
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  36112813 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 36112908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 38780807 - 38780677
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataagttattacgacgtgctgaaaaa-cactatcaaa 206  Q
    ||||| ||||| || | |||||||||| ||||||   ||| ||||||||||||| ||||| ||||||||||| |   |||| ||||||| || | |||||    
T  38780807 ataagctataagctcaaacgctacttggaatagcgtctgaaaaatagtttataagctcgtaaaataagttataagttcgtggtgaaaaatcattgtcaaa 38780708  T
Q  207 catagcttttttgatcaaacaagcgtataag 237  Q
    || | ||||||| ||||||| ||| ||||||    
T  38780707 cagaactttttttatcaaacgagcttataag 38780677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 8136847 - 8136767
Alignment:
Q  322 tggtcgttagaattcacctttatttttagtgaataagtgaaatgtctgaagttcgaatcccggctcttgtatataacaatg 402  Q
    |||| |||| |||||||||||||||||||||||||||||| |||| |||| ||||||  ||||| | ||||||||||||||    
T  8136847 tggtagttaaaattcacctttatttttagtgaataagtgagatgtttgaaattcgaactccggcccctgtatataacaatg 8136767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 33897853 - 33898028
Alignment:
Q  66 tggattttatataaagaaataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaa 162  Q
    ||||||||| |||||  ||||||||||  || |||||||||||| |||||||||||  | | |||||| ||| |||||   |||| |||||| ||||||     
T  33897853 tggattttagataaaataataagggtacaataggaagaaaaaatgataagttataagttcaaacgctatttggaatagcgtctgaaaaatagcttataag 33897952  T
Q  163 ctcgtgaaataagttattacgacgtgctgaaaa-acactatcaaacatagcttttttgatcaaacaagcgtataag 237  Q
    || |||||||||| ||| |   |||| |||||| ||| || |||||| ||||||||| ||||||| ||| ||||||    
T  33897953 cttgtgaaataagctataagctcgtggtgaaaagacattaccaaacagagctttttttatcaaacgagcttataag 33898028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 27446574 - 27446507
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    |||||||||||||| |||||||| |||||||||   |||| ||||||  |||||||||||||||||||    
T  27446574 ataagttataaactcagacgctatttgaaatagcttctgaaaaatagcatataaactcgtgaaataag 27446507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 52868170 - 52868251
Alignment:
Q  97 tggaagaaaaaataataagttataaacttagacgctacttgaaatagctg---acaaatagtttataaactcgtgaaataag 175  Q
    |||||||||||| |||||||||||| || | || |||||||||||||||    | |||||| |||||| |||||||||||||    
T  52868170 tggaagaaaaaacaataagttataagctcaaacactacttgaaatagcttctcaaaaatagcttataagctcgtgaaataag 52868251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 8873048 - 8872953
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  |||| |||||||| | | ||| ||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  8873048 aataagggtaaaattgaaagaaaaagtgagaagctataagctcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 8872953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 44748763 - 44748858
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  44748763 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 44748858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 84416 - 84335
Alignment:
Q  97 tggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||||| ||||||||||| || | ||||||||||||||||   |||| ||||||||||||| |||||||||||||    
T  84416 tggaagaaaaaatgataagttataagctcaaacgctacttgaaatagcttctgaaaaatagtttataagctcgtgaaataag 84335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 175
Target Start/End: Complemental strand, 35000903 - 35000792
Alignment:
Q  67 ggattttatataaagaaataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaac 163  Q
    |||||| | |||||| ||||||||||  | |||||||||||| |||||| ||||| || | |||||||||| |||||   |||| |||||||||||||||    
T  35000903 ggatttcagataaagtaataagggtaaaagtggaagaaaaaacaataagctataagctcaaacgctacttggaatagcatctgaaaaatagtttataaac 35000804  T
Q  164 tcgtgaaataag 175  Q
    | ||||||||||    
T  35000803 ttgtgaaataag 35000792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 66 - 179
Target Start/End: Original strand, 27869525 - 27869641
Alignment:
Q  66 tggattttatataaagaaataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaata---gctgacaaatagtttataaa 162  Q
    |||| |||| |||||  |||||||||| || |||||||||||| |||||| |||||||| | |||||||||| ||||    | || |||||| ||||||     
T  27869525 tggaatttagataaaataataagggtaataatggaagaaaaaacaataagctataaactcaaacgctacttggaataacgtccgaaaaatagcttataag 27869624  T
Q  163 ctcgtgaaataagttat 179  Q
    |||||||||||||||||    
T  27869625 ctcgtgaaataagttat 27869641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 17192422 - 17192517
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  17192422 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 17192517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 121
Target Start/End: Complemental strand, 24170971 - 24170920
Alignment:
Q  70 ttttatataaagaaataagggtagtattggaagaaaaaataataagttataa 121  Q
    ||||| |||||| ||||||||||||||||||||||||| | ||||| |||||    
T  24170971 ttttagataaagtaataagggtagtattggaagaaaaagtgataagctataa 24170920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 19831970 - 19832065
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| ||||||   ||| |||||| |||||| |||||||||||||    
T  19831970 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttttgaaaaatagcttataagctcgtgaaataag 19832065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 33203676 - 33203743
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  33203676 ataagttataagctcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 33203743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 36436328 - 36436233
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||||||||| || | |||||| ||| |||||   |||| |||||| |||||| |||||||||||||    
T  36436328 aataagggtaaaattggaagaaaaagtgagaagttataagctcaaacgctatttggaatagcttctgaaaaatagcttataagctcgtgaaataag 36436233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 42375763 - 42375858
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  42375763 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 42375858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 47587085 - 47587180
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  47587085 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 47587180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 44718928 - 44719086
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataagttat 179  Q
    ||||||||||  |||| |||||||| | | ||||||||| |||| ||||||||||||||||   |||| ||||||||||||| ||||| ||||||| |||    
T  44718928 aataagggtaaaattgaaagaaaaagtgagaagttataagcttaaacgctacttgaaatagcgtctgaaaaatagtttataagctcgtaaaataagctat 44719027  T
Q  180 tacgacgtgctgaaaa-acactatcaaacatagcttttttgatcaaacaagcgtataag 237  Q
     |   |||| |||||| ||| || |||||| |||||||||   ||||||||| ||||||    
T  44719028 aagctcgtggtgaaaagacattaccaaacagagctttttttgccaaacaagcttataag 44719086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 13121541 - 13121636
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | ||||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  13121541 aataagggtaaaattggaagaaaaagtgataagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 13121636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 25602164 - 25602069
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  25602164 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 25602069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 2028961 - 2029027
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataa 174  Q
    ||||||||||| |||| ||| |||||||||||||   ||| ||||||||||||||||||| ||||||    
T  2028961 ataagttataatcttaaacggtacttgaaatagcgtctgaaaaatagtttataaactcgttaaataa 2029027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 7710911 - 7711006
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  7710911 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 7711006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 17046907 - 17046812
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  17046907 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 17046812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 26843901 - 26843834
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||| |||||||| | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  26843901 ataagctataaactcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 26843834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 38967421 - 38967516
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  38967421 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 38967516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 179
Target Start/End: Complemental strand, 39583246 - 39583175
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatagct---gacaaatagtttataaactcgtgaaataagttat 179  Q
    ||||| |||||||| | |||||||||| |||||||   || |||||| |||||||||||| |||||||||||    
T  39583246 ataaggtataaactcaaacgctacttggaatagcttctgaaaaatagcttataaactcgttaaataagttat 39583175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 179
Target Start/End: Complemental strand, 42964006 - 42963907
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatagctg---acaaatagtttataaactcgtgaaataagttat 179  Q
    ||||||||||  | |||||||||||| |||||| | ||| || | ||||||||||||||||||    | |||||| |||||||||||| |||||| ||||    
T  42964006 aataagggtaaaagtggaagaaaaaacaataagctgtaagctcaaacgctacttgaaatagcttctcaaaaatagcttataaactcgtaaaataaattat 42963907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 175
Target Start/End: Original strand, 20148789 - 20148870
Alignment:
Q  97 tggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||||| ||||||||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  20148789 tggaagaaaaaatgataagttataagctcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 20148870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 42085697 - 42085790
Alignment:
Q  85 taagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||  |||| |||||||||| ||||| ||||| || | ||||||||||||||||   |||| ||| || |||||| |||||||||||||    
T  42085697 taagggtaaaattgaaagaaaaaatgataagctataagctcaaacgctacttgaaatagcgtctgaaaaaaagcttataagctcgtgaaataag 42085790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 3932322 - 3932395
Alignment:
Q  192 aaaaacactatcaaacatagcttttttgatcaaacaagcgtataagttattctatgttataagctcgttttttggtc 268  Q
    ||||||| || |||||| ||||||||||||||||| ||| |||||| |||||   | ||||||||| ||||||||||    
T  3932322 aaaaacattaccaaacagagcttttttgatcaaacgagcttataagctattc---gctataagctcattttttggtc 3932395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 20511593 - 20511485
Alignment:
Q  70 ttttatataaagaaataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcg 166  Q
    ||||| |||||  ||||||||||  | |||||||||| || ||||||||||| || | |||||||||| |||||   |||| |||||| |||||| |||     
T  20511593 ttttagataaaataataagggtataaatggaagaaaagatgataagttataagctcaaacgctacttggaatagcgtctgaaaaatagcttataagctca 20511494  T
Q  167 tgaaataag 175  Q
    |||||||||    
T  20511493 tgaaataag 20511485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 42124745 - 42124818
Alignment:
Q  192 aaaaacactatcaaacatagcttttttgatcaaacaagcgtataagttattctatgttataagctcgttttttggtc 268  Q
    ||||||| || ||||||||||||||||| |||||| ||| |||||| |||||   | ||||||||| ||||||||||    
T  42124745 aaaaacattaccaaacatagcttttttggtcaaacgagcttataagctattc---gctataagctctttttttggtc 42124818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 179
Target Start/End: Original strand, 43078216 - 43078268
Alignment:
Q  130 gctacttgaaatagc---tgacaaatagtttataaactcgtgaaataagttat 179  Q
    |||||||||||||||   ||| ||||||||||||| |||||||||||||||||    
T  43078216 gctacttgaaatagcgtctgaaaaatagtttataagctcgtgaaataagttat 43078268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 4355593 - 4355660
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  4355593 ataagttataagctcaaacgctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 4355660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 31679140 - 31679045
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| ||||||   ||| |||||| |||||| |||||||||||||    
T  31679140 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttttgaaaaatagcttataagctcgtgaaataag 31679045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 33005081 - 33005176
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatagct---gacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | ||| |||||| |||||||   || |||||| ||||||||||||||||||||    
T  33005081 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgttacttggaatagcttctgaaaaatagcttataaactcgtgaaataag 33005176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 37115256 - 37115351
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  37115256 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 37115351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 95 - 179
Target Start/End: Original strand, 38048862 - 38048949
Alignment:
Q  95 attggaagaaaaaataataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataagttat 179  Q
    |||| ||||| |||| ||||| |||||||| | | |||| ||| ||||||   ||| |||||||||||||||||||||||||| ||||    
T  38048862 attgaaagaagaaatgataagctataaactcaaatgctatttggaatagcgtctgaaaaatagtttataaactcgtgaaataaattat 38048949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 55495853 - 55495948
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  55495853 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 55495948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 179
Target Start/End: Complemental strand, 55829155 - 55829076
Alignment:
Q  103 aaaaaataataagttataaacttagacgctacttgaaatagct---gacaaatagtttataaactcgtgaaataagttat 179  Q
    ||||||| | ||| ||||| || | |||||||||| |||||||   || ||||||||||||| |||||||||||||||||    
T  55829155 aaaaaatgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagtttataagctcgtgaaataagttat 55829076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 35580938 - 35581012
Alignment:
Q  103 aaaaaataataagttataaacttagacgctacttgaaatagc---tgacaaatagtttataaactcgtgaaataa 174  Q
    ||||||| | ||| ||||| || | |||||||||||||||||   ||| ||||||||||||| ||||||||||||    
T  35580938 aaaaaatgagaagctataagctcaaacgctacttgaaatagcctctgaaaaatagtttataagctcgtgaaataa 35581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 175
Target Start/End: Complemental strand, 9390 - 9309
Alignment:
Q  97 tggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||||| ||||| ||||| || | || |||||||||||||   |||| ||||||||||||| |||||||||||||    
T  9390 tggaagaaaaaatgataagctataagctcaaacactacttgaaatagcttctgaaaaatagtttataagctcgtgaaataag 9309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000004; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 100 - 241
Target Start/End: Original strand, 6104660 - 6104805
Alignment:
Q  100 aagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataagttattacgacgtgctgaaa-a 195  Q
    |||||||||| ||||| ||||| || | ||||||||||||||||   |||| |||||| |||||| |||| |||||||| ||| |   |||| ||||| |    
T  6104660 aagaaaaaatgataagctataagctcaaacgctacttgaaatagtatctgaaaaatagcttataagctcgcgaaataagctataagctcgtggtgaaaga 6104759  T
Q  196 acactatcaaacatagcttttttgatcaaacaagcgtataagttat 241  Q
     || || |||||| |||||||||| |||||| ||| ||||||||||    
T  6104760 ccattaccaaacagagcttttttggtcaaacgagcttataagttat 6104805  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 111 - 175
Target Start/End: Original strand, 15591151 - 15591218
Alignment:
Q  111 ataagttataaacttagacgctacttgaaatagct---gacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||| || | |||||||||||| |||||   || ||||||||||||| |||||||||||||    
T  15591151 ataagttataagctcaaacgctacttgaagtagcttctgaaaaatagtttataagctcgtgaaataag 15591218  T

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Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 23648368 - 23648273
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  | ||||| |||| |||| ||| ||||| || ||| ||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  23648368 aataagggtaaaaatggaacaaaagataaaaagctataagctcagaagctacttgaaatagcttctgaaaaatagcttataagctcgtgaaataag 23648273  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 31099987 - 31100082
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  31099987 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 31100082  T

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Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 6807578 - 6807504
Alignment:
Q  70 ttttatataaagaaataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatagc 144  Q
    ||||| |||||  ||||||||||  ||||||||||||||| ||||| ||||| || | |||||||||||||||||    
T  6807578 ttttagataaaataataagggtaaaattggaagaaaaaatgataagctataagctcaaacgctacttgaaatagc 6807504  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 83 - 175
Target Start/End: Original strand, 4385494 - 4385589
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | ||||||||||||||||   |||| |||||| |||||| |||||||||||||    
T  4385494 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttgaaatagtttctgaaaaatagcttataagctcgtgaaataag 4385589  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 97 - 144
Target Start/End: Original strand, 33850107 - 33850154
Alignment:
Q  97 tggaagaaaaaataataagttataaacttagacgctacttgaaatagc 144  Q
    |||||||||||| |||||| |||||||| | |||||||||||||||||    
T  33850107 tggaagaaaaaacaataagctataaactcaaacgctacttgaaatagc 33850154  T

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Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 83 - 168
Target Start/End: Original strand, 13351573 - 13351660
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtg 168  Q
    ||||||||||  |||| |||||||||||| ||| ||||| || | ||||||||||||||||   |||| |||||| |||||||||||||    
T  13351573 aataagggtaaaattgaaagaaaaaataagaagctataagctcaaacgctacttgaaatagcgtctgaaaaatag-ttataaactcgtg 13351660  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 5039947 - 5039852
Alignment:
Q  83 aataagggtagtattggaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||  ||||||||||||| | | ||| ||||| || | |||||||||| |||||   |||| |||||| |||||| |||||||||||||    
T  5039947 aataagggtaaaattggaagaaaaagtgagaagctataagctcaaacgctacttggaatagcttctgaaaaatagcttataagctcgtgaaataag 5039852  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 128 - 175
Target Start/End: Complemental strand, 38842962 - 38842912
Alignment:
Q  128 acgctacttgaaatagct---gacaaatagtttataaactcgtgaaataag 175  Q
    ||||||||||||||||||   || ||||||||||||| |||||||||||||    
T  38842962 acgctacttgaaatagcttctgaaaaatagtttataagctcgtgaaataag 38842912  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 41877895 - 41877821
Alignment:
Q  99 gaagaaaaaataataagttataaacttagacgctacttgaaatag---ctgacaaatagtttataaactcgtgaa 170  Q
    ||||||||||| ||||| ||||| || | || |||||||||||||   |||| ||||||||||||| ||||||||    
T  41877895 gaagaaaaaatgataagctataagctcaaacactacttgaaatagcttctgaaaaatagtttataagctcgtgaa 41877821  T

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Target: scaffold1360 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 1317 - 1390
Alignment:
Q  192 aaaaacactatcaaacatagcttttttgatcaaacaagcgtataagttattctatgttataagctcgttttttggtc 268  Q
    ||||||| || |||||| ||||||||||||||||| ||| |||||| |||||   | ||||||||| ||||||||||    
T  1317 aaaaacattaccaaacagagcttttttgatcaaacgagcttataagctattc---gctataagctcattttttggtc 1390  T

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