View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4266_low_21 (Length: 312)
Name: NF4266_low_21
Description: NF4266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4266_low_21 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 299; Significance: 1e-168; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 2 - 312
Target Start/End: Original strand, 10547347 - 10547657
Alignment:
| Q |
2 |
acatctgcagggaaagaatcacatatctgagtaggatatgaactttttcttgtggaactccgacgataactaaaattgagccattgctcttcatgaatat |
101 |
Q |
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| T |
10547347 |
acatctgcagggaaagaatcacatatctgagtaggatatgaactttttcttgtggaactccgacgataactaaaattgagccattgctcttcatgaatat |
10547446 |
T |
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| Q |
102 |
cccacctaagtctcgcatctctcctctgaattttatttctagcctcctccatcttttcgatctgaccagtgtataacatgtacctctctgaaacgggtga |
201 |
Q |
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| T |
10547447 |
cccaccaaagtctcgcatctcttctctgaattttatttctagcctcctccatcttttcgatctgaccagtgtataacatgtacctctctgaaacgggtga |
10547546 |
T |
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| Q |
202 |
tttggcagggtcgacgagtcccgaaatccaaatgttgcgtagctgttgctccttggagtgcttgatgcatgccgcagagaagtgacggaggtggaaagtg |
301 |
Q |
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| T |
10547547 |
tttggcagggtcgacgagtcccgaaatccaaatgttgcgtagctgttgctccttggaatgcttgatgcatgccgcagagaagtgacggaggtggaaagtg |
10547646 |
T |
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| Q |
302 |
gaggagacaga |
312 |
Q |
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| T |
10547647 |
gaggagacaga |
10547657 |
T |
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